BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003575
(810 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224082486|ref|XP_002306711.1| predicted protein [Populus trichocarpa]
gi|222856160|gb|EEE93707.1| predicted protein [Populus trichocarpa]
Length = 810
Score = 1454 bits (3765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 675/810 (83%), Positives = 749/810 (92%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGR+EPVRFDKITARLKKLSYGLS +HCDPVLVAQKVCAGVY+GVTTTQLDELA
Sbjct: 1 MYVIKRDGRQEPVRFDKITARLKKLSYGLSNDHCDPVLVAQKVCAGVYRGVTTTQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT NHPDYALLA R++VS LHK TK SFSETI+ MYN NK SG+KA L+ADDV
Sbjct: 61 AETAASMTANHPDYALLAARISVSRLHKNTKKSFSETIELMYNNLNKGSGQKAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKNA LD I+YDRDF++DYFGFKTLERSYLLK+D ++VERPQH+LMRV+VGIHK
Sbjct: 121 YEIIMKNAERLDSEILYDRDFEYDYFGFKTLERSYLLKVDGKIVERPQHLLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA KTYHLMSQ WFTHATPTLFNAGT QPQLSSCFLLCMKDDSIEGIYDTLK+CA+
Sbjct: 181 DDIESATKTYHLMSQSWFTHATPTLFNAGTAQPQLSSCFLLCMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+++HNI A+GSYI GTNG+SNGIVPML+VFN+TARYVDQGGGKRKGAFAIY
Sbjct: 241 ISKLAGGIGIAVHNIHATGSYIRGTNGTSNGIVPMLRVFNNTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLF ALW+PDLFMERVR D KWSLFCPS+A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFLALWIPDLFMERVRGDDKWSLFCPSEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY+QYE E RAK +ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL
Sbjct: 361 DCWGQEFEKLYTQYEREDRAKKIISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTE++EF+SP ETAVCNLAS+ALPR+V E+GVP +S SK+VGSR+SKNR F
Sbjct: 421 GTIKSSNLCTEVIEFTSPTETAVCNLASVALPRFVMERGVPAESQSSKMVGSRESKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+LAEVT IT NLNKIIDVN+YP+ET RRSNLRHRPIGIG+QGLADTFILLG+PF+S
Sbjct: 481 DFEKLAEVTTTITANLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LNKDIFETIYYHAL++S+ELA KDGPYETY GSP+SKGILQ+DMW +TPSDRWDW
Sbjct: 541 SEAKRLNKDIFETIYYHALRSSSELAAKDGPYETYCGSPVSKGILQMDMWGVTPSDRWDW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LREMISK+GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+V+NKHL
Sbjct: 601 DALREMISKSGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVMNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+GLWS LK KII E+GSVSKI EIPE+LKAIYKTVWEIKQKTLVDMAADRGCY
Sbjct: 661 LNDLTEMGLWSPVLKNKIINESGSVSKIPEIPEQLKAIYKTVWEIKQKTLVDMAADRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHMEQPD GKLTSLHF+AWSKG+KTGMYYLRTRAAADAIKFTVDT+VLNNE
Sbjct: 721 IDQSQSLNIHMEQPDLGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTVLNNEN 780
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
AN+A++DV +++AQ CSL+N+EECMACGS
Sbjct: 781 ANKAEDDVNSDMAQAACSLQNREECMACGS 810
>gi|255566650|ref|XP_002524309.1| ribonucleoside-diphosphate reductase large chain, putative [Ricinus
communis]
gi|223536400|gb|EEF38049.1| ribonucleoside-diphosphate reductase large chain, putative [Ricinus
communis]
Length = 810
Score = 1424 bits (3686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/810 (83%), Positives = 745/810 (91%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDG +E V FDKITARLKKLSYGL+ E+CDPVLVAQKVC+G YKGVTTTQLDELA
Sbjct: 1 MYVIKRDGHQETVHFDKITARLKKLSYGLNSEYCDPVLVAQKVCSGFYKGVTTTQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA+LA RVAVSNLHK TK SFSETIK MY++ NKRSG+KASL+ADDV
Sbjct: 61 AETAAAMTTNHPDYAILAARVAVSNLHKNTKKSFSETIKLMYSHINKRSGQKASLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKNA LD IIYDRDFD+DYFGFKTLERSYLLK+D ++VERPQHMLMRV++GIHK
Sbjct: 121 YEIIMKNATRLDSEIIYDRDFDYDYFGFKTLERSYLLKIDGKIVERPQHMLMRVAIGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA+KTYHLM+Q WFTHATPTLFNAGTPQPQLSSCFL CMKDDSIEGI+DTLK+CA+
Sbjct: 181 DDVESAVKTYHLMAQRWFTHATPTLFNAGTPQPQLSSCFLGCMKDDSIEGIFDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLS+HN+RA+GS+I GTNG SNGIVPML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISKVAGGIGLSVHNVRATGSFICGTNGESNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFYALW+PDLFMERVR DG WSLFCP++A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEERRARDLFYALWIPDLFMERVRGDGSWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY+ YE+ RAK VI ARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL
Sbjct: 361 DCWGEEFEKLYTFYEDGDRAKKVIPARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTE++EF+SP ETAVCNLASIALPR+VRE+GVP+ S+ SKLVGSRDSK R F
Sbjct: 421 GTIKSSNLCTEVIEFTSPTETAVCNLASIALPRFVRERGVPIGSHSSKLVGSRDSKTRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +LAE+T IT NLNKIID+N+YP++T RRSNLRHRP+GIG+QGLADTFILLG+PF+S
Sbjct: 481 DFAKLAEITVTITANLNKIIDINYYPVDTARRSNLRHRPMGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQQLNKDIFETIYYHALK+S+ELA DGPYETY GSP+SKGILQ+DMW + PSDRWDW
Sbjct: 541 LEAQQLNKDIFETIYYHALKSSSELAAIDGPYETYKGSPVSKGILQMDMWGVIPSDRWDW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ LREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 NVLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+GLWSHALK KIIYENGSV+K+ EIPE+LKAIYKTVWEIKQKTLVDMA RGCY
Sbjct: 661 LHDLTEIGLWSHALKNKIIYENGSVAKVPEIPEQLKAIYKTVWEIKQKTLVDMAVARGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+QPD GKLTSLHFYAWSKG+KTGMYYLRTRAAADAIKFTVDTSVL +E
Sbjct: 721 IDQSQSLNIHMDQPDLGKLTSLHFYAWSKGLKTGMYYLRTRAAADAIKFTVDTSVLKHEN 780
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
N ++ V+ ++AQ+VCSL+N+EECMACGS
Sbjct: 781 VNSTNDYVDTDMAQMVCSLRNREECMACGS 810
>gi|40850562|gb|AAR95994.1| putative ribonucleotide reductase large subunit [Musa acuminata]
Length = 810
Score = 1413 bits (3658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 664/810 (81%), Positives = 747/810 (92%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR E V FDKITARLKKLSYGL++EHCDPVLVAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRPEAVHFDKITARLKKLSYGLTQEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA LA R+ VSNLHK TK SFSETIK MY+++N+RSG++A L+ADDV
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTKKSFSETIKLMYHHFNERSGQEAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKNAA LD IIYDRDFD+DYFGFKTLERSYLLK+ VVERPQHMLMRV+VGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVSGMVVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD S ++TYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMK+DSIEGIYDTLK+CAI
Sbjct: 181 DDIKSVIRTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKEDSIEGIYDTLKECAI 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S+HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD++EFL+LRKN GKEE RARDLFYALW+PDLFMERV+ +G+WSLFCP++A GLA
Sbjct: 301 LEPWHADMYEFLELRKNHGKEEHRARDLFYALWIPDLFMERVQSNGQWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY +YE+EG+AK V++A+ LWFEIL SQIETGTPYMLFKD+CNRKSNQQNL
Sbjct: 361 DCWGDEFEKLYLKYEDEGKAKKVVAAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP ETAVCNLASIALPR+VREKGVP++S+ S+LVGS SKNR F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPLESHPSRLVGSSGSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT IITENLNKIIDVN+YP+ET RRSNLRHRPIGIG+QGLADTFILLG+PF+S
Sbjct: 481 DFDKLGEVTAIITENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNKDIFETIYYHALK+S+E+A+ GPYETY GSP+SKGILQ DMWN+T SDRWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKSSSEIAISSGPYETYQGSPVSKGILQPDMWNVTLSDRWDW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++LREMISKNGVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 AALREMISKNGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+GLWS ALK KIIYE+GSV KI EIP+ LKAIYKTVWEIKQ+TLVDMA DRGCY
Sbjct: 661 LHDLTEMGLWSPALKNKIIYEDGSVLKIPEIPDNLKAIYKTVWEIKQRTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+QP+ GKLTSLHFYAWSKG+KTGMYYLR+RAAADAIKFTVDTS+L
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSLLQKTT 780
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
D+DVEA +AQVVCSL+N+EECMACGS
Sbjct: 781 KPVEDDDVEAKMAQVVCSLENREECMACGS 810
>gi|225438479|ref|XP_002278202.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Vitis vinifera]
gi|296082544|emb|CBI21549.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 1409 bits (3648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 665/810 (82%), Positives = 744/810 (91%), Gaps = 2/810 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS +HCDPVLV+QKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQESVHFDKITARLKKLSYGLSIDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA LA R+ VSNLHK TK SFSETIK+MYN++N+RSG KA L+A DV
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTKKSFSETIKEMYNHFNERSGLKAPLIAADV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKNAA LD IIYDRDFD+DYFGFKTLERSYLLK+ +VVERPQHMLMRVSVGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKIQGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DSA+KTYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIYDTLK+CA+
Sbjct: 181 DDIDSAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S+HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFYALWVPDLFMERV+ +G WSLFCP++A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGHWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EF LY+QYE EG+AK V+ A+ LWFE+L SQIETGTPYMLFKDSCN+KSNQQNL
Sbjct: 361 DCWGQEFVDLYTQYEREGKAKKVVQAQNLWFEVLKSQIETGTPYMLFKDSCNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++S +ETAVCNLASIALPRYVREKGVP++SN SKLVGSR SKNR F
Sbjct: 421 GTIKSSNLCTEIIEYTSADETAVCNLASIALPRYVREKGVPMESNPSKLVGSRGSKNRFF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVT I+T NLNKIIDVN+YP+ET +RSNLRHRPIG+G+QGLADTFILLG+ F+S
Sbjct: 481 DFDKLAEVTAIVTSNLNKIIDVNYYPVETAKRSNLRHRPIGLGVQGLADTFILLGMAFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNKDIFETIYYHALKAS ELA+++GPYETY G P+SKGILQ DMW +TPS RWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASCELAMREGPYETYDGCPVSKGILQPDMWGVTPSSRWDW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+MIS+NG+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 DALRKMISENGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+GLWS LK +IIYENGSV K+SEIPE+LK IY+TVWEIKQKTLVDMA DRGCY
Sbjct: 661 LHDLTEMGLWSPTLKNQIIYENGSVLKMSEIPEDLKVIYRTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+QP+ GKLTSLHFYAWSKG+KTGMYYLR+RAAADAIKFTVDTS+L E+
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSIL-QER 779
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
AD+D + +AQ+VCSL N+EECMACGS
Sbjct: 780 TKTADDD-DTKMAQMVCSLTNREECMACGS 808
>gi|218201671|gb|EEC84098.1| hypothetical protein OsI_30411 [Oryza sativa Indica Group]
Length = 814
Score = 1400 bits (3624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 657/814 (80%), Positives = 749/814 (92%), Gaps = 4/814 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS+EHCDPVLVAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT +HPDYA LA R+AVSNLHK TK SFSETIKDMY ++N+RSG A LVA DV
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYGHFNERSGLNAPLVAHDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+IMKNA+ LD IIYDRDFD+DYFGFKTLERSYLLK+ +VVERPQHMLMRVSVGIHK
Sbjct: 121 YEVIMKNASRLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA+KTYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIYDTLK+CA+
Sbjct: 181 DDIESAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S+HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFYALWVPDLFM+RV+++ +WSLFCP++A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQNNQEWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EG+AK ++ A+ LWF+IL +QIETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DCWGDEFEKLYTKYEREGKAKKIVPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP ETAVCNLASIALPR+VREKGVP++S+ SKLVGS DSKNR F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPIESHPSKLVGSSDSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVT +T NLNKIID+N+YP+ET +RSN+RHRPIGIG+QGLADTFILLG+PF+S
Sbjct: 481 DFDKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNKDIFETIY+H+LKASAELA K+GPYETY GSP+SKGILQ DMWN+ PSDRW+W
Sbjct: 541 PEAQQLNKDIFETIYFHSLKASAELAGKEGPYETYEGSPVSKGILQPDMWNVVPSDRWNW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SLR ISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 PSLRSTISKVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+G+W+ ALK KII+E+GSV K++EIP++LKAIYKTVWEIKQKTLVDMA DRGCY
Sbjct: 661 LHDLTEMGVWTPALKNKIIFEDGSVQKMTEIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL--NN 778
IDQSQSLN+HMEQP+ GKLTSLHF+AWSKG+KTGMYYLRTRAAADAIKFTVDT++L N
Sbjct: 721 IDQSQSLNVHMEQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTALLKANG 780
Query: 779 EKANRA--DNDVEANLAQVVCSLKNQEECMACGS 810
E +A + DVEA +AQ+VCSL N+EEC+ACGS
Sbjct: 781 ENGTKAAEEEDVEAKMAQMVCSLNNREECLACGS 814
>gi|115466654|ref|NP_001056926.1| Os06g0168600 [Oryza sativa Japonica Group]
gi|55296056|dbj|BAD67618.1| putative ribonucleotide reductase [Oryza sativa Japonica Group]
gi|55296229|dbj|BAD67970.1| putative ribonucleotide reductase [Oryza sativa Japonica Group]
gi|113594966|dbj|BAF18840.1| Os06g0168600 [Oryza sativa Japonica Group]
gi|222635036|gb|EEE65168.1| hypothetical protein OsJ_20270 [Oryza sativa Japonica Group]
Length = 814
Score = 1399 bits (3622), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 657/814 (80%), Positives = 748/814 (91%), Gaps = 4/814 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS+EHCDPVLVAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT +HPDYA LA R+AVSNLHK TK SFSETIKDMY ++N+RSG A LVA DV
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYGHFNERSGLNAPLVAHDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+IMKNA+ LD IIYDRDFD+DYFGFKTLERSYLLK+ +VVERPQHMLMRVSVGIHK
Sbjct: 121 YEVIMKNASRLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA+KTYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIYDTLK+CA+
Sbjct: 181 DDIESAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S+HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFYALWVPDLFM+RV+++ +WSLFCP++A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQNNQEWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EG+AK ++ A+ LWF+IL +QIETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DCWGDEFEKLYTKYEREGKAKKIVPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP ETAVCNLASIALPR+VREKGVP++S+ SKLVGS DSKNR F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPIESHPSKLVGSSDSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVT +T NLNKIID+N+YP+ET +RSN+RHRPIGIG+QGLADTFILLG+PF+S
Sbjct: 481 DFDKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNKDIFETIY+H+LKASAELA K+GPYETY GSP+SKGILQ DMWN+ PSDRW+W
Sbjct: 541 PEAQQLNKDIFETIYFHSLKASAELAGKEGPYETYEGSPVSKGILQPDMWNVVPSDRWNW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SLR ISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 PSLRSTISKVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+G+W+ ALK KIIYE+GSV K++ IP++LKAIYKTVWEIKQKTLVDMA DRGCY
Sbjct: 661 LHDLTEMGVWTPALKNKIIYEDGSVQKMTVIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL--NN 778
IDQSQSLN+HMEQP+ GKLTSLHF+AWSKG+KTGMYYLRTRAAADAIKFTVDT++L N
Sbjct: 721 IDQSQSLNVHMEQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTALLKANG 780
Query: 779 EKANRA--DNDVEANLAQVVCSLKNQEECMACGS 810
E +A + DVEA +AQ+VCSL N+EEC+ACGS
Sbjct: 781 ENGTKAAEEEDVEAKMAQMVCSLNNREECLACGS 814
>gi|413953007|gb|AFW85656.1| hypothetical protein ZEAMMB73_966032 [Zea mays]
Length = 815
Score = 1397 bits (3615), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 655/815 (80%), Positives = 748/815 (91%), Gaps = 5/815 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS++HCDPVLVAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT +HPDYA LA R+AVSNLHK TK SFSETIKDMY ++NKRSG A LVA+DV
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYMHFNKRSGLMAPLVAEDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKNAA LD IIYDRDFD+DYFGFKTLERSYLLK+D +VVERPQHMLMRVS+GIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKLDGKVVERPQHMLMRVSLGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +SA++TYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIESAIRTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYETLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S+HNIRA+GSYI GTNGSSNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGSSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFYALWVPDLFM+RV+++G+WSLFCP++A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEENRARDLFYALWVPDLFMQRVQNNGEWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
DSWG EF++LY +YE +G+AK V+ A+ LWF+IL +QIETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DSWGEEFDNLYKKYESQGKAKKVVPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+EF+SP ETAVCNLASIALPR+VREK VP++S+ SKLVGS DSKNR F
Sbjct: 421 GTIKSSNLCTEIIEFTSPTETAVCNLASIALPRFVREKDVPLESHPSKLVGSSDSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+LAEVT +T NLNKIID+N+YP+ET +RSN+RHRPIGIG+QGLADTFILLG+PF+S
Sbjct: 481 DFEKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNKDIFETIYYHALKASAELA K+GPYETY GSP+SKGILQ DMW++ PS+RW+W
Sbjct: 541 PEAQQLNKDIFETIYYHALKASAELAAKEGPYETYEGSPVSKGILQPDMWDVVPSNRWNW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SLRE ISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 PSLRETISKVGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+G+W+ LK +IIY++GSV KI+EIP++LKAIYKTVWEIKQKTLVDMA DRGCY
Sbjct: 661 LHDLTEMGIWTPTLKNQIIYDDGSVQKIAEIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN-- 778
IDQSQSLN+HMEQ + GKLTSLHF+AWSKG+KTGMYYLRTRAAADAIKFTVDT++L
Sbjct: 721 IDQSQSLNVHMEQANFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTLLKENG 780
Query: 779 ---EKANRADNDVEANLAQVVCSLKNQEECMACGS 810
A+ DV+A +AQ+VCSL N+EEC+ACGS
Sbjct: 781 NGVSDGKPAEEDVDAKMAQMVCSLNNREECLACGS 815
>gi|186920362|gb|ACC95434.1| ribonucleotide diphosphate reductase large subunit 1 [Oryza sativa
Japonica Group]
Length = 814
Score = 1396 bits (3613), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 656/814 (80%), Positives = 747/814 (91%), Gaps = 4/814 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS+EHCDPVLVAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT +HPDYA LA R+AVSNLHK TK SFSETIKDMY ++N+RSG A LVA DV
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYGHFNERSGLNAPLVAHDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+IMKNA+ LD IIYDRDFD+DYFGFKTLERSYLLK+ +VVERPQHMLMRVSVGIHK
Sbjct: 121 YEVIMKNASRLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA+KTYHLMSQ WFTHA+PTLFNAGT +PQLSSCFL+CMKDDSIEGIYDTLK+CA+
Sbjct: 181 DDIESAIKTYHLMSQRWFTHASPTLFNAGTTRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S+HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFYALWVPDLFM+RV+++ +WSLFCP++A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQNNQEWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EG+AK ++ A+ LWF+IL +QIETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DCWGDEFEKLYTKYEREGKAKKIVPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP ETAVCNLASIALPR+VREKGVP++S+ SKLVGS DSKNR F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPIESHPSKLVGSSDSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVT +T NLNKIID+N+YP+ET +RSN+RHRPIGIG+QGLADTFILLG+PF+S
Sbjct: 481 DFDKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNKDIFETIY+H+LKASAELA K+GPYETY GSP+SKGILQ DMWN+ PSDRW+W
Sbjct: 541 PEAQQLNKDIFETIYFHSLKASAELAGKEGPYETYEGSPVSKGILQPDMWNVVPSDRWNW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SLR ISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 PSLRSTISKVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+G+W+ ALK KIIYE+GSV K++ IP++LKAIYKTVWEIKQKTLVDMA DRGCY
Sbjct: 661 LHDLTEMGVWTPALKNKIIYEDGSVQKMTVIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL--NN 778
IDQSQSLN+HMEQP+ GKLTSLHF+AWSKG+KTGMYYLRTRAAADAIKFTVDT++L N
Sbjct: 721 IDQSQSLNVHMEQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTALLKANG 780
Query: 779 EKANRA--DNDVEANLAQVVCSLKNQEECMACGS 810
E +A + DVEA +AQ+VCSL N+EEC+ACGS
Sbjct: 781 ENGTKAAEEEDVEAKMAQMVCSLNNREECLACGS 814
>gi|242094852|ref|XP_002437916.1| hypothetical protein SORBIDRAFT_10g004780 [Sorghum bicolor]
gi|241916139|gb|EER89283.1| hypothetical protein SORBIDRAFT_10g004780 [Sorghum bicolor]
Length = 815
Score = 1395 bits (3612), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 656/816 (80%), Positives = 748/816 (91%), Gaps = 7/816 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS++HCDPVLVAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT +HPDYA LA R+AVSNLHK TK SFSETIKDMY ++N+RSG A LVA+DV
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYMHFNERSGLMAPLVAEDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKNAA LD IIYDRDFD+DYFGFKTLERSYLLK+ +VVERPQHMLMRVSVGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +SA++TYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIY+TLK+CA+
Sbjct: 181 EDIESAIRTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYETLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S+HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFYALWVPDLFM+RV+++G+WSLFCP++A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEENRARDLFYALWVPDLFMQRVQNNGEWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EF++LY +YE +G+AK V+ A+ LWF+IL +QIETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DCWGEEFDNLYKKYESQGKAKKVVPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+EF+SP ETAVCNLASIALPR+VREKGVP++S+ SKLVGS DSKNR F
Sbjct: 421 GTIKSSNLCTEIIEFTSPNETAVCNLASIALPRFVREKGVPLESHPSKLVGSSDSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+LAEVT +T NLNKIID+N+YP+ET +RSN+RHRPIGIG+QGLADTFILLG+PF+S
Sbjct: 481 DFEKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNKDIFETIYYH+LKASAELA K+GPYETY GSP+SKGILQ DMW++ PS+RW+W
Sbjct: 541 PEAQQLNKDIFETIYYHSLKASAELAAKEGPYETYEGSPVSKGILQPDMWDVVPSNRWNW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SLRE ISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 PSLRETISKVGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+G+W+ LK +IIY++GSV KI+EIP++LKAIYKTVWEIKQKTLVDMA DRGCY
Sbjct: 661 LHDLTEMGIWTPTLKNQIIYDDGSVQKIAEIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLN+HMEQ + GKLTSLHF+AWSKG+KTGMYYLRTRAAADAIKFTVDT++L E
Sbjct: 721 IDQSQSLNVHMEQANFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTLL-KEN 779
Query: 781 ANRADN------DVEANLAQVVCSLKNQEECMACGS 810
N N DVEA +AQ+VCSL N+EECMACGS
Sbjct: 780 GNVVSNGKPTEEDVEAKMAQMVCSLNNREECMACGS 815
>gi|356512785|ref|XP_003525096.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Glycine max]
gi|27261142|gb|AAN87547.1|AF118784_1 ribonucleotide reductase large subunit A [Glycine max]
Length = 809
Score = 1392 bits (3604), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 657/810 (81%), Positives = 736/810 (90%), Gaps = 1/810 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS EHCDPVLV+QKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA LA R+AVSNLHK TK SFSETIK MY ++N+RS KA L+ADDV
Sbjct: 61 AETAAAMTANHPDYASLAARIAVSNLHKNTKKSFSETIKVMYYHFNERSAMKAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEII+KNAA LD IIYDRDFD+DYFGFKTLERSYLLK+ +VVERPQHMLMRV+VGIHK
Sbjct: 121 YEIIIKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DSA++TYH+MSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIYDTLK+CA+
Sbjct: 181 DDIDSAVRTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S+HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFYALWV DLFMERV+ +G+WSLFCP++A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVSDLFMERVQSNGQWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY+QYE EG+AK V+ A+ LWFEIL SQIETGTPYMLFKD+CN+KSNQQNL
Sbjct: 361 DCWGEEFEKLYTQYEREGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP ETAVCNLASIALPRYVREKGVP++S+ SKLVGSR SKNR F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRYVREKGVPMESHPSKLVGSRGSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT I+ NLNKIIDVN+YP++T RRSN+RHRPIGIG+QGLADTFILLG+ F+S
Sbjct: 481 DFDKLGEVTAIVATNLNKIIDVNYYPVDTARRSNMRHRPIGIGVQGLADTFILLGVAFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNKDIFETIYYHALK S+ELA K+GPYETY GSP+SKGILQ DMW + PS RWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKTSSELAAKEGPYETYSGSPISKGILQPDMWGVMPSSRWDW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LREMI+K GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 DALREMIAKTGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+GLWS +K IIYE+GSV KI EIP++LK IYKTVWEIKQKTLVDMA DRGCY
Sbjct: 661 LHDLTEMGLWSPTIKNNIIYEDGSVQKIPEIPDDLKIIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+QP+ GKLTSLHFYAWSKG+KTGMYYLR+RAAADAIKFTVDTS+L +EK
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSML-HEK 779
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ D +AQ+VCSL N+EEC+ACGS
Sbjct: 780 PMAEEEDDNTKMAQMVCSLTNREECLACGS 809
>gi|15227096|ref|NP_179770.1| ribonucleoside-diphosphate reductase subunit M1 [Arabidopsis
thaliana]
gi|56749666|sp|Q9SJ20.1|RIR1_ARATH RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase R1
subunit; Short=AtRNR1
gi|4417273|gb|AAD20398.1| putative ribonucleoside-diphosphate reductase large subunit
[Arabidopsis thaliana]
gi|14334814|gb|AAK59585.1| putative ribonucleoside-diphosphate reductase large subunit
[Arabidopsis thaliana]
gi|30793895|gb|AAP40400.1| putative ribonucleoside-diphosphate reductase large subunit
[Arabidopsis thaliana]
gi|330252128|gb|AEC07222.1| ribonucleoside-diphosphate reductase subunit M1 [Arabidopsis
thaliana]
Length = 816
Score = 1391 bits (3601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 644/817 (78%), Positives = 736/817 (90%), Gaps = 8/817 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS +HCDPVLVAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSSDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA LA R+AVSNLHK TK SFSETIKDM+ + N RSG K+ L+ADDV
Sbjct: 61 AETAAAMTCNHPDYASLAARIAVSNLHKNTKKSFSETIKDMFYHVNDRSGLKSPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+EIIM+NAA LD IIYDRDF++DYFGFKTLERSYLLK+ VVERPQHMLMRV+VGIHK
Sbjct: 121 FEIIMQNAARLDSEIIYDRDFEYDYFGFKTLERSYLLKVQGTVVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DS ++TYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIY+TLK+CA+
Sbjct: 181 DDIDSVIQTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S+HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD++EFL+LRKN GKEE RARDLFYALW+PDLFMERV+++G+WSLFCP++A GLA
Sbjct: 301 LEPWHADVYEFLELRKNHGKEEHRARDLFYALWLPDLFMERVQNNGQWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EG+AK V+ A++LW+EIL SQ+ETGTPYMLFKDSCNRKSNQQNL
Sbjct: 361 DCWGAEFETLYTKYEREGKAKKVVQAQQLWYEILTSQVETGTPYMLFKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP ETAVCNLASIALPR+VREKGVP+ S+ KL GS DSKNR F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPLDSHPPKLAGSLDSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+LAEVT +T NLNKIIDVN+YP+ET + SN+RHRPIGIG+QGLAD FILLG+PF+S
Sbjct: 481 DFEKLAEVTATVTVNLNKIIDVNYYPVETAKTSNMRHRPIGIGVQGLADAFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNKDIFETIYYHALKAS ELA + GPYETY GSP+SKGILQ DMWN+ PSDRWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASTELAARLGPYETYAGSPVSKGILQPDMWNVIPSDRWDW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ LR+MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 AVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLT++GLW+ LK K+I ENGS+ ++EIP++LKAIY+TVWEIKQ+T+VDMAADRGCY
Sbjct: 661 LHDLTDMGLWTPTLKNKLINENGSIVNVAEIPDDLKAIYRTVWEIKQRTVVDMAADRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM++P+ KLTSLHFY W KG+KTGMYYLR+RAAADAIKFTVDT++L EK
Sbjct: 721 IDQSQSLNIHMDKPNFAKLTSLHFYTWKKGLKTGMYYLRSRAAADAIKFTVDTAML-KEK 779
Query: 781 ANRADNDVEA-------NLAQVVCSLKNQEECMACGS 810
+ A+ D E LAQ+VCSL N EEC+ACGS
Sbjct: 780 PSVAEGDKEVEEEDNETKLAQMVCSLTNPEECLACGS 816
>gi|3661603|gb|AAC61773.1| ribonucleoside-diphosphate reductase large subunit [Arabidopsis
thaliana]
Length = 816
Score = 1389 bits (3595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/817 (78%), Positives = 735/817 (89%), Gaps = 8/817 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS +HCDP+LVAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSSDHCDPILVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA LA R+AVSNLHK TK SFSETIKDM+ + N RSG K+ L+ADDV
Sbjct: 61 AETAAAMTCNHPDYASLAARIAVSNLHKNTKKSFSETIKDMFYHVNDRSGLKSPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+EIIM+NAA LD IIYDRDF++DYFGFKTLERSYLLK+ VVERPQHMLMRV+VGIHK
Sbjct: 121 FEIIMQNAARLDSEIIYDRDFEYDYFGFKTLERSYLLKVQGTVVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DS ++TYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIY TLK+CA+
Sbjct: 181 DDIDSVIQTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYGTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S+HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD++EFL+LRKN GKEE RARDLFYALW+PDLFMERV+++G+WSLFCP++A GLA
Sbjct: 301 LEPWHADVYEFLELRKNHGKEEHRARDLFYALWLPDLFMERVQNNGQWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EG+AK V+ A++LW+EIL SQ+ETGTPYMLFKDSCNRKSNQQNL
Sbjct: 361 DCWGAEFETLYTKYEREGKAKKVVQAQQLWYEILTSQVETGTPYMLFKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP ETAVCNLASIALPR+VREKGVP+ S+ KL GS DSKNR F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPLDSHPPKLAGSLDSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+LAEVT +T NLNKIIDVN+YP+ET + SN+RHRPIGIG+QGLAD FILLG+PF+S
Sbjct: 481 DFEKLAEVTATVTVNLNKIIDVNYYPVETAKTSNMRHRPIGIGVQGLADAFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNKDIFETIYYHALKAS ELA + GPYETY GSP+SKGILQ DMWN+ PSDRWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASTELAARLGPYETYAGSPVSKGILQPDMWNVIPSDRWDW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ LR+MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 AVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLT++GLW+ LK K+I ENGS+ ++EIP++LKAIY+TVWEIKQ+T+VDMAADRGCY
Sbjct: 661 LHDLTDMGLWTPTLKNKLINENGSIVNVAEIPDDLKAIYRTVWEIKQRTVVDMAADRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM++P+ KLTSLHFY W KG+KTGMYYLR+RAAADAIKFTVDT++L EK
Sbjct: 721 IDQSQSLNIHMDKPNFAKLTSLHFYTWKKGLKTGMYYLRSRAAADAIKFTVDTAML-KEK 779
Query: 781 ANRADNDVEA-------NLAQVVCSLKNQEECMACGS 810
+ A+ D E LAQ+VCSL N EEC+ACGS
Sbjct: 780 PSVAEGDKEVEEEDNETKLAQMVCSLTNPEECLACGS 816
>gi|4151068|emb|CAA71816.1| ribonucleotide reductase [Nicotiana tabacum]
Length = 808
Score = 1387 bits (3589), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 653/810 (80%), Positives = 738/810 (91%), Gaps = 2/810 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGR+E V FDKITARLKKLSYGLS EHCDPVLV+QKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVWKRDGRQETVHFDKITARLKKLSYGLSPEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAA+T NHPDYA LA R+AVSNLHK TK SFSET+KDMYN+ ++RSG KA L++D+V
Sbjct: 61 AETAAALTANHPDYASLAARIAVSNLHKNTKKSFSETVKDMYNHISERSGLKAPLISDEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKNAA LD IIYDRDFD+DYFGFKTLERSYLLK++ VVERPQHMLMRVSVGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKINGNVVERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA+KTYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMK+DSIEGIYDTLK+CA+
Sbjct: 181 DDIESAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S+HNIR +GSYI GTNG+SNGI+PML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSVHNIRGTGSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIFEFLD+RKN GKEE RARDLFYALWVPDLFMERV+ +G+WSLFCPS+A GLA
Sbjct: 301 LEPWHSDIFEFLDMRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPSEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG +FE LY++YE EG+AK V+ A+ LWFEIL SQIETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 DCWGEDFEKLYTKYEREGKAKKVVQAQNLWFEILKSQIETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP ETAVCNLASIALPRYVREK VP +S SKLVGSR SKNR F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRYVREKEVPDESQPSKLVGSRGSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +LAEVT ++T NLNKIIDVN+YP+ET +RSNLRHRPIG+G+QGLADTFILLG+ F+S
Sbjct: 481 DFAKLAEVTALVTTNLNKIIDVNYYPVETAKRSNLRHRPIGLGVQGLADTFILLGMSFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNKDIFETIYYHALKAS+ELA K+GPYETY GSP+SKGILQ DMW +TPSDRWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASSELAAKEGPYETYAGSPVSKGILQPDMWGVTPSDRWDW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LR MI+KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 GVLRGMIAKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+GLWS LK +IIY++GSV KI EIP++LK IYKTVWEIKQ+TLVDMA DRGCY
Sbjct: 661 LHDLTEMGLWSPTLKNRIIYDDGSVQKIPEIPQDLKVIYKTVWEIKQRTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+QP+ GKLTSLHF+AWS+G+KTGMYYLR+RAAADAIKFTVDTS+L +
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFHAWSRGLKTGMYYLRSRAAADAIKFTVDTSMLKEKP 780
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
D+D + +AQ+VCSL N++ECMACGS
Sbjct: 781 QTAVDDDTK--MAQMVCSLSNRDECMACGS 808
>gi|297821381|ref|XP_002878573.1| R1/RIBONUCLEOTIDE REDUCTASE, reductase protein R1 [Arabidopsis
lyrata subsp. lyrata]
gi|297324412|gb|EFH54832.1| R1/RIBONUCLEOTIDE REDUCTASE, reductase protein R1 [Arabidopsis
lyrata subsp. lyrata]
Length = 817
Score = 1386 bits (3588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/818 (78%), Positives = 739/818 (90%), Gaps = 9/818 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS +HCDPVLVAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSSDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA LA R+AVSNLHK TK SFSETIKDM+N+ N RSG K+ L+ADDV
Sbjct: 61 AETAAAMTCNHPDYASLAARIAVSNLHKNTKKSFSETIKDMFNHVNDRSGLKSPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++IIM+NAA LD IIYDRDF++DYFGFKTLERSYLLK+ VVERPQHMLMRV+VGIHK
Sbjct: 121 FDIIMQNAARLDSEIIYDRDFEYDYFGFKTLERSYLLKVQGTVVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DSA++TYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIY+TLK+CA+
Sbjct: 181 DDIDSAIQTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK-GAFAI 299
ISKSAGGIG+S+HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRK GAFA+
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKEGAFAV 300
Query: 300 YLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGL 359
YLEPWHAD+FEFL+LRKN GKEE RARDLFYALWVPDLFMERV+ +G+WSLFCP++A GL
Sbjct: 301 YLEPWHADVFEFLELRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPNEAPGL 360
Query: 360 ADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQN 419
AD WG EFE LY++YE EG+AK V+ A++LW+EIL SQ+ETGTPYMLFKDSCNRKSNQQN
Sbjct: 361 ADCWGAEFETLYTKYEREGKAKKVVQAQQLWYEILTSQVETGTPYMLFKDSCNRKSNQQN 420
Query: 420 LGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRL 479
LGTIKSSNLCTEI+E++SP ETAVCNLASIALPR+VREKGVP+ S+ SKL GS SKNR
Sbjct: 421 LGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPLDSHPSKLAGSLGSKNRY 480
Query: 480 FDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFE 539
FDF++LAEVT +T NLNKIIDVN+YP+ET + SN+RHRPIGIG+QGLAD FILLG+PF+
Sbjct: 481 FDFDKLAEVTATVTLNLNKIIDVNYYPVETAKTSNMRHRPIGIGVQGLADAFILLGMPFD 540
Query: 540 SPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWD 599
SPEAQQLNKDIFETIYYHALKAS+ELA + GPYETY GSP+SKGILQ DMWN+ PS+RWD
Sbjct: 541 SPEAQQLNKDIFETIYYHALKASSELAARVGPYETYSGSPVSKGILQPDMWNVIPSNRWD 600
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W+ LR+MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKH
Sbjct: 601 WAVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 660
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL DLT++GLW+ LK K+I ENGS+ ++EIP++LKAIY+TVWEIKQ+T+VDMA DRGC
Sbjct: 661 LLHDLTDMGLWTPTLKNKLINENGSIVNVAEIPDDLKAIYRTVWEIKQRTVVDMAVDRGC 720
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YIDQSQSLNIHM++P+ KLTSLHFYAW+KG+KTGMYYLR+RAAADAIKFTVDT++L E
Sbjct: 721 YIDQSQSLNIHMDKPNFAKLTSLHFYAWTKGLKTGMYYLRSRAAADAIKFTVDTAML-KE 779
Query: 780 KANRADNDVEA-------NLAQVVCSLKNQEECMACGS 810
K + A+ D E LAQ+VCSL N ++C+ACGS
Sbjct: 780 KPSVAEGDKEVEEEDNETKLAQMVCSLTNPDDCLACGS 817
>gi|47497381|dbj|BAD19419.1| putative ribonucleotide reductase [Oryza sativa Japonica Group]
gi|125584063|gb|EAZ24994.1| hypothetical protein OsJ_08774 [Oryza sativa Japonica Group]
gi|186920366|gb|ACC95436.1| ribonucleotide diphosphate reductase large subunit 2 [Oryza sativa
Japonica Group]
Length = 810
Score = 1386 bits (3587), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/810 (79%), Positives = 739/810 (91%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLK+LSYGLS+EHCDPVLVAQKVCAGVYKGVTT+QL ELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKRLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLGELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT +HPDYA LA R+A+SNLHK T SFSETIK MY +Y++RSG A L+ADDV
Sbjct: 61 AETAAAMTASHPDYASLAARIAISNLHKTTMKSFSETIKVMYMHYDERSGLLAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKN LD IIYDRDFD+DYFGFKTLERSYLLK+ +VVERPQHMLMRVS+GIHK
Sbjct: 121 YEIIMKNTTRLDSEIIYDRDFDYDYFGFKTLERSYLLKVVGKVVERPQHMLMRVSIGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA+KTYH+MSQ WFTHA+PTLFNAGTP+PQLSSCFL+CM DDSIEGIYDTL +CA
Sbjct: 181 DDIESAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMNDDSIEGIYDTLSECAT 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSIHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISKCAGGIGLSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFYALW+PDLFMERV+++ WSLFCP++A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEENRARDLFYALWIPDLFMERVQNNENWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EF++LY +YE EG+AK V+SA+ LWF+IL +QIETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 DCWGDEFQNLYKKYEREGKAKKVVSAQALWFDILKAQIETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+EF+SP ETAVCNLASI LPR+VREKGVP++S+ +KLVGS SKNR F
Sbjct: 421 GTIKSSNLCTEIIEFTSPTETAVCNLASIGLPRFVREKGVPMESHPAKLVGSNGSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAE+T I+T NLNKIID N+YP+ET +RSN+RHRPIGIG+QGLADTFILLG+PF+S
Sbjct: 481 DFDKLAEITSIVTRNLNKIIDTNYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQQLNKDIFETIYYHALKASAE+A K+GPYETY GSP+SKGILQ DMWN+ PSDRW+W
Sbjct: 541 TEAQQLNKDIFETIYYHALKASAEIAAKEGPYETYSGSPVSKGILQPDMWNVVPSDRWNW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S LREMISK GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 SDLREMISKVGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+G+WS LK KI+YE+GSV KISEIP++LKAIY+TVWEIKQKT+VDMA DRGCY
Sbjct: 661 LHDLTEMGIWSPVLKNKIVYEDGSVQKISEIPDDLKAIYRTVWEIKQKTIVDMAIDRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+QP+ GKLTSLHF+AWSKG+KTGMYYLRTRAAADAIKFTVDT++L +++
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTLLKDKQ 780
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
N + DV++ +A+VVCSL N++EC+ACGS
Sbjct: 781 HNAEEEDVQSKMAEVVCSLNNRDECLACGS 810
>gi|357125146|ref|XP_003564256.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Brachypodium distachyon]
Length = 814
Score = 1384 bits (3583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/814 (79%), Positives = 744/814 (91%), Gaps = 4/814 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS++HCDPVLVAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAA+T +HPDYA LA R+AVSNLHK TK SFSETIKDMY +YN+RSG A L+ADD+
Sbjct: 61 AETAAALTASHPDYASLAARIAVSNLHKSTKKSFSETIKDMYLHYNERSGLMAPLIADDI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+IMKNAA LD IIYDRDFD+DYFGFKTLERSYLLK+ VVERPQHMLMRVSVGIHK
Sbjct: 121 YEVIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGIVVERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DSA++TYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIYDTLK+CA+
Sbjct: 181 DDIDSAIRTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S+HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLF+ALWVPDLFM+RV+++ +WSLFCP++A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPDLFMQRVQNNEEWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG +FE+LY +YE EG+AK VI A+ LWF+IL +QIETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DCWGEKFENLYKKYEREGKAKKVIPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SPEETAVCNLASIALPR+VR+KGVP++S+ SKLVGS S+NR F
Sbjct: 421 GTIKSSNLCTEIIEYTSPEETAVCNLASIALPRFVRDKGVPIESHPSKLVGSNGSQNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT +T NLNKIID+N+YP+ET +RSN+RHRPIGIG+QGLADTF+LLG+PF+S
Sbjct: 481 DFDKLGEVTSTVTYNLNKIIDMNYYPVETAKRSNMRHRPIGIGVQGLADTFMLLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLN+DIFETIYYHALKASAELA K+GPYETY GSP+SKG++Q DMWN+TPS RW+W
Sbjct: 541 PEAQQLNRDIFETIYYHALKASAELAAKEGPYETYEGSPVSKGVIQPDMWNVTPSSRWNW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LRE ISK GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 PTLRETISKVGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+G+W+ ALK KIIYE+GSV K++EIP++LKAIYKTVWEIKQKTLVDMA DRGCY
Sbjct: 661 LHDLTEMGIWTPALKNKIIYEDGSVQKMAEIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL---- 776
IDQSQSLN+HMEQP+ KLTSLHF+AWSKG+KTGMYYLRTRAAADAIKFTVDT L
Sbjct: 721 IDQSQSLNVHMEQPNFAKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTGFLKVNG 780
Query: 777 NNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ + ++DVEA +AQV CSL N+EEC+ACGS
Sbjct: 781 DTDTKPAEEDDVEAKMAQVACSLNNREECLACGS 814
>gi|4151066|emb|CAA71815.1| ribonucleotide reductase [Nicotiana tabacum]
Length = 808
Score = 1384 bits (3582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/810 (80%), Positives = 738/810 (91%), Gaps = 2/810 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS +HCDPVLVAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSPDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA LA R+AVSNLHK K SFSETIKDMY + ++RSG KA LV+D+V
Sbjct: 61 AETAAAMTANHPDYACLAARIAVSNLHKTPKKSFSETIKDMYYHVSERSGLKAPLVSDEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKNAA LD IIYDRDFD+DYFGFKTLERSYLLK+ +VVERPQHMLMRVSVGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKIQGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +S +KTYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMK+DSIEGIYDTLK+CA+
Sbjct: 181 DDIESVIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S+HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
L+PWHADIFEFLDLRKN GKEE RARDLFYALWVPDLFM+RV+ +G+WSLFCP++A GLA
Sbjct: 301 LDPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQSNGQWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG +FE LY YE+EG+AK V+ A+ LWFEIL SQIETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DCWGEDFEKLYINYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP ETAVCNLASIALPRYVREKGVP +S SKLVGSR SKNR F
Sbjct: 421 GTIKSSNLCTEIIEYTSPAETAVCNLASIALPRYVREKGVPSESQPSKLVGSRGSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVT ++T NLNKIIDVN+YP+ET +RSNLRHRPIGIG+QGLADTF+LLG+ F+S
Sbjct: 481 DFDKLAEVTALVTTNLNKIIDVNYYPVETAKRSNLRHRPIGIGVQGLADTFMLLGMAFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQQLNKDIFETIYYHALKAS+ELA K+GPYETY GSP+SKGI+Q DMW +TPSD+WDW
Sbjct: 541 REAQQLNKDIFETIYYHALKASSELAAKEGPYETYAGSPVSKGIIQPDMWGVTPSDKWDW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LREMI+KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 VALREMITKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+GLWS ALK +IIYE+GSV KI EIP+ELK IYK VWEIKQ+TLVDMA DRGCY
Sbjct: 661 LYDLTEMGLWSPALKNRIIYEDGSVQKIPEIPDELKEIYKNVWEIKQRTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+QP+ GKLTSLHF+ WS+G+KTGMYYLR+RAAADAIKFTVDT++L +
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFHTWSRGLKTGMYYLRSRAAADAIKFTVDTAMLKEKP 780
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
D+D + +AQ+VCSL N+E+C++CGS
Sbjct: 781 KTAVDDDTK--MAQMVCSLTNREDCLSCGS 808
>gi|356509012|ref|XP_003523246.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Glycine max]
Length = 808
Score = 1383 bits (3580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 655/810 (80%), Positives = 736/810 (90%), Gaps = 2/810 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS +HCD VLV+QKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSADHCDAVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA LA R+AVSNLHK TK SFSETIK MY ++++RSG KA L+ADDV
Sbjct: 61 AETAAAMTTNHPDYACLAARIAVSNLHKNTKKSFSETIKIMYYHFSERSGLKAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKNAA LD IIYDRDFD+DYFGFKTLERSYLLK+ +VVERPQHMLMRV+VGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DSA+KTYH+MSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIY+TLK+CAI
Sbjct: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAI 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+SIH+IRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSIHDIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLFYALWVPDLFMERV+ +G+WSLFCPS+A GLA
Sbjct: 301 LEPWHADMFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPSEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG +FE LY +YE EG+AK V+ A+ LWFEIL SQIETGTPYMLFKD+CNRKSNQQNL
Sbjct: 361 DCWGEKFEELYHRYEREGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+SSP ETAVCNLASIALPRYVREKGVP++S+ SKLVGS S NR F
Sbjct: 421 GTIKSSNLCTEIIEYSSPTETAVCNLASIALPRYVREKGVPMESHPSKLVGSTGSGNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAE+T ++T NLNK+IDVN+YP+E +RSNLRHRPIGIG+QGLADTFILLG+ F+S
Sbjct: 481 DFDKLAEITALVTTNLNKVIDVNYYPVENAKRSNLRHRPIGIGVQGLADTFILLGMAFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLN++IFETIYYHALK S +LA K+GPYETY GSP+SKGILQ DMW +TPS+RWDW
Sbjct: 541 PEAQQLNQEIFETIYYHALKTSCDLAAKEGPYETYSGSPLSKGILQPDMWGVTPSNRWDW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LREMIS NG RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 DALREMISSNGARNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+GLWS LK KIIYE+GSV KI E+P LK+IYKTVWEIKQ+TLVDMAADRGCY
Sbjct: 661 LHDLTEMGLWSPTLKNKIIYEDGSVQKIPEMPAVLKSIYKTVWEIKQRTLVDMAADRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+QP+ GKLTSLHFYAWSKG+KTGMYYLR+RAAADAIKFTVDTS L EK
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSAL-KEK 779
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+N + D +AQ+VCSL N+EEC+ACGS
Sbjct: 780 SN-VEYDDNTKMAQMVCSLTNREECLACGS 808
>gi|224096482|ref|XP_002310626.1| predicted protein [Populus trichocarpa]
gi|222853529|gb|EEE91076.1| predicted protein [Populus trichocarpa]
Length = 812
Score = 1383 bits (3579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/812 (80%), Positives = 734/812 (90%), Gaps = 2/812 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDG++E V FDKITARLKKLSYGLS +HCDPVLV+QKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSTDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA LA R+ VSNLHK T SFSETIK MYN++N++SG KA L+ADDV
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTHKSFSETIKIMYNHFNEKSGLKAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKNAA LD IIYDRDFD+DYFGFKTLERSYLLK+ +VVERPQHMLMRV+VGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DSALKTYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIYDTLK+CA+
Sbjct: 181 DDIDSALKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S+HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLFYALWVPDLFMERV+ +G+WSLFCPS+A GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPSEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE +G+AK V+ A+ LWFEIL SQIETGTPYMLFKD+CNRKSNQQNL
Sbjct: 361 DCWGKEFEELYTRYERDGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP ETAVCNLASIALPR+VRE GVP++S+ SK+VGSR S R F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREMGVPIESHPSKVVGSRGSNRRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+LAEVT ++T NLNKIIDVN+YP+ET RRSN RHRPIGIG+QGLAD F+LLG+ F+S
Sbjct: 481 DFEKLAEVTGVVTVNLNKIIDVNYYPVETARRSNFRHRPIGIGVQGLADAFMLLGMAFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ+LNKDIFETIYYHALKAS+E+A ++GPYETY GSP+SKGILQ DMW +TPS W+W
Sbjct: 541 PEAQKLNKDIFETIYYHALKASSEIAAREGPYETYVGSPVSKGILQPDMWGVTPSSLWNW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LREMISKNGVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 DALREMISKNGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+GLWS ALK KIIYE+GSV KI EI ++LK IYKTVWEIKQKTLVDMA DRGC+
Sbjct: 661 LHDLTEMGLWSPALKNKIIYEDGSVQKIPEISDDLKCIYKTVWEIKQKTLVDMAVDRGCF 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+QP+ GKLTSLHFYAWSKG+KTGMYYLR++AAADAIKFTVDTSV +K
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSQAAADAIKFTVDTSVFKEKK 780
Query: 781 AN--RADNDVEANLAQVVCSLKNQEECMACGS 810
+ +AQ+VCSL N+EECMACGS
Sbjct: 781 PELDDDAAADDTKIAQMVCSLTNREECMACGS 812
>gi|326502586|dbj|BAJ95356.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 812
Score = 1381 bits (3574), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 648/812 (79%), Positives = 741/812 (91%), Gaps = 2/812 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKL+YGLS++HCDPVLVAQKVCAGVY+GVTT+QLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLAYGLSQDHCDPVLVAQKVCAGVYRGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT +HPDYA LA R+AVSNLHK T SFSET+K MY ++N+RSG A L+ADDV
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTMKSFSETVKVMYTHFNERSGLMAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKNA LD IIYDRDFD+D+FGFKTLERSYLLK+ +VVERPQHMLMRVSVGIHK
Sbjct: 121 YEIIMKNATRLDSEIIYDRDFDYDFFGFKTLERSYLLKVGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA+KTYH+MSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIYDTL +CA
Sbjct: 181 DDIESAVKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLSECAS 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+SIHN+RA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISKSAGGIGVSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI+EFLDLRKN GKEE RARDLFYALW+PDLFMERV+ + +WSLFCPS+A GLA
Sbjct: 301 LEPWHADIYEFLDLRKNHGKEENRARDLFYALWIPDLFMERVQKNEQWSLFCPSEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EF++LY++YE EG+AK ++SA+ LWFEIL +QIETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 DCWGDEFQNLYNKYEREGKAKKIVSAQSLWFEILKAQIETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIVEF+SP ETAVCNLASIALPR+VREKGVP++S+ +KLVGS SKNR F
Sbjct: 421 GTIKSSNLCTEIVEFTSPTETAVCNLASIALPRFVREKGVPIESHPAKLVGSIGSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAE+T ++T NLNKIID+N+YPIET RRSN+RHRPIGIG+QGLADTFILLG+PF+S
Sbjct: 481 DFDKLAEITSVVTWNLNKIIDINYYPIETARRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNKDIFETIYYHALKASAE+A K+GPYETY G P+SKGILQ DMWN+ PSDRWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASAEIAAKEGPYETYDGCPVSKGILQPDMWNVVPSDRWDW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++R MISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 PAIRGMISKVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+G+WS LK IIY++GSV KI+EIP++LKAIYKTVWEIKQKT+VDMA DRGCY
Sbjct: 661 LHDLTEMGIWSPVLKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+Q + GKLTSLHF+ WSKG+KTGMYYLRTRAAADAIKFTVDTS+L ++K
Sbjct: 721 IDQSQSLNIHMDQANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDKK 780
Query: 781 ANRA--DNDVEANLAQVVCSLKNQEECMACGS 810
A + D+EA +AQV CSL N+E+C+ACGS
Sbjct: 781 PANAEEEEDLEAKMAQVTCSLNNREDCLACGS 812
>gi|351722146|ref|NP_001236466.1| ribonucleotide reductase large subunit B [Glycine max]
gi|27261144|gb|AAN87548.1|AF118785_1 ribonucleotide reductase large subunit B [Glycine max]
Length = 808
Score = 1380 bits (3572), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 656/810 (80%), Positives = 734/810 (90%), Gaps = 2/810 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KR+GR+E V FDKITARLKKLSYGLS +HCD VLVAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRNGRQETVHFDKITARLKKLSYGLSSDHCDAVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA LA R+AVSNLHK TK SFSETIK MY ++N+RSG KA L+ADDV
Sbjct: 61 AETAAAMTANHPDYACLAARIAVSNLHKNTKKSFSETIKIMYYHFNERSGLKAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKNAA LD IIYDRDFD+DYFGFKTLERSYLLK+ +V+ERPQHMLMRV+VGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGQVLERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DSA+KTYH+MSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIY+TLK+CAI
Sbjct: 181 DDIDSAVKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAI 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+SIH+IRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSIHDIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLFYALWVPDLFMERV+ +G+WSLFCPS+A GL
Sbjct: 301 LEPWHADMFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPSEAPGLT 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG +FE LY QYE EG+A V+ A+ LWFEIL SQIETGTPYMLFKD+CNRKSNQQNL
Sbjct: 361 DCWGEKFEELYLQYEREGKAMKVVQAQSLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+SSP ETAVCNLASIALPRYVREKGVP++S+ SKLVGS S NR F
Sbjct: 421 GTIKSSNLCTEIIEYSSPTETAVCNLASIALPRYVREKGVPMESHPSKLVGSTCSGNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAE+T ++T NLNK+IDVN+YP+E +RSNLRHRPIGIG+QGLADTFILLG+ F+S
Sbjct: 481 DFDKLAEITALVTTNLNKVIDVNYYPVENAKRSNLRHRPIGIGVQGLADTFILLGMAFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNK+IFETIYYHALK S LA K+GPYETY GSP+SKGILQ DMW + PS+RWDW
Sbjct: 541 PEAQQLNKEIFETIYYHALKTSCGLAAKEGPYETYSGSPISKGILQPDMWGVAPSNRWDW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 DALREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+GLWS LK KIIYE+GSV KI EIP +LK IYKTVWEIKQ+TLVDMAADRGCY
Sbjct: 661 LHDLTEMGLWSPTLKNKIIYEDGSVQKIPEIPADLKNIYKTVWEIKQRTLVDMAADRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+QP+ GKLTSL FYAWSKG+KTGMYYLR+RAAADAIKFTVDTS L EK
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLQFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSAL-REK 779
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+N D+D +AQ+VCSL N++EC+ACGS
Sbjct: 780 SNVEDDD-NTKMAQMVCSLTNRDECLACGS 808
>gi|224083844|ref|XP_002307143.1| predicted protein [Populus trichocarpa]
gi|222856592|gb|EEE94139.1| predicted protein [Populus trichocarpa]
Length = 817
Score = 1380 bits (3572), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 656/817 (80%), Positives = 741/817 (90%), Gaps = 7/817 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS +HCDPVLV+QKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSIDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA LA R+ VSNLHK T+ SFSETIK MYN++N +SG KA+L+ADD+
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTQKSFSETIKIMYNHFNDKSGLKAALIADDI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKN+A LD IIYDRDFD+DYFGFKTLERSYLLK+ +VVERPQHMLMRV+VGIHK
Sbjct: 121 YEIIMKNSARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DSA+KTYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIYDTLK+CA+
Sbjct: 181 DDIDSAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSAHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLFYALWVPDLFMERV+ +G+WSLFCP++A GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEENRARDLFYALWVPDLFMERVQSNGQWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE G+AK V+ A+ LWFEIL SQIETGTPYMLFKD+CNRKSNQQNL
Sbjct: 361 DCWGKEFEELYTRYERNGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP ETAVCNLASIALPR+VRE GVPV+S+ SKLVGSR K+R F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREMGVPVESHPSKLVGSRGFKSRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+LAEVT ++T NLNKIIDVN+YP+ET RRSN RHRPIGIG+QGLADTFILLG+ F+S
Sbjct: 481 DFEKLAEVTGVVTSNLNKIIDVNYYPVETARRSNFRHRPIGIGVQGLADTFILLGMSFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD-RWD 599
PEAQ+LNKDIFETIYYHALKAS+E+A ++GPYETY GSP+SKGILQ DMW +TPS+ WD
Sbjct: 541 PEAQKLNKDIFETIYYHALKASSEIAAREGPYETYEGSPVSKGILQPDMWGVTPSNLLWD 600
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W +LREMISKNGVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKH
Sbjct: 601 WDALREMISKNGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 660
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL DLTE+GLWS ALK KIIYE+GSV I EIP +LK IYKTVWEIKQKTLVDMA DRGC
Sbjct: 661 LLHDLTEMGLWSPALKNKIIYEDGSVQNIPEIPNDLKFIYKTVWEIKQKTLVDMAVDRGC 720
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YIDQSQSLNIHM+QP+ GKLTSLHFYAWSKG+KTGMYYLR+RAAADAIKFTVDTSVL ++
Sbjct: 721 YIDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSVLQDK 780
Query: 780 K------ANRADNDVEANLAQVVCSLKNQEECMACGS 810
K A A +D + +AQ+VCSL N+++C+ACGS
Sbjct: 781 KLKSDGAAAAAADDDDTKMAQMVCSLANRDDCLACGS 817
>gi|449448442|ref|XP_004141975.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Cucumis sativus]
gi|449497699|ref|XP_004160484.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Cucumis sativus]
Length = 807
Score = 1380 bits (3572), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/810 (80%), Positives = 739/810 (91%), Gaps = 3/810 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS +HCDPVLV+QKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSIDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA LA R+AVSNLHK TK SFS+TI+DMY + ++RSG+KA+L+ADDV
Sbjct: 61 AETAAAMTANHPDYASLAARIAVSNLHKNTKKSFSDTIRDMYYHVSERSGQKAALIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+IMKNAA LD IIYDRDFD+D+FGFKTLERSYLLK+ +VVERPQHMLMRV+VGIHK
Sbjct: 121 YEVIMKNAARLDSEIIYDRDFDYDFFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DSA+KTYH MSQ WFTHA+PTLFN+GTP+PQLSSCFL+CMK+DSIEGIYDTLK+CA+
Sbjct: 181 DDIDSAIKTYHTMSQRWFTHASPTLFNSGTPRPQLSSCFLICMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+SIHNIRA GSYI GTNG+SNGI+PML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSIHNIRAMGSYIRGTNGTSNGILPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFYALWVPDLFM+RV+ +G+WSLFCP++A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQSNGEWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY YE++G+AK V+ A+ LWFEIL SQIETGTPYMLFKD+CNRKSNQQNL
Sbjct: 361 DCWGEEFEKLYIGYEQQGKAKKVVKAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+SSP ETAVCNL+SIALPR+VREKGV ++S+ SKLVGSRDSKNR F
Sbjct: 421 GTIKSSNLCTEIIEYSSPTETAVCNLSSIALPRFVREKGVSIESHPSKLVGSRDSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAE+T ++T NLNKIIDVN+YP+ET +RSNLRHRPIGIG+QGLADTFILLG+ F+S
Sbjct: 481 DFDKLAEITALVTTNLNKIIDVNYYPVETAKRSNLRHRPIGIGVQGLADTFILLGMSFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNKDIFE IYYHALKAS ELA +GPYETY GSP+SKGILQ DMW +TPS RWDW
Sbjct: 541 PEAQQLNKDIFEAIYYHALKASCELAAVEGPYETYAGSPVSKGILQFDMWGVTPSKRWDW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LR I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 EGLRAQIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLT++GLW ALK KIIY NGSV I+EIP++L+AIYKTVWEIKQKTLVDMAADRGCY
Sbjct: 661 LHDLTDMGLWCPALKNKIIYANGSVQNIAEIPDDLRAIYKTVWEIKQKTLVDMAADRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+QP+ GKLTSLHFYAWSKG+KTGMYYLR++AAADAIKFTVD S+L EK
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSQAAADAIKFTVDPSLL-KEK 779
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+N D+ + +AQ+VCSL N+E+CMACGS
Sbjct: 780 SNSEDDSTK--MAQMVCSLTNREDCMACGS 807
>gi|357137493|ref|XP_003570335.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Brachypodium distachyon]
Length = 810
Score = 1379 bits (3570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/810 (79%), Positives = 736/810 (90%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSY LS++HCDPVLVAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLSYSLSQDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT +HPDYA LA R+AVSNLHK T SFS+T+K MY ++N+RSG A L+ADDV
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTMKSFSDTVKVMYTHFNERSGLMAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKNA LD IIYDRDFD+DYFGFKTLERSYLLK+ +VVERPQHMLMRVSVGIHK
Sbjct: 121 YEIIMKNATRLDSEIIYDRDFDYDYFGFKTLERSYLLKVGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA+KTYH+MSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIYDTL +CA
Sbjct: 181 DDIESAVKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLSECAS 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+SIHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISKSAGGIGVSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FLDLRKN GKEE RARDLFYALW+PDLFMERV+ + +WSLFCPS+A GL+
Sbjct: 301 LEPWHADIFDFLDLRKNHGKEENRARDLFYALWIPDLFMERVQRNEQWSLFCPSEAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EF++LY +YE EG+AK V+SA+ LWF IL +QIETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DCWGDEFQNLYKKYEREGKAKKVVSAQSLWFGILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+EF+SP ETAVCNLASIALPR+VREK VP++S+ +KLVGS SKNR F
Sbjct: 421 GTIKSSNLCTEIIEFTSPTETAVCNLASIALPRFVREKDVPIESHPAKLVGSNGSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAE+T +T NLNKIID+N+YPIET RRSN+RHRPIGIG+QGLADTFILLG+PF+S
Sbjct: 481 DFDKLAEITSTVTCNLNKIIDINYYPIETARRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNKDIFETIYYHALKASA LA K+GPYETY GSP+SKGILQ DMWN+ PSDRW+W
Sbjct: 541 PEAQQLNKDIFETIYYHALKASAGLAAKEGPYETYDGSPVSKGILQPDMWNVVPSDRWNW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++REMIS G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 PAIREMISNVGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+G+WS ALK IIYE+GSV KISEIP++LKAIYKTVWEIKQKT+VDMA DRGCY
Sbjct: 661 LHDLTEMGIWSPALKNNIIYEDGSVQKISEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+Q + GKLTSLHF+AWSKG+KTGMYYLRTRAAADAIKFTVDT L +++
Sbjct: 721 IDQSQSLNIHMDQANSGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTGFLKDKQ 780
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+R D++A +AQV CSL N+E+C+ACGS
Sbjct: 781 QSREAEDLQAKMAQVACSLNNREDCLACGS 810
>gi|357519755|ref|XP_003630166.1| Ribonucleoside-diphosphate reductase [Medicago truncatula]
gi|355524188|gb|AET04642.1| Ribonucleoside-diphosphate reductase [Medicago truncatula]
Length = 819
Score = 1379 bits (3568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/819 (79%), Positives = 730/819 (89%), Gaps = 9/819 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS EHCDPVLVAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT NHPDYA LA R+AVSNLHK T SFSET+K MYN++N RSGKKA L+ADDV
Sbjct: 61 AETAAGMTANHPDYASLAARIAVSNLHKNTLKSFSETVKVMYNHFNHRSGKKAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEII+KNAA LD IIYDRDFD+DYFGFKTLERSYLLK+ VVERPQHM+MRVSVGIHK
Sbjct: 121 YEIIIKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGVVVERPQHMIMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA+KTYH MSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMK+DSIEGIYDTLK+CA+
Sbjct: 181 DDVESAVKTYHFMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S+HNIRA GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSVHNIRAHGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFL+L+ N GKEE RARDLFYALWVPDLFMERV+ +G+WSLFCP++A GLA
Sbjct: 301 LEPWHADIFEFLELKINHGKEEQRARDLFYALWVPDLFMERVQSNGEWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG E++ LY+QYE+ G+AK ++ A+ LWF IL SQIETG PYMLFKD+CNRKSNQQNL
Sbjct: 361 DCWGEEYDKLYTQYEKAGKAKKIVQAQSLWFAILKSQIETGNPYMLFKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP ETAVCNLASIALPRYVR+KG+PV+S+ SKLVGSR S +R F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRYVRDKGLPVESHQSKLVGSRGSSSRYF 480
Query: 481 DFERLAEV-------TKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFIL 533
DFE+L EV T ++T NLNKIIDVN+YP+ET RSNLRHRPIGIG+QGLADTFIL
Sbjct: 481 DFEKLGEVHLLLTTVTAVVTTNLNKIIDVNYYPVETAERSNLRHRPIGIGVQGLADTFIL 540
Query: 534 LGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNIT 593
LG+ F+SPEAQQLNKDIFETIYYHALK S ELA K+GPYETY GSP+SKGILQ DMW +T
Sbjct: 541 LGMAFDSPEAQQLNKDIFETIYYHALKTSCELAAKEGPYETYSGSPVSKGILQPDMWGVT 600
Query: 594 PSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEF 653
PS+ WDW +LREMISK GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF
Sbjct: 601 PSNLWDWGALREMISKTGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEF 660
Query: 654 IVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDM 713
+VVNKHLL DLTE+GLW+ ALK KIIY+NGSV +SEIP ELK IYKTVWEIKQK LVDM
Sbjct: 661 VVVNKHLLHDLTEMGLWNPALKNKIIYDNGSVQNLSEIPAELKVIYKTVWEIKQKILVDM 720
Query: 714 AADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDT 773
A DRGCYIDQSQSLNIHM++P+ GKLTSLHFYAWSKG+KTGMYYLRTRAA+DAIKFTVDT
Sbjct: 721 AVDRGCYIDQSQSLNIHMDKPNFGKLTSLHFYAWSKGLKTGMYYLRTRAASDAIKFTVDT 780
Query: 774 SVLNNE-KANRADN-DVEANLAQVVCSLKNQEECMACGS 810
S + ++ K AD+ D + +AQ+VCSL N++EC ACGS
Sbjct: 781 SAIKDQPKVKEADDEDDDTKMAQMVCSLTNRDECEACGS 819
>gi|413943018|gb|AFW75667.1| hypothetical protein ZEAMMB73_410950 [Zea mays]
Length = 835
Score = 1371 bits (3548), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/835 (77%), Positives = 741/835 (88%), Gaps = 25/835 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS++HCDPVLVAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSET--------------------IKD 100
AETAAAMT +HPDYA LA R+AVSNLHK TK SFSET IKD
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETVKAGLVGLGCELECGRCGCRIKD 120
Query: 101 MYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMD 160
MY ++N+RSG A LVA+DVYEIIM NAA LD IIYDRDFD+DYFGFKTLERSYLLK+
Sbjct: 121 MYRHFNERSGLMAPLVAEDVYEIIMNNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKLG 180
Query: 161 SRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFL 220
+VVERPQHMLMRVSVGIHK+D +SA++TYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL
Sbjct: 181 GKVVERPQHMLMRVSVGIHKEDIESAIRTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFL 240
Query: 221 LCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFN 280
+CMKDDSIEGIY+TLK+CA+ISKSAGGIG+S+HNIRA+GSYI GTNG+SNGIVPML+VFN
Sbjct: 241 ICMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFN 300
Query: 281 DTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFME 340
DTARYVDQGGGKRKGAFA+YLEPWHADIFEFLDLRKN GKEE RARDLFYALWVPDLFM+
Sbjct: 301 DTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFYALWVPDLFMQ 360
Query: 341 RVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIET 400
RV+ +G+WSLFCP++A GLAD WG EF++LY +YE +G+AK V+ A+ LWF+IL +QIET
Sbjct: 361 RVQSNGEWSLFCPNEAPGLADCWGEEFDNLYKKYESQGKAKKVVPAQTLWFDILKAQIET 420
Query: 401 GTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGV 460
GTPYML+KD+CNRKSNQQNLGTIKSSNLCTEI+EF+SP ETAVCNLASIALPR+VREKGV
Sbjct: 421 GTPYMLYKDTCNRKSNQQNLGTIKSSNLCTEIIEFTSPTETAVCNLASIALPRFVREKGV 480
Query: 461 PVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPI 520
P++S+ SKLVGS DSKNR FDFE+LAEVT +T NLNKIID+N+YP+ET +RSN+RHRPI
Sbjct: 481 PLESHPSKLVGSSDSKNRYFDFEKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPI 540
Query: 521 GIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPM 580
GIG+QGLADTFILLG+PF+S EA QLNKDIFETIYYHALK+SAELAVK+GPYETY GSP+
Sbjct: 541 GIGVQGLADTFILLGMPFDSLEAHQLNKDIFETIYYHALKSSAELAVKEGPYETYEGSPV 600
Query: 581 SKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
SKGILQ DMWN+ PS RW+W SLRE ISK G+RNSLLVAPMPTASTSQILGNNECFEPYT
Sbjct: 601 SKGILQPDMWNVVPSTRWNWPSLRETISKAGIRNSLLVAPMPTASTSQILGNNECFEPYT 660
Query: 641 SNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYK 700
SNIY+RRVLSGEF+VVNKHLL DLTE+G+W+ LK +IIY++GSV KI+EIP++LKAIYK
Sbjct: 661 SNIYSRRVLSGEFVVVNKHLLHDLTEMGIWTPTLKNQIIYDDGSVQKIAEIPDDLKAIYK 720
Query: 701 TVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRT 760
TVWEIKQKTLVDMA DRGCYIDQSQSLN+HMEQ + GKLTSLHF+AWSKG+KTGMYYLRT
Sbjct: 721 TVWEIKQKTLVDMAVDRGCYIDQSQSLNVHMEQANFGKLTSLHFHAWSKGLKTGMYYLRT 780
Query: 761 RAAADAIKFTVDTSVLNNEKANRADN-----DVEANLAQVVCSLKNQEECMACGS 810
RAAADAIKFTVDT++L D DVEA +AQ+VCS N+EEC+ACGS
Sbjct: 781 RAAADAIKFTVDTTLLKENGNGMNDGKPTEEDVEAKMAQMVCSFNNREECLACGS 835
>gi|147775539|emb|CAN71697.1| hypothetical protein VITISV_003192 [Vitis vinifera]
Length = 791
Score = 1365 bits (3533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/810 (80%), Positives = 726/810 (89%), Gaps = 19/810 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS +HCDPVLV+QKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQESVHFDKITARLKKLSYGLSIDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA LA R+ VSNLHK TK SFSETIK+MYN++N+RSG KA L+A DV
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTKKSFSETIKEMYNHFNERSGLKAPLIAADV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKNAA LD IIYDRDFD+DYFGFKTLERSYLLK+ +VVERPQHMLMRVSVGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKIQGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DSA+KTYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIYDTLK+CA+
Sbjct: 181 DDIDSAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+S+HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFYALWVPDLFMERV+ +G WSLFCP +A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGHWSLFCPXEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EF LY+QYE EG+AK V+ A+ LWFE+L SQIETGTPYMLFKDSCN+KSNQQNL
Sbjct: 361 DCWGQEFVDLYTQYEREGKAKKVVQAQNLWFEVLKSQIETGTPYMLFKDSCNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++S +ETAVCNLASIALPRYVREKGVP++SN SKLVGSR SKNR F
Sbjct: 421 GTIKSSNLCTEIIEYTSADETAVCNLASIALPRYVREKGVPMESNPSKLVGSRGSKNRFF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVT I+T NLNKIIDVN+YP QGLADTFILLG+ F+S
Sbjct: 481 DFDKLAEVTAIVTSNLNKIIDVNYYP-----------------FQGLADTFILLGMAFDS 523
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNKDIFETIYYHALKAS ELA+++GPYETY G P+SKGILQ DMW +TPS RWDW
Sbjct: 524 PEAQQLNKDIFETIYYHALKASCELAMREGPYETYDGCPVSKGILQPDMWGVTPSSRWDW 583
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+MIS+NG+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 584 DALRKMISENGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 643
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+GLWS LK +IIYENGSV K+SEIPE+LK IY+TVWEIKQKTLVDMA DRGCY
Sbjct: 644 LHDLTEMGLWSPTLKNQIIYENGSVLKMSEIPEDLKVIYRTVWEIKQKTLVDMAVDRGCY 703
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+QP+ GKLTSLHFYAWSKG+KTGMYYLR+RAAADAIKFTVDTS+L E+
Sbjct: 704 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSIL-QER 762
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
AD+D + +AQ+VCSL N+EECMACGS
Sbjct: 763 TKTADDD-DTKMAQMVCSLTNREECMACGS 791
>gi|242063422|ref|XP_002453000.1| hypothetical protein SORBIDRAFT_04g036410 [Sorghum bicolor]
gi|241932831|gb|EES05976.1| hypothetical protein SORBIDRAFT_04g036410 [Sorghum bicolor]
Length = 810
Score = 1360 bits (3520), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/810 (77%), Positives = 731/810 (90%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARL +LSYGLS EHCDPVLVAQKVCAGVYKG+TT ++ ELA
Sbjct: 1 MYVVKRDGRQESVHFDKITARLTRLSYGLSAEHCDPVLVAQKVCAGVYKGITTGEIGELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT +HPDYA LA R+AVSNLHK T SFS T+K +Y +Y++RSG A L+ADDV
Sbjct: 61 AETAAAMTTSHPDYASLAARIAVSNLHKNTMTSFSATVKALYTHYDERSGLMAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ IIMKN A L+ I YDRDFD+DYFGFKTL+RSYLLK+ +V ERPQHMLMRVSVGIHK
Sbjct: 121 FTIIMKNTARLECEINYDRDFDYDYFGFKTLQRSYLLKIGGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA+KTYH+MSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIYDTL +CA
Sbjct: 181 DDIESAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLSECAA 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+SIHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLFYALWVPDLFMERV+ + +WSLFCPS+A GLA
Sbjct: 301 LEPWHPDIFEFLDLKKNHGKEENRARDLFYALWVPDLFMERVQHNEQWSLFCPSEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EF++LY +YE EG+AK V++A+ LWF+IL +QIETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DCWGDEFQNLYQKYEREGKAKKVVAAQALWFDILKAQIETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP ETAVCNLASIALPR+VREKGVP++S+ +KLVGS SKNR F
Sbjct: 421 GTIKSSNLCTEIIEYTSPSETAVCNLASIALPRFVREKGVPIESHPAKLVGSSGSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAE+T I+T NLNKIID+++YPIE RRSN+RHRPIGIG+QGLADTFILLG+PF+S
Sbjct: 481 DFDKLAEITSIVTCNLNKIIDISYYPIENARRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNKDIFETIYYH+LKASAELA K+GPYETY GSP+SKGILQ DMWN+ PS RW+W
Sbjct: 541 PEAQQLNKDIFETIYYHSLKASAELAAKEGPYETYAGSPVSKGILQPDMWNVVPSSRWNW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S++REMIS+ G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 SAIREMISQVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DL+E+G+WS LK KIIYE+GSV KI+E+P++LKAIYKTVWEIKQKT+VDMA DRGCY
Sbjct: 661 LHDLSEMGVWSPVLKNKIIYEDGSVQKITEVPDDLKAIYKTVWEIKQKTIVDMAIDRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHMEQP+ GKLTSLHF+ WSKG+KTGMYYLRTRAAADAIKFTVDT++L +++
Sbjct: 721 IDQSQSLNIHMEQPNSGKLTSLHFHGWSKGLKTGMYYLRTRAAADAIKFTVDTTLLKDKQ 780
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ D + +AQV CSL N+EEC+ACGS
Sbjct: 781 PTSEEEDAQVKMAQVACSLNNREECLACGS 810
>gi|297797920|ref|XP_002866844.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312680|gb|EFH43103.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 807
Score = 1334 bits (3453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/782 (79%), Positives = 715/782 (91%), Gaps = 1/782 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDG++E V FDKITARLKKLSYGLS +HCDPVLVAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGKQETVHFDKITARLKKLSYGLSIDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA LA R+AVSNLHK TK SFSET++DMY++ N+RSG + L+A DV
Sbjct: 61 AETAAAMTANHPDYASLAARIAVSNLHKNTKKSFSETVRDMYSHVNERSGLASPLIAADV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMK+A LD IIYDRDF++DYFGFKTLERSYLLK+ +VVERPQHMLMRVSVGIHK
Sbjct: 121 YEIIMKHATRLDSEIIYDRDFEYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D DSA+KTYHLMSQ WFTHA+PTLFN+GTP+ QLSSCFL+CMKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDSAIKTYHLMSQRWFTHASPTLFNSGTPRAQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+SIHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSIHNIRATGSYIRGTNGASNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FL+LRKN GKEE RARDLFY LW+PDLFMERV+ DG+WSLFCP++A GLA
Sbjct: 301 LEPWHADIFDFLELRKNHGKEEHRARDLFYGLWIPDLFMERVQTDGQWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY+QYE +G+AK V+ A++LW+EIL SQ+ETGTPYMLFKDSCN KSNQQNL
Sbjct: 361 DCWGAEFERLYTQYENQGKAKKVVQAQQLWYEILTSQVETGTPYMLFKDSCNSKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP ETAVCNLASIALPR+VRE +P+ S+ SK+VGS DSKNR F
Sbjct: 421 GTIKSSNLCTEILEYTSPTETAVCNLASIALPRFVRENDIPLDSHPSKIVGSLDSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVT +T NLNKIIDVNHYP+ET + SN+RHRPIGIG+QGLAD FILLG+PF+S
Sbjct: 481 DFDKLAEVTATVTVNLNKIIDVNHYPVETAKTSNMRHRPIGIGVQGLADAFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PE+QQLNKDIFETIYYHALK+S+E+A K+G YETY GSP+SKGILQ DMWN+ PSDRWDW
Sbjct: 541 PESQQLNKDIFETIYYHALKSSSEIATKEGTYETYQGSPVSKGILQPDMWNVIPSDRWDW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++LR+MISKNG+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 AALRDMISKNGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLT++GLWS LK KII+ENGS+ + EIP++LKAIY+TVWEIKQ+T+VDMAADRGC+
Sbjct: 661 LHDLTDMGLWSPTLKNKIIHENGSIVNVKEIPDDLKAIYRTVWEIKQRTVVDMAADRGCF 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHME+P+ KLTSLHFYAW KG+KTGMYYLR+R+AADAIKFTVDT++L EK
Sbjct: 721 IDQSQSLNIHMEKPNFAKLTSLHFYAWKKGLKTGMYYLRSRSAADAIKFTVDTAML-KEK 779
Query: 781 AN 782
N
Sbjct: 780 PN 781
>gi|168022742|ref|XP_001763898.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684903|gb|EDQ71302.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 811
Score = 1334 bits (3452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/811 (75%), Positives = 725/811 (89%), Gaps = 1/811 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGR+E V FDKITARLKKLSYGL+ EHC+PVLVAQKVC GVYKGVTT+QLDELA
Sbjct: 1 MYVIKRDGRQEAVHFDKITARLKKLSYGLNPEHCEPVLVAQKVCMGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA+LA R+AVSNLHK TK SFSET+KDMY + N+RSG K+ L+ADDV
Sbjct: 61 AETAAAMTANHPDYAILAARIAVSNLHKNTKKSFSETVKDMYYHVNERSGLKSPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II+KNA LD IIYDRDFD+DYFGFKTLERSYLLK++ +VVERPQHMLMRVSVGIHK
Sbjct: 121 YDIIIKNAPRLDSEIIYDRDFDYDYFGFKTLERSYLLKVNGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
++ ++ LKTYH+MSQ WFTHA+PTLFNAGTP+PQLSSCFLLCMK+DSIEGIYDTLK+CA+
Sbjct: 181 ENIEAVLKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLLCMKNDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLS+HNIR +GSYI GTNG+SNGI+PML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISKSAGGIGLSVHNIRTTGSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFE+LDLRKN GKEE RARDLFY LW+PDLFM+RV+++G WSLFCP++A GLA
Sbjct: 301 LEPWHADIFEWLDLRKNHGKEESRARDLFYGLWIPDLFMQRVQNNGTWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG +FE LY++YE EGRAK V+ A+KLWF +L +QIETG PY+LFKD+CNRKSNQQNL
Sbjct: 361 DCWGEQFETLYARYELEGRAKKVVQAQKLWFAVLEAQIETGNPYILFKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIVEF+SP+ETAVCNLAS+ALPR+VREKGV ++S+ +K++GS +NR F
Sbjct: 421 GTIKSSNLCTEIVEFTSPDETAVCNLASLALPRFVREKGVSLESHPTKIIGSNGHENRFF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L E+T ++T NLN+IIDVN+YP+ET RRSN+RHRPIG+G+QGLAD FILLG+PF+S
Sbjct: 481 DFNKLGEITSLVTRNLNRIIDVNYYPVETARRSNMRHRPIGLGVQGLADAFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQQLN+DIFETIYYHALK S ELA ++G YETY GSP+SKG LQ DMWN+ PS RWDW
Sbjct: 541 EEAQQLNRDIFETIYYHALKTSCELAAEEGVYETYAGSPISKGALQPDMWNVKPSTRWDW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SLR+MI NGVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 DSLRQMILNNGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLT +GLW+H LK ++IY NGS+ +I IP++LK IY+TVWEIKQ+++VDMAA RG +
Sbjct: 661 LNDLTNMGLWTHDLKNQVIYHNGSIQQIDVIPDDLKKIYRTVWEIKQRSIVDMAAARGAF 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+QP+ GKLTSLHFY W+KG+KTGMYYLR+RAAADAIKFTVD S + E
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYTWTKGLKTGMYYLRSRAAADAIKFTVDQSSIKQET 780
Query: 781 -ANRADNDVEANLAQVVCSLKNQEECMACGS 810
A N++E ++Q+VCSL+N++ECM+CGS
Sbjct: 781 PAAVVSNNLEEKMSQMVCSLENKDECMSCGS 811
>gi|168046427|ref|XP_001775675.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672948|gb|EDQ59478.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 813
Score = 1321 bits (3419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/813 (75%), Positives = 721/813 (88%), Gaps = 3/813 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGR+E V FDKITARLKKLSYGL+ EHC+PVLVAQKVC GVYKGVTT+QLDELA
Sbjct: 1 MYVIKRDGRQESVHFDKITARLKKLSYGLNPEHCEPVLVAQKVCMGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA+LA R+AVSNLHK TK SFSET+KDMY + N RSG K+ L+ DDV
Sbjct: 61 AETAAAMTANHPDYAILAARIAVSNLHKNTKKSFSETVKDMYRHVNARSGLKSPLIDDDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I+KNAA LD IIYDRDFD+DYFGFKTLERSYLL+++ +VVERPQHMLMRVSVGIHK
Sbjct: 121 YDLIIKNAALLDSEIIYDRDFDYDYFGFKTLERSYLLRVNGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ D+ LKTYH MSQ WFTHA+PTLFNAGTP+PQLSSCFL+C K DSIEGIYDTLK+CA+
Sbjct: 181 DNIDAVLKTYHTMSQRWFTHASPTLFNAGTPRPQLSSCFLVCTKGDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLS+HNIRA+GSYI GTNG+SNGI+PML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISKSAGGIGLSVHNIRATGSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF++LDLRKN GKEE RARDLFY LW+PDLFM RV+++G WSLFCP++A GLA
Sbjct: 301 LEPWHADIFDWLDLRKNHGKEENRARDLFYGLWIPDLFMRRVQENGVWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EG+AK V+ A+KLWF +L +QIETG PY+LFKD+CNRKSNQQNL
Sbjct: 361 DCWGEEFEKLYTRYEVEGKAKKVVQAQKLWFAVLEAQIETGNPYILFKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIVEF+SP+ETAVCNLASIALPR+VRE+GVP+ S+ +K++GS ++R F
Sbjct: 421 GTIKSSNLCTEIVEFTSPDETAVCNLASIALPRFVRERGVPMDSHPTKVIGSNGYESRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L E+T ++T NLN+IIDVN+YP+E RRSN+RHRPIG+G+QGLAD FILLG+PF+S
Sbjct: 481 DFEKLGEITSLVTRNLNRIIDVNYYPVEAARRSNMRHRPIGLGVQGLADAFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ+LN+DIFETIYYHAL+ S ELA ++G YETY G P+SKG+LQ DMW++ PS RWDW
Sbjct: 541 EEAQKLNRDIFETIYYHALRTSCELAAEEGVYETYDGCPISKGLLQPDMWDVKPSSRWDW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR MI+KNGVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 DALRRMIAKNGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLT+LGLW+ LK +IIY NGS+ +I IP LK IY+TVWEIKQ+ +VDMAA RG +
Sbjct: 661 LNDLTDLGLWTQDLKNQIIYHNGSIQQIDAIPAGLKKIYRTVWEIKQRAIVDMAAARGAF 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+QP+ GKLTSLHFY+W+KG+KTGMYYLR+RAAADAIKFTVD S + ++
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYSWTKGLKTGMYYLRSRAAADAIKFTVDQSSIKTKQ 780
Query: 781 ANRA---DNDVEANLAQVVCSLKNQEECMACGS 810
A A D+E L+Q+VCSL+N+EECM+CGS
Sbjct: 781 ATPAAAIAEDLEVKLSQMVCSLENKEECMSCGS 813
>gi|302805775|ref|XP_002984638.1| hypothetical protein SELMODRAFT_156827 [Selaginella moellendorffii]
gi|300147620|gb|EFJ14283.1| hypothetical protein SELMODRAFT_156827 [Selaginella moellendorffii]
Length = 803
Score = 1317 bits (3409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/810 (75%), Positives = 719/810 (88%), Gaps = 7/810 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDG++E V FDKITARLKKLSY L+ ++CDPV+VAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVIKRDGKQEAVHFDKITARLKKLSYSLNPDYCDPVIVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT +HPDYA+LA R+ VSNLHK TK SFSET+K+MY++ ++RSG KA L+A+DV
Sbjct: 61 AETAASMTTSHPDYAILAARIVVSNLHKKTKKSFSETVKEMYSHVDERSGLKAPLIANDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+IIMKNAA LD IIYDRDFD+DYFGFKTLERSYLLK++ RVVERPQHMLMRVSVGIHK
Sbjct: 121 YDIIMKNAAKLDSEIIYDRDFDYDYFGFKTLERSYLLKVNGRVVERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A+KTYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFLLCMK+DSIEGIYDTLK+CA+
Sbjct: 181 EDIEAAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLLCMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLS+HNIRA+ SYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISKSAGGIGLSVHNIRATNSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F++LDL+KN GKEE RARDLFY LW+PDLFMERVR + WSLFCP++A GLA
Sbjct: 301 LEPWHADVFDWLDLKKNHGKEENRARDLFYGLWIPDLFMERVRSNSDWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EGRAK +SA+KLWF IL SQ+ETG PYM+FKD+CNRKSNQQNL
Sbjct: 361 DCWGEEFESLYTRYEREGRAKRSLSAQKLWFAILESQMETGNPYMVFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++SP ETAVCNLASIALPR+VRE+G+ ++ +KLVGS+ KNR+F
Sbjct: 421 GTIKCSNLCTEIVEYTSPSETAVCNLASIALPRFVREQGI---NSETKLVGSKGCKNRVF 477
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +LAEVT ++TENLNKIID+N+YP++T +RSNLRHRPIGIG+QGLAD FILLGLPF+S
Sbjct: 478 DFHKLAEVTTVVTENLNKIIDINYYPVDTAKRSNLRHRPIGIGVQGLADAFILLGLPFDS 537
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LNKDIFETIYYHA+K S+ LA G YETY GSP+SKG+ Q DMWN+ PS RWDW
Sbjct: 538 EEARDLNKDIFETIYYHAMKTSSILAELYGVYETYPGSPVSKGVFQPDMWNVIPSGRWDW 597
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+EM++++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEF+VVNKHL
Sbjct: 598 AALKEMVARHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKHL 657
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLT+LG+W+ LK K++ NGS+ I IP++LK IY+TVWEIKQ+T+VDMA +RG Y
Sbjct: 658 LNDLTDLGIWTPDLKNKVMAYNGSIQSIEGIPDDLKQIYRTVWEIKQRTIVDMAVERGAY 717
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHMEQP KLTSLHF+AWS G+KTGMYYLR++AAADAIKFTVDT+ L K
Sbjct: 718 IDQSQSLNIHMEQPTTTKLTSLHFHAWSGGLKTGMYYLRSQAAADAIKFTVDTASL---K 774
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ D E LAQ+VCSL+N+E C+ACGS
Sbjct: 775 SPTKTTDEEL-LAQMVCSLENRENCLACGS 803
>gi|255587584|ref|XP_002534320.1| ribonucleoside-diphosphate reductase large chain, putative [Ricinus
communis]
gi|223525502|gb|EEF28063.1| ribonucleoside-diphosphate reductase large chain, putative [Ricinus
communis]
Length = 776
Score = 1306 bits (3381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/749 (82%), Positives = 688/749 (91%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLKKLSYGLS +HCDPVLV+QKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSMDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT NHPDYA LA R+ VSNLHK TK SFSETIK MYN++N+RSG KA L+ADDV
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTKKSFSETIKVMYNHFNERSGLKAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y IIMKNAA LD IIYDRDFD+DYFGFKTLERSYLLK+ +VVERPQHMLMRV+VGIHK
Sbjct: 121 YNIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DS +KTYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIYDTLK+CA+
Sbjct: 181 DDIDSVIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+SIHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFYALWVPDLFMERV+ +G+WS+FCP++A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSVFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY+QYE EG+AK V+ A+ LWFEIL SQIETGTPYM+FKD+ NRKSNQQNL
Sbjct: 361 DCWGEEFERLYTQYEREGKAKKVVQAQNLWFEILKSQIETGTPYMVFKDTSNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP ETAVCNLASIALPR+VREKGVP++S+ SK+VGSR SKNR F
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPMESHPSKVVGSRGSKNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVT+++T NLNKIIDVN+YP+E +RSN RHRPIGIG+QGLAD FILLG+ F+S
Sbjct: 481 DFDKLAEVTEVVTCNLNKIIDVNYYPVENAKRSNFRHRPIGIGVQGLADAFILLGMAFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQQLNK+IFETIYYHALKAS+E+A +DGPYETY GSP+SKGILQ DMW +TPS RW W
Sbjct: 541 PEAQQLNKEIFETIYYHALKASSEIAGRDGPYETYDGSPVSKGILQPDMWGVTPSSRWSW 600
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++LREMI KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHL
Sbjct: 601 NALREMIFKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLTE+GLWS LK KIIYE+GSV KI EIP++LK IYKTVWEIKQKTLVDMA DRGCY
Sbjct: 661 LHDLTEMGLWSPTLKNKIIYEDGSVQKIPEIPDDLKLIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSK 749
IDQSQSLNIHM+QP+ GKLTSLHFYAWSK
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSK 749
>gi|307103606|gb|EFN51865.1| hypothetical protein CHLNCDRAFT_32953 [Chlorella variabilis]
Length = 810
Score = 1260 bits (3260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/810 (71%), Positives = 693/810 (85%), Gaps = 4/810 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KR G PV FDKITAR+ KLSYGL+ + CDPVLVAQKV GVYKGVTT++LDELA
Sbjct: 1 MYVVKRSGVLAPVSFDKITARISKLSYGLNPDFCDPVLVAQKVTTGVYKGVTTSELDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++T HPDYALLA R+AVSNLHK T SFSET+K M+++ N ++G+KA L+ + V
Sbjct: 61 AETAASLTATHPDYALLAARIAVSNLHKNTLKSFSETVKLMFSHVNPKNGEKAPLIDEKV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIM++A LD I+YDRDFD+DYFGFKTLERSY+L+++ RVVERPQHMLMRV+VGIH
Sbjct: 121 YEIIMEHAERLDSEIVYDRDFDYDYFGFKTLERSYMLRVNGRVVERPQHMLMRVAVGIHL 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TYHL+SQ WFTHA+PTLFNAGTP+PQLSSCFL+CMK+DSIEGIYDTLK+CA
Sbjct: 181 EDVDAAVETYHLLSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKNDSIEGIYDTLKECAS 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLS+HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGLSMHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
EPWHADIF++LDLRKN GKEE RARDLFYALW+PDLFM RV +G+WSLFCP+++ GLA
Sbjct: 301 CEPWHADIFDWLDLRKNHGKEEARARDLFYALWIPDLFMHRVEANGEWSLFCPNESPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LYS+YE EGRA+ VI A++LWF IL +Q+ETG P+ML+KDS NRKSNQQNL
Sbjct: 361 DCWGEEFEALYSRYEREGRARKVIKAQQLWFAILEAQVETGNPFMLYKDSANRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+SSPEETAVCNLAS+ALPR+VREK P KLVGS D++ R F
Sbjct: 421 GTIKSSNLCTEIIEYSSPEETAVCNLASVALPRFVREKE-PSGREGKKLVGSLDAEGRYF 479
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVT + T NLNKIIDVN+YP+ET RRSN+RHRPIG+G+QGLADTF+LLGLPF+S
Sbjct: 480 DFDKLAEVTAVATRNLNKIIDVNYYPVETARRSNMRHRPIGLGVQGLADTFLLLGLPFDS 539
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA +LN+ IFETIY+ AL+ S +L+ +GPY TY GSP+SKGILQ DMW + PSDRWDW
Sbjct: 540 PEAAELNRQIFETIYFAALRTSMQLSKAEGPYSTYEGSPVSKGILQPDMWGVKPSDRWDW 599
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LR I++NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF+VVN+HL
Sbjct: 600 DGLRRDIAQNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFVVVNQHL 659
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLT LGLW +K +I+ +GSV+ + +IP LK +YKTVWEIKQ+ LVDMAADRG +
Sbjct: 660 LHDLTRLGLWDTDVKNEIVAASGSVADL-DIPNNLKELYKTVWEIKQRVLVDMAADRGAF 718
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQS N+HM P+ GKLTSLHFYAW KG+KTGMYYLR+RAAADAIKFTVD L K
Sbjct: 719 IDQSQSFNVHMSDPNFGKLTSLHFYAWKKGLKTGMYYLRSRAAADAIKFTVDQQALQRRK 778
Query: 781 ANR--ADNDVEANLAQVVCSLKNQEECMAC 808
+ R +N +++A +VCSL+N++ C+ C
Sbjct: 779 SERLAKENKATSDMAAMVCSLENKDACVMC 808
>gi|302844064|ref|XP_002953573.1| hypothetical protein VOLCADRAFT_82353 [Volvox carteri f.
nagariensis]
gi|300261332|gb|EFJ45546.1| hypothetical protein VOLCADRAFT_82353 [Volvox carteri f.
nagariensis]
Length = 824
Score = 1232 bits (3188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/822 (71%), Positives = 695/822 (84%), Gaps = 13/822 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGR+EPV FDKITAR+ KL+YGL+ + CD VLVAQKV GVYKGVTT++LDELA
Sbjct: 4 MYVIKRDGRQEPVMFDKITARIVKLAYGLNPDFCDAVLVAQKVAGGVYKGVTTSELDELA 63
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAA+T HPDYA+LA R+AVSNLHK TK SFSET++ +YNY N R+G++ASL+ +V
Sbjct: 64 AETAAALTSTHPDYAILAARIAVSNLHKKTKKSFSETMEALYNYKNPRTGQEASLIDKEV 123
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++II++NAA L+ I YDRDFDFDYFGFKTLERSYLL+M+ VVERPQ MLMRV+VGIHK
Sbjct: 124 FQIIIQNAARLNSEIRYDRDFDFDYFGFKTLERSYLLRMNGEVVERPQQMLMRVAVGIHK 183
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA++TYH MS+ WFTHA+PTLFN+GTP+PQLSSCFLLCM+DDSI+GIYDTLK+CA+
Sbjct: 184 DDIESAIQTYHAMSERWFTHASPTLFNSGTPRPQLSSCFLLCMRDDSIDGIYDTLKECAV 243
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLSIH IRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 244 ISKSAGGIGLSIHCIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 303
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHAD+FEFLDLRKN GKEE RARDLFY LW+PDLFMERV D +WSLFCP++A LA
Sbjct: 304 IEPWHADVFEFLDLRKNHGKEEARARDLFYGLWIPDLFMERVEADKEWSLFCPNEAQDLA 363
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG +FE LY+QYE EGRA+ V+ A++LWF IL +Q+ETG PYML+KDSCN+KSNQQNL
Sbjct: 364 ECWGADFERLYTQYEREGRARKVVRAQQLWFAILEAQVETGNPYMLYKDSCNKKSNQQNL 423
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI+E++SP+E AVCNLASIALPR+VRE+G KLVGS D+ NR F
Sbjct: 424 GTIKCSNLCTEIIEYTSPDEIAVCNLASIALPRFVRERGSQPGWESKKLVGSLDAPNRFF 483
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+LAE+T++ T NLNKIIDVN+YP ++SN+RHRPIG+G+QGLADTFI+LG+PF+S
Sbjct: 484 DFEKLAEMTQMATRNLNKIIDVNYYPHPKAQKSNMRHRPIGLGVQGLADTFIILGMPFDS 543
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS---DR 597
PEA +LN+ IFE IYY AL AS ELA +DG YETY GSP+S+GILQ DMW + P+ R
Sbjct: 544 PEAAELNRQIFEVIYYAALSASCELAERDGTYETYEGSPVSQGILQPDMWGVKPTGVGSR 603
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
DW +LR+ I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF VVN
Sbjct: 604 CDWPALRDRIARHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFTVVN 663
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
+HLL DL +GLWS LK +++ NGSV+ + +IP ELKA+YKTVWEIKQ+TLVDMAADR
Sbjct: 664 QHLLHDLNRMGLWSPELKNELVAANGSVADL-DIPVELKALYKTVWEIKQRTLVDMAADR 722
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G YIDQSQS N+ M P+ GKLTSLHFYAW KG+KTGMYYLRT+AAADAIKFTVD L+
Sbjct: 723 GAYIDQSQSFNVFMPDPNFGKLTSLHFYAWRKGLKTGMYYLRTKAAADAIKFTVDQQALS 782
Query: 778 NEKANR---------ADNDVEANLAQVVCSLKNQEECMACGS 810
+KA+ V A LA +VCSL+N+E C+ CGS
Sbjct: 783 RKKASNPPPTLSLPTGKFSVGAQLAAMVCSLENKEACLMCGS 824
>gi|384246529|gb|EIE20019.1| NSG5 protein [Coccomyxa subellipsoidea C-169]
Length = 847
Score = 1230 bits (3183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/848 (69%), Positives = 684/848 (80%), Gaps = 39/848 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V FDKITAR+ KLSYGL+ + CDPVLVAQKV GVYKGVTT++LD+LA
Sbjct: 1 MFVQKRDGRREAVSFDKITARVTKLSYGLNTDFCDPVLVAQKVTTGVYKGVTTSELDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT HPDYA LA R+A+SNLHK T SFSET+K MY++ N ++G+ + L+A DV
Sbjct: 61 AETAASMTATHPDYATLAARIAISNLHKNTLKSFSETMKLMYSHVNPKNGEASPLIARDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+EI++++A LD IIY+RDFD+DYFGFKTLERSYLL+++ VVERPQHMLMRV+VGIHK
Sbjct: 121 FEIVLQHAERLDSEIIYNRDFDYDYFGFKTLERSYLLRINGAVVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A++TYH +S+ WFTHA+PTLFNAGTP+PQLSSCFL+ MK+DSIEGIYDTLK+CA
Sbjct: 181 EDIEAAIRTYHYLSERWFTHASPTLFNAGTPRPQLSSCFLIAMKNDSIEGIYDTLKECAA 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLSIHNIRA GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISKSAGGIGLSIHNIRAVGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF++LDLRKN GKEE RARDLFY LW DLFMERV + WSLFCP++A GLA
Sbjct: 301 LEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTTDLFMERVESNADWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG E LY++YE EGRAK VI A++LWF IL +Q+ETG PYMLFKDSCNRKSNQQNL
Sbjct: 361 DCWGDEHAALYTRYEREGRAKRVIKAQQLWFAILEAQVETGNPYMLFKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVEF+SPEETAVCNLASIALPRYVRE+ S KL GS ++ NR F
Sbjct: 421 GTIKCSNLCTEIVEFTSPEETAVCNLASIALPRYVREREGTPSSGRPKLAGSLNAPNRYF 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L EVT IITENLNKIID+N YP ET RRSN+RHRPIGIG+QGLADTFILLG+PF+S
Sbjct: 481 DFEKLQEVTHIITENLNKIIDINFYPAETARRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNIT-PSDRWD 599
EA+QLNK+IFETIY+ AL+ S LA DGPYETY GSP+SKG+LQ DMW + PS RWD
Sbjct: 541 AEAKQLNKEIFETIYFAALEKSCSLAKTDGPYETYAGSPVSKGVLQHDMWEVQPPSQRWD 600
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W +LR I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF VVN+H
Sbjct: 601 WDTLRASIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFTVVNQH 660
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL DL GLWS K +++ NGSV + +IP++LKA+YKTVWE+KQ+TLVDMAADRG
Sbjct: 661 LLSDLVASGLWSADTKNELVAANGSVQGL-DIPDDLKALYKTVWELKQRTLVDMAADRGA 719
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL--- 776
+IDQSQS N+HM P+ GKLTSLHFYAW G+KTGMYYLRTRAAADAIKFTVD L
Sbjct: 720 FIDQSQSFNVHMSDPNFGKLTSLHFYAWKAGLKTGMYYLRTRAAADAIKFTVDQQALTKK 779
Query: 777 -----------------------NNEKANRADNDV-----------EANLAQVVCSLKNQ 802
N +R V E LA +VCSL+N+
Sbjct: 780 KAARAAKSAADLAASSVTVALKERNGSPSRQFASVKVAALDEEMQKERELAAMVCSLENK 839
Query: 803 EECMACGS 810
+ C+ CGS
Sbjct: 840 DACLMCGS 847
>gi|145340510|ref|XP_001415366.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575589|gb|ABO93658.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 817
Score = 1227 bits (3175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/817 (70%), Positives = 684/817 (83%), Gaps = 10/817 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV+KRDGR+EPV FDKITAR+KKL+YGLS+E CDPV+VAQKVC GV+ GVTT +LDELA
Sbjct: 4 LYVVKRDGREEPVAFDKITARIKKLAYGLSQEFCDPVIVAQKVCMGVFAGVTTKELDELA 63
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT HPDYA LA R+AVSNLHK TK SFSET+ MY + N+R+GK + L+ADDV
Sbjct: 64 AETAASMTSKHPDYAQLAARIAVSNLHKTTKKSFSETMTQMYEHVNERNGKWSPLLADDV 123
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEII NA LD I+YDRDF++DYFG+KTLERSYLL++D +VVERPQH+LMRVS+GIHK
Sbjct: 124 YEIIKANAERLDAEIVYDRDFEYDYFGYKTLERSYLLRIDGKVVERPQHLLMRVSIGIHK 183
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + A+ TYH++S+ W THA+PTLFNAGTP+PQLSSCFL+ MK+DSIEGIYDTLK+CA
Sbjct: 184 EDIEKAVDTYHMLSERWMTHASPTLFNAGTPRPQLSSCFLIAMKEDSIEGIYDTLKECAC 243
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLSIH+IRA+ SYI GTNG+SNGI+PML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 244 ISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 303
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF++LDLRKN GKEE RARDLFY LW DLFM+RV +G W+L CP++ GLA
Sbjct: 304 IEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMKRVEANGDWTLMCPNECPGLA 363
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY +YE EG+ K I A++LWF IL SQ+ETG PYMLFKD+CNRKSNQQNL
Sbjct: 364 DCWGEEFETLYQKYEAEGKGKKTIKAQQLWFAILESQVETGNPYMLFKDACNRKSNQQNL 423
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREK--GVPV-QSNVSKLVGSRDSKN 477
GTIKSSNLCTEIVEF+SPEETAVCNLASIALPR+V E P ++ V KLVGS +K
Sbjct: 424 GTIKSSNLCTEIVEFTSPEETAVCNLASIALPRFVIENNPSSPTGRTEVKKLVGSLKAKE 483
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
R FD ++L E+T+ +T NLN+IIDVN+YP+ET +RSN+RHRPIG+G+QGLAD FILLGL
Sbjct: 484 RYFDHDKLFEITRKVTRNLNRIIDVNYYPVETAKRSNMRHRPIGLGVQGLADVFILLGLA 543
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP--- 594
F+SPEAQ+LN +IFETIY+ AL S LAV +GPY TY GSP+SKGILQ DMW +T
Sbjct: 544 FDSPEAQKLNAEIFETIYFAALTESNALAVVEGPYTTYEGSPVSKGILQPDMWGLTQMPG 603
Query: 595 SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFI 654
DR DW+ LR I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF
Sbjct: 604 GDRHDWAGLRAAIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYARRVLSGEFT 663
Query: 655 VVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMA 714
VVN+HLL DLTELGLW LK +I NGSV+ + EIPE LKAIYKTVWEIKQ+ LVDMA
Sbjct: 664 VVNQHLLSDLTELGLWDPELKNSLIANNGSVADL-EIPENLKAIYKTVWEIKQRILVDMA 722
Query: 715 ADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
ADRG +IDQSQS N+HM P+ GKLTSLHFYAW KG+KTGMYYLR+RAAADAIKFTVD
Sbjct: 723 ADRGAFIDQSQSFNVHMSDPNSGKLTSLHFYAWKKGLKTGMYYLRSRAAADAIKFTVD-- 780
Query: 775 VLNNEKANRADNDVEANL-AQVVCSLKNQEECMACGS 810
V + ++ + EA L A++ CSL N+++C+ CG+
Sbjct: 781 VKQKQVTKMSEEEKEAYLAAKLQCSLTNKDDCVMCGA 817
>gi|302793891|ref|XP_002978710.1| hypothetical protein SELMODRAFT_109545 [Selaginella moellendorffii]
gi|300153519|gb|EFJ20157.1| hypothetical protein SELMODRAFT_109545 [Selaginella moellendorffii]
Length = 786
Score = 1222 bits (3162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/776 (73%), Positives = 671/776 (86%), Gaps = 28/776 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDG++E V FDKITARLKKLSY L+ ++CDPV+VAQKVCAGVYKGVTT+QLDELA
Sbjct: 1 MYVIKRDGKQEAVHFDKITARLKKLSYSLNPDYCDPVIVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT +HPDYA+LA R+ VSNLHK TK SFSET+K+MY++ ++RSG KA L+A+DV
Sbjct: 61 AETAASMTTSHPDYAILAARIVVSNLHKKTKKSFSETVKEMYSHVDERSGLKAPLIANDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+IIMKNAA LD IIYDRDFD+DYFGFKTLERSYLLK++ RVVERPQHMLMRVSVGIHK
Sbjct: 121 YDIIMKNAAKLDSEIIYDRDFDYDYFGFKTLERSYLLKVNGRVVERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A+KTYHLMSQ WFTHA+PTLFNAGTP+PQLSSCFLLCMK+DSIEGIYDTLK+CA+
Sbjct: 181 EDIEAAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLLCMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLS+HNIRA+ SYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRK
Sbjct: 241 ISKSAGGIGLSVHNIRATNSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK------ 294
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
D+F++LDL+KN GKEE RARDLFY LW+PDLFMERVR + WSLFCP++A GLA
Sbjct: 295 ------DVFDWLDLKKNHGKEENRARDLFYGLWIPDLFMERVRSNSDWSLFCPNEAPGLA 348
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EGRAK +SA+KLWF IL SQ+ETG PYM+FKD+CNRKSNQQNL
Sbjct: 349 DCWGEEFESLYTRYEREGRAKRSLSAQKLWFAILESQMETGNPYMVFKDTCNRKSNQQNL 408
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++SP ETAVCNLASIALPR+VRE+G+ +S+ +L
Sbjct: 409 GTIKCSNLCTEIVEYTSPSETAVCNLASIALPRFVREQGI-------------NSETKLV 455
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D +VT ++TENLNKIID+N+YP++T +RSNLRHRPIGIG+QGLAD FILLGLPF+S
Sbjct: 456 D---CFQVTTVVTENLNKIIDINYYPVDTAKRSNLRHRPIGIGVQGLADAFILLGLPFDS 512
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LNKDIFETIYYHA+K S+ LA G YETY GSP+SKG+ Q DMWN+ PS RWDW
Sbjct: 513 EEARDLNKDIFETIYYHAMKTSSVLAELYGVYETYPGSPVSKGVFQPDMWNVIPSGRWDW 572
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+EM++++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEF+VVNKHL
Sbjct: 573 PALKEMVARHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKHL 632
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLT+LG+W+ LK K++ NGS+ I IP++LK IY+TVWEIKQ+T+VDMA +RG Y
Sbjct: 633 LNDLTDLGIWTPDLKNKVMAYNGSIQSIEGIPDDLKQIYRTVWEIKQRTIVDMAVERGAY 692
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHMEQP KLTSLHF+AWS G+KTGMYYLR++AAADAIKFTVDT+ L
Sbjct: 693 IDQSQSLNIHMEQPTTTKLTSLHFHAWSGGLKTGMYYLRSQAAADAIKFTVDTASL 748
>gi|303273186|ref|XP_003055954.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462038|gb|EEH59330.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 816
Score = 1218 bits (3152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/818 (69%), Positives = 684/818 (83%), Gaps = 10/818 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+EPV FDKITAR+ KL+YGL+++HCDPVLVAQKV +GVYKGVTT++LDELA
Sbjct: 1 MYVVKRDGRQEPVHFDKITARINKLAYGLNQDHCDPVLVAQKVASGVYKGVTTSELDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT HPDYA LA R+AVSNLHK T SFSET+K M+ + NKR+GK + L+ADDV
Sbjct: 61 AETAASMTSKHPDYAQLAARIAVSNLHKNTLKSFSETMKVMHEHVNKRNGKWSPLLADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEII NAA D I+YDRDFD+DYFG+KTLERSYLL++D ++VERPQH+LMRV++GIHK
Sbjct: 121 YEIIKANAATFDAEIVYDRDFDYDYFGYKTLERSYLLRVDGKIVERPQHLLMRVAIGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D + A+ TYH++S+ W THA+PTLFN+GTP+PQLSSCFL+ MK+DSIEGIYDTLK+CA
Sbjct: 181 D-VEKAIDTYHMLSERWMTHASPTLFNSGTPRPQLSSCFLIAMKEDSIEGIYDTLKECAC 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLSIH+IRA+ SYI GTNG+SNGI+PML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 240 ISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAVY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF++LDLRKN GKEE RARDLFY LW DLFM RV +G W+L CP++ GLA
Sbjct: 300 LEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMRRVESNGDWTLMCPNECPGLA 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
DSWG EFE LY+ YEE+G+ K I A++LWF IL +Q+ETG PYMLFKD+CN KSNQQNL
Sbjct: 360 DSWGAEFEKLYTSYEEQGKGKKTIKAQQLWFAILEAQVETGNPYMLFKDACNSKSNQQNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREK--GVPV-QSNVSKLVGSRDSKN 477
GTI+SSNLCTEIVEF+SPEETAVCNLASIALPR+V E+ P ++ KL GS + +
Sbjct: 420 GTIRSSNLCTEIVEFTSPEETAVCNLASIALPRFVVEENPASPTGRTEAKKLRGSLGAAS 479
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
R FD +LAE+T+ +T NLN+IIDVN+YP+ET RRSN+RHRPIG+G+QGLAD FILLGL
Sbjct: 480 RTFDHAKLAEITRKVTRNLNRIIDVNYYPVETARRSNMRHRPIGLGVQGLADVFILLGLA 539
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP--- 594
F+SPEAQ+LN +IFETIY+ AL S +A DG YETY GSP+SKGILQ DMW +T
Sbjct: 540 FDSPEAQKLNAEIFETIYFAALTESNAIAAVDGHYETYPGSPVSKGILQPDMWGVTEMPG 599
Query: 595 SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFI 654
DR DW++LR I+ +GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF
Sbjct: 600 GDRHDWAALRAKIATSGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYARRVLSGEFT 659
Query: 655 VVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMA 714
VVN+HLL DLTELGLW LK ++I NGSV + +IP+ LKAIYKTVWEIKQ+ LVDMA
Sbjct: 660 VVNQHLLNDLTELGLWDPKLKNELIANNGSVQGL-DIPDHLKAIYKTVWEIKQRVLVDMA 718
Query: 715 ADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
ADRG +IDQSQS N+HM + GKLTSLHFYAW KG+KTGMYYLR+RAAADA+KFTVD +
Sbjct: 719 ADRGAFIDQSQSFNVHMSDANSGKLTSLHFYAWKKGLKTGMYYLRSRAAADAVKFTVDQA 778
Query: 775 VLNN-EKANRADNDVEANL-AQVVCSLKNQEECMACGS 810
N +K+ D + EA + A++ CSL N++EC+ CG+
Sbjct: 779 GKGNAQKSADPDMEEEARMAAKLACSLANKDECVMCGA 816
>gi|255070623|ref|XP_002507393.1| ribonucleoside-diphosphate reductase [Micromonas sp. RCC299]
gi|226522668|gb|ACO68651.1| ribonucleoside-diphosphate reductase [Micromonas sp. RCC299]
Length = 841
Score = 1206 bits (3119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/841 (67%), Positives = 687/841 (81%), Gaps = 33/841 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+EPV FDKITAR+ KL+YGL++E CDPVLVAQKV GVYKGVTT++LDELA
Sbjct: 3 MYVVKRDGRQEPVHFDKITARINKLAYGLNQEFCDPVLVAQKVAVGVYKGVTTSELDELA 62
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT HPDYA LA R+AVSNLHK T SFSET+K MY + NKR+GK + L+ADDV
Sbjct: 63 AETAASMTSKHPDYAQLAARIAVSNLHKNTLKSFSETMKVMYEHVNKRNGKWSPLLADDV 122
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEII +NA D I+YDRDFD+DYFG+KTLERSYLL++D ++VERPQH+LMRV++GIHK
Sbjct: 123 YEIIKENADRFDSEIVYDRDFDYDYFGYKTLERSYLLRVDGKIVERPQHLLMRVAIGIHK 182
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D + A+ TYH++S+ W THA+PTLFN+GTP+PQLSSCFL+ MK+DSIEGIYDTLK+CA
Sbjct: 183 D-VEKAIDTYHMLSERWMTHASPTLFNSGTPRPQLSSCFLIAMKEDSIEGIYDTLKECAC 241
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLSIH+IRA+ SYI GTNG+SNGI+PML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 242 ISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 301
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF++LDLRKN GKEE RARDLFY LW DLFM+RV +G+W+LFCP++A GLA
Sbjct: 302 LEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMKRVEANGEWTLFCPNEAPGLA 361
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY +YE EG+ K + A++LWF IL SQ+ETG PYMLFKD+CNRKSNQQNL
Sbjct: 362 DCWGEEFEALYEKYEAEGKGKKTVKAQQLWFAILESQVETGNPYMLFKDACNRKSNQQNL 421
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVRE---KGVPVQSNVSKLVGSRDSKN 477
GTI+SSNLCTEIVE++SPEETAVCNLASIALPR+V E + ++ KL GS + N
Sbjct: 422 GTIRSSNLCTEIVEYTSPEETAVCNLASIALPRFVIENNPQSPTGRTEAKKLRGSIGAAN 481
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
R FD ++LAE+T+ +T NLN+IIDVN+YP+ET RRSN++HRPIG+G+QGLAD FILLG+P
Sbjct: 482 RYFDHDKLAEITRKVTRNLNRIIDVNYYPVETARRSNMKHRPIGLGVQGLADVFILLGMP 541
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP--- 594
F+SPEA++LN +IFETIY+ AL S ++A +DG YE+Y GSP+S G+LQ DMW +T
Sbjct: 542 FDSPEAKKLNAEIFETIYFAALTESNDIAKRDGTYESYPGSPVSNGVLQPDMWGLTEMPG 601
Query: 595 SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFI 654
DR DW+ LR IS++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF
Sbjct: 602 GDRHDWTGLRTKISEHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYARRVLSGEFT 661
Query: 655 VVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMA 714
VVN+HLL DLTE+GLW +LK ++I NGSV + +IP+ LK IYKTVWEIKQ+ LVDMA
Sbjct: 662 VVNQHLLSDLTEMGLWDPSLKNELIANNGSVQSL-DIPDNLKEIYKTVWEIKQRILVDMA 720
Query: 715 ADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
ADRG +IDQSQS N+HM + GKLTSLHFYAW KG+KTGMYYLR+RAAADA+KFTVD +
Sbjct: 721 ADRGAFIDQSQSFNVHMSDANSGKLTSLHFYAWKKGLKTGMYYLRSRAAADAVKFTVDPN 780
Query: 775 VL--------------------NNEKANRA--DNDVEAN---LAQVVCSLKNQEECMACG 809
+ N E A + D D+E A++ CSL N++EC+ CG
Sbjct: 781 SVKAKNASSKKEVVGDKENQPANGEGAKKGPVDPDMEEEALMAAKIACSLANKDECVMCG 840
Query: 810 S 810
+
Sbjct: 841 A 841
>gi|159485006|ref|XP_001700540.1| ribonucleoside-diphosphate reductase large subunit [Chlamydomonas
reinhardtii]
gi|158272180|gb|EDO97984.1| ribonucleoside-diphosphate reductase large subunit [Chlamydomonas
reinhardtii]
Length = 878
Score = 1202 bits (3110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/798 (70%), Positives = 674/798 (84%), Gaps = 4/798 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+EPV FDKITAR+ KL+YGL+ + CD VLVAQKV GVYKGVTT++LDELA
Sbjct: 4 MYVLKRDGRQEPVMFDKITARIVKLAYGLNPDFCDAVLVAQKVAGGVYKGVTTSELDELA 63
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAA+T HPDYA+LA R+AVSNLHK T+ SFS+T+ +Y Y N R+G++A+L+A DV
Sbjct: 64 AETAAALTSTHPDYAILAARIAVSNLHKNTEKSFSKTMDKLYTYRNPRNGEEAALIAKDV 123
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II++NA LD I YDRDFD+DYFGFKTLERSYLL++D +VVERPQHMLMRV+VGIHK
Sbjct: 124 YDIIVQNAQRLDSEIRYDRDFDYDYFGFKTLERSYLLRIDGKVVERPQHMLMRVAVGIHK 183
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +SA+ TYH MS+ WFTHA+PTLFN GTP+PQLSSCFLL M+DDSI+GIYDTLK+CA+
Sbjct: 184 EDIESAITTYHAMSERWFTHASPTLFNGGTPRPQLSSCFLLAMRDDSIDGIYDTLKECAV 243
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLSIH IR +GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 244 ISKSAGGIGLSIHCIRGTGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 303
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHAD+F+FLDLRKN GKEE RARDLFY LW+PDLFMERV D +WSLFCP++A GLA
Sbjct: 304 MEPWHADVFDFLDLRKNHGKEEARARDLFYGLWIPDLFMERVEADKEWSLFCPNEAPGLA 363
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY +YE+EGR++ V+ A++LWF IL +Q+ETG PYML+KD CNRKSNQQNL
Sbjct: 364 DCWGEEFERLYLKYEQEGRSRRVVRAQQLWFAILEAQVETGNPYMLYKDHCNRKSNQQNL 423
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI+E++SP+E AVCNLASIALPR+VRE+G KLVGS D+ NR F
Sbjct: 424 GTIKCSNLCTEIIEYTSPDEIAVCNLASIALPRFVRERGSQPGWESKKLVGSLDAANRFF 483
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+LAE+TK++T NLNKIIDVN+YP +RSN+RHRPIG+G+QGLADTFILLG+ F+S
Sbjct: 484 DFEKLAEMTKMVTRNLNKIIDVNYYPHPKAQRSNMRHRPIGLGVQGLADTFILLGMAFDS 543
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS---DR 597
PEA +LN+ IFE +Y+ AL S ELA +DGPYETY GSP+S+G+LQ DMW + P+ R
Sbjct: 544 PEAAELNRQIFEVVYHAALSTSCELAERDGPYETYAGSPVSQGVLQPDMWGVKPTGVDGR 603
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
+W LR I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF VVN
Sbjct: 604 CNWEELRNRIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFTVVN 663
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
+HLL DL +G+WS LK +++ NGSV ++ EIPEELK +YKTVWEIKQ+TLVDMAADR
Sbjct: 664 QHLLHDLNRMGIWSADLKNELVAANGSVLEL-EIPEELKGLYKTVWEIKQRTLVDMAADR 722
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G YIDQSQS N+ M P+ GKLTSLHFYAW KG+KTGMYYLRT+AAADAIKFTVD L+
Sbjct: 723 GAYIDQSQSFNVFMPDPNFGKLTSLHFYAWRKGLKTGMYYLRTKAAADAIKFTVDQQALS 782
Query: 778 NEKANRADNDVEANLAQV 795
+K + + A Q+
Sbjct: 783 KKKTTQGTSAATAATPQM 800
>gi|52000447|dbj|BAD44751.1| NSG5 protein [Chlamydomonas reinhardtii]
Length = 878
Score = 1201 bits (3107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/798 (70%), Positives = 674/798 (84%), Gaps = 4/798 (0%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+EPV FDKITAR+ KL+YGL+ + CD VLVAQKV GVYKGVTT++LDELA
Sbjct: 4 MYVLKRDGRQEPVMFDKITARIVKLAYGLNPDFCDAVLVAQKVAGGVYKGVTTSELDELA 63
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAA+T HPDYA+LA R+AVSNLHK T+ SFS+T+ +Y Y N R+G++A+L+A DV
Sbjct: 64 AETAAALTSTHPDYAILAARIAVSNLHKNTEKSFSKTMDKLYTYRNPRNGEEAALIAKDV 123
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II++NA LD I YDRDFD+DYFGFKTLERSYLL++D +VVERPQHMLMRV+VGIHK
Sbjct: 124 YDIIVQNAQRLDSEIRYDRDFDYDYFGFKTLERSYLLRIDGKVVERPQHMLMRVAVGIHK 183
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A+ TYH MS+ WFTHA+PTLFN GTP+PQLSSCFLL M+DDSI+GIYDTLK+CA+
Sbjct: 184 EDIEAAITTYHAMSERWFTHASPTLFNGGTPRPQLSSCFLLAMRDDSIDGIYDTLKECAV 243
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLSIH IR +GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 244 ISKSAGGIGLSIHCIRGTGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 303
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHAD+F+FLDLRKN GKEE RARDLFY LW+PDLFMERV D +WSLFCP++A GLA
Sbjct: 304 MEPWHADVFDFLDLRKNHGKEEARARDLFYGLWIPDLFMERVEADKEWSLFCPNEAPGLA 363
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY +YE+EGR++ V+ A++LWF IL +Q+ETG PYML+KD CNRKSNQQNL
Sbjct: 364 DCWGEEFERLYLKYEQEGRSRRVVRAQQLWFAILEAQVETGNPYMLYKDHCNRKSNQQNL 423
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI+E++SP+E AVCNLASIALPR+VRE+G KLVGS D+ NR F
Sbjct: 424 GTIKCSNLCTEIIEYTSPDEIAVCNLASIALPRFVRERGSQPGWESKKLVGSLDAANRFF 483
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+LAE+TK++T NLNKIIDVN+YP +RSN+RHRPIG+G+QGLADTFILLG+ F+S
Sbjct: 484 DFEKLAEMTKMVTRNLNKIIDVNYYPHPKAQRSNMRHRPIGLGVQGLADTFILLGMAFDS 543
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS---DR 597
PEA +LN+ IFE +Y+ AL S ELA +DGPYETY GSP+S+G+LQ DMW + P+ R
Sbjct: 544 PEAAELNRQIFEVVYHAALSTSCELAERDGPYETYAGSPVSQGVLQPDMWGVKPTGVDGR 603
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
+W LR I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF VVN
Sbjct: 604 CNWEELRNRIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFTVVN 663
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
+HLL DL +G+WS LK +++ NGSV ++ EIPEELK +YKTVWEIKQ+TLVDMAADR
Sbjct: 664 QHLLHDLNRMGIWSADLKNELVAANGSVLEL-EIPEELKGLYKTVWEIKQRTLVDMAADR 722
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G YIDQSQS N+ M P+ GKLTSLHFYAW KG+KTGMYYLRT+AAADAIKFTVD L+
Sbjct: 723 GAYIDQSQSFNVFMPDPNFGKLTSLHFYAWRKGLKTGMYYLRTKAAADAIKFTVDQQALS 782
Query: 778 NEKANRADNDVEANLAQV 795
+K + + A Q+
Sbjct: 783 KKKTTQGTSAATAATPQM 800
>gi|256421018|ref|YP_003121671.1| ribonucleoside-diphosphate reductase subunit alpha [Chitinophaga
pinensis DSM 2588]
gi|256035926|gb|ACU59470.1| ribonucleoside-diphosphate reductase, alpha subunit [Chitinophaga
pinensis DSM 2588]
Length = 802
Score = 1165 bits (3015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/772 (70%), Positives = 644/772 (83%), Gaps = 20/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDG KE V+FDKITAR++KL YGL+ E+ D + VA+KV G+Y GVTT++LD LA
Sbjct: 1 MFVIKRDGHKEAVKFDKITARVEKLCYGLNAEYVDAIDVAKKVIQGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++T HPDYALLA R+AVSNLHK T SFS+T++++YNY + + GK A L+ADDV
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTVKSFSKTMENLYNYIDPKVGKPAPLLADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+MK+AA LD +IIYDRDF FDYFGFKTLERSYLLK+D +V ERPQHM MRVSVGIHK
Sbjct: 121 YEIVMKHAAILDSSIIYDRDFAFDYFGFKTLERSYLLKLDGKVAERPQHMFMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+ +KTY+LMS+ WFTHATPTLFNAGTP+PQ+SSCFLL M+DDSIEGIYDTLK+ A
Sbjct: 181 EDIDAVIKTYNLMSERWFTHATPTLFNAGTPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA+GSYI GTNG+SNGI+PML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYISGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFYALWVPDLFM RV ++G WSLFCP +A GL
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEMRARDLFYALWVPDLFMRRVEENGDWSLFCPHEAPGLH 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY++YE+E RA+ + A+ LWF +L++QIETGTPY+L+KDS NRKSNQQNL
Sbjct: 361 ECWGEEFEKLYTKYEKENRARKTVKAQDLWFAVLDAQIETGTPYLLYKDSANRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++ E AVCNLAS+ALPR+V + F
Sbjct: 421 GTIKSSNLCTEIIEYTDANEVAVCNLASLALPRFVIDGQ--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D E+L EVT NLN+IID N YP++ R SNLRHRPIG+G+QGLAD FIL+ PFES
Sbjct: 461 DHEKLYEVTYQAALNLNRIIDNNFYPVDEARNSNLRHRPIGLGVQGLADAFILMRYPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN +IFETIY+ AL AS +LA+KDG YETY GSP+SKGILQ DMW +TPS RWDW
Sbjct: 521 EEAKKLNSEIFETIYFAALNASKDLAIKDGAYETYAGSPVSKGILQFDMWGVTPSPRWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+SL+ I K+GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYTRRVLSGEF+VVNKHL
Sbjct: 581 TSLKGEIKKHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ELGLW + +K KII NGS+ I EIP ++K +YKTVWEIKQ+T++DMAADRG +
Sbjct: 641 LKDLVELGLWDNDMKNKIITSNGSIQHIPEIPSQIKELYKTVWEIKQRTIIDMAADRGAF 700
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
I QSQSLN+ ++ P KLTS+HFYAW KG+KTGMYYLRT+AAA A++FTV+
Sbjct: 701 ICQSQSLNLFVDTPSAAKLTSMHFYAWKKGLKTGMYYLRTQAAAQAVQFTVE 752
>gi|387789963|ref|YP_006255028.1| ribonucleoside-diphosphate reductase subunit alpha [Solitalea
canadensis DSM 3403]
gi|379652796|gb|AFD05852.1| ribonucleoside-diphosphate reductase, alpha subunit [Solitalea
canadensis DSM 3403]
Length = 788
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/810 (67%), Positives = 651/810 (80%), Gaps = 22/810 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR E V+FDKITAR++KLSYGL H D + VA+KV G+Y GVTT++LD LA
Sbjct: 1 MFVIKRDGRTESVKFDKITARIEKLSYGLDSNHVDSIDVAKKVIEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++TV HPDYALLA R+AVSNLHK T+ SFS+T++ +YNY + ++G A L++DDV
Sbjct: 61 AETAASLTVKHPDYALLASRIAVSNLHKNTEKSFSKTMERLYNYIDPKTGLNAQLLSDDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
EII +NA LD IIYDRDF FDYFGFKTLERSYLLK++ RV ERPQHM MRV+VGIHK
Sbjct: 121 IEIIRQNADTLDSNIIYDRDFAFDYFGFKTLERSYLLKLNGRVAERPQHMYMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D DS +KTY+LMS+ WFTHATPTLFNAGTP+PQ+SSCFLL MKDDSIEGIYDTLK+ A
Sbjct: 181 EDIDSVIKTYNLMSEKWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYISGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FLDLRKN GKEE RARDLFYALW+PDLFM+RV +G+WSLFCP +A GL
Sbjct: 301 LEPWHADIFDFLDLRKNHGKEELRARDLFYALWIPDLFMKRVESNGEWSLFCPHEAPGLY 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G +FE LY +YE+EG+A+ + A++LWF I++SQIETGTPYML+KD+ N+KSNQQNL
Sbjct: 361 DTYGDDFEALYERYEKEGKARKTVKAQELWFAIMDSQIETGTPYMLYKDAANKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+++ +E AVCNLASI+LP++V N F
Sbjct: 421 GTIKSSNLCTEIMEYTAEDEVAVCNLASISLPKFV--------------------INGEF 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L EVT T NLNKIID N+YP+E R SNLRHRP+G+GIQGLAD FI+L PFES
Sbjct: 461 DHQKLYEVTYQATLNLNKIIDGNYYPVEEARNSNLRHRPVGLGIQGLADVFIMLRHPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LN++I ETIY+ AL AS +LA DGPYETY GSP SKGILQ DMWN+TPS RWD+
Sbjct: 521 AEAQSLNREIAETIYFAALSASKDLAKVDGPYETYEGSPSSKGILQYDMWNVTPSKRWDF 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I K G+RNSLLVAPMPTASTSQI GNNECFEPYTSNIY RRVLSGEFIVVNKHL
Sbjct: 581 DGLKKEIKKYGIRNSLLVAPMPTASTSQIFGNNECFEPYTSNIYVRRVLSGEFIVVNKHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL L LW +K KII GS+ I EIP+ +K +YKTVWEIKQ+TL+DMAADRG Y
Sbjct: 641 LKDLVALNLWDGQMKNKIIAAEGSIQDIKEIPQHIKELYKTVWEIKQRTLIDMAADRGAY 700
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
QSQSLN+ ++ P++ KLTS+HFYAW KG+KTGMYYLRT+AA A+KFTV+ +
Sbjct: 701 TCQSQSLNLFVQSPNNAKLTSMHFYAWKKGLKTGMYYLRTQAANAAVKFTVEKQAEKQLE 760
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
VE + VC++ +E C+ C +
Sbjct: 761 PMVQHTGVEEEITGPVCTM--EEGCVTCSA 788
>gi|412993613|emb|CCO14124.1| Ribonucleoside-diphosphate reductase subunit [Bathycoccus prasinos]
Length = 816
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/805 (67%), Positives = 658/805 (81%), Gaps = 32/805 (3%)
Query: 37 VLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSE 96
VLVAQKVC GVY GVTT +LDELAAETAAAMT HPDYA LA R+AVSNLHK T SFS
Sbjct: 13 VLVAQKVCQGVYPGVTTAELDELAAETAAAMTSKHPDYAQLAARIAVSNLHKTTDKSFST 72
Query: 97 TIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYL 156
T+K MY + N R+GK + L+ADDVYEII +NA D I+YDRDFD+DYFGFKTLERSYL
Sbjct: 73 TMKKMYEHTNHRNGKWSPLLADDVYEIITENAERFDAEIVYDRDFDYDYFGFKTLERSYL 132
Query: 157 LKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLS 216
L++D +VVERPQHMLMRVS+GIHK D + A+ TYH++S+ W THA+PTLFNAGTP+PQLS
Sbjct: 133 LRIDGKVVERPQHMLMRVSIGIHKKDIEKAVDTYHMLSERWMTHASPTLFNAGTPRPQLS 192
Query: 217 SCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPML 276
SCFL+CMK+DSIEGIYDTLK+CA ISKSAGGIGLSIH+IRA+ SYI GTNG+SNGI+PML
Sbjct: 193 SCFLICMKEDSIEGIYDTLKECACISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPML 252
Query: 277 QVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPD 336
+VFNDTARYVDQGGGKRKGAFAIYLEPWH+DIF++LDLRKN GKEE RARDLFY LW D
Sbjct: 253 RVFNDTARYVDQGGGKRKGAFAIYLEPWHSDIFDWLDLRKNHGKEEARARDLFYGLWTND 312
Query: 337 LFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNS 396
LFM+RV ++GKW+L CP++ GL++ WG EFE LY++YE+E + K I+A++LWF IL +
Sbjct: 313 LFMKRVEENGKWTLMCPNECPGLSECWGEEFEALYTKYEKENKGKKTINAQQLWFAILEA 372
Query: 397 QIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVR 456
Q+ETG PYMLFKD+CNRKSNQQNLGTIKSSNLCTEIVEF+SPEETAVCNLASIALPR+V
Sbjct: 373 QVETGNPYMLFKDACNRKSNQQNLGTIKSSNLCTEIVEFTSPEETAVCNLASIALPRFVI 432
Query: 457 EK--GVPV-QSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRS 513
EK P ++ KL+GS + +R FD +L+E+T+ +T NLN+IIDVN+YP+ET +RS
Sbjct: 433 EKNESSPTGKTETKKLLGSLRASDRYFDHAKLSEITRKVTRNLNRIIDVNYYPVETAKRS 492
Query: 514 NLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYE 573
N++HRPIG+G+QGLAD FILLGLPF+SPEAQ+LN +IFETIY+ AL+ S ELA ++G YE
Sbjct: 493 NMKHRPIGLGVQGLADVFILLGLPFDSPEAQKLNAEIFETIYFAALQESNELAKEEGTYE 552
Query: 574 TYFGSPMSKGILQVDMWNITP---SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQIL 630
+Y GSP+SKG+LQ DMW +T DR WS+LRE I+K+GVRNSLLVAPMPTASTSQIL
Sbjct: 553 SYEGSPVSKGVLQPDMWGVTEMPGGDRHGWSALRESIAKHGVRNSLLVAPMPTASTSQIL 612
Query: 631 GNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISE 690
GNNECFEPYTSNIY RRVLSGEF VVN+HLL DLTE+GLW LK +I +NGSV + +
Sbjct: 613 GNNECFEPYTSNIYARRVLSGEFTVVNQHLLSDLTEMGLWDPTLKNSLISDNGSVVNL-D 671
Query: 691 IPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKG 750
IP+ LKAIYKTVWEIKQ+ LVDMAA RG +IDQSQS N+HM + GKLTSLHF+AW G
Sbjct: 672 IPDNLKAIYKTVWEIKQRILVDMAAARGAFIDQSQSFNVHMSDANSGKLTSLHFHAWKSG 731
Query: 751 MKTGMYYLRTRAAADAIKFTVDTS----------VL--------------NNEKANRADN 786
+KTGMYYLR+RAAADAIKFTVD + VL E + ++
Sbjct: 732 LKTGMYYLRSRAAADAIKFTVDPTKAAKKVEKENVLKPSNGGPKPTAVPTKKEVSEMSEA 791
Query: 787 DVEANL-AQVVCSLKNQEECMACGS 810
+ EA++ A++ CSL+N++EC+ CGS
Sbjct: 792 EQEAHMAAKLKCSLENKDECLMCGS 816
>gi|436833879|ref|YP_007319095.1| ribonucleoside-diphosphate reductase, alpha subunit [Fibrella
aestuarina BUZ 2]
gi|384065292|emb|CCG98502.1| ribonucleoside-diphosphate reductase, alpha subunit [Fibrella
aestuarina BUZ 2]
Length = 825
Score = 1150 bits (2976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/772 (69%), Positives = 645/772 (83%), Gaps = 16/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGR+E V+FDKITAR++KL YGL + PV VA KV G+Y GV TT+LD LA
Sbjct: 1 MYVIKRDGRRESVKFDKITARIEKLCYGLDPAYVQPVEVAMKVVNGLYDGVKTTELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT HPDYA+LA RVA+SNLHK T SFS TIK +Y Y + ++G+ ASL++ +V
Sbjct: 61 AETAASMTTKHPDYAILAARVAISNLHKETNKSFSGTIKRLYTYIDPKTGENASLISKEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I NAA LD IIYDRD+ +DYFG+KTLE+SYLLK+D R+ ERPQHMLMRV+VGIH
Sbjct: 121 YDVIRNNAAVLDSTIIYDRDYGYDYFGYKTLEKSYLLKIDGRIAERPQHMLMRVAVGIHM 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD D+A++TY+L+S+ WFTHATPTLFNAGTP+PQ+SSCFLL MKDDSIEGIYDTLK+ A
Sbjct: 181 DDIDAAIETYNLLSEKWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+G+YI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRATGTYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FL L+KN GKEE RARDLFYA+W PDLFM+RV D+ WSLFCP + GL+
Sbjct: 301 LEPWHADIFDFLQLKKNHGKEELRARDLFYAIWTPDLFMKRVEDNDTWSLFCPHECPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G EFE LY++YE EGRA+ + A++LWFEIL +Q ETGTPYML+KD+ NRKSNQ+NL
Sbjct: 361 DAYGDEFEELYTRYEREGRARRTVKAQELWFEILEAQTETGTPYMLYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP+E AVCNLASIALP+++ KG D R F
Sbjct: 421 GTIKSSNLCTEIMEYTSPDEVAVCNLASIALPKFI-TKGT-------------DGILR-F 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L EVT+I T NLNKIID+N+YP+E RRSN+RHRPIG+G+QGLAD FI+L +PFES
Sbjct: 466 DHQKLMEVTQIATRNLNKIIDLNYYPVEEARRSNMRHRPIGLGVQGLADAFIMLRMPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA++LN+DIFETIYY A+ AS ELA KDGPYET+ GSP+S G Q DMW +TP S RWD
Sbjct: 526 DEARRLNEDIFETIYYGAMTASMELAKKDGPYETWKGSPISNGEFQFDMWGVTPKSGRWD 585
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W++LR + ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYTRRVLSGEF+VVNKH
Sbjct: 586 WNALRTQVVEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 645
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL+DL +LGLW+ A+K +I NGSV I IP+ LK +YKTVWEIKQK ++DMAADRG
Sbjct: 646 LLRDLVKLGLWNEAMKNNLILANGSVQDIPNIPQHLKDLYKTVWEIKQKHIIDMAADRGA 705
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
YI QSQSLNIH++ + GKLTS+HFYAW G+KTGMYYLRT+AA DA+KFTV
Sbjct: 706 YICQSQSLNIHIQDANFGKLTSMHFYAWKAGLKTGMYYLRTKAATDAVKFTV 757
>gi|328770641|gb|EGF80682.1| hypothetical protein BATDEDRAFT_16482 [Batrachochytrium
dendrobatidis JAM81]
Length = 796
Score = 1150 bits (2976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/813 (65%), Positives = 657/813 (80%), Gaps = 24/813 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V FDKIT+R+ KL YGL + DP VAQKV GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRRERVAFDKITSRINKLCYGLDMNYVDPAEVAQKVVTGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A +T HPDYA+LA R+A+SNLHK TK FS ++D+Y Y N ++ K + +++
Sbjct: 61 AETTAYLTTKHPDYAILAARIAISNLHKETKKQFSSVMQDLYEYVNPKNNKHSPMISKTT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++ I+KNA L+ AIIYDRDF++++FGFKTLERSYLL+++ + ERPQHMLMRV+VGIH
Sbjct: 121 FDCILKNADRLNSAIIYDRDFNYNFFGFKTLERSYLLRINRKTAERPQHMLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD ++ ++TY+LMS+ +FTHA+PTLFNAGTP PQ+SSCFLL ++DDSIEGIY TLK CA+
Sbjct: 181 DDVEAVIETYNLMSEKYFTHASPTLFNAGTPNPQMSSCFLLTIEDDSIEGIYSTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IR+SGSYI GTNG SNGI+PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHKIRSSGSYIAGTNGLSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLFYALW+PD+FM RV +G WSLFCP++A GL
Sbjct: 301 LEPWHADVFEFLDLRKNTGKEENRARDLFYALWIPDMFMRRVESNGDWSLFCPAEAPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EF+ LY +YE EGRA+ +I A+KLW+ IL+SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DVWGDEFDALYEKYEREGRARKIIKAQKLWYAILDSQSETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVRE--KGVPVQSNVSKLVGSRDSKNR 478
GTIK SNLCTEIVE+SSP+E AVCNLAS+ALP +V + G PV
Sbjct: 421 GTIKCSNLCTEIVEYSSPDEVAVCNLASLALPNFVIKDTTGAPV---------------- 464
Query: 479 LFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
FDF+++ + TKI T NLNKII++N+YP+E +RSN+RHRPIG+G+QGLADTFI + +PF
Sbjct: 465 -FDFDKMIDTTKIATYNLNKIINLNYYPVEQAKRSNMRHRPIGLGVQGLADTFIKMRMPF 523
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW 598
+SPEA++LN IFE IY+ AL AS ELA +DGPYETY GSPMSKGI+Q DMWN+ SD++
Sbjct: 524 DSPEAKKLNIQIFEAIYFAALTASCELAKRDGPYETYSGSPMSKGIIQPDMWNVKVSDQF 583
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
DW +LR I+K GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY RRVLSGEF +VN+
Sbjct: 584 DWPTLRANIAKYGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYIRRVLSGEFQIVNQ 643
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
HLLKDLTELGLW+ ++K +II NGS+ I IP +LKAIYKTVWEI QK ++DMAADRG
Sbjct: 644 HLLKDLTELGLWNESMKNRIISANGSIQNIPSIPAQLKAIYKTVWEISQKVIIDMAADRG 703
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN 778
+IDQSQSLNIH+ + ++GKLTS+HFY W KG+KTGMYYLR+R AADAIKFTVD L
Sbjct: 704 AFIDQSQSLNIHLAEVNYGKLTSMHFYGWHKGLKTGMYYLRSRPAADAIKFTVDKQSLTQ 763
Query: 779 EKANRADNDVEA---NLAQVVCSLKNQEECMAC 808
++ N+V A N+ ++CSL+N++ CM+C
Sbjct: 764 GAEDK--NNVVASVNNMTDMLCSLENRDACMSC 794
>gi|392968362|ref|ZP_10333778.1| ribonucleoside-diphosphate reductase, alpha subunit [Fibrisoma limi
BUZ 3]
gi|387842724|emb|CCH55832.1| ribonucleoside-diphosphate reductase, alpha subunit [Fibrisoma limi
BUZ 3]
Length = 827
Score = 1150 bits (2975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/843 (64%), Positives = 665/843 (78%), Gaps = 49/843 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V+FDKITAR++KL YGL + PV VA KV G+Y GV TT+LD LA
Sbjct: 1 MYVVKRDGRRESVKFDKITARIEKLCYGLDSTYVQPVEVAMKVVNGLYDGVKTTELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT HPDYA+LA R+A+SNLHK T SFS TIK +Y Y + ++G+ ASL++ +V
Sbjct: 61 AETAASMTTKHPDYAILAARIAISNLHKETNKSFSSTIKRLYTYEDPKTGENASLISKEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE++ K+AA LD IIYDRD+ +DYFG+KTLE+SYLLK+D ++ ERPQHMLMRV+VGIH
Sbjct: 121 YEVVRKHAALLDSTIIYDRDYGYDYFGYKTLEKSYLLKIDGKIAERPQHMLMRVAVGIHM 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A++TY+L+S+ WFTHATPTLFNAGTP+PQ+SSCFLL MKDDSIEGIYDTLK+ A
Sbjct: 181 EDVEAAIETYNLLSEKWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+G+YI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRATGTYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDL+KN GKEE RARDLFYALW PDLFM+RV + WSLFCP + GLA
Sbjct: 301 LEPWHADIFEFLDLKKNHGKEELRARDLFYALWTPDLFMKRVEANDVWSLFCPHECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE EGRA+ + A+ LW+EIL SQ ETGTPYML+KD+ NRKSNQ+NL
Sbjct: 361 DCYGDEFEELYTRYEREGRARRTVKAQDLWYEILESQTETGTPYMLYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRL- 479
GTIKSSNLCTEI+E++SP+E AVCNLASIALP++++ RD L
Sbjct: 421 GTIKSSNLCTEIIEYTSPDEVAVCNLASIALPKFIK----------------RDPDGVLR 464
Query: 480 FDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFE 539
FD ++L E+TK+ T+NLNKIID+N+YP+E RRSN+RHRPIG+G+QGLAD FI+L +PFE
Sbjct: 465 FDHQKLFEITKVATKNLNKIIDLNYYPVEEARRSNMRHRPIGLGVQGLADAFIMLRMPFE 524
Query: 540 SPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRW 598
S EA++LN+DIFETIY+ A+ AS E A GPYET+ GSP+S+GI Q DMW +TP S+RW
Sbjct: 525 SEEARRLNEDIFETIYFGAMTASMEEAKTYGPYETWKGSPISQGIFQFDMWGVTPKSNRW 584
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
+W +LR+ + ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYTRRVLSGEF+VVNK
Sbjct: 585 NWEALRKDVVEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNK 644
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
HLLKDL +LGLW+ A+K +I NGSV I IP+ +K +YKTVWEIKQK ++DMAADRG
Sbjct: 645 HLLKDLVKLGLWNDAMKNNLILANGSVQAIPGIPQHIKDLYKTVWEIKQKHIIDMAADRG 704
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV------- 771
YI QSQSLNIH++ + GKLTS+HFYAW G+KTGMYYLRT+AAADA+KFTV
Sbjct: 705 AYICQSQSLNIHIQDANFGKLTSMHFYAWKAGLKTGMYYLRTKAAADAVKFTVVQPQAEP 764
Query: 772 ----------------DTSVLNNEKANRAD--------NDVEANLAQVVCSLKNQEECMA 807
D E A +DVE N A + CSL + E C
Sbjct: 765 QLEPALAETAPVEKPLDYVQYAKEHAVMQPKPEPLPMVSDVEQNYAAMTCSLDDPEGCEM 824
Query: 808 CGS 810
CGS
Sbjct: 825 CGS 827
>gi|343084826|ref|YP_004774121.1| ribonucleoside-diphosphate reductase subunit alpha [Cyclobacterium
marinum DSM 745]
gi|342353360|gb|AEL25890.1| ribonucleoside-diphosphate reductase, alpha subunit [Cyclobacterium
marinum DSM 745]
Length = 798
Score = 1147 bits (2968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/814 (66%), Positives = 662/814 (81%), Gaps = 20/814 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDGR+E VRFDKIT R++ L Y L + P+ VA+KV G+Y GVTTT+LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITTRIENLCYELDARYIHPIEVAKKVIDGLYDGVTTTELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE A++TV HPDYA+LA R+A+SNLHK T SFS T+K +Y Y N ++ + A+L+A DV
Sbjct: 61 AEVCASLTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTYINPKTDENAALIAPDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+ K+AA LD I Y RDFD+D+FGFKTLERSYL+K+D +VVERPQHMLMRVS+GIHK
Sbjct: 121 YGIVKKHAAKLDQVIDYSRDFDYDFFGFKTLERSYLIKLDGKVVERPQHMLMRVSIGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TYHL+SQ WFTHATPTLFNAGTP+PQLSSCFLL MKDDSI+GIYDTLK+CA
Sbjct: 181 EDIDAAIETYHLLSQKWFTHATPTLFNAGTPKPQLSSCFLLTMKDDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA GSYI GTNG SNGIVPML+ F+ TARYVDQGGGKRKG+FAIY
Sbjct: 241 ISQSAGGIGLSIHNVRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI +FLDL+KN GK+E RARDLFYA+WV DLFM+RV + +WSLFCP +A GLA
Sbjct: 301 LEPWHADIKDFLDLKKNHGKDELRARDLFYAVWVSDLFMKRVEANEEWSLFCPHEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D G EFE LY +YE+EGRA+ I A++LWFEIL SQIETGTPY+L+KD+ N KSNQ+NL
Sbjct: 361 DCHGEEFERLYEKYEKEGRARETIKAQELWFEILESQIETGTPYILYKDAANGKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP+E AVCNLAS+ALP++V +D K F
Sbjct: 421 GTIKSSNLCTEIMEYTSPDEVAVCNLASLALPKFVST--------------GKDGKKH-F 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L EVTK++T+NLNK+IDVN+YP+ R+SN RHRP+G+GIQGLADTFILL +PF+S
Sbjct: 466 DHQKLYEVTKVVTKNLNKVIDVNYYPVPEARKSNFRHRPVGLGIQGLADTFILLRMPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA+ LN+DIFETIY+ +++ S ELA +G YETY GSP+SKG+ Q DMW +TP S RW+
Sbjct: 526 EEAKGLNEDIFETIYFASMETSMELAKINGTYETYEGSPVSKGLFQFDMWGVTPKSGRWN 585
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W+ L+E ++K GVRNSLLVAPMPTASTSQILGNNECFEPYT+NIYTRR LSGEF+VVNKH
Sbjct: 586 WTGLKEKVNKYGVRNSLLVAPMPTASTSQILGNNECFEPYTTNIYTRRTLSGEFVVVNKH 645
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
L+KDL LGLW+ +K ++I NGSV + +IP+ LK +YKTVWEI QK ++DMAADRG
Sbjct: 646 LMKDLIRLGLWTDGMKNRLIASNGSVQDMPDIPQNLKDLYKTVWEISQKVIIDMAADRGA 705
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
Y+ QSQS+N+ +++P+ GKLTS+HFYAW KG+KTG+YYLR++AA+ AIKFTVD S LN++
Sbjct: 706 YVCQSQSMNLFLQEPNFGKLTSMHFYAWKKGLKTGIYYLRSKAASSAIKFTVDKSQLNDD 765
Query: 780 KANRADNDVEANLAQ---VVCSLKNQEECMACGS 810
K D D EA Q +VCSL N +EC ACGS
Sbjct: 766 KQTAID-DAEARKQQQDAIVCSLDNPDECEACGS 798
>gi|340375670|ref|XP_003386357.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Amphimedon queenslandica]
Length = 794
Score = 1147 bits (2967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/810 (65%), Positives = 649/810 (80%), Gaps = 20/810 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGR+E V FDKIT+R+ KL Y L+ + +PV + KV GVY GVTT++LD LA
Sbjct: 5 MYVIKRDGREEGVMFDKITSRITKLCYNLNNDFVEPVTITMKVINGVYAGVTTSELDTLA 64
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT HPDYA+LA R+AVSNLHK TK FS ++D+Y+Y N ++G+ +++ +
Sbjct: 65 AETAASMTTKHPDYAILAARIAVSNLHKETKKCFSAVMQDLYDYVNPKNGRHCPMISAET 124
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+II NA L+ AI+Y+RD+D+ YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIH
Sbjct: 125 NKIIQDNADKLNSAILYNRDYDYSYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHG 184
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
++ D A++TY+LMS+ WFTHA+PTLFN+GT +PQLSSCFLL M DDSIEGIYDTLK+CA
Sbjct: 185 NNLDKAIETYNLMSERWFTHASPTLFNSGTCRPQLSSCFLLTMADDSIEGIYDTLKRCAN 244
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IR+SGSYI GTNG+SNG+VPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 245 ISKSAGGIGLAVHKIRSSGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIY 304
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADI FLDLRKN GKEE RARDLFYALW PDLFM RV DG WSL CP + GL
Sbjct: 305 IEPWHADIIGFLDLRKNHGKEEQRARDLFYALWTPDLFMRRVESDGMWSLMCPDECPGLY 364
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
++WG EF+ LY +YE EGRA+ VI A+KLWF IL SQIETGTPYML+KD+CNRKSNQ+NL
Sbjct: 365 ETWGDEFDQLYEKYEAEGRARTVIRAQKLWFAILESQIETGTPYMLYKDACNRKSNQKNL 424
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLCTEIVE++SP+E AVCNLASIALPR+V E F
Sbjct: 425 GTIQCSNLCTEIVEYTSPDEVAVCNLASIALPRFVSEGQ--------------------F 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF+RL EVTK+IT NLN+IID+N+YP+ R SNLRHRPIGIG+QGLADTFIL+ F+
Sbjct: 465 DFQRLFEVTKVITRNLNRIIDINYYPVPEARTSNLRHRPIGIGVQGLADTFILMRYSFDC 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ+LN+ IFETIYY AL AS ELA ++G YETY GSP+S+GILQ DMW++TPSD WDW
Sbjct: 525 EEAQELNRMIFETIYYAALTASCELAGEEGVYETYHGSPVSQGILQYDMWDVTPSDLWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+E I+K G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 585 KALKEQIAKYGIRNSLLVAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGEFQIVNSHL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
++DL+E GLW+ +K ++I +NGSV I EIP+ELK +YKTVWEI QKTL++MAADRG Y
Sbjct: 645 MRDLSERGLWNDDMKQRLIKDNGSVQNIPEIPDELKVLYKTVWEISQKTLINMAADRGAY 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQS NIHM + + GK+TS+HFY W KG+KTGMYYLRTRAAA AI+FTVD +V+ +
Sbjct: 705 IDQSQSFNIHMGETNFGKMTSMHFYGWKKGLKTGMYYLRTRAAAQAIQFTVDQTVIKSAS 764
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ E ++CSLKN+E C++C +
Sbjct: 765 TKSDEMKKEEQEEAMICSLKNKEACISCSA 794
>gi|167524415|ref|XP_001746543.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774813|gb|EDQ88439.1| predicted protein [Monosiga brevicollis MX1]
Length = 784
Score = 1147 bits (2967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/810 (65%), Positives = 656/810 (80%), Gaps = 26/810 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR EPV FDKIT R++KLS+GL++++ +PV + +KV AGVY GV TTQLD+LA
Sbjct: 1 MYVVKRDGRHEPVLFDKITNRVEKLSFGLNRDYVEPVEITKKVMAGVYSGVHTTQLDQLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+ T HPDYA+LA R++VSNLHK T SFS+T+K ++ Y N ++GK A LV+D+
Sbjct: 61 AETAASFTTRHPDYAILAARISVSNLHKQTNKSFSQTMKALHEYVNPKTGKLAPLVSDET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ +I KN LD +IYDRDF+F++FGFKTLERSYLLK++ +VVERPQHM MRVSVGIH
Sbjct: 121 WAVIEKNKELLDSHVIYDRDFNFNFFGFKTLERSYLLKINGQVVERPQHMFMRVSVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ D+ L+TY+ MSQ FTHA+PTLFN+GTP QLSSCFL+ MKDDSI+GIYDTL CA+
Sbjct: 181 DNLDAVLETYNHMSQGLFTHASPTLFNSGTPLAQLSSCFLVSMKDDSIKGIYDTLTTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+GLSIHN+RASGSYI GTNG SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGVGLSIHNVRASGSYIAGTNGESNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDL+KN G +E RARDLFYALWVPDLFM+RV + +W+L CP + GLA
Sbjct: 301 LEPWHADVFEFLDLKKNHGSDELRARDLFYALWVPDLFMKRVERNEQWTLMCPHECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EGR + I A+KLWF IL SQ ETGTPYML+KD+CN KSNQ+NL
Sbjct: 361 DCYGAEFEALYERYEREGRGRKTIDAQKLWFAILESQTETGTPYMLYKDACNEKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLCTEIVE+S+P+E AVCNLAS+ALP++V E R +
Sbjct: 421 GTIRCSNLCTEIVEYSAPDEVAVCNLASLALPKFVNE------------------DTRTY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFERL +V KI+T NLN+IID+N+YP+ + SN+RHRPIGIG+QGLAD FIL+ LPF+S
Sbjct: 463 DFERLHDVVKIVTRNLNRIIDINYYPVPEAKNSNMRHRPIGIGVQGLADAFILMRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+ LNK IFETIY+ AL+AS E+A +DGPY+TY GSP+S+G LQ DMW ITP+D+WDW
Sbjct: 523 PEARDLNKRIFETIYHAALEASCEIAQRDGPYKTYEGSPVSQGTLQYDMWGITPTDQWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+ I+++GVRNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSG+F VVNKHL
Sbjct: 583 AALKAKIAEHGVRNSLLVAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQVVNKHL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ELG+WS+ +K +II NGS+ I+ IP+++KA+YKTVWE+ Q+TL+D+AADRG +
Sbjct: 643 LKDLVELGIWSNDIKQQIILNNGSIQAIAGIPDDIKALYKTVWELSQRTLIDLAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQS N+HM +P+ GKLTS+HFYAW +G+KTGMYYLRTRAAA AIKFT+D
Sbjct: 703 IDQSQSFNVHMGEPNFGKLTSMHFYAWKQGLKTGMYYLRTRAAASAIKFTID-------- 754
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
A +A E A +VCSL N E C+ C +
Sbjct: 755 ATKAKEQQEKEEAAMVCSLTNPEGCLMCSA 784
>gi|409097320|ref|ZP_11217344.1| ribonucleoside-diphosphate reductase subunit alpha [Pedobacter agri
PB92]
Length = 794
Score = 1147 bits (2966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/819 (66%), Positives = 660/819 (80%), Gaps = 38/819 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGRKEPV+FDKITAR++KL Y L+ + DP+ VA+KV G+Y GVTT++LD LA
Sbjct: 1 MFVLKRDGRKEPVQFDKITARIQKLCYSLNSDLVDPIDVAKKVIEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++T HPDYALLA R+AVSNLHK T SFS T+K +Y Y++ ++ K A L+ADDV
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTTKSFSGTMKMLYEYFDPKAQKPAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEII KNA LD +IIYDRDF FDYFGFKTLE+SYLLK++ +VERPQH+ MRVSVGIHK
Sbjct: 121 YEIIAKNADILDSSIIYDRDFGFDYFGFKTLEKSYLLKVNGAIVERPQHLFMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +SA+KTY+LMS+ WFTHATPTLFNA TP+PQ+SSCFLL M+DDSIEGIYDTLK+ A
Sbjct: 181 EDIESAIKTYNLMSERWFTHATPTLFNAATPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA+GSYI GTNG+SNGI+PML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIGGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLFYALW+ DLFM+RV+D+G W+LFCP +A GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEMRARDLFYALWINDLFMQRVKDNGDWTLFCPHEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE EGR + I A++LWF IL+SQIETGTPYMLFKD+ N KSNQQNL
Sbjct: 361 DCFGKEFEDLYTKYEAEGRGRKTIKAQELWFAILDSQIETGTPYMLFKDAANSKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++S +E AVCNLAS+ALPR+V N F
Sbjct: 421 GTIKSSNLCTEIIEYTSKDEVAVCNLASLALPRFV--------------------INGQF 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L +VT T NLNKIID N+YP++ SN+RHRP+G+G+QGLAD FILL LPFES
Sbjct: 461 DHQKLYDVTYQATLNLNKIIDHNYYPVQEAENSNMRHRPVGLGVQGLADAFILLRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA++LNKDIFETIY+ ++ AS +LAVK+GPY+T+ GSP+SKG Q D+WN+TP S RWD
Sbjct: 521 DEAKRLNKDIFETIYFASMTASNDLAVKNGPYQTFEGSPLSKGQFQFDLWNVTPDSGRWD 580
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W +LR+ + K+GV NSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEF+VVNKH
Sbjct: 581 WEALRKKVVKDGVYNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 640
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDL LGLW++ +K +II NGS+ I IP+ +K +YKTVWEIK + ++DMAADRG
Sbjct: 641 LLKDLVALGLWNNDMKNQIILANGSIQAIPSIPDYIKELYKTVWEIKMRNIIDMAADRGA 700
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YI QSQSLN+ + P+ KLTS+HFYAW KG+KTGMYYLRT+AA+ A+KFTV+ N+
Sbjct: 701 YICQSQSLNLFVNAPNTSKLTSMHFYAWEKGLKTGMYYLRTQAASQAVKFTVE-----NQ 755
Query: 780 KANRADNDVEANLAQ----------VVCSLKNQEECMAC 808
+ + A + Q VCS+ +E C++C
Sbjct: 756 GGKAIEAVIPAQMTQDQVAEEIVDGPVCSM--EEGCISC 792
>gi|327403796|ref|YP_004344634.1| ribonucleoside-diphosphate reductase subunit alpha [Fluviicola
taffensis DSM 16823]
gi|327319304|gb|AEA43796.1| ribonucleoside-diphosphate reductase, alpha subunit [Fluviicola
taffensis DSM 16823]
Length = 789
Score = 1147 bits (2966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/808 (65%), Positives = 648/808 (80%), Gaps = 21/808 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGRKE V+FDKITAR+ K+ YGL P VA KV G+Y GVTTT LD LA
Sbjct: 1 MYVLKRDGRKEAVKFDKITARIIKMCYGLDP-LVSPEAVAMKVIEGIYDGVTTTVLDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AAA T++HPDYALLA R+AVSNLHK TK SFSE ++D+Y Y + ++G++ASL+ADDV
Sbjct: 60 AEVAAAKTIDHPDYALLASRIAVSNLHKETKKSFSEVMEDLYKYVDPKTGQRASLIADDV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+I N+ LD +IIYDRDF +DYFGFKTL RSYLL+ + ERPQ MLMRV+VGIHK
Sbjct: 120 YEVIQNNSELLDSSIIYDRDFRYDYFGFKTLTRSYLLRTKGEIAERPQQMLMRVAVGIHK 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D A+KTY+LMS+ WFTHATPTLFNAGTP+PQ+SSCFLL MKDDSIEGIY+TLK CA
Sbjct: 180 NDLPQAIKTYNLMSEGWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIEGIYETLKSCAQ 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGL+IHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLAIHNIRATGSYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHAD+F+FLDL+KN GKEE RARDLF+ALW+PDLFM+RV ++G W+L CP + GL+
Sbjct: 300 IEPWHADVFDFLDLKKNTGKEEMRARDLFFALWIPDLFMKRVEENGDWTLMCPHECPGLS 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G EFE LY+QYE EG+ + I A+ LWF++L SQIETGTPYML+KD+ N KSNQQNL
Sbjct: 360 DTFGAEFEALYTQYETEGKGRKTIKAQDLWFKVLESQIETGTPYMLYKDAANAKSNQQNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLCTEI+E+++P+E AVCNLAS+ALP+YV E G F
Sbjct: 420 GVIKSSNLCTEIIEYTAPDEIAVCNLASLALPKYVTEDGK-------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L EVT T NLN+IID N YP+E R+SN+RHRPIG+G+QGLADTFI+L PFES
Sbjct: 461 DHDKLFEVTYQATVNLNRIIDGNFYPVEEARKSNMRHRPIGLGVQGLADTFIMLRYPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN++IFETIYY A+ AS +LA+ +GPYETY GSP+SKG+ Q DMW +TP+ RW+W
Sbjct: 521 EEARALNREIFETIYYAAMTASKDLAMAEGPYETYAGSPVSKGVFQYDMWGVTPTSRWEW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E ++K GVRNSLLVAPMPTAST+QILGNNECFEPYTSNIYTRRVLSGEFI+VNKHL
Sbjct: 581 DLLKEEVAKYGVRNSLLVAPMPTASTAQILGNNECFEPYTSNIYTRRVLSGEFIIVNKHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL + GLW+ ++ K++ NGSV I+EIP+ +K +YKT WEI QK +++ AADRG Y
Sbjct: 641 LKDLVKEGLWTKDMRQKLMAANGSVQNINEIPQYIKDLYKTAWEISQKAIIEQAADRGAY 700
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
I QSQSLNI ME + GKLTS+HFY W KG+KTGMYYLRT+AA DAIKFTVD +V E
Sbjct: 701 ICQSQSLNIFMENANFGKLTSMHFYGWKKGLKTGMYYLRTKAATDAIKFTVDKAV-TEEP 759
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMAC 808
A + ++E A + CSL N + C C
Sbjct: 760 AAISAAELEEQQAAIACSLDNPDNCEMC 787
>gi|124003381|ref|ZP_01688231.1| ribonucleoside-diphosphate reductase, alpha subunit [Microscilla
marina ATCC 23134]
gi|123991479|gb|EAY30910.1| ribonucleoside-diphosphate reductase, alpha subunit [Microscilla
marina ATCC 23134]
Length = 808
Score = 1146 bits (2964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/773 (68%), Positives = 640/773 (82%), Gaps = 21/773 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDGR+E VRFDKITAR++KLSY L++++ PV VA+KV G+Y GVTT +LD LA
Sbjct: 1 MQVIKRDGRRESVRFDKITARIEKLSYSLARDYVQPVEVAKKVITGIYDGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA M + HPDYA+LA R+A+SNLHK T FS+T+K++Y Y + ++G+KA L++D+
Sbjct: 61 AETAATMAIKHPDYAILAARIAISNLHKTTSKVFSKTMKELYEYIDPKTGEKAGLISDET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ I KNAA LD +IIYDRD+++DYFGFKTLERSYLLKMD +VVERPQHMLMRV+VGIH
Sbjct: 121 HAAIQKNAAVLDSSIIYDRDYNYDYFGFKTLERSYLLKMDGQVVERPQHMLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D L+TY L+S WFTHATPTLFNAGTP+PQLSSCFLL M+DDSIEGIYDTLK+CA
Sbjct: 181 EDVDKVLETYELLSGKWFTHATPTLFNAGTPKPQLSSCFLLTMQDDSIEGIYDTLKQCAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNG++PML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISQSAGGIGLSIHNVRATGSYIKGTNGTSNGVIPMLKVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDL+KN GKEE RARDLFYA+W+ DLFM+RV +D WSLFCP++A GL
Sbjct: 301 LEPWHADIFEFLDLKKNHGKEELRARDLFYAMWLSDLFMKRVENDDTWSLFCPNEAPGLH 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ +G EFE LY QYE EGRA+ VI A+ LWF+IL SQIETGTPYML+KD+ N KSNQ+NL
Sbjct: 361 EVYGEEFEKLYEQYELEGRARKVIKAQDLWFKILESQIETGTPYMLYKDAANEKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++S +E AVCNLASIALP++V D K F
Sbjct: 421 GTIKSSNLCTEIMEYTSKDEVAVCNLASIALPKFV-----------------IDGK---F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L EVT+++T NLN+IID+N+YP++ SNLRHRPIGIG+QGLADTF++L +PF+S
Sbjct: 461 DHQKLYEVTQVVTRNLNRIIDINYYPVKEAENSNLRHRPIGIGVQGLADTFMMLRMPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA+ LNKDIFETIY+ ++ AS ELA K+G YE+Y GSP+S+GI Q DMW + P S RWD
Sbjct: 521 EEAKGLNKDIFETIYFASMTASMELAQKEGAYESYKGSPVSEGIFQFDMWGVKPESGRWD 580
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W +LR+ + K+G RNSLL+APMPTASTSQILGNNECFEPYTSNIYTRRVLSGEF+VVNKH
Sbjct: 581 WQALRKDVKKHGARNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 640
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL DL EL LW ++ +I NGSV I EIP+ LK IYKTVWEIKQK +VDMAADRG
Sbjct: 641 LLNDLVELNLWGGDMENRIKAANGSVQNIPEIPQNLKDIYKTVWEIKQKDVVDMAADRGA 700
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
+I QSQSLNIHME P GKLTS+HFYAW KG+KTG YYLRT+AAA AI+FTV+
Sbjct: 701 FICQSQSLNIHMENPTFGKLTSMHFYAWKKGLKTGTYYLRTKAAAKAIQFTVE 753
>gi|452823074|gb|EME30087.1| ribonucleoside-diphosphate reductase alpha chain [Galdieria
sulphuraria]
Length = 813
Score = 1146 bits (2964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/827 (65%), Positives = 662/827 (80%), Gaps = 33/827 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGRK+PV+FDKITAR+KKL+YGL D + VAQKVC GVY GV+T++LD+LA
Sbjct: 3 MHVVKRDGRKQPVKFDKITARIKKLAYGLDP-MVDIIEVAQKVCTGVYNGVSTSELDDLA 61
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA M+ H DY+LLA R+A+SNLHK T SFS+T+ +Y+Y + ++ A L+A+D+
Sbjct: 62 AETAAYMSTKHHDYSLLASRIAISNLHKNTLKSFSKTMDILYHYESPKTKAPAPLIAEDI 121
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ IIMKNA LD AIIYDRDF +DYFGFKTLERSYLL++D +V+ERPQHMLMRV+VGIHK
Sbjct: 122 HSIIMKNAHVLDDAIIYDRDFSYDYFGFKTLERSYLLRVDGKVIERPQHMLMRVAVGIHK 181
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD ++ L+TY MS+ +FTHA+PTLFNAGTP+PQLSSCFLL M +DSIEGIYDTLK+CA+
Sbjct: 182 DDLEAVLETYDYMSRKYFTHASPTLFNAGTPRPQLSSCFLLTMTEDSIEGIYDTLKRCAV 241
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H+IRA+ SYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 242 ISKSAGGIGLAVHDIRATKSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 301
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFY LWVPDLFM+RV D KWSLFCP++A GLA
Sbjct: 302 LEPWHADIFEFLDLRKNHGKEENRARDLFYGLWVPDLFMKRVEKDEKWSLFCPNEAPGLA 361
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG FE LY +YE+E RA+ VI ARKLWF IL +QIETG PYML+KD CNRKSNQQNL
Sbjct: 362 DCWGEAFEQLYEKYEKEKRARQVIDARKLWFAILEAQIETGNPYMLYKDHCNRKSNQQNL 421
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLCTEIV+++SP+E AVCNLASIAL ++V+ S DS+ +
Sbjct: 422 GTIRCSNLCTEIVQYTSPDEVAVCNLASIALNQFVQ--------------FSEDSEEPYY 467
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L VTKI+T NLNKIID+N+YP+ + SNLRHRPIGIG+QGLAD FIL+ LPFES
Sbjct: 468 DFEQLEHVTKIVTRNLNKIIDINYYPVTQAKTSNLRHRPIGIGVQGLADAFILMRLPFES 527
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN I ETIYY A+ S ELA +DG YE++ GSP+S+G+ Q D+W + PS R+DW
Sbjct: 528 DEARRLNIQIAETIYYAAMCTSLELAQRDGAYESFRGSPLSRGLFQFDLWQVKPSARYDW 587
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L E I ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYTRRVL+GEF +VN+HL
Sbjct: 588 KTLGEAIQRDGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFTIVNQHL 647
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
++DL LGLW++ +K KII NGSV I EIP++++ +YKT+WE QK L+DMAADRG +
Sbjct: 648 VRDLQRLGLWNNDMKNKIIAYNGSVQHIPEIPQDIRQLYKTIWECSQKRLLDMAADRGAF 707
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLN+++ P+ GKL+S+HF+ W KG+KTGMYYLRTR AA+AIKFTVD L ++
Sbjct: 708 IDQSQSLNVYIASPNIGKLSSMHFHGWKKGLKTGMYYLRTRPAAEAIKFTVDQQYL-SQA 766
Query: 781 ANRA-----------------DNDVEANLAQVVCSLKNQEECMACGS 810
N++ V N + CSL+N E C++CGS
Sbjct: 767 VNKSMLLNNNNNNGGEENVSIIRKVPTNEDYLSCSLQNPEGCLSCGS 813
>gi|440751432|ref|ZP_20930665.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Mariniradius saccharolyticus AK6]
gi|436480074|gb|ELP36339.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Mariniradius saccharolyticus AK6]
Length = 801
Score = 1145 bits (2963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/816 (66%), Positives = 656/816 (80%), Gaps = 21/816 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDGR+E VRFDKIT R++ L YGL + P+ VA+KV G+Y GVTT++LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITTRIENLCYGLDSRYIHPIEVAKKVIDGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE A++TV HPDYA+LA R+A+SNLHK T SFS T+K MY Y N ++G+ A+L+A DV
Sbjct: 61 AEVCASLTVKHPDYAVLAARIAISNLHKTTSQSFSNTMKRMYTYINPKTGENAALIAPDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y ++ +AA LD AI Y RDFD+DYFGFKTLE+SYL+K+D +VVERPQHMLMRV+VGIHK
Sbjct: 121 YGVVKNHAAKLDEAIDYTRDFDYDYFGFKTLEKSYLIKLDGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D DSA++TYHL+SQ WFTHATPTLFNAGTP+ QLSSCFLL MKDDSI+GIYDTLK+CA
Sbjct: 181 EDIDSAIETYHLLSQKWFTHATPTLFNAGTPKAQLSSCFLLTMKDDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA GSYI GTNG SNGIVPML+ F+ TARYVDQGGGKRKG+FAIY
Sbjct: 241 ISQSAGGIGLSIHNIRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+ +FL+L++N GKEE RARDLFYA+W+PDLFM+RV + +WSLFCP++A GLA
Sbjct: 301 LEPWHADVKDFLELKRNHGKEEMRARDLFYAMWIPDLFMKRVEQNDEWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D G EFE LY +YE+EGRA+ V+ A++LWFEIL SQIETGTPYML+KDS N+KSNQQNL
Sbjct: 361 DCHGEEFERLYEKYEKEGRAREVVKAQELWFEILESQIETGTPYMLYKDSANKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+++P+E AVCNLASIALP++V E D K F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASIALPKFVTE--------------GPDGK-LFF 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D +L E+TK+ T NLNK+ID+N+YP+E RRSN RHRPIG+G+QGLAD FI+L +PF+S
Sbjct: 466 DHNKLYEITKVATRNLNKVIDINYYPVEEARRSNFRHRPIGLGVQGLADAFIMLRMPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA+ LN+DIFETIYY A++ S ELA G YET+ GSP SKGILQ DMW +TP S RW+
Sbjct: 526 AEAKGLNEDIFETIYYAAVETSMELAKTQGSYETFEGSPASKGILQFDMWGVTPKSGRWN 585
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L+ + ++G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRR LSGEFIVVNKH
Sbjct: 586 WDELKVNVIQHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
L+KDL +LGLW+ +K ++I NGSV I IP+ +K IYKTVWE+ Q+ ++DMAADRG
Sbjct: 646 LMKDLIKLGLWNDTMKNRLIAANGSVQNIPGIPQNIKDIYKTVWELSQRVIIDMAADRGA 705
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YI QSQS+N+ M+ P+ GKLTS+HFYAW KG+KTGMYYLR++AAA AI+FTVD S L +
Sbjct: 706 YICQSQSMNVFMQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAAAAAIQFTVDKSALEPD 765
Query: 780 K---ANRADNDVEANLAQ--VVCSLKNQEECMACGS 810
K A D+ + Q + CSL N E+C CGS
Sbjct: 766 KTIVAQTPTMDLTKSQKQGAIACSLDNPEDCEMCGS 801
>gi|284041187|ref|YP_003391117.1| ribonucleoside-diphosphate reductase subunit alpha [Spirosoma
linguale DSM 74]
gi|283820480|gb|ADB42318.1| ribonucleoside-diphosphate reductase, alpha subunit [Spirosoma
linguale DSM 74]
Length = 826
Score = 1145 bits (2963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/841 (64%), Positives = 664/841 (78%), Gaps = 46/841 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGR+E V+FDKITAR++KL YGL + PV VA KV +G+Y GV TT+LD LA
Sbjct: 1 MFVVKRDGRRESVKFDKITARIEKLCYGLDPAYVQPVEVAVKVVSGLYDGVKTTELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT HPDYA+LA R+A+SNLHK T SFS TIK +Y Y + ++G+ ASL++ +V
Sbjct: 61 AETAASMTTKHPDYAILAARIAISNLHKETNKSFSGTIKKLYQYEDPKTGENASLISKEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+++ ++AA LD IIYDRD+ +DYFG+KTLE+SYLLK+D R+ ERPQHMLMRV+VGIH+
Sbjct: 121 YDVVRQHAALLDSTIIYDRDYGYDYFGYKTLEKSYLLKLDGRIAERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +SA++TY+L+S+ WFTHATPTLFNAGTP+PQ+SSCFLL MKDDSI+GIYDTLK+ A
Sbjct: 181 EDIESAIETYNLLSEKWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+G+YI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 241 ISQSAGGIGLSIHNVRATGTYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FLDL+KN GKEE RARDLFYALW PDLFM+RV DD WSLFCP + GLA
Sbjct: 301 LEPWHADIFDFLDLKKNSGKEEGRARDLFYALWTPDLFMKRVEDDDVWSLFCPHECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE EGRA+ I A++LWF+IL SQ ETGTPYML+KD+ N+KSNQ+NL
Sbjct: 361 DCYGDEFEELYTRYEREGRARRTIKAQELWFKILESQTETGTPYMLYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+++P+E AVCNLASIALP+++ D R F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEIAVCNLASIALPKFITR--------------GTDGIMR-F 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L EVTK T NLNKIID+N+YP+E RRSN+RHRPIG+G+QGLAD FI+L +PFES
Sbjct: 466 DHQKLYEVTKTATRNLNKIIDINYYPVEEARRSNMRHRPIGLGVQGLADAFIMLRMPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA++LN+DIFETIY+ A+ +S E A + GPYET+ GSP+S+GI Q DMW + P S+RWD
Sbjct: 526 EEARRLNEDIFETIYFGAMTSSMEQAKEFGPYETWKGSPISQGIFQFDMWGVKPKSNRWD 585
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W SLR+ + ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYTRRVLSGEF+VVNKH
Sbjct: 586 WESLRKDVVEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 645
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDL +LGLW+ A+K +I NGS+ I IP+ +K +YKTVWEIKQK ++DMAADRG
Sbjct: 646 LLKDLVKLGLWNDAMKNNLILANGSIQAIPNIPQNIKDLYKTVWEIKQKHIIDMAADRGA 705
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV-------- 771
YI QSQSLNIH++ + GKLTS+HFYAW G+KTGMYYLRT+AAADA+KFTV
Sbjct: 706 YICQSQSLNIHIQDSNFGKLTSMHFYAWKAGLKTGMYYLRTKAAADAVKFTVVQPQAEPQ 765
Query: 772 ---------------DTSVLNNEKANRAD-------NDVEANLAQVVCSLKNQEECMACG 809
D E A A D+E A + CSL + E C CG
Sbjct: 766 LEPVMAEAVTVEKPLDYVQYAKEHAQNATPQPVPMVTDLEQQYAAMTCSLDDPEGCEMCG 825
Query: 810 S 810
S
Sbjct: 826 S 826
>gi|408672794|ref|YP_006872542.1| ribonucleoside-diphosphate reductase, alpha subunit [Emticicia
oligotrophica DSM 17448]
gi|387854418|gb|AFK02515.1| ribonucleoside-diphosphate reductase, alpha subunit [Emticicia
oligotrophica DSM 17448]
Length = 823
Score = 1144 bits (2960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/839 (64%), Positives = 664/839 (79%), Gaps = 45/839 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V+FDKITAR+++L YGL PV VA KV AG+Y GV+T++LD LA
Sbjct: 1 MFVIKRDGRRESVKFDKITARIERLCYGLEPAFVQPVEVAMKVVAGIYDGVSTSELDSLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT HPDYA+LA R+A+SNLHK T SFS T+K +Y Y + ++G+ ASL+A D
Sbjct: 61 AETAASMTTKHPDYAILAARIAISNLHKNTLKSFSGTMKMLYQYIDPKTGQNASLIAKDT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++I K+AA LD AIIYDRDF +DYFG+KTLE+SYLLK++ ++VERPQHMLMRV+VGIH
Sbjct: 121 WKVIQKHAALLDSAIIYDRDFGYDYFGYKTLEKSYLLKVNGKIVERPQHMLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D L+TY L+S+ WFTHATPTLFNAGTP+PQLSSCFLL +K+DSI GIYDTL + A
Sbjct: 181 EDIDRVLETYELLSERWFTHATPTLFNAGTPKPQLSSCFLLTIKEDSITGIYDTLGQTAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGL+IHN+RA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 241 ISQSAGGIGLAIHNVRATGSYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIFEFLDLRKN GKEE RARDLFYALW+ DLFM+RV + WSLFCP++A GL+
Sbjct: 301 IEPWHADIFEFLDLRKNHGKEELRARDLFYALWISDLFMKRVEANDTWSLFCPNEAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EG+A+ I A+ LWF I+ SQIETGTPYML+KD+ N+KSNQ+NL
Sbjct: 361 DCYGEEFEKLYEKYELEGKARKTIKAQDLWFAIMESQIETGTPYMLYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRL- 479
GTIKSSNLCTEI+E+++P+E AVCNLASIALP+Y+ +D K
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASIALPKYI----------------VKDEKTGFM 464
Query: 480 -FDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
FD E+L EVTK+IT+NLNK+IDVN+YP+ RSNLRHRPIG+G+QGLADTFI L +PF
Sbjct: 465 KFDHEKLYEVTKVITKNLNKVIDVNYYPVIEAERSNLRHRPIGLGVQGLADTFITLRMPF 524
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDR 597
ES EA++LNK+IFETIY+ A+++S E+A+ DGPY T+ GSP+S+GI Q DMW ++P S R
Sbjct: 525 ESDEARRLNKEIFETIYFAAMESSMEMAMADGPYSTWEGSPISQGIFQFDMWGVSPDSGR 584
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
W+W LRE + +GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEF+VVN
Sbjct: 585 WNWEELREKVKTHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVN 644
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLLKDL ++GLW+ +K K+I NGSV I+EIP+ LK +Y+T WEIKQKT++DMAADR
Sbjct: 645 KHLLKDLVKIGLWNDTMKNKLIAANGSVQGIAEIPQNLKDLYRTAWEIKQKTIIDMAADR 704
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD----- 772
G +I QSQSLNI ME + GKLTS+HFYAW G+KTGMYYLRT+AA+DA+KFTVD
Sbjct: 705 GAFICQSQSLNIFMENANFGKLTSMHFYAWKAGLKTGMYYLRTKAASDAVKFTVDRQAIA 764
Query: 773 -----TSVLNNEKANRA----------------DNDVEANLAQVVCSLKNQEECMACGS 810
TS ++ + + ++ E A + CSL + E C CGS
Sbjct: 765 EVVPATSAVSEKPLDYVKYAEEQTAKATAAATFSSEAEYQYAAMQCSLDDPEGCEMCGS 823
>gi|110636873|ref|YP_677080.1| ribonucleoside diphosphate reductase subunit alpha [Cytophaga
hutchinsonii ATCC 33406]
gi|110279554|gb|ABG57740.1| ribonucleoside diphosphate reductase, alpha subunit [Cytophaga
hutchinsonii ATCC 33406]
Length = 794
Score = 1143 bits (2957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/812 (66%), Positives = 655/812 (80%), Gaps = 24/812 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+KRDGR+E V+FDKIT+R+++L YGL + DP VA++V G+Y GVTT +LD LA
Sbjct: 1 MLVLKRDGRRESVKFDKITSRIERLCYGLDMNYVDPTSVAKRVIDGLYDGVTTEELDHLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT HPDYA LA R+AVSNLHK T SF+ T+K +Y Y + ++G+ AS+++++V
Sbjct: 61 AETAASMTTKHPDYATLAARIAVSNLHKKTSKSFANTMKRLYTYVDPKTGENASMISNEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE I KNAA LD AIIYDRD+ +DYFGFKTLE+SYLLK+D ++VERPQHMLMRVS GIH
Sbjct: 121 YEFIRKNAAILDSAIIYDRDYGYDYFGFKTLEKSYLLKVDGKIVERPQHMLMRVSCGIHS 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A++TY+LMS+ WFTHATPTLFN+GTP+PQLSSCFLL +DDSI+GIY+TLK+CA
Sbjct: 181 GDIDAAIETYNLMSERWFTHATPTLFNSGTPKPQLSSCFLLTTQDDSIDGIYETLKQCAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA+GSYI GTNG+SNGI+PML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIKGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLFYA+W+ DLFM+RV ++G WSLFCP +A GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEMRARDLFYAMWISDLFMKRVEENGDWSLFCPHEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G +FE LY +YE+EGRA+ I A++LWF IL +Q+ETGTPYML+KD+ NRKSNQ+NL
Sbjct: 361 DCYGKDFEALYEKYEKEGRARKTIKAQELWFAILEAQVETGTPYMLYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+EF+SPEE AVCNLAS+ALP++V N F
Sbjct: 421 GTIKSSNLCTEIMEFTSPEEVAVCNLASLALPKFV--------------------INGKF 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L +VT + T+NLNKIIDVN+YP+ RSN RHRPIG+G+QGLAD FILL +PFES
Sbjct: 461 DHQKLYDVTYVATKNLNKIIDVNYYPVPEAERSNKRHRPIGLGVQGLADAFILLRMPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA+QLN DI ETIYY A+ AS +LA K GPYET+ GSP+SKGI Q DMW +TP S R+D
Sbjct: 521 DEAKQLNIDIHETIYYAAMTASKDLAEKLGPYETFKGSPVSKGIFQFDMWGVTPASGRYD 580
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W +L+ + K+GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEF+VVNKH
Sbjct: 581 WEALKREVKKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 640
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDL +L LW +K ++I NGSV I+ IP+ +K +YKT WEIK KTL+DM+ADRG
Sbjct: 641 LLKDLIKLNLWDDKMKNRLIEMNGSVQNINNIPQNIKDLYKTAWEIKGKTLIDMSADRGA 700
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV---L 776
YI QSQSLNI M + + GKLTS+HFYAW+KG+KTGMYYLRT++AA+AI+FTV+ L
Sbjct: 701 YICQSQSLNIFMPEANFGKLTSMHFYAWNKGLKTGMYYLRTKSAANAIQFTVEKQAEVQL 760
Query: 777 NNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
+++ D E + CSL N E C +C
Sbjct: 761 APGTTDQSIVDAEKKAKDMACSLDNPEGCESC 792
>gi|255530603|ref|YP_003090975.1| ribonucleoside-diphosphate reductase subunit alpha [Pedobacter
heparinus DSM 2366]
gi|255343587|gb|ACU02913.1| ribonucleoside-diphosphate reductase, alpha subunit [Pedobacter
heparinus DSM 2366]
Length = 792
Score = 1142 bits (2953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/812 (66%), Positives = 655/812 (80%), Gaps = 26/812 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGRKE VRFDKITAR++KL YG + E DP+ VA+KV G+Y GVTT++LD LA
Sbjct: 1 MFVIKRDGRKEAVRFDKITARIEKLCYGFNAELVDPIDVAKKVIEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++T HPDYALLA R+AVSNLHK T SFS+T++ +YNY + ++ K ASL+ADDV
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTTKSFSKTMEMLYNYVDSKTEKPASLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+E+I KNA LD IIYDRDF FDYFGFKTLE+SYLLK+D ++VERPQH+ MRV+VGIHK
Sbjct: 121 WEVIEKNADILDSTIIYDRDFGFDYFGFKTLEKSYLLKVDGQIVERPQHLFMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+LMS+ WFTHATPTLFNA TP+PQ+SSCFLL M+DDSIEGIYDTLK+ A
Sbjct: 181 GDIDSAIETYNLMSERWFTHATPTLFNAATPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIGGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+ FLDLRKN GKEE RARDLFYALWV DLFM RV ++G WSLFCP +A GLA
Sbjct: 301 LEPWHADVLSFLDLRKNHGKEELRARDLFYALWVCDLFMRRVEENGDWSLFCPHEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY +YE+EGRA+ I A++LWF IL+SQIETGTPY+L+KD+ N KSNQQNL
Sbjct: 361 DCFGEEFDALYERYEQEGRARKTIKAQELWFAILDSQIETGTPYLLYKDAANSKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++S +E AVCNLAS+ALPR+V N F
Sbjct: 421 GTIKSSNLCTEIIEYTSKDEVAVCNLASLALPRFV--------------------INGEF 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L +VT T NLNKIID N+YP+E R SN+RHRP+G+G+QGLAD FIL+ LPFES
Sbjct: 461 DHQKLYDVTYQATVNLNKIIDYNYYPVEEARNSNMRHRPVGLGVQGLADAFILMRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
A+ LNK+IFETIY+ A+ AS +LAVK+GPYET+ GSP+S+G Q D+W + P S RWD
Sbjct: 521 EGARILNKEIFETIYFAAMTASHDLAVKNGPYETFKGSPLSQGKFQFDLWKVQPDSGRWD 580
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W +LRE + K+GV NSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH
Sbjct: 581 WETLREKVVKDGVYNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 640
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDL LGLW+ A+K +II NGS+ I+EIP+ +K +YKTVWEIK ++++DMAADRG
Sbjct: 641 LLKDLVALGLWTPAMKDRIILANGSIQDIAEIPDYIKELYKTVWEIKMRSIIDMAADRGA 700
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YI QSQSLN+ + P+ KLTS+HFYAW KG+KTGMYYLRT+AA+ A+KFTV+ N
Sbjct: 701 YICQSQSLNLFINAPNTSKLTSMHFYAWKKGLKTGMYYLRTQAASQAVKFTVENQAGKNM 760
Query: 780 K---ANRADNDVEANLAQVVCSLKNQEECMAC 808
+ + E + VCS+ +E C++C
Sbjct: 761 EPVIPEHIEQSAEEIVEGPVCSM--EEGCISC 790
>gi|373954258|ref|ZP_09614218.1| ribonucleoside-diphosphate reductase, alpha subunit
[Mucilaginibacter paludis DSM 18603]
gi|373890858|gb|EHQ26755.1| ribonucleoside-diphosphate reductase, alpha subunit
[Mucilaginibacter paludis DSM 18603]
Length = 792
Score = 1141 bits (2952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/815 (66%), Positives = 663/815 (81%), Gaps = 28/815 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDG+KE V+FDKITAR++KL YGL+ DP+ V++KV G+Y GVTT++LD LA
Sbjct: 1 MFVIKRDGKKETVKFDKITARIEKLCYGLNPSLVDPIDVSKKVVEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++T HPDYALLA R+AVSNLHK T SFSET++++Y Y +K++GK ASL+ADDV
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTIKSFSETMRNLYLYTDKKTGKNASLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++ I NA LD IIYDRDF FDYFGFKTLE+SYLLK+D ++ ERPQH+ MRVSVGIHK
Sbjct: 121 WQAIEANAELLDSTIIYDRDFGFDYFGFKTLEKSYLLKIDGKIAERPQHLFMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D DS +KTY+LMS+ WFTHATPTLFNAGTP+PQ+SSCFLL M+DDSI+GIYDTLK+ A
Sbjct: 181 EDIDSVIKTYNLMSERWFTHATPTLFNAGTPKPQMSSCFLLTMQDDSIDGIYDTLKQTAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGI+PML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGIIPMLKVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFYALW+ DLFM+RV +DG+WSLFCP +A GL
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEMRARDLFYALWICDLFMQRVEEDGQWSLFCPHEAPGLH 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY++YE EGRA+ I A++LWF IL++Q+ETGTPY+L+KD+ N KSNQQNL
Sbjct: 361 ECWGKEFEALYTKYEAEGRARKTIRAQELWFAILDAQVETGTPYLLYKDAANSKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++S +E AVCNLAS+ALPRY+ GV F
Sbjct: 421 GTIKSSNLCTEIIEYTSADEVAVCNLASLALPRYIT-AGV-------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L EVT +T NLNKIID N+YP+ SN RHRPIG+G+QGLADTFI L LPFES
Sbjct: 461 DHQKLYEVTYQVTLNLNKIIDHNYYPVVEASNSNFRHRPIGLGVQGLADTFIRLRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA++LNK+IFETIY+ A+ AS +LA++DGPYET+ GSP+S+G Q D+WN+TP S RW+
Sbjct: 521 DEAKKLNKEIFETIYFAAMTASKDLAIQDGPYETFKGSPLSQGKFQFDLWNVTPDSGRWN 580
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W LR + +GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEF+VVNK+
Sbjct: 581 WEDLRSDVMNHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKY 640
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL DL ELGLW++ +K +II NGSV I EIP E+K +YKTVWEIK +T++DMAADRG
Sbjct: 641 LLHDLVELGLWNNDMKNQIISANGSVQDIPEIPAEIKELYKTVWEIKMRTIIDMAADRGA 700
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
Y+ QSQSLN+ + P+ KLTS+HFYAW KG+KTGMYYLRT+AA+ A+KFT+++ +
Sbjct: 701 YVCQSQSLNLFISSPNASKLTSMHFYAWKKGLKTGMYYLRTQAASQAVKFTIESQGGKSM 760
Query: 780 KANRADNDVEANLAQV----VCSLKNQEECMACGS 810
+ +N V A + ++ VCS+ +E C+ C +
Sbjct: 761 EPVIPENGV-AVVDEIPDGPVCSM--EEGCVTCSA 792
>gi|441498219|ref|ZP_20980419.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Fulvivirga imtechensis AK7]
gi|441438007|gb|ELR71351.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Fulvivirga imtechensis AK7]
Length = 781
Score = 1140 bits (2950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/809 (64%), Positives = 656/809 (81%), Gaps = 39/809 (4%)
Query: 13 VRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHP 72
++FDK+TAR++KL YGL + +PV +A+KV G+Y GVTT +LD LAAETAA++T HP
Sbjct: 1 MKFDKVTARIEKLCYGLDMNYIEPVDIAKKVINGIYDGVTTVELDNLAAETAASLTTKHP 60
Query: 73 DYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLD 132
D+ALLA R+A+SNLHK+T SFS T+K +Y Y + ++G+ A L++ + Y +I K+AA LD
Sbjct: 61 DFALLAARIAISNLHKVTSKSFSNTMKRLYTYVDPKTGENAPLISKEAYGVIKKHAALLD 120
Query: 133 GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHL 192
+IIYDRDF +DYFGFKTLERSYL++++ ++VERPQHMLMRV++GIH DD D+A++TY+L
Sbjct: 121 SSIIYDRDFSYDYFGFKTLERSYLMRVEGKIVERPQHMLMRVAIGIHMDDIDAAIETYNL 180
Query: 193 MSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSI 252
+S+ WFTHATPTLFNA TP+PQLSSCFLL M+DDSI+GIYDTLK+CA IS+SAGGIGLSI
Sbjct: 181 LSEKWFTHATPTLFNAATPKPQLSSCFLLTMQDDSIDGIYDTLKQCAKISQSAGGIGLSI 240
Query: 253 HNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFL 312
HN+RA+GSYI GT G SNGIVPML+ F+ TARYVDQGGGKRKG+FAIYLEPWHADIF+FL
Sbjct: 241 HNVRATGSYIKGTGGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIYLEPWHADIFDFL 300
Query: 313 DLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYS 372
DL+KN GKEE RARDLFYALW+PDLFM+RV D+ WSLFCP++A GLAD +G EFE LY+
Sbjct: 301 DLKKNHGKEELRARDLFYALWIPDLFMKRVEDNDVWSLFCPNEAPGLADCYGDEFEKLYT 360
Query: 373 QYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEI 432
+YE EG+ + + A+ LWFE+L +QIETGTPYML+KD+ N+KSNQ+NLGTIKSSNLCTEI
Sbjct: 361 KYEREGKYRKQVKAQDLWFEVLEAQIETGTPYMLYKDAANKKSNQKNLGTIKSSNLCTEI 420
Query: 433 VEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKII 492
VE+++P+E AVCNLASIALP++V E G FD ++L E+TK++
Sbjct: 421 VEYTAPDEVAVCNLASIALPKFVTEDG-------------------RFDHQKLYEITKVV 461
Query: 493 TENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFE 552
T+NLNK+ID+N+YP++ R SN+RHRPIGIG+QGLADTF++L +PF+SPEA+ LNK I E
Sbjct: 462 TKNLNKVIDINYYPVKEARNSNMRHRPIGIGVQGLADTFLMLKMPFDSPEARGLNKHIHE 521
Query: 553 TIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWDWSSLREMISKNG 611
TIY+ A+ AS E+A +GPYETY GSP+SKGI Q DMW +TP S RWDW SL++ + KNG
Sbjct: 522 TIYFAAMTASMEIATVEGPYETYKGSPVSKGIFQFDMWGVTPDSGRWDWESLKKEVRKNG 581
Query: 612 VRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWS 671
VRNSLL+APMPTASTSQILGNNECFEPYTSNIYTRR LSGEFIVVNKHL+KDL LGLW
Sbjct: 582 VRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKHLMKDLIALGLWD 641
Query: 672 HALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHM 731
++K ++I NGSV I EIP+ +K +YKTVWEI QK ++DMAADRG YI QSQS+N+H+
Sbjct: 642 DSMKNRLIEANGSVQNIPEIPQHIKDLYKTVWEISQKAIIDMAADRGAYICQSQSMNVHI 701
Query: 732 EQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS----------VLNNEKA 781
+ P+ GKLTS+HFYAW KG+KTGMYYLR++AAA AI+FTVD S + NE+
Sbjct: 702 QDPNFGKLTSMHFYAWKKGLKTGMYYLRSKAAASAIQFTVDKSAKQQPAAQQQAVTNEEQ 761
Query: 782 NRADNDVEANLAQVVCSLKNQEECMACGS 810
NRAD +VCSL N + C ACGS
Sbjct: 762 NRAD---------MVCSLDNPDACEACGS 781
>gi|149279600|ref|ZP_01885729.1| ribonucleoside diphosphate reductase, alpha subunit [Pedobacter sp.
BAL39]
gi|149229636|gb|EDM35026.1| ribonucleoside diphosphate reductase, alpha subunit [Pedobacter sp.
BAL39]
Length = 792
Score = 1140 bits (2949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/812 (66%), Positives = 656/812 (80%), Gaps = 26/812 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGRKE VRFDKITAR++KL YG + E DP+ VA+KV G+Y GVTT++LD LA
Sbjct: 1 MFVIKRDGRKEAVRFDKITARIEKLCYGFNAELVDPIDVAKKVIEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++T HPDYALLA R+AVSNLHK T SFS+T++ +Y Y + ++ K ASL+ADDV
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTTKSFSKTMEMLYKYVDSKTDKSASLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+E+I +NA LD IIYDRDF FDYFGFKTLE+SYLLK++ ++VERPQH+ MRV+VGIHK
Sbjct: 121 WEVIQENADILDSTIIYDRDFGFDYFGFKTLEKSYLLKIEGQIVERPQHLFMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA+KTY+LMS+ WFTHATPTLFNA TP+PQ+SSCFLL M+DDSIEGIYDTLK+ A
Sbjct: 181 SDIDSAIKTYNLMSERWFTHATPTLFNAATPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIGGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F FLDLRKN GKEE RARDLFYALWV DLFM+RV + WSLFCP +A GLA
Sbjct: 301 LEPWHADVFSFLDLRKNHGKEELRARDLFYALWVCDLFMKRVEANEDWSLFCPHEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EGRA+ + A++LWF IL+SQIETGTPY+L+KD+ N KSNQQNL
Sbjct: 361 DCFGDEFEALYERYEKEGRARKTVKAQELWFAILDSQIETGTPYLLYKDAANSKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++S +E AVCNLAS+ALPR+V N F
Sbjct: 421 GTIKSSNLCTEIIEYTSKDEVAVCNLASLALPRFV--------------------INGEF 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L +VT T NLNKIID N+YP+E + SN+RHRP+G+G+QGLAD FIL+ LPFES
Sbjct: 461 DHQKLYDVTYQATLNLNKIIDYNYYPVEEAKNSNMRHRPVGLGVQGLADAFILMRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
A+ LNK+IFETIY+ A+ AS +LAV +GPY+T+ GSP+S+G Q D+WN+TP S RWD
Sbjct: 521 DGARLLNKEIFETIYFAAMTASHDLAVVNGPYQTFKGSPLSQGKFQFDLWNVTPDSGRWD 580
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W SLRE + K+GV NSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH
Sbjct: 581 WESLREKVVKDGVYNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 640
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDL LGLW+ A+K +II NGS+ I+EIP+ +K +YKTVWEIK ++++DMAADRG
Sbjct: 641 LLKDLVALGLWTPAMKDRIILANGSIQDIAEIPDYIKELYKTVWEIKMRSIIDMAADRGA 700
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YI QSQSLN+ + P+ KLTS+HFYAW KG+KTGMYYLRT+AA+ A+KFTV+ N
Sbjct: 701 YICQSQSLNLFINAPNTSKLTSMHFYAWKKGLKTGMYYLRTQAASQAVKFTVENQAGKNM 760
Query: 780 K---ANRADNDVEANLAQVVCSLKNQEECMAC 808
+ + D VE VCS+ +E C++C
Sbjct: 761 EPVIPDHIDQPVEEITDGPVCSM--EEGCISC 790
>gi|449017740|dbj|BAM81142.1| ribonucleoside-diphosphate reductase alpha chain [Cyanidioschyzon
merolae strain 10D]
Length = 811
Score = 1140 bits (2949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/829 (65%), Positives = 667/829 (80%), Gaps = 43/829 (5%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVL----VAQKVCAGVYKGVTTTQLDE 58
V+KRDGR++PV+FDKITAR+KKL+YGL DP++ VAQKVCAGVY GV T++LDE
Sbjct: 5 VVKRDGRRQPVKFDKITARIKKLAYGL-----DPLVDVTEVAQKVCAGVYDGVHTSELDE 59
Query: 59 LAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
LAAETAA M+ H DY++LA R+AVSNLHK T+ SFS ++ +Y Y + ++ A L+A
Sbjct: 60 LAAETAAYMSTRHHDYSILAARIAVSNLHKNTEKSFSAVMERLYAYRSPKTNDPAPLIAS 119
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
DV EI+ ++A +DGAIIYDRDF +DYFGFKTLERSYLL++D +VVERPQ MLMRV++GI
Sbjct: 120 DVIEIVRRHAETIDGAIIYDRDFSYDYFGFKTLERSYLLRIDGKVVERPQQMLMRVAIGI 179
Query: 179 HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
HK+D D+AL+TY MSQ +FTHA+PTLFNAGTP+PQLSSCFLL M +DSIEGIYDTLK+C
Sbjct: 180 HKEDLDAALETYDYMSQKYFTHASPTLFNAGTPRPQLSSCFLLSMTEDSIEGIYDTLKRC 239
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A+ISKSAGGIGL+IHNIRA+ SYI GTNGSSNGIVPML+VFNDTARYVDQGGGKRKGAFA
Sbjct: 240 AVISKSAGGIGLAIHNIRATKSYIRGTNGSSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 299
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
+YLEPWHADIFE+LDL+KN GKEE RARDLFYALW PDLFM RV + +WSLFCP++A G
Sbjct: 300 VYLEPWHADIFEWLDLKKNHGKEEARARDLFYALWTPDLFMRRVEANEQWSLFCPNEAPG 359
Query: 359 LADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQ 418
LAD WG F+ LY +YE EGRA+ VI ARKLWF IL SQIETGTPYML+KD CNRKSNQQ
Sbjct: 360 LADVWGDAFDELYQRYEAEGRAREVIPARKLWFSILESQIETGTPYMLYKDHCNRKSNQQ 419
Query: 419 NLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYV----REKGV-PVQSNVSKLVGSR 473
NLGTI+ SNLCTEIVE+++P+E AVCNLASIAL ++V RE+G PV
Sbjct: 420 NLGTIRCSNLCTEIVEYTAPDEVAVCNLASIALNKFVVPGDRERGTCPV----------- 468
Query: 474 DSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFIL 533
F+F+ LA VT+++T+NLNKIIDVN YPI + SNLRHRPIGIG+QGLAD FIL
Sbjct: 469 ------FNFDELAFVTRMVTKNLNKIIDVNFYPIPEAQNSNLRHRPIGIGVQGLADAFIL 522
Query: 534 LGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNIT 593
+ +PFES EA+ LN++IFE IYY+AL+AS ELA +DGPY ++ GSP ++G LQ D+WN+
Sbjct: 523 MRMPFESDEARALNQEIFECIYYNALQASIELAERDGPYASFEGSPAARGQLQFDLWNVK 582
Query: 594 P-SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
P S RWDW +L+E I+ +G+RNSLLVAPMPTASTSQILGNNECFEPYTSN+YTRRVL+GE
Sbjct: 583 PTSSRWDWDALKERITLHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNLYTRRVLAGE 642
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F VVN+HL++DL ELGLW+ +K KII GS+ +I EIP++++ +YKTVWE+ Q+ L+D
Sbjct: 643 FTVVNQHLVRDLQELGLWNPLVKNKIIAHGGSIQQIPEIPQDIRDLYKTVWEVSQRRLLD 702
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
+AADRG +IDQSQSLN+++ QP GKL+S+HF+ W G+KTGMYYLRTR AADAIKFT+D
Sbjct: 703 LAADRGAFIDQSQSLNVYIAQPTIGKLSSMHFHGWRLGLKTGMYYLRTRPAADAIKFTLD 762
Query: 773 TSVLNNEKANRAD-NDVEANL----------AQVVCSLKNQEECMACGS 810
+L E + + + NL A + CSL +++C+ACGS
Sbjct: 763 QRILKEENHTAVNGSQLPCNLTPRTSAAEQFAALACSLDKKDDCIACGS 811
>gi|312130871|ref|YP_003998211.1| ribonucleoside-diphosphate reductase subunit alpha [Leadbetterella
byssophila DSM 17132]
gi|311907417|gb|ADQ17858.1| ribonucleoside-diphosphate reductase, alpha subunit [Leadbetterella
byssophila DSM 17132]
Length = 820
Score = 1140 bits (2949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/836 (63%), Positives = 665/836 (79%), Gaps = 42/836 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGR+E V+FDKITAR+++L YGL PV VA KV AG+Y GVTT++LD LA
Sbjct: 1 MFVVKRDGRRESVKFDKITARIERLCYGLDPYFVQPVEVAMKVVAGIYDGVTTSELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT HPDYA+LA RVA+SNLHK T SFS T+K +Y Y + ++G+ A+L++ +
Sbjct: 61 AETAASMTTKHPDYAILAARVAISNLHKNTLKSFSGTMKLLYQYVDPKTGENAALISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++II NAA LD +IIYDRDF +D+FG+KTLE+SYL+K++ ++VERPQHMLMRV+VGIH
Sbjct: 121 WKIIQANAALLDSSIIYDRDFGYDFFGYKTLEKSYLMKLNGKIVERPQHMLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
++ + A++TY+L+S+ WFTHATPTLFNAGTP+PQLSSCFLL MKDDSIEGIYDTLK+ A
Sbjct: 181 ENIEKAIETYNLLSERWFTHATPTLFNAGTPKPQLSSCFLLTMKDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGI+PML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 241 ISQSAGGIGLSIHNVRATGSYIKGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFL+L+KN GKEE RARDLFYALW PDLFM+RV + WSLFCP + GLA
Sbjct: 301 LEPWHADIFEFLNLKKNHGKEEERARDLFYALWTPDLFMKRVEANADWSLFCPHECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G +FE LY++YE EG+A+ I A++LWF+IL SQ+ETGTPYML+KD+ N+KSNQ+NL
Sbjct: 361 DTYGEDFERLYTKYEAEGKARKTIPAQELWFQILESQVETGTPYMLYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+++P+E AVCNLASIALP++V +G P S F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASIALPKFVNTEG-PAPS---------------F 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTK++T NLN+IID+N+YP+ SN RHRPIG+GIQGLAD FIL+ PF+S
Sbjct: 465 DFQKLYEVTKVVTRNLNRIIDINYYPVPEAENSNKRHRPIGLGIQGLADAFILMRFPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EAQ+LN+D+FET+Y+ A++ S ELA ++GPY ++ GSP+SKGI Q DMW++TP S WD
Sbjct: 525 EEAQKLNRDVFETLYFAAMETSMELAKEEGPYSSFEGSPISKGIFQFDMWDVTPDSGLWD 584
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W LR+ + ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKH
Sbjct: 585 WEDLRKKVMEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 644
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL+DL ++GLW+ +K K+I NGSV +I EIPE+LKA+YKT WEIKQK+++DM+ADRG
Sbjct: 645 LLRDLVKIGLWNDTMKNKLIAANGSVQQIPEIPEDLKALYKTAWEIKQKSIIDMSADRGA 704
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD------- 772
YI QSQSLNI M P+ KLTS+HFYAW G+KTGMYYLRT+AAADA+KFTVD
Sbjct: 705 YICQSQSLNIFMTDPNFAKLTSMHFYAWKAGLKTGMYYLRTKAAADAVKFTVDRQAIAET 764
Query: 773 TSVLNNEKANRAD------------------NDVEANLAQVVCSLKNQEECMACGS 810
+ V + D + E A + CSL N E C CGS
Sbjct: 765 SPVTETIQEKPLDYKGYAKEQAEKAAASFQMTEEEQKYAAMQCSLDNPEGCEMCGS 820
>gi|255037023|ref|YP_003087644.1| ribonucleoside-diphosphate reductase subunit alpha [Dyadobacter
fermentans DSM 18053]
gi|254949779|gb|ACT94479.1| ribonucleoside-diphosphate reductase, alpha subunit [Dyadobacter
fermentans DSM 18053]
Length = 814
Score = 1140 bits (2948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/829 (63%), Positives = 660/829 (79%), Gaps = 34/829 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGR+E V+FDK+TAR++KLSYGL + PV VA+KV +G+Y GVTT +LD LA
Sbjct: 1 MYVIKRDGRRESVKFDKVTARIEKLSYGLDATYVQPVEVAKKVVSGIYDGVTTAELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT HPDYA+LA RVA+SNLHK T SFS T+K +Y Y + ++G+ ASL++ +V
Sbjct: 61 AETAASMTTKHPDYAILAARVAISNLHKNTLKSFSATMKRLYTYIDSKTGENASLISREV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+I +NA+ LD IIYDRD+ +DYFG+KTLE+SYLLK++ ++VERPQHMLMRV++GIH+
Sbjct: 121 YEVIRQNASLLDSTIIYDRDYSYDYFGYKTLEKSYLLKVEGKIVERPQHMLMRVAIGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +A++TYHL+S+ WFTHATPTLFNAGTP+PQ+SSCFLL MK+DSI GIYDTLK CA+
Sbjct: 181 EDVQAAIETYHLLSEKWFTHATPTLFNAGTPKPQMSSCFLLTMKEDSINGIYDTLKNCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIH++RA+G+YI GTNG SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 241 ISQSAGGIGLSIHDVRATGTYIKGTNGQSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+DIF+FLDL+KN GKEE RARDLFYALW+PDLFM+RV + WSLFCP + GLA
Sbjct: 301 IEPWHSDIFDFLDLKKNHGKEEQRARDLFYALWIPDLFMKRVEANDTWSLFCPHECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D+ EFE LY QYE EGRA+ I A+ LWF I+ SQIETGTPYML+KD N KSNQQNL
Sbjct: 361 DTHSEEFEKLYEQYEREGRARKTIKAQDLWFAIMESQIETGTPYMLYKDHANSKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+++P+E AVCNLASIALP++V + F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASIALPKFVEQGADGFMH---------------F 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L E+TK++T NLNKIID+N YP+ +SN RHRPIGIG+QGLAD F ++ +PF+S
Sbjct: 466 DHQKLYEITKVVTRNLNKIIDLNFYPVPEAEKSNKRHRPIGIGVQGLADAFCMMRMPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA++LNKDIFETIYY +++AS ELA+++GPYET+ GSP+S+G+ Q DMWN+TP S RW+
Sbjct: 526 DEARRLNKDIFETIYYGSMEASMELAMQNGPYETWAGSPISQGVFQFDMWNVTPESKRWN 585
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W LR+ + +NGVRNSLL+APMPTASTSQILGNNECFEP+TSNIY RRVLSGEF+VVNK+
Sbjct: 586 WEKLRKEVVQNGVRNSLLLAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFVVVNKY 645
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDL LGLWS +K ++ +GSV I IP+ +K +YKT WEIKQ++L+DM+ADRG
Sbjct: 646 LLKDLVRLGLWSEEMKNNLVRASGSVQAIPNIPQNIKDLYKTAWEIKQRSLLDMSADRGA 705
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD------- 772
YI QSQSLNI ME+ + GKLTS+HFYAW KG+KTGMYYLRTRAA+D ++FTV
Sbjct: 706 YICQSQSLNIFMEEANFGKLTSMHFYAWKKGLKTGMYYLRTRAASDPVQFTVSKQAEPQL 765
Query: 773 ---TSVLNNEKANRADNDVEA--------NLAQVVCSLKNQEECMACGS 810
T+V+ ++ N E N + + CSL + E C ACGS
Sbjct: 766 EPATAVVAEKELNYVQYAEEHAKPAAPRDNRSDMQCSLDDPEGCEACGS 814
>gi|189501949|ref|YP_001957666.1| hypothetical protein Aasi_0536 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497390|gb|ACE05937.1| hypothetical protein Aasi_0536 [Candidatus Amoebophilus asiaticus
5a2]
Length = 790
Score = 1140 bits (2948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/817 (64%), Positives = 656/817 (80%), Gaps = 34/817 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+KRDGR E V+FDKITAR++KL GL+ ++ +PV +A KV AG+Y VTT +LD LA
Sbjct: 1 MLVVKRDGRYESVKFDKITARIEKLCTGLNTDYINPVDIAMKVIAGIYDKVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA+M HPDY +LA R+AVSNLHK+T SFS T+K +Y Y + ++G+ ASL+A DV
Sbjct: 61 AEIAASMATKHPDYTVLAARIAVSNLHKVTSESFSNTMKWLYTYIDPKTGENASLIASDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I ++AA LD I+Y RD+D+DYFGFKTLERSYLLK++ ++VERPQHMLMRV+VGIHK
Sbjct: 121 YKVIREHAALLDKTIVYKRDYDYDYFGFKTLERSYLLKINGKIVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A++TYHL+S+ WFTHATPTLFNAGTP+PQLSSCFLL MK+DSIEGIYDTLK+CA
Sbjct: 181 EDIEAAIQTYHLLSERWFTHATPTLFNAGTPKPQLSSCFLLTMKEDSIEGIYDTLKQCAQ 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA+GSYI GTNG SNGIVPML+ F+ TARYVDQGGG+RKG+FAIY
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIKGTNGISNGIVPMLRNFDMTARYVDQGGGRRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIFEFLDLRKN GKEE RARDLFYALW+PDLFM+RV ++ +WSLFCP+++ GLA
Sbjct: 301 LEPWHSDIFEFLDLRKNHGKEELRARDLFYALWIPDLFMQRVENNEEWSLFCPNESPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EG+A+ + A++LWF IL +QIETG P+ML+KDS NRKSNQQNL
Sbjct: 361 DCYGEEFERLYKKYEREGKARKSVKAQELWFAILEAQIETGMPFMLYKDSANRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+EF+SPEE AVCNLASIALP+++ + G F
Sbjct: 421 GTIKSSNLCTEIIEFTSPEEVAVCNLASIALPKFINQAGK-------------------F 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L E+T +IT+NLNKIID+NHYP+ R SN RHRPIGIG+QGLADTF+ L +PF+S
Sbjct: 462 DHQKLYEITYVITKNLNKIIDINHYPVPEARTSNFRHRPIGIGVQGLADTFLRLRMPFDS 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD-RWD 599
PEA+ LNKDIFETIY+ A+ AS +LA + GPYET+ GSP+SKGI Q DMW + PS RWD
Sbjct: 522 PEARGLNKDIFETIYFAAMTASKDLAKQYGPYETFKGSPISKGIFQFDMWGVEPSSGRWD 581
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W +LR+ + +GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH
Sbjct: 582 WETLRKEVQLHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 641
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL DL LGLW +K ++I NGSV +I IP+ +K +++TVWEI QK ++DMAADRG
Sbjct: 642 LLTDLINLGLWDENMKNELIAANGSVQRIDRIPQHIKELHRTVWEIPQKAIIDMAADRGA 701
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
+I QSQS+NIH+ + KLTS+HFYAW KG+KTG+YYLRTR AADAIKFT+
Sbjct: 702 FICQSQSMNIHLLDANFAKLTSMHFYAWKKGLKTGLYYLRTRPAADAIKFTL-------- 753
Query: 780 KANRADNDVEANLAQV------VCSLKNQEECMACGS 810
+ +A ND+ +V VC ++ E+C+ CGS
Sbjct: 754 QKEQALNDIPVPQKKVEQQVSMVCDAEDSEDCLVCGS 790
>gi|406663813|ref|ZP_11071832.1| Ribonucleoside-diphosphate reductase 1 subunit alpha [Cecembia
lonarensis LW9]
gi|405551927|gb|EKB47524.1| Ribonucleoside-diphosphate reductase 1 subunit alpha [Cecembia
lonarensis LW9]
Length = 797
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/812 (65%), Positives = 649/812 (79%), Gaps = 17/812 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDGR+E VRFDKIT R++ L GL + P+ VA+KV G+Y GVTTT+LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITTRIENLCNGLDGRYIHPIEVAKKVIDGLYDGVTTTELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE A++TV HPDYA+LA R+A+SNLHK T SFS T+K +Y + N+++G A+L+A DV
Sbjct: 61 AEVCASLTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTHINQKTGDNAALIAPDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y ++ K+AA LD I Y RDFD+DYFGFKTLERSYL+K+D +VVERPQHMLMRV+VGIHK
Sbjct: 121 YGVVKKHAAKLDEVIDYQRDFDYDYFGFKTLERSYLIKLDGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TYHL+SQ WFTHATPTLFNAGTP+PQLSSCFLL MK+DSI+GIYDTLK+CA
Sbjct: 181 EDIDAAIETYHLLSQKWFTHATPTLFNAGTPKPQLSSCFLLTMKEDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIH++RA GSYI GTNG SNGIVPML+ F+ TARYVDQGGGKRKG+FAIY
Sbjct: 241 ISQSAGGIGLSIHHVRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+ +FL+L++N GKEE RARDLFYA+W+PDLFM+RV + +WSLFCP++A GLA
Sbjct: 301 LEPWHADVKDFLELKRNHGKEEMRARDLFYAMWIPDLFMKRVEQNDEWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D G EFE LY +YE EG+A+ I A++LWFEIL SQIETGTPYML+KDS N+KSNQQNL
Sbjct: 361 DCHGEEFEKLYEKYEREGKARETIKAQELWFEILESQIETGTPYMLYKDSANKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP+E AVCNLASIALP++V +D K + F
Sbjct: 421 GTIKSSNLCTEIIEYTSPDEVAVCNLASIALPKFV--------------ATGKDGK-KYF 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L EVTK+ T NLNK+IDVN+YP+E RRSN RHRPIG+G+QGLAD FI+L +PF+S
Sbjct: 466 DHQKLYEVTKVATRNLNKVIDVNYYPVEEARRSNFRHRPIGLGVQGLADAFIMLRMPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA+ LN+DIFETIYY +++ S ELA G YETY GSP SKGI Q DMW +TP S RW
Sbjct: 526 DEAKGLNEDIFETIYYASMETSMELAKVQGTYETYEGSPASKGIFQFDMWGVTPKSGRWA 585
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W+ L+E + K G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRR LSGEFIVVNKH
Sbjct: 586 WNELKEKVKKFGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
L++DL LGLW+ K ++I NGSV I IP+ +K IYKTVWEI Q+ ++DMA +RG
Sbjct: 646 LMRDLINLGLWNDTTKNRLIAANGSVQNIPGIPQNIKDIYKTVWEISQRIIIDMATERGA 705
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YI QSQS+N+ M+ P+ GKLTS+HFYAW KG+KTGMYYLR++AAA AI+FTVD S L +
Sbjct: 706 YICQSQSMNVFMQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAAASAIQFTVDKSALETD 765
Query: 780 K-ANRADNDVEANLAQVVCSLKNQEECMACGS 810
K A+ D + CSL + E C CGS
Sbjct: 766 KTASAVDPSRNQKQDAIACSLDDPEGCEMCGS 797
>gi|313675914|ref|YP_004053910.1| ribonucleoside-diphosphate reductase subunit alpha [Marivirga
tractuosa DSM 4126]
gi|312942612|gb|ADR21802.1| ribonucleoside-diphosphate reductase, alpha subunit [Marivirga
tractuosa DSM 4126]
Length = 826
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/841 (62%), Positives = 668/841 (79%), Gaps = 46/841 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+KRDGR+E V+FDKITAR++KL YGL + P+ VA+KV G+Y GVTT +LD LA
Sbjct: 1 MLVVKRDGRRETVKFDKITARIEKLCYGLDLNYIQPIDVARKVINGIYDGVTTQELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MTV HPDY+ L+ R+A+SNLHK T SFS T+K +Y Y + ++G+ A L++ +
Sbjct: 61 AETAASMTVKHPDYSKLSARIAISNLHKTTSKSFSNTMKRLYTYVDAKTGQNAPLLSTET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y II K+AA LD AIIYDRDF +D+FGFKTLERSYL+K+D ++VERPQHMLMRV++GIH
Sbjct: 121 YGIIKKHAAQLDSAIIYDRDFGYDFFGFKTLERSYLMKVDGKIVERPQHMLMRVAIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +SA+KTY+LMS+ WFTHATPTLFNAGTP+PQLSSCFLL +++DSI+GIYDTLK+ A
Sbjct: 181 EDIESAIKTYNLMSEKWFTHATPTLFNAGTPKPQLSSCFLLTIQEDSIDGIYDTLKQTAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GT G SNGIVPML+ F+ TARYVDQGGGKRKG+FAIY
Sbjct: 241 ISQSAGGIGLSIHNVRATGSYIKGTGGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FLDL+KN GKEE RARDLFYA+W+ DLFM+RV + +W+LF P++ASGL
Sbjct: 301 LEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWMSDLFMKRVEANAEWTLFDPNEASGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+++G +FE LY +YE EG+ + + A++LWFEIL SQIETGTPYML+KD+ N+KSNQ+NL
Sbjct: 361 EAYGDDFEKLYEKYEREGKGRKTVKAQELWFEILESQIETGTPYMLYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++S +E AVCNLASIALP +V+E ++ + F
Sbjct: 421 GTIKSSNLCTEILEYTSKDEVAVCNLASIALPMFVQED---------------ENGQKFF 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L ++T T NLN++IDVN+YP+E R SN+RHRPIG+G+QGLAD F+LL PF+S
Sbjct: 466 DHDKLYDITYTATVNLNRVIDVNYYPVEEARTSNMRHRPIGLGVQGLADAFMLLRYPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
E+++LNK+IFETIY+ A+ AS +LAVK+GPYETY GSP+SKGI Q DMWN+ P+DRWDW
Sbjct: 526 EESRKLNKEIFETIYFAAMTASKDLAVKEGPYETYKGSPVSKGIFQFDMWNVEPTDRWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L++ + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRR LSGEF+VVNKHL
Sbjct: 586 TTLKQEVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFVVVNKHL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
++DL E G+W+ +K K+I NGSV I++IP+++K +YKTVWEI QK ++DMAADRG Y
Sbjct: 646 MRDLIERGMWNDNMKNKLIAANGSVQDIADIPQDIKELYKTVWEISQKAIIDMAADRGAY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN--- 777
I QSQS+N+ M+ P+ GK+TS+HFYAW KG+KTGMYYLR++AA AI+FTVD S LN
Sbjct: 706 ICQSQSMNLFMQDPNFGKMTSMHFYAWKKGLKTGMYYLRSKAATSAIQFTVDKSQLNEPQ 765
Query: 778 ------------NEKANRADNDV-------EAN---------LAQVVCSLKNQEECMACG 809
+ K NR N V +AN AQV CSL N ++C CG
Sbjct: 766 PEQKPQDITQSTDTKVNRPQNSVGTQGQGPQANAEDDLAALKAAQVACSLDNPDDCEMCG 825
Query: 810 S 810
S
Sbjct: 826 S 826
>gi|326797772|ref|YP_004315591.1| ribonucleoside-diphosphate reductase subunit alpha
[Sphingobacterium sp. 21]
gi|326548536|gb|ADZ76921.1| ribonucleoside-diphosphate reductase, alpha subunit
[Sphingobacterium sp. 21]
Length = 792
Score = 1136 bits (2938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/817 (65%), Positives = 654/817 (80%), Gaps = 32/817 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGR E V+FDKITAR++KL YGL+ + DP+ VA+KV G+Y GVTT++LD LA
Sbjct: 1 MYVIKRDGRSESVKFDKITARIEKLCYGLNPDLVDPIDVARKVIEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++T HPDYALLA R+AVSNLHK T SFSET+ +Y+Y + ++GK A L+ADDV
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTVKSFSETMSLLYHYIDPKTGKPAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+I NA LD IIYDRDF FDYFGFKTLE+SYLLK++ ++ ERPQH+ MRV+VGIHK
Sbjct: 121 YEVIQANAMELDSHIIYDRDFSFDYFGFKTLEKSYLLKLNGKIAERPQHLFMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +S +KTY L+S+ WFTHATPTLFNAGTP+PQ+SSCFLL MKDDSIEGIYDTLK+ A
Sbjct: 181 HDIESVIKTYDLLSERWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+G+YI GTNG+SNGI+PML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISQSAGGIGLSIHNVRATGAYISGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+++F+DLRKN GKEE RARDLF ALWVPDLFM+RV ++G+WSLF P +A GLA
Sbjct: 301 LEPWHADVYDFIDLRKNHGKEELRARDLFLALWVPDLFMKRVEENGEWSLFSPDEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ G FE LY QYE EGRA+ ++ A+ LWF IL++QIETGTPY+L+KD+ N KSNQQNL
Sbjct: 361 ECHGEAFEKLYEQYEREGRARKIVKAQDLWFAILDAQIETGTPYLLYKDAANGKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++S +E AVCNLAS+ALPRYV N F
Sbjct: 421 GTIKSSNLCTEIIEYTSADEVAVCNLASLALPRYV--------------------DNGEF 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L ++T +T NLN+IID N+YP++ R SNLRHRP+G+G+QGLADTFIL+ +PFES
Sbjct: 461 DHQKLFDITYQVTINLNRIIDNNYYPVDEARNSNLRHRPVGLGVQGLADTFILMRMPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
A+QLNKDIFETIY+ A+ AS +LAVK+GPYE++ GSP+S+G Q D+WN+ P S RWD
Sbjct: 521 EAAKQLNKDIFETIYFAAMTASKDLAVKEGPYESFKGSPLSQGKFQFDLWNVKPDSGRWD 580
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W LR+ I K+GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEF++VNKH
Sbjct: 581 WEGLRKEIKKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVIVNKH 640
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL+DL ELGLW++ +K +II NGS+ I+EIP ++K +YKTVWEIK + ++DMAADRG
Sbjct: 641 LLRDLVELGLWNNEMKNRIIAANGSIQDINEIPADIKELYKTVWEIKMRNIIDMAADRGA 700
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN- 778
+I QSQSLN+ + P KLTS+HFYAW KG+KTGMYYLRT+AA A+KFTV+ N
Sbjct: 701 FICQSQSLNLFVNTPTTAKLTSMHFYAWKKGLKTGMYYLRTQAATQAVKFTVENQAGKNM 760
Query: 779 -----EKANRADNDVEANLAQVVCSLKNQEECMACGS 810
K +D+ VCS+ +E C+ CGS
Sbjct: 761 EPVIPAKIESVPDDIPTG---AVCSM--EEGCITCGS 792
>gi|404450557|ref|ZP_11015538.1| ribonucleoside-diphosphate reductase subunit alpha [Indibacter
alkaliphilus LW1]
gi|403763777|gb|EJZ24720.1| ribonucleoside-diphosphate reductase subunit alpha [Indibacter
alkaliphilus LW1]
Length = 800
Score = 1135 bits (2937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/815 (65%), Positives = 650/815 (79%), Gaps = 20/815 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDGR+E VRFDKIT+R++ L Y L + P+ VA+KV G+Y GVTT++LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITSRIENLCYNLDGRYIQPIEVAKKVIDGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE A++TV HPDYA+LA R+A+SNLHK T SFS T+K +Y Y N ++G+ A+L+A DV
Sbjct: 61 AEVCASLTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTYINPKTGENAALIAPDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+ K+AA D AI Y RDFD+DYFGFKTLE+SYL+K+D +VVERPQHMLMRV+VGIHK
Sbjct: 121 YGIVKKHAARFDEAIDYTRDFDYDYFGFKTLEKSYLIKLDGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A++TY+L+S+ WFTHATPTLFNAGTP+PQLSSCFLL MKDDSI+GIYDTLK+CA
Sbjct: 181 EDIEAAIETYNLLSEKWFTHATPTLFNAGTPKPQLSSCFLLAMKDDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA GSYI GTNG SNGIVPML+ F+ TARYVDQGGGKRKG+FAIY
Sbjct: 241 ISQSAGGIGLSIHNVRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI +FL+L++N GKEE RARDLFYA+W+PDLFM+RV + WSLFCP++A GL
Sbjct: 301 LEPWHADIKDFLELKRNHGKEEMRARDLFYAMWIPDLFMKRVEQNEDWSLFCPNEAPGLG 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D EFE LY +YE EGRA+ I A++LWFEIL SQIETGTPYML+KDS N+KSNQQNL
Sbjct: 361 DCHSEEFEKLYEKYEREGRARETIKAQELWFEILESQIETGTPYMLYKDSANKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+++P+E AVCNLASIALP++V+ D K + F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASIALPKFVKT--------------GPDGK-KFF 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L E+TK+ T NLNK+IDVN+YP+E RRSN RHRPIG+G+QGLADTFI L +PFES
Sbjct: 466 DHKKLYEITKVATRNLNKVIDVNYYPVEEARRSNFRHRPIGLGVQGLADTFISLRMPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA+ LN+DIFETIY+ +++ S ELA G YETY GSP SKG LQ DMW +TP S RW+
Sbjct: 526 EEAKGLNEDIFETIYFASVETSMELAKVQGTYETYEGSPASKGQLQFDMWGVTPKSGRWE 585
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L+ + K G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRR LSGEFIVVNKH
Sbjct: 586 WDGLKAQVKKYGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
L+KDL LGLW+ +K ++I NGSV I IP+ +K IYKTVWEI Q+ ++DMAADRG
Sbjct: 646 LMKDLIRLGLWNDNMKNRLIAANGSVQAIPNIPQNIKDIYKTVWEISQRVVIDMAADRGA 705
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YI QSQS+N+ M+ P+ GKLTS+HFYAW KG+KTGMYYLR++AA AI+FTVD S L +
Sbjct: 706 YICQSQSMNVFMQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAATSAIQFTVDKSALEAD 765
Query: 780 KANRADNDVEANLAQ----VVCSLKNQEECMACGS 810
K A E+N +Q + CSL + E C CGS
Sbjct: 766 KITDAAAAHESNKSQKQDAIACSLDDPEGCEMCGS 800
>gi|395330811|gb|EJF63193.1| ribonucleotide reductase alpha subunit [Dichomitus squalens
LYAD-421 SS1]
Length = 894
Score = 1134 bits (2933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/777 (67%), Positives = 634/777 (81%), Gaps = 20/777 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV KR RKE V+FDKITAR+ KL YGL K+H DP+ VAQKV AGVY GVTT +LD LAA
Sbjct: 3 YVFKRGRRKERVQFDKITARIAKLCYGLDKDHVDPIGVAQKVIAGVYAGVTTVELDNLAA 62
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA +T HPDYA+LA R+AVSNLHK TK +FS I D+Y+Y N ++GK A L++ ++Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAVSNLHKETKKNFSAVISDLYHYVNPKNGKPAGLISKEIY 122
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
E++ NA LD AIIYDRDF++++FGFKTLERSYLLK++ RV ERPQH+LMRV+VGIH
Sbjct: 123 EVVQANAEVLDSAIIYDRDFNYNFFGFKTLERSYLLKLNGRVAERPQHLLMRVAVGIHGA 182
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D + AL+TY+LMS+ +FTHA+PTLFNAGTP PQ+SSCFL+CMKDDSIEGIY TLK CA+I
Sbjct: 183 DIERALQTYNLMSERYFTHASPTLFNAGTPNPQMSSCFLVCMKDDSIEGIYSTLKDCAMI 242
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK+AGGIGL+IHNIRA+GSYI GTNG SNGIVPML+V++ TARYVDQGG KR GAFAIYL
Sbjct: 243 SKTAGGIGLNIHNIRATGSYIAGTNGYSNGIVPMLRVYDATARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+FEFLDLRKN GKEE RARDLFYALW PDLFM+RV GKWSLFCPS+A GL +
Sbjct: 303 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVESGGKWSLFCPSEAPGLHE 362
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EFE LY QYE EGRA+ I A+KLW+ IL SQIETG P+ML+KD+ NRKSNQQNLG
Sbjct: 363 VWGEEFEALYEQYEREGRARKTIDAQKLWYAILESQIETGGPFMLYKDAANRKSNQQNLG 422
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+E+S+P+ETAVCNLASIALP ++ +N ++
Sbjct: 423 TIKSSNLCTEIIEYSAPDETAVCNLASIALPSFI--------------------ENGKYN 462
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L +V K++ NLN+IIDVN+YPI RRSN+RHRPIGIG+QGLAD F+ L +PF+S
Sbjct: 463 FQKLHDVAKVVAFNLNRIIDVNYYPIPEARRSNMRHRPIGIGVQGLADAFMALRMPFDSV 522
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA+ LN I ETIY+ A++AS E+A KDGPYETY GSP S+G LQ D+W +TP+D WDW+
Sbjct: 523 EARLLNLQIAETIYHAAVEASCEMAQKDGPYETYQGSPASQGKLQYDLWGVTPTDLWDWA 582
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
SL+ ++++G+RNSLL+APMPTASTSQILGNNECFEPYTSNIYTRRVL+GEF VV LL
Sbjct: 583 SLKAKVAQHGLRNSLLIAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
++L ELGLW+ +K II NGSV I IPE++KAIYKTVWEI QK ++D+AADRG +I
Sbjct: 643 RELVELGLWNDDMKNMIIANNGSVQNIDIIPEDVKAIYKTVWEISQKKVLDLAADRGAFI 702
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN 778
QSQSLN+H++ P +G+LTS+HFY W KG+KTGMYYLRTR AA AIKFTVD+S L N
Sbjct: 703 CQSQSLNVHLQSPTNGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIKFTVDSSYLKN 759
>gi|375148686|ref|YP_005011127.1| ribonucleoside-diphosphate reductase subunit alpha [Niastella
koreensis GR20-10]
gi|361062732|gb|AEW01724.1| ribonucleoside-diphosphate reductase, alpha subunit [Niastella
koreensis GR20-10]
Length = 789
Score = 1134 bits (2932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/815 (65%), Positives = 657/815 (80%), Gaps = 31/815 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+KR+G+KE V+FDKITAR++KLSYGLS D + V +KV G+Y GVTT++LD LA
Sbjct: 1 MNVLKRNGKKETVKFDKITARIQKLSYGLSP-LVDVIEVTKKVIEGIYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++T HPDYALLA R+AVSNLHK T+ SFS T+K +Y+Y + +G+K L+ADDV
Sbjct: 60 AETAASLTTKHPDYALLASRIAVSNLHKNTEKSFSGTMKRLYDYTDSATGRKMPLLADDV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
EII NA LD +IIYDRDF FDYFGFKTLE+SYLL++D +VERPQHM MRVS+GIHK
Sbjct: 120 MEIIEANAELLDSSIIYDRDFGFDYFGFKTLEKSYLLRIDGAIVERPQHMYMRVSIGIHK 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +SA+KTY+LMS+ WFTHATPTLFN GTP+PQ+SSCFLL MKDDSI+GIYDTLK+ A
Sbjct: 180 EDIESAIKTYNLMSERWFTHATPTLFNGGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGI+PML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIGGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI EFLDLRKN GKEE RARDLFYALW+ DLFM+RV +G WSLFCP++A GL
Sbjct: 300 LEPWHADIVEFLDLRKNHGKEEMRARDLFYALWINDLFMKRVESNGDWSLFCPNEAPGLG 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G EFE LY++YE EGR + VI A+ LWF IL +QIETGTPYML+KD+ NRKSNQQNL
Sbjct: 360 DTFGEEFEALYNRYEAEGRQRKVIKAQDLWFAILEAQIETGTPYMLYKDAANRKSNQQNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++S +E AVCNLAS+ALPR+V E F
Sbjct: 420 GTIKSSNLCTEILEYTSADEVAVCNLASLALPRFVNEGK--------------------F 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT NLNKIID N+YPIE +RSNLRHRPIG+G+QGLAD FILL LPFES
Sbjct: 460 DFDKLFEVTYQAARNLNKIIDNNYYPIEEAKRSNLRHRPIGLGVQGLADVFILLRLPFES 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A+ LNK+IFETIY+ A+ AS ++A++ G YET+ GSP+SKG Q D+WN+ PS+R+DW
Sbjct: 520 DLAKMLNKNIFETIYFAAMTASKDMAIEQGAYETFAGSPLSKGQFQFDLWNVEPSNRYDW 579
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++LR + K+GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEFI+VNKHL
Sbjct: 580 NALRAEVMKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFIIVNKHL 639
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLW+ ++K KII NGS+ I+EIP E+KA+YKTVWEIKQ+ L+DMAADRG +
Sbjct: 640 LKDLVQLGLWNDSMKNKIIAANGSIQNINEIPAEIKALYKTVWEIKQRHLIDMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN-- 778
I QSQSLN+ ++ P KLTS+HFY+W G+KTGMYYLRT+AA+ A++FTV+
Sbjct: 700 ICQSQSLNLFVDNPTVAKLTSMHFYSWKVGLKTGMYYLRTQAASQAVQFTVEKQGSRQME 759
Query: 779 ---EKANRADNDVEANLAQVVCSLKNQEECMACGS 810
K+ +++++ + VC++ +E C+ C S
Sbjct: 760 PVVPKSGESNDEI---IEGQVCTM--EEGCVTCSS 789
>gi|196012349|ref|XP_002116037.1| hypothetical protein TRIADDRAFT_50804 [Trichoplax adhaerens]
gi|190581360|gb|EDV21437.1| hypothetical protein TRIADDRAFT_50804 [Trichoplax adhaerens]
Length = 780
Score = 1133 bits (2931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/808 (64%), Positives = 650/808 (80%), Gaps = 30/808 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGRKE V FDKIT+R+ KL Y L+ +H DP + KV AG+Y GVTT +LD LA
Sbjct: 1 MYVVKRDGRKEKVMFDKITSRVSKLCYNLNNDHVDPAAITMKVIAGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA+MT NHPDYALLA R+AVSNLHK TK +FS + ++YNY N ++GK + +++ +
Sbjct: 61 AEIAASMTTNHPDYALLAARIAVSNLHKETKKTFSVVMDELYNYVNPKNGKHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+EII K+ L+ AIIYDRD+++++FGFKTLERSYLLK+D +V ERPQHMLMRVSVGIH
Sbjct: 121 HEIITKHCERLNSAIIYDRDYNYNFFGFKTLERSYLLKIDKKVAERPQHMLMRVSVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D A++TY+LMS+ WFTHA+PTLFNAGT +PQLSSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 EDIDGAIETYNLMSERWFTHASPTLFNAGTCRPQLSSCFLLTMSDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLS+H IR+SGSYI GTNG SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGLSVHCIRSSGSYIAGTNGHSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIF+FLDL+KN GKEE RARDLFYA+W+PDLFM+RV ++G WSL CP+D GL
Sbjct: 301 LEPWHPDIFDFLDLKKNTGKEEQRARDLFYAMWMPDLFMKRVEENGVWSLMCPNDCPGLH 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G EFE LY++YE+ G+ + A+KLWF IL +Q+ETGTPYML+KD+CNRKSNQ+NL
Sbjct: 361 DTYGEEFEKLYTEYEDAGKFIRQVRAQKLWFAILEAQVETGTPYMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP+E AVCNLASIALPR+VR ++ F
Sbjct: 421 GTIKSSNLCTEIIEYTSPDEVAVCNLASIALPRFVR-------------------PDKTF 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +LAEVTK+IT NLNKIID+N YP+ +SN RHRPIGIG+QGLAD FIL+ PF+
Sbjct: 462 DFHKLAEVTKVITRNLNKIIDINFYPVPEAEKSNKRHRPIGIGVQGLADAFILMRFPFDG 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+ LN IFE+IYY AL+AS ELA + GPYETY GSP S+G LQ D+W P+D W+W
Sbjct: 522 PEARDLNIKIFESIYYGALQASCELAKEVGPYETYEGSPASQGQLQFDLWEKQPTDLWNW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+SL+E I K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN+HL
Sbjct: 582 NSLKEDIKKYGLRNSLLLAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGEFQVVNQHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLT++G+W+ +K ++I NGS+ KI+ IP+++KA+YKTVWEI Q+TL+DMAADRG Y
Sbjct: 642 LKDLTDMGVWNDMMKNELIANNGSIQKINNIPDDIKALYKTVWEISQRTLIDMAADRGAY 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQS N+H+ +P+ KLTS+HFYAW KG+KTGMYYLRT+ AA AI+FTVD L ++
Sbjct: 702 IDQSQSFNVHIAEPNFAKLTSMHFYAWKKGLKTGMYYLRTKPAASAIQFTVDKEKLQKDR 761
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMAC 808
+ +VCSL+N+E C+ C
Sbjct: 762 E-----------SAMVCSLENKEACLMC 778
>gi|410027778|ref|ZP_11277614.1| ribonucleoside-diphosphate reductase subunit alpha [Marinilabilia
sp. AK2]
Length = 799
Score = 1132 bits (2927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/814 (64%), Positives = 648/814 (79%), Gaps = 19/814 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDGR+E VRFDKIT R++ L GL + P+ VA+KV G+Y GVTTT+LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITTRIENLCNGLDGRYIHPIEVAKKVIDGLYDGVTTTELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE A++TV HPDYA+LA R+A+SNLHK T SFS T+K +Y + N ++G A+L+A DV
Sbjct: 61 AEVCASLTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTHINPKTGDNAALIAPDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y ++ ++AA LD I Y RDFD+DYFGFKTLERSYL+K+D +VVERPQHMLMRV++GIHK
Sbjct: 121 YGVVKQHAAKLDEVIDYQRDFDYDYFGFKTLERSYLIKLDGKVVERPQHMLMRVAIGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TYHL+SQ WFTHATPTLFNAGTP+PQLSSCFLL MK+DSI+GIYDTLK+CA
Sbjct: 181 EDIDAAIETYHLLSQKWFTHATPTLFNAGTPKPQLSSCFLLTMKEDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIH++RA GSYI GTNG SNGIVPML+ F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHHVRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+ +FL+L++N GKEE RARDLFYA+W+PDLFM+RV + +WSLFCP++A GLA
Sbjct: 301 LEPWHADVKDFLELKRNHGKEEMRARDLFYAMWIPDLFMKRVEQNDEWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D G EFE LY +YE EG+A+ I A++LWFEIL SQIETGTPYML+KD+ N+KSNQQNL
Sbjct: 361 DCHGEEFEKLYEKYEREGKARETIKAQELWFEILESQIETGTPYMLYKDAANKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP+E AVCNLASIALP++V +D K + F
Sbjct: 421 GTIKSSNLCTEIIEYTSPDEVAVCNLASIALPKFV--------------ATGKDGK-KYF 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L EVTK+ T NLNK+IDVN+YP+E RRSN RHRPIG+G+QGLAD FI+L +PF+S
Sbjct: 466 DHQKLYEVTKVATRNLNKVIDVNYYPVEEARRSNFRHRPIGLGVQGLADAFIMLRMPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA+ LN+DIFETIY+ +++ S ELA G YETY GSP SKG Q D+W +TP S RW
Sbjct: 526 DEAKGLNEDIFETIYFASMETSMELAKIQGTYETYEGSPASKGQFQFDLWGVTPKSGRWA 585
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W+ L+E + K G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRR LSGEFIVVNKH
Sbjct: 586 WNELKEKVKKYGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
L++DL LGLW+ +K ++I NGSV I IP+ +K IYKTVWEI Q+ ++DMAADRG
Sbjct: 646 LMRDLINLGLWNDNMKNRLIAANGSVQNIPGIPQNIKDIYKTVWEISQRIIIDMAADRGA 705
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YI QSQS+N+ M+ P+ GKLTS+HFYAW KG+KTGMYYLR++AAA AI+FTVD S L +
Sbjct: 706 YICQSQSMNVFMQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAAASAIQFTVDKSALETD 765
Query: 780 K---ANRADNDVEANLAQVVCSLKNQEECMACGS 810
K A D + CSL + E C CGS
Sbjct: 766 KTATATTVDTSRSQKQDAIACSLDDPEGCEMCGS 799
>gi|71895081|ref|NP_001026008.1| ribonucleoside-diphosphate reductase large subunit [Gallus gallus]
gi|53127690|emb|CAG31174.1| hypothetical protein RCJMB04_2p9 [Gallus gallus]
Length = 790
Score = 1131 bits (2926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/810 (65%), Positives = 656/810 (80%), Gaps = 20/810 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVVKRDGRQERVMFDKITSRIQKLCYGLNADFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ + D+YNY N +GK + +++ +
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMDDLYNYINPHNGKHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++S+V ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINSKVAERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +P+LSSCFLLCMKDDSIEGIYDTLK+CA+
Sbjct: 181 NDIDAAIETYNLLSERWFTHASPTLFNAGTNRPRLSSCFLLCMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGLAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLASIAL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK+I NLNKIID+N+YP+ RSN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEAERSNRRHRPIGIGVQGLADAFILMRFPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ+LN+ IFETIYY AL+AS ELA + GPYETY GSP+SKGILQ DMWN+TPSD WDW
Sbjct: 522 PEAQRLNQQIFETIYYGALEASCELAEQQGPYETYEGSPVSKGILQYDMWNVTPSDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+E I+K GVRNSLL++PMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 582 KALKEKIAKYGVRNSLLLSPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQVVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ ISEIP +LK +YKTVWEI QKT++ MAADRG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIAHNGSIQNISEIPADLKQLYKTVWEISQKTVLKMAADRGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRT+ AA+ I+FT++ L E+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKL-RER 760
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
++ + E N A +VCSL+N++ECM CGS
Sbjct: 761 EKASEEEKERNKAAMVCSLENRDECMMCGS 790
>gi|390596008|gb|EIN05411.1| hypothetical protein PUNSTDRAFT_107092 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 855
Score = 1130 bits (2923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/812 (64%), Positives = 642/812 (79%), Gaps = 21/812 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV KR GRKE V+FDKIT R+ KL YGL +H D V +AQKV +GVY GVTT +LD LAA
Sbjct: 3 YVFKRGGRKEIVQFDKITKRIAKLCYGLDTDHVDAVEIAQKVISGVYPGVTTIELDNLAA 62
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA +T HPDYA+LA R+AVSNLHK TKN FSE +KD+Y Y N ++GK A L++ + Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAVSNLHKETKNKFSEVVKDLYEYVNPKTGKPAGLISQETY 122
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
+I+M NAA LD A++Y+RDF +++FGFKTLERSYLLK++ R ERPQH+LMRV+VGIH
Sbjct: 123 DIVMANAATLDSAVVYERDFQYNFFGFKTLERSYLLKLNGRPAERPQHLLMRVAVGIHGA 182
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D A++TY LMSQ +F H +PTLFNAGTP+PQLSSC+LL M+DDSIEGIYDTLK CA+I
Sbjct: 183 DIKRAVQTYDLMSQKYFNHGSPTLFNAGTPRPQLSSCYLLAMQDDSIEGIYDTLKNCAMI 242
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK+AGGIGL IHNIRA+GSYI GTNG SNGIVPML+ F+ TARYVDQGG KR GAFAIYL
Sbjct: 243 SKTAGGIGLHIHNIRATGSYIAGTNGYSNGIVPMLRAFDSTARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHADIFEF+DLRKN GKEE RARDLFYALW+PDLFM+RV +G WSLFCP++A GL +
Sbjct: 303 EPWHADIFEFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANGDWSLFCPNEAPGLHE 362
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EFE L+ +YE+EGRAK I A+KLW+ I+ +QIETG P+ML+KD+CN KSNQQNLG
Sbjct: 363 VWGPEFEALFERYEKEGRAKKTIPAQKLWYAIMEAQIETGGPFMLYKDACNSKSNQQNLG 422
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+E+SSPEETAVCNLAS+ALP +V D + +D
Sbjct: 423 TIKSSNLCTEIIEYSSPEETAVCNLASMALPSFV------------------DMSTKTYD 464
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L EV K++T NLN++IDVNHYPI + RRSN+RHRP+G+G+QGLADTF++L +PF+SP
Sbjct: 465 FKKLHEVAKVVTYNLNRVIDVNHYPIPSARRSNMRHRPVGLGVQGLADTFMMLRMPFDSP 524
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
A+QLNK IFET+Y+ AL+AS+E+A +DGPYET+ GSP +G LQ D+W +TP+D WDW
Sbjct: 525 AAKQLNKQIFETLYHAALEASSEIAERDGPYETWEGSPAQQGKLQYDLWGVTPTDLWDWK 584
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
SL+E I++ G+RNSLL+APMPTASTSQILG NECFEPYTSNIYTRRVL+GEF VV LL
Sbjct: 585 SLKEKITRTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVCPWLL 644
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
++L EL LW +K II NGS+ I IP+++KAIYKTVWE+ QK ++DMAADRG +I
Sbjct: 645 RELVELKLWDDQMKNMIIANNGSIQSIIGIPDDVKAIYKTVWELSQKVVLDMAADRGAFI 704
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
QSQSLN+H++ P G+LTS+HFY W KG+KTGMYYLRTR AA+AI+FTVD VL K
Sbjct: 705 CQSQSLNVHLQAPTMGQLTSMHFYGWRKGLKTGMYYLRTRPAANAIQFTVDQKVLQAAKE 764
Query: 782 NRADNDVEANL---AQVVCSLKNQEECMACGS 810
R +A + A V + + +A S
Sbjct: 765 GREKGKPKAEVSDAAPAVAPIDAAPQSLAASS 796
>gi|449548832|gb|EMD39798.1| hypothetical protein CERSUDRAFT_112065 [Ceriporiopsis subvermispora
B]
Length = 875
Score = 1129 bits (2921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/783 (66%), Positives = 634/783 (80%), Gaps = 20/783 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV KR RKE V+FDKITAR+ KL YGL KEH DP+ VAQKV AGVY GVTT +LD LAA
Sbjct: 3 YVFKRGTRKERVQFDKITARISKLCYGLDKEHVDPIGVAQKVIAGVYNGVTTAELDNLAA 62
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA +T HPDYA+LA R+AVSNLHK TK +FS + D+Y Y N ++G+ A +++ DVY
Sbjct: 63 ETAAYLTTKHPDYAILAARIAVSNLHKETKKNFSAVVHDLYTYVNPKNGRAAGMISKDVY 122
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
+I+M+NA LD AIIYDRDF+++YFGFKTLERSYLLK++ R ERPQHMLMRV+VGIH
Sbjct: 123 DIVMENAEQLDSAIIYDRDFNYNYFGFKTLERSYLLKINGRTAERPQHMLMRVAVGIHGK 182
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D AL+TY+LMS+ +FTHA+PTLFNAGTP QLSSCFL+CMKDDSIEGIYDTLK CA+I
Sbjct: 183 DLGRALETYNLMSERFFTHASPTLFNAGTPHAQLSSCFLVCMKDDSIEGIYDTLKNCAMI 242
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK+AGGIGL+IHNIRA+GSYI GTNG SNGIVPML+ ++ TARYVDQGG KR GAFAIY+
Sbjct: 243 SKTAGGIGLNIHNIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+FEF+DLRKN GKEE RARDLFYALW+PDLFM+RV G+WSLFCP++A GL +
Sbjct: 303 EPWHADVFEFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVEAGGQWSLFCPNEAPGLHE 362
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EFE LY QYE EGRA+ I A+KLW+ I+ +QIETG P+ML+KD+ N KSNQQNLG
Sbjct: 363 VWGEEFERLYEQYEREGRARKTIEAQKLWYAIMEAQIETGGPFMLYKDAANAKSNQQNLG 422
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+E+S+P+ETAVCNLASIALP ++ +N ++
Sbjct: 423 TIKSSNLCTEIIEYSAPDETAVCNLASIALPSFI--------------------ENGEYN 462
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F+RL EV K++ NLN+IIDVN+YPI RRSN+RHRPIG+G+QGLAD F+ L +PF+SP
Sbjct: 463 FQRLHEVAKVVAFNLNRIIDVNYYPIPEARRSNMRHRPIGVGVQGLADAFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA+ LNK IFETIY+ A++AS+++A KDGPYETY GSP SKG LQ D+W +TP+D WDW+
Sbjct: 523 EARLLNKQIFETIYHAAVEASSDMAEKDGPYETYEGSPASKGELQYDLWGVTPTDLWDWT 582
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
SL+ +++ G+RNSLL+APMPTASTSQILG NECFEPYTSNIYTRRVL+GEF VV LL
Sbjct: 583 SLKAKVARTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
++L + LW+ +K II GSV KI EIP+++KAIYKTVWEI QK ++D+AADRG +I
Sbjct: 643 RELVDRRLWNDDMKNMIIAHGGSVQKIPEIPDDIKAIYKTVWEISQKKVIDLAADRGAFI 702
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
QSQSLN+H++ P G+LTS+HFY W KG+KTGMYYLRTR AA AI+FTVD S L + K
Sbjct: 703 CQSQSLNVHLQSPTSGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSYLKDAKT 762
Query: 782 NRA 784
+A
Sbjct: 763 QQA 765
>gi|320167592|gb|EFW44491.1| ribonucleotide reductase M1 subunit [Capsaspora owczarzaki ATCC
30864]
Length = 785
Score = 1129 bits (2920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/809 (64%), Positives = 651/809 (80%), Gaps = 27/809 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR E V FDKIT+R+ KL YGL+ ++ D V + QKV GVY GVTT +LD LA
Sbjct: 1 MFVKKRDGRTEKVMFDKITSRVNKLCYGLNSDYVDAVEITQKVINGVYPGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS ++D+Y Y N ++GK A L+ADDV
Sbjct: 61 AETAAYLTTKHPDYAILAARIAVSNLHKETKKQFSSVMRDLYEYQNPKTGKPAPLLADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEII +NA LD A+IYDRDF + YFGFKTLERSYLLK+ ++ ERPQHMLMRV+VGIHK
Sbjct: 121 YEIIQRNADILDSAVIYDRDFSYSYFGFKTLERSYLLKLHGKIAERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
++ D L+TY+LMS+ WFTHA+PTLFN+GTP PQLSSCFLL MKDDSIEGIY+TLK CA+
Sbjct: 181 ENIDLVLETYNLMSEKWFTHASPTLFNSGTPHPQLSSCFLLTMKDDSIEGIYETLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRASGSYI GTNG SNG+VPML+VFN TARYVDQGG +R GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHCIRASGSYIAGTNGHSNGLVPMLRVFNTTARYVDQGGNRRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F+FL+L+KN GKEE RARDLF+ALW+PDLFM+RV DG WSL CP + GL
Sbjct: 301 LEPWHADVFDFLELKKNTGKEEQRARDLFFALWIPDLFMKRVEADGNWSLMCPHECPGLE 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+++G +FE LY++YE EG+A+ VI A+KLWF IL SQ E+GTPYML+KD+CN KSNQ+NL
Sbjct: 361 ETYGDKFEELYTRYEREGKARKVIKAQKLWFAILESQTESGTPYMLYKDACNIKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+SSP+E AVCNLAS++LP +VR +R +
Sbjct: 421 GTIKCSNLCTEIVEYSSPDEVAVCNLASLSLPMFVR-------------------SDRTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L E+T+++T+NLN+IID+N+YP+ +SN+RHRPIG+G+QGLAD FI + +PF+S
Sbjct: 462 DFKKLHEITQVVTKNLNRIIDINYYPVPEAEKSNMRHRPIGLGVQGLADAFIQMRVPFDS 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNIT-PSDRWD 599
+A++LN++IFETIY+ AL AS E+A K GPYETY GSP+S+GILQ DMW + S WD
Sbjct: 522 EDAKKLNREIFETIYHAALTASVEMAKKSGPYETYAGSPVSQGILQHDMWGVKETSGLWD 581
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W +LR I+++G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN+H
Sbjct: 582 WDALRAQIAQHGIRNSLLVAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNQH 641
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL DL ELGLW+ +K KII + GS++ I EIP ++A+YKTVWE+ QKTL+DMAADRG
Sbjct: 642 LLHDLMELGLWNDRMKNKIISQGGSIAGIEEIPAHIRALYKTVWELSQKTLIDMAADRGA 701
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YIDQSQS N+H+ +P+ GKLTS+HFYAW +G+KTGMYYLRTR AA+AI+FTVD +
Sbjct: 702 YIDQSQSFNVHIAEPNFGKLTSMHFYAWKRGLKTGMYYLRTRPAANAIQFTVD------Q 755
Query: 780 KANRADNDVEANLAQVVCSLKNQEECMAC 808
KA A V+ A +VCSL+N+E C+ C
Sbjct: 756 KALAAPQKVDEE-AAMVCSLQNKEACLMC 783
>gi|428184327|gb|EKX53182.1| hypothetical protein GUITHDRAFT_100891 [Guillardia theta CCMP2712]
Length = 806
Score = 1128 bits (2918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/826 (64%), Positives = 646/826 (78%), Gaps = 36/826 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KR+G+ E V+FDKIT+R+ KLSYGL+ +P+++AQK G+Y GV T+QLD LA
Sbjct: 1 MYVVKRNGKMERVQFDKITSRISKLSYGLNLNFVEPLVIAQKCVNGLYSGVKTSQLDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDY++LA R+AVSNLHK TK FSE + D Y Y + SG+K+ L+ADDV
Sbjct: 61 AETAAYLTTEHPDYSILAARIAVSNLHKQTKKVFSEVMTDCYTYVDPSSGRKSQLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIM N LD AIIYDRD+++DYFGFKTLERSYLLK++ +V ERPQHMLMRV++GIHK
Sbjct: 121 YEIIMANKDQLDSAIIYDRDYNYDYFGFKTLERSYLLKLNGQVAERPQHMLMRVAIGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D A++TY MSQ +FTHA+PTLFN+GTP PQ+SSCFLL MKDDSIEGIYDTLK CA
Sbjct: 181 QDIAGAIETYEYMSQKYFTHASPTLFNSGTPHPQMSSCFLLHMKDDSIEGIYDTLKVCAQ 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLS+HNIR+ SYI GTNG+SNG+VPML+VFN TARYVDQGGGKR GAFAIY
Sbjct: 241 ISKSAGGIGLSVHNIRSRNSYIRGTNGTSNGLVPMLRVFNSTARYVDQGGGKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+FEFLDLRKN G EE R RDLF ALW+PDLFMERV + W LFCP + GL+
Sbjct: 301 LEPWHPDVFEFLDLRKNTGTEENRCRDLFLALWIPDLFMERVEKNEDWCLFCPCECPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D+WG EFE LY +YE+E +A+ + A++LWF IL +Q ETGTPY+LFKD CNRKSNQQNL
Sbjct: 361 DTWGEEFESLYLKYEKENKARKTVRAQELWFAILEAQTETGTPYILFKDHCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++SP+E AVCNLASI LP ++++ F
Sbjct: 421 GTIKCSNLCTEIVEYTSPDEVAVCNLASIGLPMFIQDGQ--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ ++L EVT++IT NLNKIIDVN+YP+E R SN+RHRPIGIG+QGLAD F L +PF+S
Sbjct: 461 NHQKLMEVTQVITRNLNKIIDVNYYPVEEARLSNMRHRPIGIGVQGLADVFQKLRMPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A+ LN+DI ETIYY A+ AS ELA K GPYETY GSP SKGILQ DMW + PS RW+W
Sbjct: 521 ESAKALNRDIMETIYYGAVTASIELAEKFGPYETYQGSPASKGILQYDMWGVEPSSRWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ ++E ++K+G+RNSLL+APMPTASTSQILGNNECFEPYTSNIYTRRV+SGEF VVN HL
Sbjct: 581 AEVKENLAKHGMRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVMSGEFAVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LK+LTELGLW+ +K +I+ GSV ISEIPE+++ IYKTVWE+K ++L+DMAADRG +
Sbjct: 641 LKELTELGLWNKDMKNRILAAQGSVQGISEIPEDVREIYKTVWELKMRSLIDMAADRGAF 700
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL---N 777
IDQSQSLN+ + P+ KLTS+HFY+W KG+KTG YYLRTR AADAI+FTVD S L N
Sbjct: 701 IDQSQSLNLFIAAPNPSKLTSMHFYSWKKGLKTGCYYLRTRPAADAIQFTVDKSALQTSN 760
Query: 778 NEKA----------NRADNDV---EANLAQVVCSLKNQEECMACGS 810
E D+D+ + A++ CSLKN++EC+ C S
Sbjct: 761 KENVMPSNTMGQLMKNVDDDIRQTQLAAAKLACSLKNKDECLMCSS 806
>gi|326435406|gb|EGD80976.1| Rrm1 protein [Salpingoeca sp. ATCC 50818]
Length = 779
Score = 1128 bits (2917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/810 (63%), Positives = 652/810 (80%), Gaps = 31/810 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGRKE V FDKIT+R+ KLSYGL+ EH D V + ++V +GVY GVTT +LD+LA
Sbjct: 1 MYVVKRDGRKEKVLFDKITSRVSKLSYGLNTEHVDAVEITKRVISGVYTGVTTVELDQLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+ T HPDYA+LA R+AVSNLHK+T FS+ I +++Y N +G+ A L++ +
Sbjct: 61 AETAASFTTKHPDYAILAARIAVSNLHKMTHKQFSDVIDALHHYVNPETGRPAPLISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M N + II++RDF+F++FGFKTLERSYLLKM+ +V ERPQHM MRV++G+H
Sbjct: 121 YEQVMANKEVYNSHIIFERDFNFNFFGFKTLERSYLLKMNGKVAERPQHMFMRVAIGMHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+ MS+ +FTHA+PTLFN+GTP PQLSSCFLL MKDDSIEGIYDTLK CA+
Sbjct: 181 EDVDAAIETYNYMSEGFFTHASPTLFNSGTPIPQLSSCFLLTMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGLS+HNIRASGSYI GTNG SNG+VPML+VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLSVHNIRASGSYIAGTNGHSNGLVPMLRVFNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FL+L+KN G EE RARDLF+ALWVPDLFM+RV + +W+L CP + GL+
Sbjct: 301 LEPWHADIFDFLELKKNTGVEEQRARDLFFALWVPDLFMKRVEANEEWTLMCPHECPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G EFE LY +YE EG+ + +SA KLWF IL++Q ETGTPYML+KD+CN+KSNQ+NL
Sbjct: 361 DTYGDEFERLYEKYEAEGKGRKKVSASKLWFAILDAQTETGTPYMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI SSNLCTEI+E+SSP+E AVCNL SIAL ++V +K F
Sbjct: 421 GTIHSSNLCTEIIEYSSPDEVAVCNLGSIALNKFVGDK--------------------TF 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+++L EVTK++T NLNKIID+N+YP+ R+SN+RHRPIGIG+QGLAD FIL+ LPF+S
Sbjct: 461 DYKKLHEVTKVLTRNLNKIIDINYYPVPEARKSNMRHRPIGIGVQGLADAFILMRLPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+++N+ IFETIY+ AL+AS E+A +GPYET+ GSP S+GILQ DMW++ P+D WDW
Sbjct: 521 DEAREVNRKIFETIYHGALEASTEIASVEGPYETFEGSPTSEGILQFDMWDVKPTDLWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SLRE + K+G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVNKHL
Sbjct: 581 ESLRERVKKDGIRNSLLVAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGEFQVVNKHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL E+GLWS +K +II NGS+ KI IP+++KA+YKTVWE+ Q+TL+DMAADRG +
Sbjct: 641 LKDLVEMGLWSDEVKDQIILNNGSIQKIEGIPDDIKALYKTVWELSQRTLIDMAADRGAF 700
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQS N+H+ P+ GKLTS+HFYAW +G+KTGMYYLR+RAA +AI+FTVD
Sbjct: 701 IDQSQSFNVHISDPNFGKLTSMHFYAWKRGLKTGMYYLRSRAATNAIQFTVD-------- 752
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
A EA A ++CS+ N++EC+ C +
Sbjct: 753 ---AKKAREAKEAAMMCSIDNRDECVMCSA 779
>gi|397531935|gb|AFO54477.1| ribonucleotide reductase large subunit R1ii [Carassius carassius]
Length = 793
Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/812 (64%), Positives = 647/812 (79%), Gaps = 21/812 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDG +E V FDKIT+R++KL YGL+ E DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGHQERVMFDKITSRIQKLCYGLNAEFVDPTQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE A +T HPDYA+LA R+AVSNLHK TK FSE ++D+YNY N +G + +++ +
Sbjct: 61 AEITATLTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNGHHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AII+DRDF +++FGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIFDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIAAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIF+FL+L+KN GKEE RARDLFYALW+PDLFM+RV + WSL CPSD GL
Sbjct: 301 LEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNADWSLMCPSDCPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY +YE+EGRAK V+ A++LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 ECWGEEFEKLYMKYEQEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLASIAL YV + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPERTF 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LA VTK+I +NLNKIIDVN+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFQKLASVTKVIVKNLNKIIDVNYYPVREAENSNKRHRPIGIGVQGLADAFILMRFPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LN IFETIYY AL++S ELA + GPYETY GSP+SKGILQ DMW TP+D WDW
Sbjct: 522 AEAQLLNTQIFETIYYAALESSCELAAECGPYETYAGSPVSKGILQYDMWEKTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+E I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 AALKEKITKHGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K ++I +NGS+ I IP++LK +YKTVWEI QKT++ MAADRG +
Sbjct: 642 LKDLTERGLWNEEMKNQLIAQNGSIQAIPTIPDDLKELYKTVWEISQKTILKMAADRGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL--NN 778
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRT+ AA+ I+FT+D L
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLDKEKLKETQ 761
Query: 779 EKANRADNDVEANLAQVVCSLKNQEECMACGS 810
E + + E N A +VCSL+N++EC+ CGS
Sbjct: 762 ESTSNEEETKERNKAAMVCSLENRDECLMCGS 793
>gi|311748426|ref|ZP_07722211.1| ribonucleoside-diphosphate reductase, alpha subunit [Algoriphagus
sp. PR1]
gi|126576939|gb|EAZ81187.1| ribonucleoside-diphosphate reductase, alpha subunit [Algoriphagus
sp. PR1]
Length = 799
Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/814 (64%), Positives = 654/814 (80%), Gaps = 19/814 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDGR+E VRFDKITAR++ L Y L + P+ VA+KV G+Y GVTT++LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITARIENLCYELDPKFIQPIEVAKKVIDGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE A++TV HPDYA+LA R+A+SNLHK T SFS T+K +Y Y N ++G ASL+ +V
Sbjct: 61 AEVCASLTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTYINPKTGGNASLIDPEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y ++ KNAA LD I Y RDF +DYFG+KTLERSYL+++D +VVERPQHMLMRV+VGIHK
Sbjct: 121 YGVVKKNAAKLDAIIDYKRDFGYDYFGYKTLERSYLIRLDGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TYHL+S+ WFTHATPTLFNAGTP+PQLSSCFLL MKDDSI+GIYDTLK+CA
Sbjct: 181 EDIDAAVETYHLLSEKWFTHATPTLFNAGTPKPQLSSCFLLTMKDDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIH++RA GSYI GTNG SNGIVPML+ F+ TARYVDQGGGKRKG+FAIY
Sbjct: 241 ISQSAGGIGLSIHHVRAKGSYIKGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+ +FLDL++N GKEE RARDLFYALW+ DLFM+RV + WSLFCP++A GL+
Sbjct: 301 LEPWHADVKDFLDLKRNHGKEEMRARDLFYALWISDLFMKRVEQNETWSLFCPNEAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EGRA+ + A++LWFEIL SQIETGTPYML+KD+ N+KSNQQNL
Sbjct: 361 DCYGEEFERLYEKYEKEGRARETVKAQELWFEILESQIETGTPYMLYKDAANKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+++P+E AVCNLAS+ALP++VR D K F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASLALPKFVRT--------------GPDGK-LFF 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L E+TK+ T NLNK+IDVN+YP++ RRSN RHRPIG+G+QGLAD FI+L +PFES
Sbjct: 466 DHQKLYEITKVATRNLNKVIDVNYYPVDEARRSNFRHRPIGLGVQGLADAFIMLRMPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA+ LN+DIFETIYY A++ S ELA +G YETY GSP SKGILQ DMW +TP S+RW+
Sbjct: 526 AEAKGLNEDIFETIYYAAVETSMELAKVEGTYETYEGSPASKGILQFDMWGVTPKSERWN 585
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W+ L+E + K G+RNSLLVAPMPTASTSQILGNNECFEPYT+NIYTRR LSGEFIVVNKH
Sbjct: 586 WTELKEKVKKVGLRNSLLVAPMPTASTSQILGNNECFEPYTTNIYTRRTLSGEFIVVNKH 645
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
L+KDL LGLW ++ ++I NGSV + +P+ +K +YKTVWEI QK ++D+AADRG
Sbjct: 646 LMKDLIRLGLWDDNMRNRLISTNGSVQSLPGVPQNIKDLYKTVWEISQKVIIDLAADRGA 705
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YI QSQS+N+ ++ P+ GKLTS+HFYAW KG+KTGMYYLR++AAA AIKFT+D S L +
Sbjct: 706 YICQSQSMNVFLQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAAASAIKFTLDKSNLEPK 765
Query: 780 KANRADNDVEA-NLAQ--VVCSLKNQEECMACGS 810
+++A +L Q + CSL + + C CGS
Sbjct: 766 VDKAMQEEIDAKSLKQDAISCSLDDPDGCEMCGS 799
>gi|392565961|gb|EIW59137.1| hypothetical protein TRAVEDRAFT_28460 [Trametes versicolor
FP-101664 SS1]
Length = 888
Score = 1125 bits (2910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/793 (66%), Positives = 635/793 (80%), Gaps = 22/793 (2%)
Query: 2 YVIKRDG--RKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDEL 59
+V KR RKE V+FDKITAR+ KL YGL K+H DPV + QKV AGVY GVTT +LD L
Sbjct: 4 FVFKRGEHRRKERVQFDKITARIAKLCYGLDKDHVDPVGITQKVIAGVYPGVTTVELDNL 63
Query: 60 AAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADD 119
AAETAA +T HPDYA+LA R+AVSNLHK TK SFS I D+YNY N ++G+ A +++ +
Sbjct: 64 AAETAAYLTTKHPDYAILAARIAVSNLHKETKKSFSAVISDLYNYVNPKNGRAAGMISKE 123
Query: 120 VYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIH 179
+YEI+ KNA LD AIIYDRDF +++FGFKTLERSYLLK++ RV ERPQH++MRV+VGIH
Sbjct: 124 IYEIVQKNAEVLDSAIIYDRDFSYNFFGFKTLERSYLLKINGRVAERPQHLIMRVAVGIH 183
Query: 180 KDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCA 239
D D A++TYHLMS+ +FTHA+PTLFNAGTP PQLSSCFL+ MKDDSIEGIY TLK CA
Sbjct: 184 GADIDRAIETYHLMSERYFTHASPTLFNAGTPNPQLSSCFLVSMKDDSIEGIYSTLKDCA 243
Query: 240 IISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAI 299
ISK+AGGIG++IHNIRA+GSYI GTNG SNGIVPML+V++ TARYVDQGG KR GAFAI
Sbjct: 244 NISKTAGGIGINIHNIRATGSYIAGTNGYSNGIVPMLRVYDATARYVDQGGNKRPGAFAI 303
Query: 300 YLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGL 359
YLEPWHAD+FEF+DLRKN GKEE RARDLFYALW+PDLFM+RV GKWSLFCPS+A GL
Sbjct: 304 YLEPWHADVFEFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVESGGKWSLFCPSEAPGL 363
Query: 360 ADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQN 419
+ WG EFE LY QYE EGRAK I A+KLW+ IL +QIETG P+ML+KD+CN KSNQQN
Sbjct: 364 HEVWGEEFERLYEQYEREGRAKKTIEAQKLWYAILEAQIETGGPFMLYKDACNAKSNQQN 423
Query: 420 LGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRL 479
LGTIKSSNLCTEIVE+SSP+ETAVCNLASIALP ++ +N
Sbjct: 424 LGTIKSSNLCTEIVEYSSPDETAVCNLASIALPSFI--------------------ENGK 463
Query: 480 FDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFE 539
++F++L +VTK++ NLN+IIDVNHYPI +RSN+RHRPIG+G+QGLAD F+ L +PF+
Sbjct: 464 YNFQKLHDVTKVVAFNLNRIIDVNHYPIPEAQRSNMRHRPIGVGVQGLADAFMALRMPFD 523
Query: 540 SPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWD 599
EA++LN+ IFETIY+ A++AS E+A + G YETY GSP S+G LQ D+W ITP+D WD
Sbjct: 524 GVEARKLNQQIFETIYHAAVEASCEMAQQFGTYETYQGSPASEGKLQYDLWGITPTDLWD 583
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W+SL+ ++++G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL+GEF VV
Sbjct: 584 WTSLKAKVAQHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPW 643
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL++L ELGLW+ +K II NGS+ I IP+++KAIYKTVWEI QK ++D+AADRG
Sbjct: 644 LLRELVELGLWNDDMKNMIIANNGSIQTIDIIPDDVKAIYKTVWEISQKKVLDLAADRGA 703
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
+I QSQSLN+H++ P G+LTS+HFY W KG+KTGMYYLRTR AA AIKFTVD+S L N
Sbjct: 704 FICQSQSLNVHLQSPTTGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIKFTVDSSFLKNA 763
Query: 780 KANRADNDVEANL 792
N V L
Sbjct: 764 AKKPKVNGVNGVL 776
>gi|390945294|ref|YP_006409055.1| ribonucleoside-diphosphate reductase subunit alpha [Belliella
baltica DSM 15883]
gi|390418722|gb|AFL86300.1| ribonucleoside-diphosphate reductase, alpha subunit [Belliella
baltica DSM 15883]
Length = 799
Score = 1125 bits (2910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/814 (64%), Positives = 651/814 (79%), Gaps = 19/814 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDGR+E VRFDKIT+R++KL YGL + P+ VA+KV G+Y GVTTT+LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITSRIEKLCYGLDDRYIQPIEVAKKVIDGLYDGVTTTELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE A++TV HP+YA LA R+AVSNLHK T SFS T+K +Y Y N ++ + A+L+A DV
Sbjct: 61 AEICASLTVRHPEYATLAARIAVSNLHKTTSQSFSNTMKRLYTYINPKTEENAALIASDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+ K+AA LD AI Y+RDF +DYFGFKTLERSYL+++D +VVERPQHMLMRV+VGIHK
Sbjct: 121 YGIVKKHAAKLDEAIDYNRDFAYDYFGFKTLERSYLIRLDGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHATPTLFNAGTP+PQLSSCFLL MKDDSI+GIYDTLK+ A
Sbjct: 181 EDIDAAIETYNLLSEKWFTHATPTLFNAGTPKPQLSSCFLLTMKDDSIDGIYDTLKQTAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA GSYI GTNG SNGIVPML+ F+ TARYVDQGGGKRKG+FAIY
Sbjct: 241 ISQSAGGIGLSIHNVRAKGSYIKGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+ +FL+L++N GKEE RARDLFYA+W+PDLFM RV + WSLFCP++A GLA
Sbjct: 301 LEPWHADVKDFLELKRNHGKEEMRARDLFYAMWIPDLFMRRVEQNESWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D EF+ LY +YE EGRA+ I A++LWFEIL SQIETGTPYML+KD+ N+KSNQQNL
Sbjct: 361 DCHSEEFDKLYEKYEREGRARETIKAQELWFEILESQIETGTPYMLYKDAANKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP+E AVCNLASIALP++V E V+ F
Sbjct: 421 GTIKSSNLCTEIIEYTSPDEVAVCNLASIALPKFVVEGKDGVKK---------------F 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L E+TK+ T NLNK+IDVN+YP+E +RSN RHRPIG+G+QGLAD FILL +PF+S
Sbjct: 466 DHQKLYEITKVATRNLNKVIDVNYYPVEEAKRSNFRHRPIGLGVQGLADAFILLRMPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA++LN+DI ET+Y+ A++ S E+A +G YETY GSP+SKG Q D W + P S+RW+
Sbjct: 526 DEARRLNEDIAETMYFAAMETSMEIAKVEGTYETYAGSPVSKGQFQFDHWAVQPKSNRWN 585
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W+ L+E + K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYTRR LSGEFIVVNKH
Sbjct: 586 WNDLKEKVKKYGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
L++DL LGLW+ +K ++I NGSV I IP+ +K +YKTVWEI QKT++DMAADRG
Sbjct: 646 LMRDLINLGLWNDNMKNRLIAANGSVQNIPGIPQNIKDLYKTVWEISQKTIIDMAADRGA 705
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YI QSQS+N+ ++ P+ GKLTS+HFYAW KG+KTGMYYLR++AA AI+FTVD S L +
Sbjct: 706 YICQSQSMNVFLQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAATSAIQFTVDKSALVDT 765
Query: 780 KANRADNDVEANLAQ---VVCSLKNQEECMACGS 810
N+ D + + + CSL N ++C CGS
Sbjct: 766 PTNQVSIDTSVSQQKQDAIACSLDNPDDCEMCGS 799
>gi|392871374|gb|EAS33278.2| ribonucleoside-diphosphate reductase large chain [Coccidioides
immitis RS]
Length = 877
Score = 1124 bits (2908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/788 (65%), Positives = 635/788 (80%), Gaps = 18/788 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++ + A +++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYINPKNNRPAPMISQKT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+MK++A L+ AI+YDRDF++ YFGFKTLERSYLL+++ +V ERPQHM+MRV+VGIH
Sbjct: 121 YEIVMKHSAELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + A++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 EDIEKAIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNGSSNGI+PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGSSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIFEFLDLRKN GKEE RARDLF ALW PDLFM+RV +G W+LFCP++A GLA
Sbjct: 301 LEPWHSDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY QYE+EGR + I A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEQYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLAS+ALP YV PV+ +
Sbjct: 421 GTIRSSNLCTEIIEYTSPDEVAVCNLASLALPTYVD----PVRGE--------------Y 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVT+++ NLNKIID NHYP+ R+SN RHRPI +G+QGLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVTQVLVRNLNKIIDGNHYPVPEARKSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ AL AS ++A DGPYETY GSP+S+GILQ DMWN+TP+D WDW
Sbjct: 523 PEARQLNIQIFETIYHAALTASCDIAKVDGPYETYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DSLKRDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II E GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAY 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 781 ANRADNDV 788
N A + V
Sbjct: 763 TNVARSSV 770
>gi|338210538|ref|YP_004654587.1| ribonucleoside-diphosphate reductase subunit alpha [Runella
slithyformis DSM 19594]
gi|336304353|gb|AEI47455.1| ribonucleoside-diphosphate reductase, alpha subunit [Runella
slithyformis DSM 19594]
Length = 815
Score = 1124 bits (2906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/773 (67%), Positives = 640/773 (82%), Gaps = 16/773 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGR+E V+FDKIT+R++KL YGL + P+ VA+KV AG+Y GVTT +LD LA
Sbjct: 1 MYVIKRDGRRESVKFDKITSRIEKLCYGLDALYVQPIEVAKKVVAGIYDGVTTAELDVLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT HPDYA+LA R+A+SNLHK T SFS T+K +Y Y + ++G+ ASL++ +
Sbjct: 61 AETAASMTTKHPDYAILAARIAISNLHKNTLKSFSATMKQLYTYTDPKTGENASLISKEA 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++II K+AA LD IIYDRD+ +DYFG+KTLE+SYLLK++ ++ ERPQHMLMRV+VGIH
Sbjct: 121 HDIIRKHAALLDSTIIYDRDYGYDYFGYKTLEKSYLLKVNGKIAERPQHMLMRVAVGIHL 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DS ++TY+L+S+ WFTHATPTLFNAGTP+PQ+SSCFLL MKDDSI+GIYDTLK+CA+
Sbjct: 181 DDIDSVIETYNLLSERWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDL++N GKEE RARDLFYA+W+PDLFM+RV + WSL CP + GLA
Sbjct: 301 LEPWHADIFEFLDLKRNHGKEELRARDLFYAMWIPDLFMKRVEANDTWSLLCPHECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
DS+G EFE LY +YE EG+ + I A+ LWF I+ SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 361 DSYGDEFEQLYEKYEREGKVRKTIKAQDLWFAIMESQIETGTPYMLYKDHANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP+E AVCNLASI+LP++V E+G + F
Sbjct: 421 GTIKSSNLCTEIMEYTSPDEVAVCNLASISLPKFV-EQGTDGFLH--------------F 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ +L E+TK++T+NLNKIID+N+YP+ RSN RHRPIGIGIQGLAD F+++ +PFES
Sbjct: 466 NHGKLFEITKVVTKNLNKIIDLNYYPVPEAERSNKRHRPIGIGIQGLADAFLMMRMPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA++LN+DI ETIY A+ AS ELA GPYET+ GSP+S+GI Q DMWN+TP S RW+
Sbjct: 526 EEARRLNEDIHETIYCGAMTASMELAKTQGPYETWKGSPISQGIFQFDMWNVTPKSGRWN 585
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W LR+ + K GVRNSLL+APMPTASTSQILGNNECFEP+TSN+Y RRVLSGEFIVVNK+
Sbjct: 586 WEQLRKDVVKFGVRNSLLLAPMPTASTSQILGNNECFEPFTSNLYVRRVLSGEFIVVNKY 645
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDL + GLW+ ++K K++ NGSV KI E+P LK +YKT WEIKQKT+VDMAADRG
Sbjct: 646 LLKDLVKEGLWNDSMKNKLMAHNGSVQKIDEVPSHLKELYKTAWEIKQKTIVDMAADRGA 705
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
YI QSQSLNI M+ ++GKLTS+HFYAW KG+KTGMYYLRT+AA DA+K TV+
Sbjct: 706 YICQSQSLNIFMDNANYGKLTSMHFYAWKKGLKTGMYYLRTQAAVDAVKITVE 758
>gi|395521330|ref|XP_003764771.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Sarcophilus harrisii]
Length = 911
Score = 1123 bits (2905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/804 (65%), Positives = 646/804 (80%), Gaps = 19/804 (2%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DGR+E V FDKIT+R++KL YGL+ E DP + KV G+Y GVTT +LD LAAET+A
Sbjct: 127 DGRQERVMFDKITSRIQKLCYGLNMEFVDPAQITMKVIQGLYSGVTTVELDTLAAETSAT 186
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
+T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +G+ + +VA +I++
Sbjct: 187 LTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPFNGRHSPMVAKSTLDIVLA 246
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSA 186
N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK+D D+A
Sbjct: 247 NKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAA 306
Query: 187 LKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAG 246
++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+ISKSAG
Sbjct: 307 IETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAG 366
Query: 247 GIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHA 306
GIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIYLEPWH
Sbjct: 367 GIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHL 426
Query: 307 DIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIE 366
DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV ++ WSL CP++ GL D WG E
Sbjct: 427 DIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVENNQDWSLMCPNECPGLDDVWGEE 486
Query: 367 FEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSS 426
FE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNLGTIK S
Sbjct: 487 FEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCS 546
Query: 427 NLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLA 486
NLCTEIVE++S +E AVCNLAS+AL +V + FDF++LA
Sbjct: 547 NLCTEIVEYTSKDEVAVCNLASLALNMFV-------------------TLEHTFDFQKLA 587
Query: 487 EVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQL 546
EVTK+I NLNKII++N+YP+ SN RHRPIGIG+QGLAD FIL+ PFESPEAQ L
Sbjct: 588 EVTKVIVRNLNKIININYYPVPEASLSNKRHRPIGIGVQGLADAFILMRYPFESPEAQLL 647
Query: 547 NKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREM 606
NK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW+ L+E
Sbjct: 648 NKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDWNVLKEK 707
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTE 666
I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HLLKDLTE
Sbjct: 708 IAKYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTE 767
Query: 667 LGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQS 726
GLW+ +K +II NGS+ I EIPE+LK +YKTVWEI QKT++ MAADRG +IDQSQS
Sbjct: 768 RGLWNEEMKNQIIACNGSIQSIPEIPEDLKQLYKTVWEISQKTVLKMAADRGAFIDQSQS 827
Query: 727 LNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADN 786
LNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L ++ D
Sbjct: 828 LNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKEKEKVLKDE 887
Query: 787 DVEANLAQVVCSLKNQEECMACGS 810
+ E N A +VCSL+N++EC+ CGS
Sbjct: 888 EKERNTAAMVCSLENRDECLMCGS 911
>gi|431797144|ref|YP_007224048.1| ribonucleoside-diphosphate reductase subunit alpha [Echinicola
vietnamensis DSM 17526]
gi|430787909|gb|AGA78038.1| ribonucleoside-diphosphate reductase, alpha subunit [Echinicola
vietnamensis DSM 17526]
Length = 799
Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/815 (63%), Positives = 654/815 (80%), Gaps = 21/815 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDGR+E VRFDKIT R++ L GL + P+ VA+KV G+Y GVTT++LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITTRIENLCDGLDSRYIQPIEVAKKVIDGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE A+MTV HPDYA+LA R+A+SNLHK T SFS T+K +Y Y N ++G A+L+A DV
Sbjct: 61 AEVCASMTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTYVNPKTGDNAALIAPDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+ K+AA LD I Y RDF++D+FGFKTLERSYL+K+D +VVERPQHMLMRV++GIHK
Sbjct: 121 YGIVKKHAARLDEIIDYSRDFNYDFFGFKTLERSYLIKLDDKVVERPQHMLMRVAIGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TYHL+S+ WFTHATPTLFNAGTP+PQLSSCFLL MK+DSI+GIYDTLK+CA
Sbjct: 181 EDLDAAIETYHLLSEKWFTHATPTLFNAGTPKPQLSSCFLLTMKEDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIH++RA GSYI GTNG SNGIVPML+ F+ TARYVDQGGGKRKG+FAIY
Sbjct: 241 ISQSAGGIGLSIHDVRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI +FL+L+KN GKEE RARDLFYALW+ DLFM+RV + +WSLFCP++A GL+
Sbjct: 301 LEPWHADIKDFLELKKNHGKEELRARDLFYALWISDLFMKRVEANEEWSLFCPNEAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ G EFE LY +YE+EGRA+ + A++LWFE+L SQIETGTPYML+KD+ N KSNQ+NL
Sbjct: 361 ECHGEEFEKLYEKYEKEGRARETVKAQELWFEVLESQIETGTPYMLYKDAANGKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++SP+E AVCNLASIALP++++ + + F
Sbjct: 421 GTIKSSNLCTEIMEYTSPDEVAVCNLASIALPKFIK---------------TDSQGKKSF 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L E+TK++T+NLN++ID+N+YP++ +SN RHRPIGIG+QGLAD FI+L +PF+S
Sbjct: 466 DHQKLYEITKVVTKNLNRVIDINYYPVKEAEKSNFRHRPIGIGVQGLADAFIMLRMPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA LN+DIFETIYY A++ S ELA G YETY GSP+S+G Q D+W +TP S RW+
Sbjct: 526 AEAAGLNEDIFETIYYAAMETSMELAKVHGTYETYEGSPVSQGQFQFDLWGVTPKSGRWN 585
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W+ L+E ++K GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRR LSGEFIVVNKH
Sbjct: 586 WADLKERVAKFGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
L+KDL LGLW+ ++K ++I NGSV + E+P+ +K +YKTVWEI QK +++MAADRG
Sbjct: 646 LMKDLIRLGLWNDSMKNRLIAANGSVQDMPEVPQNIKDLYKTVWEISQKVVINMAADRGA 705
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YI QSQS+N+ M++P+ GKLTS+HFYAW KG+KTGMYYLR++AA AI+FTVD L N
Sbjct: 706 YICQSQSMNVFMQEPNFGKLTSMHFYAWKKGLKTGMYYLRSKAATSAIQFTVDKESLKNS 765
Query: 780 KANRADNDVEANLAQ----VVCSLKNQEECMACGS 810
+ A + E N A + CSL N ++C CGS
Sbjct: 766 QQATAATE-EPNKANSQDAIACSLDNPDDCEMCGS 799
>gi|303316562|ref|XP_003068283.1| Ribonucleoside-diphosphate reductase large chain, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240107964|gb|EER26138.1| Ribonucleoside-diphosphate reductase large chain, putative
[Coccidioides posadasii C735 delta SOWgp]
Length = 877
Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/788 (65%), Positives = 635/788 (80%), Gaps = 18/788 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++ + A +++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYINPKNNRPAPMISQKT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+MK++A L+ AI+YDRDF++ YFGFKTLERSYLL+++ +V ERPQHM+MRV+VGIH
Sbjct: 121 YEIVMKHSAELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + A++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 EDIEKAIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNGSSNGI+PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGSSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIFEFLDLRKN GKEE RARDLF ALW PDLFM+RV +G W+LFCP++A GLA
Sbjct: 301 LEPWHSDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY QYE+EGR + I A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEQYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLAS+ALP YV PV+ +
Sbjct: 421 GTIRSSNLCTEIIEYTSPDEVAVCNLASLALPTYVD----PVRGE--------------Y 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVT+++ NLNKIID NHYP+ R+SN RHRPI +G+QGLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVTQVLVRNLNKIIDGNHYPVPEARKSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ AL AS ++A DGPYETY GSP+S+G+LQ DMWN+TP+D WDW
Sbjct: 523 PEARQLNIQIFETIYHAALTASCDIAKVDGPYETYEGSPVSQGVLQYDMWNVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DSLKRDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II E GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSIQSIPNIPADIKALYKTVWEISQRTIVQMAADRGAY 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 781 ANRADNDV 788
N A + V
Sbjct: 763 TNVARSSV 770
>gi|397531933|gb|AFO54476.1| ribonucleotide reductase large subunit R1i [Carassius carassius]
Length = 793
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/812 (63%), Positives = 653/812 (80%), Gaps = 21/812 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ E DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNAEFVDPTHITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE +A +T HPDYA+LA R+AVSNLHK TK FSE ++D+YNY N + + + +V+ +
Sbjct: 61 AEISATLTTKHPDYAILAARIAVSNLHKETKKVFSEAMEDLYNYVNPLNDRHSPMVSKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AII+DRDF +++FGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIFDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSI+GIYDTLK+CA+
Sbjct: 181 EDIAAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIDGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIF+FL+L+KN GKEE RARDLFYALW+PDLFM+RV +G W L CP+D GL
Sbjct: 301 LEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNGDWCLMCPNDCPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE+LY++YE+EG+AK V+ A++LW I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 ECWGEEFENLYTKYEKEGKAKRVVKAQQLWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASVALNMYV-------------------TPERTF 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LA VTK+I +NLNKIID+N+YP++ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFQKLASVTKVIVKNLNKIIDINYYPVQEAENSNKRHRPIGIGVQGLADAFILMRFPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LN IFETIYY AL++S ELA + GPYETY GSP+SKGILQ DMW+ TP+D WDW
Sbjct: 522 AEAQLLNTQIFETIYYAALESSCELAAEFGPYETYAGSPVSKGILQYDMWDKTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+E I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 EALKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K ++I +NGS+ I IP++LK +YKTVWEI QKT++ MAADRG +
Sbjct: 642 LKDLTERGLWNEEMKNQLIAQNGSIQGIPTIPDDLKELYKTVWEISQKTILKMAADRGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL--NN 778
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRT+ AA+ I+FT++ L
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLKETQ 761
Query: 779 EKANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ A+ + E N+A +VCSL+N++EC+ CGS
Sbjct: 762 KSASNEEEIKELNMAAMVCSLENRDECLMCGS 793
>gi|189196218|ref|XP_001934447.1| ribonucleoside-diphosphate reductase large chain [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187980326|gb|EDU46952.1| ribonucleoside-diphosphate reductase large chain [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 795
Score = 1122 bits (2902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/812 (63%), Positives = 651/812 (80%), Gaps = 23/812 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL +H DP + KV +GVY+GVTT QLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK TK FS ++D+Y+Y N ++GK +++D V
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVEDLYSYVNPKNGKSQPMISDHV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I +A L+ AI+YDRDF++ +FGFKTLERSYLL+++ +V ERPQHMLMRV+VGIH
Sbjct: 121 YKVIQDHAEELNSAIVYDRDFNYQFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D A++TY MSQ +FTHA+PTLFNAGTP PQ+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 EDIPKAIETYDYMSQKYFTHASPTLFNAGTPSPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNG+SNG++PML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F FLDLRKN GKEE RARDLFYALW+PDLFM+RV+++G+W+L CP++ GLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY YE++ + + + A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKQNKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+++P+E AVCNLAS+ALP +V D K F
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASLALPSFV------------------DYKRGEF 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++T NLNKII+VNHYP+E RRSN RHRPIG+G+QGLAD F+ L LPFES
Sbjct: 463 DFQKLHEVTQVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGMGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ AL +S E+A + GPY+TY GSP+S+GILQ DMWN+TP+D WDW
Sbjct: 523 EEAKKLNIQIFETIYHAALTSSCEIAKELGPYQTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+SL+ I+++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 ASLKAKIAEHGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II + GS+++I IPEE K +YKTVWEI Q+T++ MAADRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIADGGSIARIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 781 ANRA----DNDVEANLAQVVCSLKNQEECMAC 808
N A D D+ A+ A + CS++N E C+ C
Sbjct: 763 TNIANEARDGDIYAD-AVLACSIENPESCVMC 793
>gi|258566183|ref|XP_002583836.1| ribonucleoside-diphosphate reductase large chain 1 [Uncinocarpus
reesii 1704]
gi|237907537|gb|EEP81938.1| ribonucleoside-diphosphate reductase large chain 1 [Uncinocarpus
reesii 1704]
Length = 884
Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/784 (65%), Positives = 633/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++ + A +++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYVNPKNNRPAPMISQKT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+MK++ L+ AI+YDRDF++ YFGFKTLERSYLL+++ +V ERPQHM+MRV+VGIH
Sbjct: 121 YEIVMKHSEELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + A++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDIEKAIETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNGSSNGI+PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGSSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+D+FEFLDLRKN GKEE RARDLF ALW PDLFM+RV +G W+LFCP++A GLA
Sbjct: 301 IEPWHSDVFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY QYE+EGR + I A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEQYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+++P+E AVCNLAS+ALP YV PV+ +
Sbjct: 421 GTIRSSNLCTEIIEYTAPDEVAVCNLASLALPTYVD----PVRGE--------------Y 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVT+++ NLNKIID NHYP+ R+SN RHRPI +G+QGLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVTQVLIRNLNKIIDGNHYPVPEARKSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ +L AS +LA DGPYETY GSP+S+GILQ DMWN+TPSD WDW
Sbjct: 523 PEARQLNTQIFETIYHASLTASCDLAKIDGPYETYEGSPVSQGILQYDMWNVTPSDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DSLKKEIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II E GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|396462063|ref|XP_003835643.1| similar to ribonucleoside-diphosphate reductase subunit large
[Leptosphaeria maculans JN3]
gi|312212194|emb|CBX92278.1| similar to ribonucleoside-diphosphate reductase subunit large
[Leptosphaeria maculans JN3]
Length = 903
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/784 (64%), Positives = 638/784 (81%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL +H DP + KV +GVY+GVTT QLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK TK FS + D+Y+Y N ++GK +++D V
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVHDLYSYVNPKNGKSQPMISDKV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+M +A L+ A++YDRDF++ +FGFKTLERSYLL+++ +V ERPQHM+MRV+VGIH
Sbjct: 121 YKIVMAHADELNSAVVYDRDFNYQFFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + A++TY MSQ +FTHA+PTLFNAGTP PQ+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 EDIEKAIETYDYMSQKYFTHASPTLFNAGTPSPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNG+SNG++PML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F FLDLRKN GKEE RARDLFYALW+PDLFM+RV+++G+W+L CP++ GLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY YE++G+ + + A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKKGKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+++P+E AVCNLAS+ALP +V D K F
Sbjct: 421 GTIRSSNLCTEIIEYTAPDEVAVCNLASLALPSFV------------------DYKRGEF 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++T NLNKII+VNHYP+E RRSN RHRPIG+G+QGLAD F+ L LPFES
Sbjct: 463 DFKKLHEVTQVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGMGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LN IFETIY+ AL +S ++A + GPYETY GSP+S+GILQ DMWN+TP+D WDW
Sbjct: 523 PEAKKLNIQIFETIYHAALTSSCDIAKELGPYETYAGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+E I++ GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 AALKEKIAQYGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II E GS+++I IPEE K +YKTVWEI Q+T++ MAADRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIAEGGSIARIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEALQVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|390603430|gb|EIN12822.1| ribonucleotide reductase alpha subunit [Punctularia strigosozonata
HHB-11173 SS5]
Length = 887
Score = 1119 bits (2894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/775 (66%), Positives = 630/775 (81%), Gaps = 20/775 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV KR RKE V+FDKITAR+ KL YGL EH D V VAQKV AGVY GVTT +LD LA+
Sbjct: 3 YVFKRGERKERVQFDKITARIAKLCYGLDTEHVDAVEVAQKVIAGVYPGVTTVELDNLAS 62
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA +T HPDYA LA R+AVSNLHK TK SFS I+D+Y Y N ++G+ A +++ + Y
Sbjct: 63 ETAAYLTTKHPDYATLAARIAVSNLHKETKKSFSSVIRDLYTYVNPKNGRPAGMISKETY 122
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
+++M NA LD AIIYDRDF++++FGFKTLERSYLL+++ RV ERPQHM+MRV+VGIH +
Sbjct: 123 DVVMANADTLDSAIIYDRDFNYNFFGFKTLERSYLLRINGRVAERPQHMIMRVAVGIHGN 182
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D D AL+TY+LMS+ FTHA+PTLFNAGTP PQLSSCFL+ MKDDSIEGIYDTLK CA+I
Sbjct: 183 DIDRALETYNLMSERCFTHASPTLFNAGTPHPQLSSCFLVAMKDDSIEGIYDTLKNCAMI 242
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK+AGGIGL IHNIRA+GSYI GTNG SNGIVPML+ ++ TARYVDQGG KR GAFAIYL
Sbjct: 243 SKTAGGIGLHIHNIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+FEF+DLRKN GKEE RARDLFYALWVPDLFM+RV +G+WSLFCP++A GL +
Sbjct: 303 EPWHADVFEFIDLRKNHGKEEVRARDLFYALWVPDLFMKRVEANGEWSLFCPNEAPGLHE 362
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EF+ LY +YE+EGRA+ I A+KLW+ I+ +QIETG P+ML+KD+ N KSNQQNLG
Sbjct: 363 VWGEEFDKLYEKYEKEGRARKTIPAQKLWYAIMEAQIETGGPFMLYKDAANSKSNQQNLG 422
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+E+SSP+ETAVCNLASIALP +V KN ++D
Sbjct: 423 TIKSSNLCTEIMEYSSPDETAVCNLASIALPTFV--------------------KNGVYD 462
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F+RL V K++T NLN+IIDVN+YP+ RRSN+RHRPIG+G+QGLADTF++L +PF+SP
Sbjct: 463 FKRLHAVAKVVTFNLNRIIDVNYYPVPEARRSNIRHRPIGVGVQGLADTFMILRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA++LN IFETIY+ AL+AS E+A DGPYET+ GSP S+G LQ D+W +TPS WDW
Sbjct: 523 EAKELNIQIFETIYHAALEASCEIAAVDGPYETFQGSPASQGQLQFDLWGVTPSGLWDWQ 582
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
SL++ I + G+RNSLL+APMPTASTSQILG NECFEPYTSNIYTRRVL+GEF VV LL
Sbjct: 583 SLKDKIMQTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
++L +L LW+ +K II NGS+ I+ IP+++KAIYKTVWEI QK ++DMAADRG +I
Sbjct: 643 RELVDLKLWNDQMKNMIIANNGSIQSIAGIPDDIKAIYKTVWEISQKKVLDMAADRGAFI 702
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
QSQSLN+H++ P G+LTS+HFY W KG+KTGMYYLRTR AA AI+FTVD +VL
Sbjct: 703 CQSQSLNVHLQSPTMGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQTVL 757
>gi|83769274|dbj|BAE59411.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 794
Score = 1118 bits (2893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/810 (63%), Positives = 642/810 (79%), Gaps = 20/810 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++ K A +++ +
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYINPKNKKPAPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+MK+A L+ AI+YDRDF++++FGFKTLERSYLL++D +V ERPQH+LMRVSVGIH
Sbjct: 121 YEIVMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRIDGKVAERPQHLLMRVSVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + A++TYHLMSQ +FTHA+PTLFNAGTPQPQL+SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 NDIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLFYALW PDLFM+RV +G W+LFCP++A GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EGR + I A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYERYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+++P+E AVCNLAS+ALP +V D+ +
Sbjct: 421 GTIRSSNLCTEIIEYTAPDEVAVCNLASLALPTFV------------------DAARGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EV +++ NLNKIID+N+YP+ + SN+RHRPI +G+ GLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDINYYPVPEAKNSNMRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ AL AS++LA G YE+Y GSP+S+GILQ DMW+ TP+D WDW
Sbjct: 523 PEAKQLNTQIFETIYHGALTASSDLAKDFGTYESYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DALKAKIAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II E GSV I IP ++KA+YKTVWEI Q++++ MAADRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPADIKALYKTVWEISQRSILQMAADRGAY 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEALKVAD 762
Query: 781 AN--RADNDVEANLAQVVCSLKNQEECMAC 808
N RA+ + CS++N+E C+ C
Sbjct: 763 TNVARANASFRKRAKVLQCSIENKEACLMC 792
>gi|358387135|gb|EHK24730.1| hypothetical protein TRIVIDRAFT_61504 [Trichoderma virens Gv29-8]
Length = 903
Score = 1118 bits (2893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/776 (66%), Positives = 626/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGR+E V+FDKITAR+ +L YGL +H DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVRKRDGRQERVQFDKITARVSRLCYGLDTDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S + D+Y+Y N ++ + + +++ D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNSRASPMISKDT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ LD AI+YDRDF++ YFGFKTLERSYLLK+D ++VERPQHM+MRV+VGI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + L+TYHLMS +FTHA+PTLFNAGTPQ QLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 DDIERVLETYHLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL++H IRA+GSYI GTNG+SNGI+PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV + W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNLDWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EGR + I A+KLW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEKEGRGRKTIRAQKLWYSILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ +P+E AVCNLAS+ALP YV D +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPAYV------------------DYNEGCY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTK++ NLNKIIDVNHYP++ R SN+RHRPIG+G+QGLAD F+ L +PFES
Sbjct: 463 DFKKLHEVTKVVVRNLNKIIDVNHYPVQEARNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNK IFETIY+ AL+AS E+A +GPY+++ GSP S+GILQ DMW++ PSD W+W
Sbjct: 523 PEARELNKQIFETIYHAALEASMEIAKVEGPYQSFKGSPASEGILQFDMWDVKPSDLWEW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+E I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DSLKEQIKEHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL + GLWS A+K +II ENGS+ I IPE++KA+YKTVWEI Q+ +V MAADRG +
Sbjct: 643 LKDLVDTGLWSDAMKNRIIAENGSIQNIPNIPEDIKALYKTVWEISQRQIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM+ P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAAPIQFTVDQEAL 758
>gi|395217261|ref|ZP_10401556.1| ribonucleoside diphosphate reductase subunit alpha [Pontibacter sp.
BAB1700]
gi|394455058|gb|EJF09608.1| ribonucleoside diphosphate reductase subunit alpha [Pontibacter sp.
BAB1700]
Length = 763
Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/787 (66%), Positives = 637/787 (80%), Gaps = 33/787 (4%)
Query: 32 EHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITK 91
++ P+ VA+KV G+Y GV+T +LD LAAETAA++T HPDYA+LA RVA+S+LHK+T
Sbjct: 2 DYVSPIEVAKKVIDGIYDGVSTIELDNLAAETAASLTTKHPDYAVLAARVAISSLHKVTS 61
Query: 92 NSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTL 151
SFS T+K +Y Y + ++G+ ASL+A DVYEII K+AA LD IIYDRD+++DYFG+KTL
Sbjct: 62 KSFSNTMKRLYTYEDPKTGENASLLAKDVYEIIRKHAATLDSTIIYDRDYNYDYFGYKTL 121
Query: 152 ERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTP 211
ERSYLL++D ++VERPQHMLMRV+VGIHK+D +SA++TY+LMS+ WFTHATPTLFNAGTP
Sbjct: 122 ERSYLLRLDGKIVERPQHMLMRVAVGIHKEDIESAIETYNLMSEKWFTHATPTLFNAGTP 181
Query: 212 QPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNG 271
+PQLSSCFLL M+DDSI GIYDTLK+CA IS+SAGGIGLSIHN+RA+GSYI GTNG+SNG
Sbjct: 182 KPQLSSCFLLTMQDDSIPGIYDTLKQCAQISQSAGGIGLSIHNVRATGSYIKGTNGTSNG 241
Query: 272 IVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYA 331
I+PML+VFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDL+KN GKEE RARDLFYA
Sbjct: 242 IIPMLKVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLKKNHGKEENRARDLFYA 301
Query: 332 LWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWF 391
LW PDLFM+RV +G WSLFCP++A GL DSWG +FE LY +YE EGRA+ + A+ LWF
Sbjct: 302 LWTPDLFMKRVEQNGDWSLFCPNEAPGLGDSWGQDFERLYEKYEREGRARKTVKAQDLWF 361
Query: 392 EILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIAL 451
+L SQIETGTPYML+KD+ N KSNQQNLGTIKSSNLCTEI+E++S +E AVCNLAS+AL
Sbjct: 362 AVLESQIETGTPYMLYKDAANSKSNQQNLGTIKSSNLCTEIMEYTSQDEVAVCNLASLAL 421
Query: 452 PRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTR 511
PRY++E+G ++ FD ++L +VT +T+NLNK+ID+N+YP+ R
Sbjct: 422 PRYIKEEG----------------GHKTFDHQKLFDVTYHVTKNLNKVIDINYYPVPEAR 465
Query: 512 RSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGP 571
SN+RHRPIG+G+QGLADTFI L +PFES EA+ LNKDIFETIY+ A+ AS +LA KDG
Sbjct: 466 NSNMRHRPIGLGVQGLADTFIALRMPFESDEARGLNKDIFETIYFAAMTASKDLAKKDGA 525
Query: 572 YETYFGSPMSKGILQVDMWNITP-SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQIL 630
YET+ GSP+S+G Q DMW +TP S RWDW LR+ + K+GVRNSLLVAPMPTAST+QIL
Sbjct: 526 YETFKGSPLSEGKFQFDMWGVTPDSGRWDWEELRQEVVKHGVRNSLLVAPMPTASTAQIL 585
Query: 631 GNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISE 690
GNNE FEPYTSNIY RRVLSGEF+VVNKHLLKDL LGLW+ +K II NGSV I
Sbjct: 586 GNNESFEPYTSNIYVRRVLSGEFMVVNKHLLKDLISLGLWNDRMKNAIIAANGSVQDIPS 645
Query: 691 IPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKG 750
IP+ +K +YKTVWEI Q+T++DM+ADRG YI QSQSLN+H+ + GKLTS+HF+AW KG
Sbjct: 646 IPQNIKDLYKTVWEISQRTVIDMSADRGAYICQSQSLNLHVMNVNFGKLTSMHFHAWKKG 705
Query: 751 MKTGMYYLRTRAAADAIKFTVDTS-------VLNNEKANRADNDVEANLAQVVCSLKNQE 803
+KTGMYYLRT+AA DAIKFTV+ V N++ NR+D + CSL N +
Sbjct: 706 LKTGMYYLRTKAAVDAIKFTVEKQAAETLEPVYNSQDQNRSD---------MSCSLDNPD 756
Query: 804 ECMACGS 810
C ACGS
Sbjct: 757 ACEACGS 763
>gi|452004087|gb|EMD96543.1| hypothetical protein COCHEDRAFT_1220161 [Cochliobolus
heterostrophus C5]
Length = 897
Score = 1117 bits (2889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/784 (64%), Positives = 634/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL +H DP + KV +GVY+GV TTQLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYQGVNTTQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK TK FS + D+YNY N ++GK +++D V
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVADLYNYVNPKNGKHQPMISDSV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I +A L+ AI+YDRDF++ +FGFKTLERSYLL++D +V ERPQHMLMRV+VGIH
Sbjct: 121 YKVIQDHAEELNSAIVYDRDFNYQFFGFKTLERSYLLRIDGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + A++TY MSQ +FTHA+PTLFNAGTP PQ+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 EDIEKAIETYDYMSQKYFTHASPTLFNAGTPSPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNG+SNG++PML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F FLDLRKN GKEE RARDLFYALW+PDLFM+RV+++G+W+L CP++ GLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY YE++ + + + A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKQNKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+++P+E AVCNLAS+ALP +V D K F
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASLALPSFV------------------DYKRGEF 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++T NLNKII+VNHYP+E RRSN RHRPIG+G+QGLAD F+ L LPFES
Sbjct: 463 DFQKLHEVTQVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGMGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ AL +S ++A + GPYETY GSP+S+GILQ DMWN+TP+D WDW
Sbjct: 523 AEAKKLNIQIFETIYHAALTSSCDIAKELGPYETYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+ I+++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 AELKAKIAQHGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II E GS+++I IPEE K +YKTVWEI Q+T++ MAADRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIAEGGSIARIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEALKVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|400598307|gb|EJP66024.1| ribonucleoside-diphosphate reductase large chain [Beauveria
bassiana ARSEF 2860]
Length = 906
Score = 1117 bits (2889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/776 (65%), Positives = 624/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGR+E V+FDKITAR+ +L YGL EH DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDTEHVDPVAITQKVISGVYGGVTTIQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S I D+Y+Y N R+ + + ++A
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVISDLYHYVNPRNDRASPMIAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ LD AI+YDRDF++ YFGFKTLERSYLLK++ ++VERPQHM+MRV+VGI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ + ++TY+LMS +FTHA+PTLFNAGTPQ QLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 DNIERVIQTYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKSCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL++H IRA+GSYI GTNG+SNGI+PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G+W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EG+ + + A+KLW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYEREGKGRKTVKAQKLWYSILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ +P+ETAVCNLAS+ALP YV D ++
Sbjct: 421 GTIRSSNLCTEIIEYCAPDETAVCNLASLALPAYV------------------DYNQGVY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT ++ NLN+IIDVNHYPI R SN+RHRPIG+G+QGLAD F+ L +PFES
Sbjct: 463 DFKKLHEVTMVVVRNLNRIIDVNHYPIPEARNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNK IFETIY+ AL AS ELA ++GPYE++ GSP S+GILQ DMWN+ PSD W+W
Sbjct: 523 PEARELNKQIFETIYHAALTASVELAKEEGPYESFKGSPASEGILQHDMWNVKPSDLWEW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LRE + ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DELREQVKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS A+K +II ENGS+ I IP ++KA+YKTVWEI Q+ ++ MAADRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPADIKALYKTVWEISQRQVIQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMRDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEAL 758
>gi|225683656|gb|EEH21940.1| ribonucleoside-diphosphate reductase large chain [Paracoccidioides
brasiliensis Pb03]
Length = 797
Score = 1117 bits (2889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/813 (63%), Positives = 640/813 (78%), Gaps = 23/813 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y+N ++G+ A +++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNGRPAPMISQST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+M++A + AI+YDRDF++ YFGFKTLERSYLL+++ +V ERPQHM+MRV++GIH
Sbjct: 121 YEIVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IR +GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDLRKN GKEE RARDLF ALW PDLFM+RV +G+W+LFCP++A GLA
Sbjct: 301 LEPWHMDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EGR K I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ SP+E AVCNLASIALP +V D+ +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFV------------------DAVRGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVT+++ NLN+IID N+YP+E +RSN RHRPI G+QGLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVTQVVVRNLNRIIDRNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ L AS ELA DGPY +Y GSP+S+GILQ DMW +TP+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHACLTASCELAKVDGPYSSYEGSPVSQGILQYDMWGVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN L
Sbjct: 583 DSLKQEIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II + GS+ I IP+++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL---- 776
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 777 -NNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
N + N A A A S++N E C+ C
Sbjct: 763 TNVARVNGAMKKRAAVSASYTSSIENPESCLMC 795
>gi|348534733|ref|XP_003454856.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Oreochromis niloticus]
Length = 793
Score = 1117 bits (2889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/812 (63%), Positives = 650/812 (80%), Gaps = 21/812 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGR+E V FDKIT+R++KL YGL+ E DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVVKRDGRQERVMFDKITSRIQKLCYGLNMEFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA +T +PDYA+LA R+AVSNLHK TK FS+ ++D+YNY N + + + +V+ D
Sbjct: 61 AEIAATLTTKYPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPLNKRHSPMVSKDT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF +++FGFKTLERSYLLK++ +V ERPQHMLMRV+VGIH
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK CA+
Sbjct: 181 TDIEAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKHCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IR++GSYI GTNG SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRSTGSYIAGTNGCSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+F+FL+L+KN GKEE RARDLFYALW+PDLFM+RV ++ WSL CP+D GL
Sbjct: 301 LEPWHFDVFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVENNEDWSLMCPADCPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY++YE EGR K V+ A++LW+ I+ SQ ETGTPYM++KD+CNRKSNQQNL
Sbjct: 361 ECWGEEFEELYTRYEREGRVKRVVKAQQLWYAIIESQTETGTPYMVYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLASIAL YV + R +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPERTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LA VTK+I NLNK+ID+N+YP+E RRSN+RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAYVTKVIVRNLNKVIDINYYPVEEARRSNMRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LN IFETIYY AL+AS ELA + G YETY GSP+SKGILQ DMW TP+D WDW
Sbjct: 522 PEAQLLNIQIFETIYYAALEASCELAAELGTYETYEGSPVSKGILQYDMWEKTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K ++I NGS+ I+EIP++LK +YKTVWEI QKT++ MAADRG Y
Sbjct: 642 LKDLTERGLWNEEMKNQLIAHNGSIQNINEIPDDLKQLYKTVWEISQKTVLKMAADRGAY 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN-E 779
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRT+ AA+ I+FT++ L +
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLKEAQ 761
Query: 780 KANRADNDV-EANLAQVVCSLKNQEECMACGS 810
A ++ ++ E N A +VCSL+N++EC+ CGS
Sbjct: 762 PATSSEQEIKERNKAAMVCSLENKDECLMCGS 793
>gi|443684165|gb|ELT88174.1| hypothetical protein CAPTEDRAFT_228855 [Capitella teleta]
Length = 790
Score = 1117 bits (2888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/808 (64%), Positives = 645/808 (79%), Gaps = 20/808 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V FDKIT+R+ KL Y L+ + DP + K G+Y GVTT +LD LA
Sbjct: 1 MFVQKRDGREEAVHFDKITSRISKLCYHLNSDFVDPAQITMKCINGLYPGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FSE + D+Y Y N ++ + +++ ++
Sbjct: 61 AETAATMTVKHPDYAILAARIAVSNLHKETKKVFSEVMNDLYTYVNPKNDIHSPMISKEL 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ +NA L+ AIIYDRD+ ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIH
Sbjct: 121 LDIVTENADRLNSAIIYDRDYSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D A++TY+L+S+ WFTHA+PTLFNAGT +PQ+SSCFLL M DSIEGIYDTLK+CA+
Sbjct: 181 RDLDRAIETYNLLSEKWFTHASPTLFNAGTNRPQMSSCFLLTMAGDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA+GS+I GTNG+SNG++PML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGLNVHCIRATGSFISGTNGTSNGLLPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F+FLD RKN GKEE RARDLFYALW+PDLFM+RV +G WSL CP ++ GL+
Sbjct: 301 LEPWHADVFDFLDCRKNTGKEEQRARDLFYALWIPDLFMKRVEQNGDWSLMCPHESPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY +YE+EGR + I A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 DVWGEEFEALYEKYEKEGRVRKTIKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+S+P+E AVCNLASIAL R+V+ ++ F
Sbjct: 421 GTIKCSNLCTEIVEYSAPDEVAVCNLASIALNRFVKS-------------------DKTF 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT +I NLNKIIDVN YP+ R+SN+RHRPIGIG+QGLADTFIL+ PF+S
Sbjct: 462 DFDKLIEVTGVIVRNLNKIIDVNFYPVPEARKSNMRHRPIGIGVQGLADTFILMRFPFDS 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ+LN+DIFETIYY ALK S +LA ++G Y+TY G P+SKGILQ DMW++ +DR DW
Sbjct: 522 PEAQKLNRDIFETIYYGALKMSCQLAQEEGAYQTYAGCPVSKGILQHDMWDVK-ADRHDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LR I K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 DGLRADIKKHGVRNSLLMAPMPTASTAQILGNNESTEPYTSNIYTRRVLSGEFQVVNHHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K ++I NGS+ +I IP++LKA+YKTVWEIKQK +++MAA+RG +
Sbjct: 641 LKDLTENGLWNDDMKNRMISSNGSIQEIEGIPDDLKALYKTVWEIKQKVVLNMAAERGAF 700
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++G+LTS+HFYAW G+KTGMYYLRT+ AA AI+FTVD S L +
Sbjct: 701 IDQSQSLNIHIAEPNYGRLTSMHFYAWKLGLKTGMYYLRTKPAAQAIQFTVDKSKLKKKT 760
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMAC 808
E N+A +VCSL N++EC+ C
Sbjct: 761 PTGESKKSEENMAAMVCSLDNKDECIMC 788
>gi|296827688|ref|XP_002851208.1| ribonucleoside-diphosphate reductase large subunit [Arthroderma
otae CBS 113480]
gi|238838762|gb|EEQ28424.1| ribonucleoside-diphosphate reductase large subunit [Arthroderma
otae CBS 113480]
Length = 874
Score = 1117 bits (2888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/776 (65%), Positives = 629/776 (81%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + Q+V +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++G+ A ++++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYVNPKNGRPAPMISEKT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
EI+MK+A L+ AI+YDRDF++ YFGFKTLERSYLL+ + +V ERPQHM+MRV+VGIH
Sbjct: 121 REIVMKHAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + +++Y+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 EDVEKVIESYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLF ALW PDLFM+RV +G+W+LFCP++A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EGR + I A+KLW+ IL +Q ETG P+ML+KDSCNRKSNQ+NL
Sbjct: 361 DVYGEEFEALYEKYEKEGRGRTTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+++P+E AVCNLASIALP +V D+ +
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASIALPTFV------------------DAVRGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVT+++ +NLN+IID NHYP+E RRSN RHRPI +G+QGLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVTQVVVKNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+ LN IFET+Y+ AL AS ELA DGPY +Y GSP+S+GILQ DMWN+TP+D WDW
Sbjct: 523 PEAKLLNIQIFETLYHAALTASCELAKADGPYSSYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+ ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DALKTEISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II + GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQL 758
>gi|302689939|ref|XP_003034649.1| hypothetical protein SCHCODRAFT_75631 [Schizophyllum commune H4-8]
gi|300108344|gb|EFI99746.1| hypothetical protein SCHCODRAFT_75631 [Schizophyllum commune H4-8]
Length = 892
Score = 1116 bits (2887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/797 (63%), Positives = 643/797 (80%), Gaps = 22/797 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV KR RKE ++ KI +R+KKL YGL H DP+ + KV GVY GVTT +LD LAA
Sbjct: 5 YVFKRGTRKEQIQLGKIQSRIKKLCYGLDMRHVDPLAITIKVVQGVYHGVTTVELDNLAA 64
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA +T HPDYA+LA R+A+SNLHK T SFS+ ++ +YNY N ++GK+AS+++D Y
Sbjct: 65 ETAAYLTTQHPDYAVLAARIAISNLHKETTKSFSQVVEKLYNYVNPKNGKRASMISDATY 124
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
+++M NA LD AIIYDRDF ++YFGFKTLERSYLL+++ RV ERPQHM+MRV+VGIH D
Sbjct: 125 KVVMDNAETLDSAIIYDRDFAYNYFGFKTLERSYLLRINGRVAERPQHMIMRVAVGIHGD 184
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
+ + L+TY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+I
Sbjct: 185 NIERVLETYNLMSDRYFTHASPTLFNAGTPHPQMSSCFLVSMKDDSIEGIYDTLKQCAMI 244
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK+AGGIGL+IHNIRA+GSYI GTNG SNGIVPML+ ++ TARYVDQGG KR GAFAIYL
Sbjct: 245 SKTAGGIGLNIHNIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYL 304
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWH D+FEFLDLRKN GKEE RARDLFYALW+PDLFM+RV G WSLFCP++A GLAD
Sbjct: 305 EPWHPDVFEFLDLRKNHGKEEQRARDLFYALWIPDLFMKRVESGGDWSLFCPNEAPGLAD 364
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EFE LY++YE EGR + I A+KLW+ IL +QIETG P+ML+KDS NRKSNQQNLG
Sbjct: 365 CWGDEFEALYAKYEAEGRERKKIPAQKLWYAILEAQIETGNPFMLYKDSANRKSNQQNLG 424
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+E+S+P+ETAVCNLAS+ALP ++R+ ++D
Sbjct: 425 TIKSSNLCTEIIEYSAPDETAVCNLASLALPTFIRDG--------------------VYD 464
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L +VTK++T NLNKIIDVN+YP+ RRSN+RHRPIG+G+QGLAD F+ L +PF+SP
Sbjct: 465 FQKLHDVTKVVTRNLNKIIDVNYYPVPEARRSNMRHRPIGLGVQGLADAFMALRMPFDSP 524
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA++LNK IFETIY+ A +AS++LA ++GPYET+ GSP S+G LQ D+W +TPSD WDW+
Sbjct: 525 EARELNKQIFETIYHAACEASSDLAEEEGPYETWEGSPASQGQLQFDLWGVTPSDLWDWA 584
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
SL+ I++ G+RN+LLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL+GEF VV LL
Sbjct: 585 SLKAKIARTGMRNALLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 644
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
++L + GLW +K +II NGS+ I+ IP+++KAIYKTVWEI QK ++D+AADRG +I
Sbjct: 645 RELVDKGLWDDKMKNQIIANNGSIQSIARIPDDIKAIYKTVWEISQKKVLDLAADRGPFI 704
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
QSQSLN+H+ P G+LTS+HFY W KG+KTGMYYLRTR A+ AI+FTVD ++L +++
Sbjct: 705 CQSQSLNVHLAAPTLGQLTSMHFYGWKKGLKTGMYYLRTRPASQAIQFTVDQAML--KES 762
Query: 782 NRADNDVEANLAQVVCS 798
N+A+ +V A+ V +
Sbjct: 763 NKAEGEVAGAPARPVVA 779
>gi|451855061|gb|EMD68353.1| hypothetical protein COCSADRAFT_33284 [Cochliobolus sativus ND90Pr]
Length = 897
Score = 1116 bits (2887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/784 (64%), Positives = 634/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL +H DP + KV +GVY+GV TTQLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYQGVNTTQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK TK FS + D+YNY N ++GK +++D V
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVADLYNYVNPKNGKHQPMISDFV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II +A L+ AI+YDRDF++ +FGFKTLERSYLL++D +V ERPQHMLMRV+VGIH
Sbjct: 121 YKIIQDHAEELNSAIVYDRDFNYQFFGFKTLERSYLLRIDGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + A++TY MSQ +FTHA+PTLFNAGTP PQ+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 EDIEKAIETYDYMSQKYFTHASPTLFNAGTPSPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNG+SNG++PML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F FLDLRKN GKEE RARDLFYALW+PDLFM+RV+++G+W+L CP++ GLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY YE++ + + + A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKQNKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+++P+E AVCNLAS+ALP +V D K F
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASLALPSFV------------------DYKRGEF 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++T NLNKII+VNHYP+E RRSN RHRPIG+G+QGLAD F+ L LPFES
Sbjct: 463 DFQKLHEVTQVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGMGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ AL +S ++A + GPYETY GSP+S+GILQ DMWN+TP+D WDW
Sbjct: 523 AEAKKLNIQIFETIYHAALTSSCDIAKELGPYETYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+ I+++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 AELKAKIAQHGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II E GS+++I IPEE K +YKTVWEI Q+T++ MAADRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIAEGGSIARIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEALKVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|302307390|ref|NP_984039.2| ADL057Wp [Ashbya gossypii ATCC 10895]
gi|299788978|gb|AAS51863.2| ADL057Wp [Ashbya gossypii ATCC 10895]
gi|374107252|gb|AEY96160.1| FADL057Wp [Ashbya gossypii FDAG1]
Length = 890
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/785 (63%), Positives = 639/785 (81%), Gaps = 14/785 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPV+FDKITAR+ +L YGL +H D V + Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVKFDKITARISRLCYGLDPKHVDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ + D+Y+Y N ++G + +++D+V
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSQVVSDLYHYTNPKNGLHSPMISDEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+M + L+ AI+YDRDF ++YFGFKTLERSYLL++D +V ERPQHM+MRV+VGIH
Sbjct: 121 YEIVMAHKDELNSAIVYDRDFQYNYFGFKTLERSYLLRIDGKVAERPQHMVMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D A++TY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 KDIKKAIETYNLMSMRYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNGI+PM++V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMVRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+F+F+D+RKN GKEE RARDLF ALWVPDLFM RV+++G W+LF PS+A GL+
Sbjct: 301 LEPWHSDVFDFIDIRKNHGKEEIRARDLFPALWVPDLFMRRVQENGDWTLFSPSEAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY +Y EGR + I A+KLW+ IL +Q ETGTP++L+KD+CNRKSNQ+NL
Sbjct: 361 DVWGEEFEELYERYVREGRGRKTIKAQKLWYAILEAQTETGTPFILYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+SSPEETAVCNLASIALP ++ E D K + +
Sbjct: 421 GTIKSSNLCCEIVEYSSPEETAVCNLASIALPAFIAEAA--------------DGKTQWY 466
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L E+ K++T NLN++ID N+YP+ET +RSN+RHRPI +G+QGLAD F++L +PF+S
Sbjct: 467 DFDKLHEIAKVVTRNLNRVIDRNYYPVETAKRSNMRHRPIALGVQGLADAFMILRIPFDS 526
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
P+A++LN IFET+Y+ A +AS ELA+++GPYE++ GSP S+GILQ DMWN PS WDW
Sbjct: 527 PQAKELNSQIFETLYHAACEASMELAIEEGPYESFKGSPASQGILQFDMWNHKPSGMWDW 586
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+ I ++G+RNSLL+APMPTASTSQILG NECFEPYTSN+Y+RRVLSGEF +VN +L
Sbjct: 587 DALKAKIIEHGMRNSLLLAPMPTASTSQILGYNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W ++K+ II +NGS+ + IP+ELK +YKTVWE+ QKT++DMAADRG +
Sbjct: 647 LRDLVDLGIWDDSMKSHIISDNGSIQGLPNIPQELKDLYKTVWELSQKTIIDMAADRGAF 706
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
+DQSQSLNIH+ P G+LTS+HFY W KG+KTGMYYLRT+AA+ AI+FTVD +V
Sbjct: 707 VDQSQSLNIHIRAPTMGRLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTVDKAVAEQAA 766
Query: 781 ANRAD 785
N AD
Sbjct: 767 NNVAD 771
>gi|358058031|dbj|GAA96276.1| hypothetical protein E5Q_02942 [Mixia osmundae IAM 14324]
Length = 980
Score = 1115 bits (2885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/781 (64%), Positives = 635/781 (81%), Gaps = 19/781 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KRDGR+E V FDKITAR+ KL YGL +P+ + +KV +GVY+GVTT +LD LA
Sbjct: 109 MVVFKRDGRREQVAFDKITARINKLCYGLDTNFVEPIEITKKVISGVYQGVTTVELDNLA 168
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+A+SNLHK TK +FS ++D+Y + N ++ K + +++D+
Sbjct: 169 AETAAYMTTRHPDYAILAARIAISNLHKETKKTFSSVVEDLYRWVNPKNNKASPMISDET 228
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ +M+NA L+ A+IYDRDF+++YFGFKTLERSYLL+++ +V ERPQHMLMRV+VGIH
Sbjct: 229 YKAVMENADVLNSAVIYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 288
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+ + +++Y+LMS+ +FTHA+PTLFNAGTP PQLSSCFL+CMKDDSI+GIYDTLK CA+
Sbjct: 289 SNIEKVVESYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIDGIYDTLKTCAM 348
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IHNIRA+GSYI GTNG SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 349 ISKTAGGIGLNIHNIRATGSYIAGTNGYSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 408
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHAD+F+FLDLRKN GKEE RARDLFYALW+PD+FM RV +G W LFCP++A GLA
Sbjct: 409 IEPWHADVFDFLDLRKNHGKEEVRARDLFYALWIPDMFMRRVEQNGDWPLFCPAEAPGLA 468
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ +G EF+ L+ +YE+EGRAK I A+KLW+ IL SQ+ETG P+ML+KD+ N KSNQ+NL
Sbjct: 469 EVYGKEFDALFEKYEKEGRAKKTIKAQKLWYAILESQVETGNPFMLYKDAANSKSNQKNL 528
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+S+P+E AVCNLASIALP +V KG +
Sbjct: 529 GTIKSSNLCTEIIEYSAPDEVAVCNLASIALPTFVTGKGT-------------------Y 569
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +VTK++T NLN+IIDVN+YP+ R SN+RHRPIGIG+QGLAD F+ L LPF+S
Sbjct: 570 DFQKLHDVTKVVTRNLNRIIDVNYYPVIEARNSNMRHRPIGIGVQGLADAFMALRLPFDS 629
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
P A++LN IFETIY+ +L+AS+++A DGPY TY GSP+SKG LQ DMW TP+D WDW
Sbjct: 630 PAAKKLNIQIFETIYHASLEASSDIAAVDGPYSTYEGSPISKGELQFDMWGKTPTDLWDW 689
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SLRE I+K G RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN L
Sbjct: 690 DSLREKIAKTGTRNSLLMAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 749
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL ELGLW LK +II NGS++ I+ IP++LKAIY+TVWEI QK+++DM+ADRG Y
Sbjct: 750 LRDLVELGLWDDELKNRIIAHNGSIANINGIPQDLKAIYRTVWEISQKSIIDMSADRGAY 809
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH++ P +LTS++FY W KG+KTGMYYLRT+AAA AI+FTV ++ + K
Sbjct: 810 IDQSQSLNIHLQSPTFAQLTSMNFYGWKKGLKTGMYYLRTKAAASAIQFTVSQALQDEVK 869
Query: 781 A 781
A
Sbjct: 870 A 870
>gi|326469969|gb|EGD93978.1| ribonucleoside-diphosphate reductase large subunit [Trichophyton
tonsurans CBS 112818]
gi|326484125|gb|EGE08135.1| ribonucleoside-diphosphate reductase large subunit [Trichophyton
equinum CBS 127.97]
Length = 875
Score = 1115 bits (2885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/776 (65%), Positives = 626/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + Q+V +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++G+ A ++++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYVNPKNGRPAPMISEKT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
EI+MK+A L+ AI+YDRDF++ YFGFKTLERSYLL+ + +V ERPQHM+MRV+VGIH
Sbjct: 121 REIVMKHAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + ++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 EDVEKVIETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW PDLFM+RV +G W+LFCP++A GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EGR + I A+KLW+ IL +Q ETG P+ML+KDSCNRKSNQ+NL
Sbjct: 361 DVYGEEFEALYEKYEKEGRGRTTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+++P+E AVCNLASIALP +V D+ +
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASIALPTFV------------------DAVRGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVT+++ NLN+IID NHYP+E RRSN RHRPI +G+QGLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVTQVVVRNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+ LN IFET+Y+ AL AS ELA DGPY +Y GSP+S+GILQ DMWN+TP+D WDW
Sbjct: 523 PEAKLLNTQIFETLYHAALTASCELAKVDGPYSSYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+ ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DGLKAEISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II + GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQL 758
>gi|119188101|ref|XP_001244657.1| hypothetical protein CIMG_04098 [Coccidioides immitis RS]
Length = 893
Score = 1115 bits (2884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/782 (65%), Positives = 630/782 (80%), Gaps = 18/782 (2%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LAAETAA
Sbjct: 23 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTIELDNLAAETAAY 82
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++ + A +++ YEI+MK
Sbjct: 83 MTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYINPKNNRPAPMISQKTYEIVMK 142
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSA 186
++A L+ AI+YDRDF++ YFGFKTLERSYLL+++ +V ERPQHM+MRV+VGIH +D + A
Sbjct: 143 HSAELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHGEDIEKA 202
Query: 187 LKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAG 246
++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+ISK+AG
Sbjct: 203 IETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAG 262
Query: 247 GIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHA 306
GIGL++H IRA+GSYI GTNGSSNGI+PML+VFN+TARYVDQGG KR GAFAIYLEPWH+
Sbjct: 263 GIGLNVHRIRATGSYIAGTNGSSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHS 322
Query: 307 DIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIE 366
DIFEFLDLRKN GKEE RARDLF ALW PDLFM+RV +G W+LFCP++A GLAD +G E
Sbjct: 323 DIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGDE 382
Query: 367 FEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSS 426
FE LY QYE+EGR + I A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NLGTI+SS
Sbjct: 383 FEALYEQYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNLGTIRSS 442
Query: 427 NLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLA 486
NLCTEI+E++SP+E AVCNLAS+ALP YV PV+ +DF +L
Sbjct: 443 NLCTEIIEYTSPDEVAVCNLASLALPTYVD----PVRGE--------------YDFGKLH 484
Query: 487 EVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQL 546
EVT+++ NLNKIID NHYP+ R+SN RHRPI +G+QGLAD F+ L LPF+SPEA+QL
Sbjct: 485 EVTQVLVRNLNKIIDGNHYPVPEARKSNFRHRPIAVGVQGLADAFLALRLPFDSPEARQL 544
Query: 547 NKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREM 606
N IFETIY+ AL AS ++A DGPYETY GSP+S+GILQ DMWN+TP+D WDW SL+
Sbjct: 545 NIQIFETIYHAALTASCDIAKVDGPYETYEGSPVSQGILQYDMWNVTPTDLWDWDSLKRD 604
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTE 666
I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN LLKDL +
Sbjct: 605 IAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 664
Query: 667 LGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQS 726
LGLWS +K +II E GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG YIDQSQS
Sbjct: 665 LGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAYIDQSQS 724
Query: 727 LNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADN 786
LNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L N A +
Sbjct: 725 LNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLKVADTNVARS 784
Query: 787 DV 788
V
Sbjct: 785 SV 786
>gi|242014390|ref|XP_002427874.1| Ribonucleoside-diphosphate reductase large chain, putative
[Pediculus humanus corporis]
gi|212512343|gb|EEB15136.1| Ribonucleoside-diphosphate reductase large chain, putative
[Pediculus humanus corporis]
Length = 795
Score = 1115 bits (2884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/811 (63%), Positives = 646/811 (79%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR GR E V FDKIT+R++KL YGL+ ++ DP+ + KV G+Y GVTT +LD LA
Sbjct: 4 MFVIKRGGRNEEVHFDKITSRIQKLCYGLNLDYVDPIAITVKVINGLYSGVTTAELDSLA 63
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE +A+MT HPDYA+LA R+AVSNLHK TK SFS+ + D+YN N + + +++D
Sbjct: 64 AEVSASMTTQHPDYAILAARIAVSNLHKETKVSFSDVMTDLYNMKNSFNQQPTPMLSDYH 123
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II+K+A L+ AIIY+RD++++YFGFKTLERSYLLK++ +VVERPQHMLMRV+VG+H
Sbjct: 124 YDIIIKHADELNAAIIYERDYNYNYFGFKTLERSYLLKINGKVVERPQHMLMRVAVGLHG 183
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD SA++TY+L+S+ +FTHA+PTLF+A T +PQLSSCFLL MK+DSI+GIY+TLK+CA+
Sbjct: 184 DDISSAIETYNLLSEKYFTHASPTLFSAATRKPQLSSCFLLTMKEDSIDGIYETLKQCAL 243
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG++IH IR+ G+YI GTNG SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 244 ISKSAGGIGVNIHCIRSKGTYIAGTNGISNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 303
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDL+KN GKEE RARDLFYALW+PDLFMERV + +W L CP GL+
Sbjct: 304 LEPWHADIFEFLDLKKNTGKEETRARDLFYALWIPDLFMERVEQNQEWCLMCPKTCPGLS 363
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EF LY YEE+G + A+ LW+ I+ SQ+ETGTPYML+KD+CNRKSNQQNL
Sbjct: 364 DCWGEEFNKLYLSYEEKGLYVKKVKAQSLWYAIIESQVETGTPYMLYKDACNRKSNQQNL 423
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+SSPEE AVCNLASIA+ +V+ ++ +
Sbjct: 424 GTIKCSNLCTEIVEYSSPEEIAVCNLASIAVNMFVK-------------------PDKTY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FE+L +VTKIIT+NLNK+ID+ +YP+ + SNLRHRPIGIGIQGLAD FIL+ LPF+S
Sbjct: 465 NFEKLKDVTKIITKNLNKVIDITYYPVPEAKLSNLRHRPIGIGIQGLADAFILMRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ+LN IFETIYY AL+AS+ELA GPYETY GSP SKGILQ DMW +TP++ WDW
Sbjct: 525 PEAQKLNIQIFETIYYGALEASSELAAIHGPYETYEGSPASKGILQYDMWGVTPTNLWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+ I K G+RNSLL+APMPTAST+QILGNNE FEPYT+NIYTRRVLSGEF VVN+HL
Sbjct: 585 DALKNKIKKWGIRNSLLIAPMPTASTAQILGNNESFEPYTTNIYTRRVLSGEFQVVNQHL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE+GLW+ +K II GS+ I IP+ELKA+YKTVWEI QK ++ MAADRG +
Sbjct: 645 LKDLTEIGLWNDEMKNTIIANGGSIQNIDSIPKELKALYKTVWEISQKVILKMAADRGAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ QP++GKLTS+HFYAW G+KTGMYYLRT+ AA I+FTVD + +NN
Sbjct: 705 IDQSQSLNIHIAQPNYGKLTSMHFYAWKLGLKTGMYYLRTKPAAQPIQFTVDKTKVNNAN 764
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + N+ + CSL+N+++C+ CGS
Sbjct: 765 VKEVSTEKDKFNMESISCSLQNKDDCLMCGS 795
>gi|375013327|ref|YP_004990315.1| ribonucleoside-diphosphate reductase subunit alpha [Owenweeksia
hongkongensis DSM 17368]
gi|359349251|gb|AEV33670.1| ribonucleoside-diphosphate reductase, alpha subunit [Owenweeksia
hongkongensis DSM 17368]
Length = 821
Score = 1115 bits (2883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/842 (63%), Positives = 654/842 (77%), Gaps = 53/842 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGRKE ++FDKITAR++KL YGLS E DP VA KV G+Y+GVTT++LD LA
Sbjct: 1 MYVLKRDGRKESIKFDKITARIQKLCYGLS-ELVDPTTVAMKVIEGIYEGVTTSELDSLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE +A+MT HPDYA LA R+AVSNLHK T SFSET+KD+ Y N ++G + L+ADDV
Sbjct: 60 AEVSASMTTRHPDYAQLAARIAVSNLHKNTTKSFSETMKDLKEYVNPKTGLHSPLIADDV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEII KNAA LD +IYDRDF +DYFGFKTLERSYLL+++ ++ ERPQHMLMRV++GIHK
Sbjct: 120 YEIIEKNAAHLDSTLIYDRDFGYDYFGFKTLERSYLLRVNGQIAERPQHMLMRVAIGIHK 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A++TY LMS+ +FTHATPTLFNAGTP+PQ+SSCFLL MKDDSI+GIYDTLK+C+
Sbjct: 180 EDLEAAVETYDLMSKKYFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQCSK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FLDL+KN GKEE RARDLFYALW PDLFM+RV++ G W+L P++ GL
Sbjct: 300 LEPWHADIFDFLDLKKNHGKEEMRARDLFYALWTPDLFMKRVKEGGDWTLMDPNECPGLC 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G +FE LY++YE+EG+ + + AR LW +I SQIETGTPYML+KD+ N KSNQ+NL
Sbjct: 360 DVYGEKFEELYTKYEQEGKGRKTVKARDLWGKITESQIETGTPYMLYKDAANEKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+++P+E AVCNLASIALP Y+ E F
Sbjct: 420 GTIRSSNLCTEIMEYTAPDEVAVCNLASIALPMYIEEGK--------------------F 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L +VT +T+NLN+IID N+YP+ R SN+RHRP+G+G+QGLADTFI L L F S
Sbjct: 460 DHQKLYDVTYKVTKNLNRIIDRNYYPVAEARNSNMRHRPVGLGVQGLADTFIKLRLSFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD---R 597
EA+QLNKDIFETIYY AL AS + A++DG YET+ GSP+SKG Q +MW I+ D
Sbjct: 520 DEAKQLNKDIFETIYYAALCASKDEAIQDGAYETFEGSPISKGEFQFNMWGISEDDLSGN 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW +LR+ + + GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWKALRKEVMEKGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL DL +LGLWS LK II NGS+ I IP+ LK IYKTVWE+ K ++DM+ADR
Sbjct: 640 KHLLIDLVDLGLWSEDLKNDIIRANGSIQNIDIIPDNLKEIYKTVWEMSMKDIIDMSADR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD----- 772
G +IDQSQSLN+ ME + GKLTS+HFYAW KG+KTGMYYLRT+AA+DAIKFTV
Sbjct: 700 GWFIDQSQSLNLFMENANIGKLTSMHFYAWEKGLKTGMYYLRTKAASDAIKFTVQKQSKA 759
Query: 773 --TSVLNN------------EKANRADNDVEANLAQ----------VVCSLKNQEECMAC 808
T V ++ +KAN A +A+ + CS+ N ++C AC
Sbjct: 760 EVTPVTDSKQTEKIQEKESVQKANSLGEKRVAEMAERVNNFSDEEVIACSIDNPDDCEAC 819
Query: 809 GS 810
GS
Sbjct: 820 GS 821
>gi|380488165|emb|CCF37565.1| ribonucleoside-diphosphate reductase large subunit [Colletotrichum
higginsianum]
Length = 895
Score = 1115 bits (2883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/776 (65%), Positives = 627/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V+FDKITAR+ +L YGL EH DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMEHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S + D+Y+Y N ++GK + ++A D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNGKASPMIAKDT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ +M++ LD AI+YDRDF++ YFGFKTLERSYLLK+D ++ ERPQHM+MRV+VGI
Sbjct: 121 YDAVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIAERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMS +FTHA+PTLFNAGTPQ QLSSCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL++H IRA+GSYI GTNG+SNG+VPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGVVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F+FLDLRKN GKEE RARDLF ALW+PDLFM+RV +G W+L CP++ GLA
Sbjct: 301 LEPWHADVFDFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+ G+ + + A+KLW+ IL +Q ETG P+ML+KD+ NRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEQMGKGRKTMKAQKLWYAILEAQTETGNPFMLYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ +P+E AVCNLAS+ALP +V D ++
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPTFV------------------DYNEGVY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++ NLN+IIDVNHYP++ R SN+RHRPIG+G+QGLAD F+ L +PFES
Sbjct: 463 DFQKLHEVTQVVVRNLNRIIDVNHYPVQEARNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+ LNK IFETIY+ AL S +LA ++GPY+TY GSP+S+GILQ DMWN+ PSD WDW
Sbjct: 523 PEARDLNKKIFETIYHAALTMSVQLAKEEGPYQTYEGSPVSQGILQYDMWNVKPSDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+E I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DSLKEQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS A+K +II ENGS+ I IP E+KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPTEVKALYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM+ P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEAL 758
>gi|342884077|gb|EGU84420.1| hypothetical protein FOXB_05085 [Fusarium oxysporum Fo5176]
Length = 897
Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/784 (64%), Positives = 630/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V+FDKITAR+ +L YGL +H DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S + D+Y+Y N ++G+ + +++ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNGRPSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ LD AI+YDRDF + YFGFKTLERSYLLK+D ++VERPQHM+MRVSVGI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFQYQYFGFKTLERSYLLKIDGKIVERPQHMIMRVSVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + L+TY+LMS +FTHA+PTLFNAGTPQPQLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 DDIERVLETYNLMSSKFFTHASPTLFNAGTPQPQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL++H IRA+GSYI GTNG+SNG+VPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGVVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G W+L CP++ GLA
Sbjct: 301 LEPWHSDVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EG+ + I A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEKEGKGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ +P+E AVCNLAS+ALP ++ + +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPSFI------------------NYDEACY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +V++++ NLNKIIDVNHYP++ R SN+RHRPIG+G+QGLAD F+ L +PFES
Sbjct: 463 DFKKLHKVSQVVIRNLNKIIDVNHYPVQEARNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNK IFETIY+ AL AS +LA ++GPY T+ GSP S+GILQ DMWN+ PSD WDW
Sbjct: 523 PEARELNKQIFETIYHAALTASVQLAKEEGPYSTFKGSPASEGILQFDMWNVKPSDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LRE + +G+RNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 ETLREEVKTHGIRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS A+K +II ENGS+ I IP ++KA+YKTVWEI Q+ +V MAADRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPADVKALYKTVWEISQRQVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+ P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQQALKLAD 762
Query: 781 ANRA 784
+N A
Sbjct: 763 SNSA 766
>gi|346327607|gb|EGX97203.1| ribonucleoside-diphosphate reductase large chain [Cordyceps
militaris CM01]
Length = 904
Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/776 (65%), Positives = 626/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGR+E V+FDKITAR+ +L YGL EH DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDTEHVDPVAITQKVISGVYGGVTTIQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S I D+Y+Y N R+ + + ++A
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVISDLYHYVNPRNDRASPMIAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ LD AI+YDRDF++ YFGFKTLERSYLLK++ ++VERPQHM+MRV+VGI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ + ++TY+LMS +FTHA+PTLFNAGTPQ QLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 DNIERVVQTYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKSCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+++H IRA+GSYI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGMNVHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G+W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE +G+ + I A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYELDGKGRKTIKAQKLWYSILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ +P+ETAVCNLAS+ALP YV D ++
Sbjct: 421 GTIRSSNLCTEIIEYCAPDETAVCNLASLALPAYV------------------DYNQGVY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT ++ NLN+IIDVNHYPI R SN+RHRPIG+G+QGLAD F+ L +PFES
Sbjct: 463 DFKKLHEVTMVVVRNLNRIIDVNHYPIPEARNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNK IFETIY+ AL +S ELA ++GPY+++ GSP+S+GILQ DMWN+ PSD W+W
Sbjct: 523 PEARELNKQIFETIYHAALTSSMELAKEEGPYQSFKGSPVSEGILQFDMWNVKPSDLWEW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LRE I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DELREQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS A+K +II +NGS+ I IP ++KA+YKTVWEI Q+ +V MAADRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIADNGSIQNIPNIPADIKALYKTVWEISQRQIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMRDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEAL 758
>gi|407917669|gb|EKG10973.1| Ribonucleotide reductase large subunit [Macrophomina phaseolina
MS6]
Length = 908
Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/784 (64%), Positives = 631/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH DP + QKV +GVY+GV+T +LD LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPEHVDPATITQKVISGVYQGVSTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+YNY N ++ K + +++ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSAVIADLYNYVNPKNRKHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+EI+ K+A L+ AI+YDRDF + YFGFKTLERSYLL++D +V ERPQ M+MRV+VGIH
Sbjct: 121 FEIVNKHAEELNSAIVYDRDFQYQYFGFKTLERSYLLRIDGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + A++TY+LMS +FTHA+PTLFNAGTP+PQL+SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDIEKAIETYNLMSLKYFTHASPTLFNAGTPKPQLASCFLIDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNG+SNG++PML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F FLDLRKN GKEE RARDLFYALW+PDLFM+RV +G W+L CP++ GLA
Sbjct: 301 LEPWHADVFSFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEQNGTWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY QYE+EGR + + A+KLW+ IL +Q+ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DVYGEEFEALYEQYEKEGRGRETVRAQKLWYAILEAQVETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLC EIVE+++P+E AVCNLAS+ALP +V D + ++
Sbjct: 421 GTIRSSNLCCEIVEYTAPDEVAVCNLASLALPTFV------------------DVEEGVY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++ +NLNKIID+NHYP+ R+SN+RHRPI +G+ GLAD F+ L +PF+S
Sbjct: 463 DFKKLHEVTQVLVKNLNKIIDINHYPVPEARKSNMRHRPIAVGVNGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ AL AS ELA +DGPYET+ GSP S+GILQ DMWN TP+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHAALTASVELAKRDGPYETFQGSPASQGILQYDMWNKTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+ I+++G RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DSLKAEIAQHGTRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II NGS+ +I IP+++KA+YKTVWE+ Q+T+V MAADRG +
Sbjct: 643 LKDLVDLGLWSDQMKNRIIASNGSIQQIPNIPDDIKALYKTVWELSQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+ P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALKVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|363751963|ref|XP_003646198.1| hypothetical protein Ecym_4318 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889833|gb|AET39381.1| hypothetical protein Ecym_4318 [Eremothecium cymbalariae
DBVPG#7215]
Length = 877
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/795 (63%), Positives = 649/795 (81%), Gaps = 20/795 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKE V+FDKITAR+ +L YGL +H D V + Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEQVKFDKITARISRLCYGLDPKHIDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ I D+Y+Y N ++G K+ +++D+V
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSQVISDLYHYINPKNGLKSPMISDEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+M++ L+ AI+YDRDF ++YFGFKTLERSYLL++D +V ERPQHM+MRV+VGIH
Sbjct: 121 YEIVMEHKDELNSAILYDRDFQYNYFGFKTLERSYLLRIDGQVAERPQHMVMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D A++TY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 RDIKKAIETYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNGI+PM++V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMVRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIF+F+D+RKN GKEE RARDLF ALW+PDLFM RV+D+G W+LF PS+A GL+
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMRRVQDNGDWTLFSPSEAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY +Y EGR + I A+KLW+ IL +Q ETGTP++L+KD+CNRKSNQ+N+
Sbjct: 361 EVWGDEFEELYERYVLEGRGRKTIKAQKLWYAILEAQTETGTPFILYKDACNRKSNQKNI 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+SSPEETAVCNLASIALP ++ E S D K + +
Sbjct: 421 GTIKSSNLCCEIVEYSSPEETAVCNLASIALPAFIEE--------------SSDGKTQFY 466
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L ++ K++T NLN++ID N+YP+ET RRSN+RHRPI +G+QGLAD F++L +PF+S
Sbjct: 467 NFQKLHDIAKVVTRNLNRVIDRNYYPVETARRSNMRHRPIALGVQGLADAFMILRIPFDS 526
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFET+Y+ A +AS ELA+++GPYE++ GSP+SKGILQ DMW P+D WDW
Sbjct: 527 KEAKELNIQIFETLYHAACEASVELAIEEGPYESFKGSPISKGILQFDMWGRKPTDLWDW 586
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+ I K+G RNSLL+APMPTASTSQILG NECFEPYTSN+Y+RRVLSGEF +VN +L
Sbjct: 587 QTLKAKIVKHGTRNSLLIAPMPTASTSQILGYNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W ++K+ II +NGS+ + IP+ELK +YKTVWE+ QKT++DMAADRG Y
Sbjct: 647 LRDLVDLGVWDESMKSHIISDNGSIQGLPNIPQELKDLYKTVWELSQKTIIDMAADRGAY 706
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ P G+LTS+HFY W KG+KTGMYYLRT+AA+ AI+FTVD +V
Sbjct: 707 IDQSQSLNIHIRAPTMGRLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTVDKAV----- 761
Query: 781 ANRADNDVEANLAQV 795
A +A N+V ANL+++
Sbjct: 762 AEQAANNV-ANLSKL 775
>gi|61557388|ref|NP_001013254.1| ribonucleotide reductase M1 [Rattus norvegicus]
gi|55250768|gb|AAH85906.1| Ribonucleotide reductase M1 [Rattus norvegicus]
gi|149068638|gb|EDM18190.1| ribonucleotide reductase M1 (mapped), isoform CRA_b [Rattus
norvegicus]
Length = 792
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/811 (65%), Positives = 651/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +G+ + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVASST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
EI+M + L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LEIVMAHKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+LAEVTK+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFEKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIPE+LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPEDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N+EEC+ CGS
Sbjct: 762 KALKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|426245029|ref|XP_004016318.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit [Ovis
aries]
Length = 791
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/810 (65%), Positives = 652/810 (80%), Gaps = 19/810 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D++NY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY +YE+EGR + VI A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYERYEKEGRVRKVIKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +LAEVTK+I NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFTKLAEVTKVIVRNLNKIIDINYYPVPEASLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 SLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ + E N A +VCSL+N++EC+ CGS
Sbjct: 762 KVSKEEEKERNTAAMVCSLENRDECLMCGS 791
>gi|320582719|gb|EFW96936.1| Ribonucleoside-diphosphate reductase large chain 1 [Ogataea
parapolymorpha DL-1]
Length = 862
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/772 (65%), Positives = 632/772 (81%), Gaps = 16/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGRKEPVRFDKITAR+ +L YGL EH +PV + Q+V +GVY GVTT +LD LA
Sbjct: 1 MYVLKRDGRKEPVRFDKITARVSRLCYGLDPEHVEPVAITQRVISGVYHGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA LA R+A+SNLHK T FS+ + +Y+Y N ++GK + +++D+
Sbjct: 61 AETAAYMTTIHPDYATLAARIAISNLHKQTTKQFSQVVDQLYHYINPKNGKPSPMISDET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+ ++A L+ AI+YDRDF ++YFGFKTLERSYLLK+D +V ERPQHM+MRV++GIH
Sbjct: 121 YRIVQEHADELNSAIVYDRDFSYNYFGFKTLERSYLLKIDGKVAERPQHMVMRVAIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD S ++TY+LMSQ +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSI+GIYDTLK CA+
Sbjct: 181 DDIPSVIETYNLMSQKFFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKAAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+DIF+F+D+RKN GKEE RARDLF ALW+PDLFMERV + +W+LF PS+A GLA
Sbjct: 301 VEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMERVEQNAEWTLFSPSEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY++YE+EGR + + A+KLW+ IL +Q ETGTP+ML+KD+CN K+NQ+NL
Sbjct: 361 DVYGDEFKELYTRYEKEGRGRQTVKAQKLWYAILEAQTETGTPFMLYKDACNSKTNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+SSPEE AVCNLASIALP +V D +
Sbjct: 421 GIIKSSNLCCEIVEYSSPEEVAVCNLASIALPAFVES----------------DDNTSWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FE+L ++TK++T+NLNKIID N+YP+ RRSN+R+RPI +G+QGLAD F+ L LPF+S
Sbjct: 465 NFEKLHQITKVVTKNLNKIIDRNYYPVPEARRSNMRNRPIAVGVQGLADVFMQLRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LN IFETIY+ AL+ASAELAV+DG YET+ GSP S+GILQ D+W P+D WDW
Sbjct: 525 PEARELNIQIFETIYHGALEASAELAVRDGKYETFEGSPASQGILQFDLWGKKPTDLWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+ I K+G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN +L
Sbjct: 585 DSLKARIQKDGLRNSLLVAPMPTASTSQILGYNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL LGLW+ ++K II +NGSV + +P+ELK +Y+TVWEI QK+++DMAADRG Y
Sbjct: 645 LRDLVNLGLWNDSMKNFIIKDNGSVQNLPNVPQELKDLYRTVWEIPQKSIIDMAADRGAY 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH++ P GKLTS+HFY W KG+KTGMYYLRT+AAA AI+FTVD
Sbjct: 705 IDQSQSMNIHLKNPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVD 756
>gi|389624205|ref|XP_003709756.1| ribonucleoside-diphosphate reductase large subunit [Magnaporthe
oryzae 70-15]
gi|351649285|gb|EHA57144.1| ribonucleoside-diphosphate reductase large subunit [Magnaporthe
oryzae 70-15]
gi|440467397|gb|ELQ36621.1| ribonucleoside-diphosphate reductase large chain [Magnaporthe
oryzae Y34]
gi|440486678|gb|ELQ66519.1| ribonucleoside-diphosphate reductase large chain [Magnaporthe
oryzae P131]
Length = 909
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/776 (65%), Positives = 624/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V+FDKITAR+ +L YGL EH DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDPEHVDPVAITQKVISGVYGGVTTIQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS + D+++Y N ++GK + ++A D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVVSDLFHYVNPKNGKLSPMIAQDT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ +M++ LD AI+YDRDF++ YFGFKTLERSYLLK++ ++VERPQHM+MRV+VGI
Sbjct: 121 YDCVMRHKEDLDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ + ++TY+LMS +FTHA+PTLFNAGTPQ QLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 DNIERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL++H IRA+GSYI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEIRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+ G+ + I A+KLW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEQAGKGRKTIKAQKLWYSILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLAS+ALP++V D +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPQFV------------------DYHKGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L EVT+++ NLNKII+VN+YP++ R SN+RHRPIG+G+QGLAD F+ L LPFES
Sbjct: 463 DFEKLHEVTQVVVRNLNKIIEVNYYPVQEARNSNMRHRPIGLGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+ LNK IFETIY+ AL AS +LA + GPY TY GSP+S+GILQ DMWN+ PSD WDW
Sbjct: 523 PEARDLNKKIFETIYHAALTASCKLAEEQGPYSTYEGSPVSQGILQYDMWNVKPSDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DALKANIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ELGLWS +K +II E GS+ I+ IPE+ K +YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVELGLWSDDMKNRIIAEGGSIQNIASIPEDTKKLYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMRDPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEAL 758
>gi|310798516|gb|EFQ33409.1| ribonucleotide reductase [Glomerella graminicola M1.001]
Length = 894
Score = 1112 bits (2877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/776 (65%), Positives = 626/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V+FDKITAR+ +L YGL +H DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S + D+Y+Y N ++ K + ++A D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNNKPSPMIAKDT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ +M++ LD AI+YDRDF++ YFGFKTLERSYLLK+D ++ ERPQHM+MRV+VGI
Sbjct: 121 YDAVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIAERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMS +FTHA+PTLFNAGTPQ QLSSCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL++H IRA+GSYI GTNG+SNG+VPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGVVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F+FLDLRKN GKEE RARDLF ALW+PDLFM+RV +G W+L CP++ GLA
Sbjct: 301 LEPWHADVFDFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+ G+ + I A+KLW+ IL +Q ETG P+ML+KD+ NRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEQMGKGRKTIKAQKLWYAILEAQTETGNPFMLYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ +P+E AVCNLAS+ALP +V D ++
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPTFV------------------DYNEGVY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++ NLN+IIDVNHYP++ R SN+RHRPIG+G+QGLAD F+ L +PFES
Sbjct: 463 DFQKLHEVTQVVVRNLNRIIDVNHYPVQEARNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+ LNK IFETIY+ AL S +LA ++GPYETY GSP+S+GILQ DMWN+ PSD WDW
Sbjct: 523 PEARDLNKKIFETIYHAALTMSVQLAREEGPYETYEGSPVSQGILQYDMWNVKPSDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+E I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DALKEQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS A+K +II ENGS+ I IP E+KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPTEVKALYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM+ P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEAL 758
>gi|341039005|gb|EGS23997.1| hypothetical protein CTHT_0007080 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 910
Score = 1112 bits (2877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/776 (65%), Positives = 621/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGR+E V+FDKITAR+ +L YGL H DPV + QKV AGVY GVTT QLD+LA
Sbjct: 1 MYVRKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVIAGVYPGVTTAQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S I D+Y+Y N ++GK +++ +
Sbjct: 61 AETAAYMTVTHPDYAVLAARIAVSNLHKQTKKQWSAVIHDLYHYVNPKNGKPCPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ D AI+YDRDF++ YFGFKTLERSYLLK+D ++VERPQHM+MRV+VGI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKIDGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ + ++TY+LMS +FTHA+PTLFNAGTPQPQLSSCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DNVERVIETYNLMSMKFFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL+IH IRA+GSYI GTNG+SNGI+PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV + W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNQDWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EGR + + A+KLW+ IL +Q+ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGRGRRTVKAQKLWYHILEAQVETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLCTEI+E+ +P+E AVCNLAS+ALP +V D +
Sbjct: 421 GTIRCSNLCTEIIEYCAPDEVAVCNLASLALPAFV------------------DYNEGRY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++ NLN+IID+NHYP+ R+SNLRHRPIG+G+QGLAD F+ L +PFES
Sbjct: 463 DFQKLHEVTQVVVRNLNRIIDINHYPVPEARKSNLRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNK IFETIY+ AL AS ++A ++GPYETY GSP+S+GILQ DMW +TPS WDW
Sbjct: 523 PEARELNKQIFETIYHAALTASCDIAKEEGPYETYEGSPVSQGILQYDMWGVTPSPLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+ I K GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 ESLKAKIKKYGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ELGLWS +K +II E GS+ I IP ++KA+YKTVWEI QKT+V MAADRG +
Sbjct: 643 LKDLVELGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQKTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM +P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEAL 758
>gi|378729263|gb|EHY55722.1| ribonucleoside-diphosphate reductase large chain [Exophiala
dermatitidis NIH/UT8656]
Length = 918
Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/784 (65%), Positives = 629/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++GK + +++ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVISDLYHYVNPKNGKPSPMISTET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ L+ AI+YDRDF++ YFGFKTLERSYLLK+ +V ERPQHMLMRV+VGIH
Sbjct: 121 YECVMRHQDELNSAIVYDRDFNYQYFGFKTLERSYLLKIGKQVAERPQHMLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + A++TY+LMSQ FTHA+PTLFNAGTPQPQLSSCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVEKAIETYNLMSQKCFTHASPTLFNAGTPQPQLSSCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNG+SNG++PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHCIRATGSYIAGTNGTSNGLIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FE+L+LRKN GKEE RARDLFYALW PDLFM+RV + W+LFCP +A GLA
Sbjct: 301 LEPWHADVFEWLNLRKNHGKEEVRARDLFYALWTPDLFMKRVEKNQDWTLFCPHEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EGR + I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGRQTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+++P+E AVCNLAS+ALP +V D +
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASLALPTFV------------------DQARGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF RL EV +++T NLNKIID+N+YP+ + SN+RHRPIG+G+QGLAD F+ L LPF+S
Sbjct: 463 DFGRLHEVVQVVTRNLNKIIDINYYPVPEAKNSNMRHRPIGLGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ AL AS ELA + GPY TY GSP+S+GILQ DMWN+TP+D WDW
Sbjct: 523 PEARQLNIQIFETIYHAALTASCELAKEQGPYSTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+ I+K+GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DALKAEIAKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II E GS+ I IP ++KA+YKTVWEI Q+T++ MAADRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTVLQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNIA 766
>gi|31982026|ref|NP_033129.2| ribonucleoside-diphosphate reductase large subunit [Mus musculus]
gi|341941976|sp|P07742.2|RIR1_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase
subunit M1; AltName: Full=Ribonucleotide reductase large
subunit
gi|16741219|gb|AAH16450.1| Ribonucleotide reductase M1 [Mus musculus]
gi|26352964|dbj|BAC40112.1| unnamed protein product [Mus musculus]
gi|74205882|dbj|BAE23230.1| unnamed protein product [Mus musculus]
gi|74214440|dbj|BAE40455.1| unnamed protein product [Mus musculus]
gi|148684655|gb|EDL16602.1| ribonucleotide reductase M1, isoform CRA_b [Mus musculus]
Length = 792
Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/811 (65%), Positives = 650/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +G+ + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVASST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+M N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVMANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+LAEVTK+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFEKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS ELA + GPYETY GSP+SKGILQ DMWN+ P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KPLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N+EEC+ CGS
Sbjct: 762 KALKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|322704073|gb|EFY95672.1| ribonucleoside-diphosphate reductase large chain [Metarhizium
anisopliae ARSEF 23]
Length = 905
Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/782 (64%), Positives = 629/782 (80%), Gaps = 18/782 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V+FDKITAR+ +L YGL EH DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDTEHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S + D+Y+Y N ++ + + +++ D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNERASPMISKDT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ LD AI+YDRDF++ YFGFKTLERSYLLK++ ++VERPQHM+MRV+VGI
Sbjct: 121 YECVMRHKDELDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ + ++TY+LMS +FTHA+PTLFNAGTPQ QLSSCFL+ MKDDSI+GIYDTLK CA+
Sbjct: 181 DNIERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL++H IRA+GSYI GTNG+SNGI+PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EG+ + I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGKGRRTIRAQKLWYSILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+S+P+E AVCNLAS+ALP +V D +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPAFV------------------DYDEGRY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++ NLNKIIDVNHYP++ R SN+RHRPIG+G+QGLAD F+ L +PFES
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDVNHYPVQEARNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNK IFETIY+ AL AS ELA + GPY T+ GSP S+GILQ DMWN+TPSD W+W
Sbjct: 523 PEARELNKQIFETIYHAALTASMELAKEQGPYSTFKGSPASEGILQFDMWNVTPSDLWEW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ I ++G+RNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DTLKQQIKEHGIRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS A+K +II ENGS+ I IP ++KA+YKTVWEI Q+ +V MAADRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPADIKALYKTVWEISQRQVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+ P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMKDPSMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALKVAD 762
Query: 781 AN 782
AN
Sbjct: 763 AN 764
>gi|410909836|ref|XP_003968396.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Takifugu rubripes]
Length = 794
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/818 (62%), Positives = 648/818 (79%), Gaps = 32/818 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVVKRDGRQERVMFDKITSRIQKLCYGLNADFVDPAQITMKVIQGLYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE +A +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N + + + +V+ +
Sbjct: 61 AEISATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPLNKRHSPMVSKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+++N L+ AIIYDRDF +++FGFKTLERSYLLK++ +V ERPQHMLMRVSVGIH+
Sbjct: 121 LDIVLQNKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 TDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IR++GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRSTGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIF+FL+L+KN GKEE RARDLFY +W+PDLFM+RV + WSL CP + GL
Sbjct: 301 LEPWHSDIFDFLELKKNTGKEEQRARDLFYGMWIPDLFMKRVESNQDWSLMCPDECPGLN 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY++YE+EGR K V+ A+++W I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 ECWGEEFEKLYTKYEKEGRVKRVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIVE++S +E AVCNLAS+AL YV + R F
Sbjct: 421 GTIKSSNLCTEIVEYTSSDEVAVCNLASVALNMYV-------------------TAERTF 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LA VTK++ +NLNKIID+N+YP+ +SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFQKLAAVTKVVVKNLNKIIDINYYPVPEAEKSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LN IFETIYY AL+AS ELA + GPYETY GSP+SKGILQ DMW TP+D DW
Sbjct: 522 PEAQLLNTQIFETIYYAALEASCELAAELGPYETYEGSPVSKGILQYDMWEKTPTDLLDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K K+I NGS+ I+ IP ++K +YKTVWEI QKT++ MAADRG +
Sbjct: 642 LKDLTERGLWNEDMKNKLIAHNGSIQNINGIPNDVKQLYKTVWEISQKTIIKMAADRGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRT+ AA+ I+FT LN EK
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFT-----LNKEK 756
Query: 781 ANRADNDVEA--------NLAQVVCSLKNQEECMACGS 810
+ V+A N+A +VCSL+N++EC+ CGS
Sbjct: 757 LKETQDPVKASEEEVKERNMAAMVCSLQNRDECLMCGS 794
>gi|261197195|ref|XP_002625000.1| ribonucleotide reductase large subunit Rnr1 [Ajellomyces
dermatitidis SLH14081]
gi|239595630|gb|EEQ78211.1| ribonucleotide reductase large subunit Rnr1 [Ajellomyces
dermatitidis SLH14081]
gi|239606620|gb|EEQ83607.1| ribonucleotide reductase large subunit Rnr1 [Ajellomyces
dermatitidis ER-3]
Length = 886
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/784 (65%), Positives = 629/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y+N ++ + A +++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNQRPAPMISQGT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++A + AI+YDRDF++ YFGFKTLERSYLL+++ +V ERPQHM+MRV+VGIH
Sbjct: 121 YETVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVEKVIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IR +GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDLRKN GKEE RARDLF ALW PDLFM+RV +G+W+LFCP++A GLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY +YE+EGR K I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGEEFDALYEKYEKEGRGKKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ SP+E AVCNLASIALP +V PV+ +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVD----PVRGE--------------Y 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVT+++ NLNKIID N+YP+E +RSN RHRPI G+QGLAD F+ L LPFES
Sbjct: 463 DFGKLHEVTQVVVRNLNKIIDGNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ +L AS ELA DGPY TY GSP+S+GILQ DMWN+TP+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHASLTASCELAKIDGPYSTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN L
Sbjct: 583 DSLKQDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II + GS+ I IP+++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|327351615|gb|EGE80472.1| ribonucleoside-diphosphate reductase [Ajellomyces dermatitidis ATCC
18188]
Length = 886
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/784 (65%), Positives = 629/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y+N ++ + A +++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNQRPAPMISQGT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++A + AI+YDRDF++ YFGFKTLERSYLL+++ +V ERPQHM+MRV+VGIH
Sbjct: 121 YETVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVEKVIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IR +GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDLRKN GKEE RARDLF ALW PDLFM+RV +G+W+LFCP++A GLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY +YE+EGR K I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGEEFDALYEKYEKEGRGKKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ SP+E AVCNLASIALP +V PV+ +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVD----PVRGE--------------Y 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVT+++ NLNKIID N+YP+E +RSN RHRPI G+QGLAD F+ L LPFES
Sbjct: 463 DFGKLHEVTQVVVRNLNKIIDGNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ +L AS ELA DGPY TY GSP+S+GILQ DMWN+TP+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHASLTASCELAKIDGPYSTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN L
Sbjct: 583 DSLKQDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II + GS+ I IP+++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|427794775|gb|JAA62839.1| Putative ribonucleotide reductase alpha subunit, partial
[Rhipicephalus pulchellus]
Length = 802
Score = 1111 bits (2873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/810 (65%), Positives = 652/810 (80%), Gaps = 32/810 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRD RKEPV FDKIT+R+ KL YGL+ + DP VAQKV G+Y GVTT +LD LA
Sbjct: 25 MFVLKRDSRKEPVHFDKITSRIHKLCYGLNMDFVDPCSVAQKVINGLYPGVTTVELDNLA 84
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK TK FSE ++D+YN N+R+ ++ +++D V
Sbjct: 85 AETAATMTTKHPDYAILAARIAVSNLHKETKKVFSEVVEDLYNMVNERTRLRSPMISDSV 144
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+M NA + AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRV++GIH
Sbjct: 145 YKIVMDNAEVFNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVAIGIHG 204
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++AL TY+LMS+ WFTHA+PTLFN+GTP+PQLSSCFLL MK+DSIEGIYDTLK+CA+
Sbjct: 205 TDVEAALNTYNLMSEKWFTHASPTLFNSGTPRPQLSSCFLLQMKEDSIEGIYDTLKQCAL 264
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++H IRASG+YI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 265 ISKSAGGIGVNVHCIRASGTYIAGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 324
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFL+L+KN GKEE RARDLFYALW+PDLFM+RV +DG WSL CP + GL
Sbjct: 325 LEPWHADIFEFLELKKNTGKEETRARDLFYALWIPDLFMKRVEEDGVWSLMCPHECPGLH 384
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ EFE LY QYE + R + + A++LW IL SQIETGTPYML+KD+CNRKSNQ+NL
Sbjct: 385 EVHSEEFEKLYVQYETDKRYRRQVRAQQLWSAILESQIETGTPYMLYKDACNRKSNQKNL 444
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTE+VE++SP+E AVCNLASIAL R+V++ GS F
Sbjct: 445 GTIKCSNLCTEVVEYTSPDEVAVCNLASIALNRFVKD-------------GS-------F 484
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EV+++IT NLN+IIDVN YPI RSN RHRPIGIG+QGLAD FILL LPF+S
Sbjct: 485 DFQKLREVSQVITRNLNRIIDVNFYPIPEAERSNKRHRPIGIGVQGLADCFILLRLPFDS 544
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+A LN+ IFETIYY AL+AS ELA KDGPYETY GSP+S+GILQ DMW +TP+D WDW
Sbjct: 545 EQAMLLNRQIFETIYYGALEASCELAQKDGPYETYKGSPVSEGILQYDMWGVTPTDLWDW 604
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+E I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIYTRRVLSGEF VVN+HL
Sbjct: 605 AALKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQVVNQHL 664
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLT+ GLW+ +LK +I NGSV + +IPE+LKA+Y+TVWEI QK ++ MAADRG Y
Sbjct: 665 LKDLTDRGLWNESLKNDLIANNGSVQNL-DIPEDLKALYRTVWEIPQKNVLRMAADRGAY 723
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLN+H+ QP++ KLTS+HFY W G+KTGMYYLRT+ AA+AI+FTVD + L ++
Sbjct: 724 IDQSQSLNVHIAQPNYAKLTSMHFYGWKLGLKTGMYYLRTKPAANAIQFTVDKTALKKKQ 783
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
L + CSLKN++EC+ C +
Sbjct: 784 -----------LDGIACSLKNKDECLMCSA 802
>gi|46446982|ref|YP_008347.1| ribonucleoside-diphosphate reductase large chain [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400623|emb|CAF24072.1| probable ribonucleoside-diphosphate reductase large chain
[Candidatus Protochlamydia amoebophila UWE25]
Length = 773
Score = 1111 bits (2873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/808 (64%), Positives = 641/808 (79%), Gaps = 37/808 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRK+ V+FDKITAR+ KL YGL H DPVL+A KV G++ GVTT++LD LA
Sbjct: 1 MFVTKRDGRKQEVKFDKITARILKLCYGLDSVHIDPVLIAMKVIEGLFDGVTTSELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA++TV HPDYALLA R+A+SNL K T SF+ TI ++Y+Y + ++GKKASL+A+DV
Sbjct: 61 AEVAASLTVKHPDYALLASRIAISNLQKNTNKSFARTIGELYHYIDPKTGKKASLIAEDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+ +A LD +IYDRDF +DYFGFKTLERSYLLK++ +V+ERPQH+LMRVS+GIHK
Sbjct: 121 YKIVQNHAEILDATMIYDRDFGYDYFGFKTLERSYLLKINGKVIERPQHLLMRVSIGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +A++TYH MS+ WFTHATPTLFNAGTP PQ+SSCFL+ +K+DSIEGI+DTLK CA
Sbjct: 181 NDISAAIETYHWMSERWFTHATPTLFNAGTPYPQMSSCFLMQVKEDSIEGIFDTLKACAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS++AGGIGLSIHNIRA+GSYI GT G SNGI+PML+V+NDTARY+DQGGGKRKG+FAIY
Sbjct: 241 ISQAAGGIGLSIHNIRATGSYIRGTGGISNGIIPMLRVYNDTARYIDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI+ FLDLRKN GKEE RARDLF ALW+PDLFM+RV +DG WSLFCP++A L
Sbjct: 301 LEPWHADIYAFLDLRKNHGKEELRARDLFTALWIPDLFMKRVEEDGVWSLFCPNEAPNLH 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFEHLY YE+EG+A+ VI A+ LWF+IL SQIETG PYMLFKD+CN KSNQ++L
Sbjct: 361 ECWGEEFEHLYCLYEQEGKAREVIKAQDLWFKILESQIETGNPYMLFKDACNYKSNQKHL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI+E++SP E AVCNLASIALPR++ N F
Sbjct: 421 GTIKLSNLCTEIIEYTSPHEAAVCNLASIALPRFI--------------------INGHF 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L EVT++IT NL+KIID N YPI + SNL HRPIGIG+QGLAD FILL +PF+S
Sbjct: 461 DHQKLFEVTQVITRNLDKIIDENSYPIVEAQTSNLLHRPIGIGVQGLADAFILLRMPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN+ IFETIY+ AL AS +LA K G Y +Y GSP+SKGILQ +MWN+ PS WDW
Sbjct: 521 KEARALNQAIFETIYFGALTASKDLAKKKGRYPSYEGSPISKGILQYEMWNVKPSSNWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+ I+ +G+RNSLLVA MPTASTSQILGNNECFEPYTSN+YTRRVLSGEFIVVNKHL
Sbjct: 581 EALKTEIAVHGIRNSLLVALMPTASTSQILGNNECFEPYTSNLYTRRVLSGEFIVVNKHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
++DL + LW+ +K +I+ NGS+ I EIP E+K +YKTVWEIKQK L+DMAADRG +
Sbjct: 641 MRDLVKRELWNEEMKQRILAANGSIQGIEEIPSEIKELYKTVWEIKQKALIDMAADRGPF 700
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
I QSQSLN+ +E P KL+S+HFYAW KG+KTGMYYLR +AAA+AIKFTV
Sbjct: 701 ICQSQSLNLFVESPTFAKLSSMHFYAWKKGLKTGMYYLRIKAAAEAIKFTV--------- 751
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMAC 808
+ + E ++ CSL +C++C
Sbjct: 752 ----NQNYEQPQQEIACSL----DCLSC 771
>gi|346979155|gb|EGY22607.1| ribonucleoside-diphosphate reductase large chain [Verticillium
dahliae VdLs.17]
Length = 903
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/776 (65%), Positives = 625/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V+FDKITAR+ +L YGL +H DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S + D+Y+Y N ++ + + ++A +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNNRPSPMIAPET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +MK+ LD AI+YDRDF++ YFGFKTLERSYLLK+D ++ ERPQHM+MRVSVGI
Sbjct: 121 YEFVMKHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIAERPQHMIMRVSVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ + ++TY+LMS +FTHA+PTLFNAGTPQ QLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 DNVERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL++H IRA+GSYI GTNG+SNGI PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGITPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+ G+ + I A+KLW+ +L +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYEKAGKGRKTIKAQKLWYAVLEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+S+P+E AVCNLAS+ALP YV D N ++
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPAYV------------------DYNNGVY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +VT+++ NLN+IIDVNHYP+ R SN+RHRPIG+G+QGLAD F+ L +PFES
Sbjct: 463 DFKKLHQVTQVVVRNLNRIIDVNHYPVIEARNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNK IFETIY+ AL S +LA ++GPY TY GSP+S+GILQ DMWN+ P+D WDW
Sbjct: 523 PEAKELNKQIFETIYHAALTMSCKLAQEEGPYSTYEGSPVSQGILQYDMWNVKPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 ADLKSQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS ++K +II ENGS+ I IP ++K++YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDMGLWSDSMKNRIIAENGSIQNIPNIPADIKSLYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM+ P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDKEAL 758
>gi|200765|gb|AAA40061.1| ribonucleotide reductase subunit M1 [Mus musculus]
Length = 792
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/811 (65%), Positives = 649/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +G+ + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVASST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+M N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVMANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHAPPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+LAEVTK+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFEKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS ELA + GPYETY GSP+SKGILQ DMWN+ P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KPLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N+EEC+ CGS
Sbjct: 762 KALKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|302418985|ref|XP_003007323.1| ribonucleoside-diphosphate reductase large chain [Verticillium
albo-atrum VaMs.102]
gi|261352974|gb|EEY15402.1| ribonucleoside-diphosphate reductase large chain [Verticillium
albo-atrum VaMs.102]
Length = 903
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/776 (65%), Positives = 625/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V+FDKITAR+ +L YGL +H DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S + D+Y+Y N ++ + + ++A +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNNRPSPMIAPET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +MK+ LD AI+YDRDF++ YFGFKTLERSYLLK+D ++ ERPQHM+MRVSVGI
Sbjct: 121 YEFVMKHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIAERPQHMIMRVSVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ + ++TY+LMS +FTHA+PTLFNAGTPQ QLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 DNVERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL++H IRA+GSYI GTNG+SNGI PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGITPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+ G+ + I A+KLW+ +L +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYEKAGKGRKTIKAQKLWYAVLEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+S+P+E AVCNLAS+ALP YV D N ++
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPAYV------------------DYNNGVY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +VT+++ NLN+IIDVNHYP+ R SN+RHRPIG+G+QGLAD F+ L +PFES
Sbjct: 463 DFKKLHQVTQVVVRNLNRIIDVNHYPVIEARNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNK IFETIY+ AL S +LA ++GPY TY GSP+S+GILQ DMWN+ P+D WDW
Sbjct: 523 PEAKELNKQIFETIYHAALTMSCKLAQEEGPYSTYEGSPVSQGILQYDMWNVKPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 ADLKSQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS ++K +II ENGS+ I IP ++K++YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDMGLWSDSMKNRIIAENGSIQNIPNIPADIKSLYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM+ P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDKEAL 758
>gi|403170913|ref|XP_003330173.2| ribonucleoside-diphosphate reductase large chain [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
gi|375168944|gb|EFP85754.2| ribonucleoside-diphosphate reductase large chain [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
Length = 872
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/797 (64%), Positives = 635/797 (79%), Gaps = 21/797 (2%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V KRDGR+E V FDKITAR+ KL YGL H +P+ + +KV GV+ GVTT +LD LAAE
Sbjct: 4 VYKRDGRREKVAFDKITARINKLCYGLDNVHVEPIEITKKVINGVFNGVTTVELDNLAAE 63
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA MT HPDYA+LA R+A+SNLHK TK FS+ I+D+Y Y N +G+ +S+++ + YE
Sbjct: 64 TAAYMTTRHPDYAVLAARIAISNLHKETKKLFSQVIEDLYTYVNPINGRPSSMISQETYE 123
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDD 182
+ NA L+ A+IYDRDF+++YFGFKTLERSYLL++ +V ERPQHMLMRV+VGIH D
Sbjct: 124 AVQANAEALNSAVIYDRDFNYNYFGFKTLERSYLLRIKGKVAERPQHMLMRVAVGIHGMD 183
Query: 183 TDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIIS 242
+ A++TY+LMS+ +FTHA+PTLFNAGTP PQLSSCFL+ K DSI+GIYDTLK CA+IS
Sbjct: 184 VEKAIRTYNLMSEKYFTHASPTLFNAGTPHPQLSSCFLVASKSDSIDGIYDTLKTCAMIS 243
Query: 243 KSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLE 302
KSAGGIGL I+NIRA+GSYI GTNG SNGIVPML+VFN+TARYVDQGG KR GAFAIYLE
Sbjct: 244 KSAGGIGLHINNIRATGSYISGTNGYSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLE 303
Query: 303 PWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADS 362
PWHAD+F++LDLRKN GKEE RARDLFYALW+PDLFM RV + W LFCP++A GLAD
Sbjct: 304 PWHADVFDWLDLRKNHGKEESRARDLFYALWIPDLFMSRVEKNQDWPLFCPAEAPGLADV 363
Query: 363 WGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGT 422
+G EFE L+++YE+E RAK + A+KLW+ IL +Q ETG P+ML+KD+ N+KSNQ+NLGT
Sbjct: 364 YGEEFEALFAKYEKENRAKKTVKAQKLWYAILEAQTETGNPFMLYKDAANKKSNQKNLGT 423
Query: 423 IKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDF 482
IKSSNLCTEI+E+S+P+E AVCNLASIALP Y+ D K +DF
Sbjct: 424 IKSSNLCTEIIEYSAPDEVAVCNLASIALPTYI-----------------VDGK---YDF 463
Query: 483 ERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPE 542
+L EVTK +T NLNKIIDVN+YP+ ++SN+RHRPIGIG+QGLAD F +L LPFESPE
Sbjct: 464 NKLHEVTKEVTYNLNKIIDVNYYPVPEAKKSNMRHRPIGIGVQGLADAFQILKLPFESPE 523
Query: 543 AQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSS 602
A++LN IFET+Y+ +L+AS ELA+K+GPYET+ GSP S+GILQ DMWN+ PSD W+W S
Sbjct: 524 AKKLNTQIFETLYHASLEASNELAIKEGPYETFPGSPASQGILQFDMWNVKPSDLWEWDS 583
Query: 603 LREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLK 662
L+E + G+RNSLL+APMPTASTSQILG NECFEPYTSNIYTRRVL+GEF +VN LLK
Sbjct: 584 LKEKVKTTGIRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQIVNPWLLK 643
Query: 663 DLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYID 722
+L E+GLW +K +II GS+ I IP E+KA+YKTVWEI QK ++DMAADRG +ID
Sbjct: 644 ELVEMGLWDDEMKNRIIAHQGSIQNIPNIPTEMKAVYKTVWEISQKIILDMAADRGAFID 703
Query: 723 QSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK-A 781
QSQSLNIH++ P G+LTS+HFYAW KG+KTGMYYLRTRAAA+AI+FTVD + + K A
Sbjct: 704 QSQSLNIHLQAPTFGQLTSMHFYAWKKGLKTGMYYLRTRAAANAIQFTVDKKLQDEAKAA 763
Query: 782 NRADNDVEANLAQVVCS 798
N+A V ++ +V S
Sbjct: 764 NKAATLVSSSATLLVPS 780
>gi|344296860|ref|XP_003420120.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Loxodonta africana]
Length = 792
Score = 1110 bits (2871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/811 (65%), Positives = 651/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +VA+
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVANST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE+ GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKRGRIRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK+I NLNKIID+N+YP+ SN RHRP+GIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEAFLSNKRHRPVGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS ELA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIHEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++ECM CGS
Sbjct: 762 KASKEEEEKERNTAAMVCSLENRDECMMCGS 792
>gi|354495277|ref|XP_003509757.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Cricetulus griseus]
gi|344240187|gb|EGV96290.1| Ribonucleoside-diphosphate reductase large subunit [Cricetulus
griseus]
Length = 792
Score = 1110 bits (2871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/811 (65%), Positives = 650/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D++NY N +G+ + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLHNYINPHNGRHSPMVASST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+M N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVMANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFQKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+ P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVVPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ ISEIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSISEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L + +
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDRE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N+EEC+ CGS
Sbjct: 762 KALKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|322696603|gb|EFY88393.1| ribonucleoside-diphosphate reductase large chain [Metarhizium
acridum CQMa 102]
Length = 905
Score = 1110 bits (2871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/782 (64%), Positives = 629/782 (80%), Gaps = 18/782 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V+FDKITAR+ +L YGL EH DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDTEHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S + D+Y+Y N ++ + + +++ D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNERASPMISKDT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ LD AI+YDRDF++ YFGFKTLERSYLLK++ ++VERPQHM+MRV+VGI
Sbjct: 121 YECVMRHKDELDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ + ++TY+LMS +FTHA+PTLFNAGTPQ QLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 DNIERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL++H IRA+GSYI GTNG+SNGI+PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EG+ + + A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGKGRRTVRAQKLWYSILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+S+P+E AVCNLAS+ALP +V D +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPAFV------------------DYNEGRY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++ NLNKIIDVN+YP++ R SN+RHRPIG+G+QGLAD F+ L +PFES
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDVNYYPVQEARNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNK IFETIY+ AL AS ELA + GPY T+ GSP S+GILQ DMWN+TPSD W+W
Sbjct: 523 PEARELNKQIFETIYHAALTASMELAKEQGPYSTFKGSPASEGILQFDMWNVTPSDLWEW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ I ++G+RNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DTLKQQIKEHGIRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS A+K +II ENGS+ I IP ++KA+YKTVWEI Q+ +V MAADRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPADIKALYKTVWEISQRQVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+ P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMKDPSMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALMVAD 762
Query: 781 AN 782
AN
Sbjct: 763 AN 764
>gi|296479831|tpg|DAA21946.1| TPA: ribonucleoside-diphosphate reductase M1 chain [Bos taurus]
Length = 791
Score = 1110 bits (2870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/810 (65%), Positives = 651/810 (80%), Gaps = 19/810 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D++NY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY +YE+EGR + VI A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYERYEKEGRVRKVIKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +LAEVTK+I NLNKIID+N+YP+ SN HRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFTKLAEVTKVIVRNLNKIIDINYYPVPEASLSNKLHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+E I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 NLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ + E N A +VCSL+N++EC+ CGS
Sbjct: 762 KVSKEEEKERNTAAMVCSLENRDECLMCGS 791
>gi|226293011|gb|EEH48431.1| ribonucleoside-diphosphate reductase large chain [Paracoccidioides
brasiliensis Pb18]
Length = 881
Score = 1110 bits (2870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/784 (65%), Positives = 628/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y+N ++G+ A +++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNGRPAPMISQST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+M++A + AI+YDRDF++ YFGFKTLERSYLL+++ +V ERPQHM+MRV++GIH
Sbjct: 121 YEIVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IR +GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDLRKN GKEE RARDLF ALW PDLFM+RV +G+W+LFCP++A GLA
Sbjct: 301 LEPWHMDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EGR K I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ SP+E AVCNLASIALP +V D+ +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFV------------------DAVRGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVT+++ NLN+IID N+YP+E +RSN RHRPI G+QGLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVTQVVVRNLNRIIDRNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ L AS ELA DGPY +Y GSP+S+GILQ DMW +TP+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHACLTASCELAKVDGPYSSYEGSPVSQGILQYDMWGVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN L
Sbjct: 583 DSLKQEIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II + GS+ I IP+++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|225560468|gb|EEH08749.1| ribonucleoside-diphosphate reductase subunit large [Ajellomyces
capsulatus G186AR]
Length = 881
Score = 1110 bits (2870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/784 (65%), Positives = 626/784 (79%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA LA R+AVSNLHK TK FS I D+Y+Y+N ++ + A +++
Sbjct: 61 AETAAYMTVTHPDYATLAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNQRPAPMISQTT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++A + AI+YDRDF++ YFGFKTLERSYLL+++ +V ERPQHM+MRV+VGIH
Sbjct: 121 YETVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IR +GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDLRKN GKEE RARDLF ALW PDLFM+RV + +W+LFCP++A GLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEQNSEWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EGR K + A+KLW+ IL +Q ETG P+ML+KDSCNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTVKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ SP+E AVCNLASIALP +V P++ +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVD----PIRGE--------------Y 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVT+++ NLNKIID N+YP+E +RSN RHRPI G+QGLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVTQVVVRNLNKIIDRNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ L AS ELA DGPY TY GSP+S+GILQ DMWN+TP+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHAGLTASCELAKIDGPYSTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN L
Sbjct: 583 DSLKQDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II E GS+ I IP+++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIAEGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|169603614|ref|XP_001795228.1| hypothetical protein SNOG_04815 [Phaeosphaeria nodorum SN15]
gi|111066086|gb|EAT87206.1| hypothetical protein SNOG_04815 [Phaeosphaeria nodorum SN15]
Length = 903
Score = 1110 bits (2870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/784 (64%), Positives = 630/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL +H DP + KV +GVY GVTT QLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYHGVTTIQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK TK FS + D+Y Y N ++GK +++D +
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVSDLYTYVNPKNGKSQPMISDYI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II +A L+ AI+YDRDF++ +FGFKTLERSYLL+++ +V ERPQHMLMRV+VGIH
Sbjct: 121 YKIIQDHAEELNSAIVYDRDFNYQFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + A++TY MSQ +FTHA+PTLFNAGTP PQ+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 EDIEKAIETYDYMSQKYFTHASPTLFNAGTPNPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNG+SNG++PML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F FLDLRKN GKEE RARDLFYALW+PDLFM+RV+++G+W+L CP++ GLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE E + + + A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEELYTRYERENKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVEF++P+E AVCNLAS+ALP +V D K F
Sbjct: 421 GTIRSSNLCTEIVEFTAPDEVAVCNLASLALPSFV------------------DYKRGEF 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVT ++T NLNKII+VNHYP+E RRSN RHRPIG+G+QGLAD F+ L LPFES
Sbjct: 463 DFHKLHEVTMVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGLGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LN IFETIY+ AL +S ++A + GPY TY GSP+SKG LQ D+W +TPSD WDW
Sbjct: 523 PEAKKLNTQIFETIYHAALTSSCDIAKELGPYATYEGSPVSKGQLQYDLWGVTPSDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+SL++ I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 ASLKDKIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II + GS+ +I IPEE K +YKTVWEI Q+T++ MAADRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIADGGSIQRIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEALQVTD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|409078833|gb|EKM79195.1| hypothetical protein AGABI1DRAFT_58613 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 868
Score = 1109 bits (2869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/785 (65%), Positives = 633/785 (80%), Gaps = 20/785 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
+V KR RKE V+FDKIT+R++KL YGL + DPV V QKV GVY+GVTT +LD LA+
Sbjct: 3 FVFKRGIRKERVQFDKITSRIEKLCYGLDTNYVDPVEVTQKVVQGVYQGVTTVELDNLAS 62
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA +T HPDYA+LA R+A+SNLHK TK +FS+ I D+Y+Y N ++GK A +++ + Y
Sbjct: 63 ETAAYLTTKHPDYAVLAARIAISNLHKETKKTFSQVISDLYHYINPKNGKPAGMISKETY 122
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
+++MK+A L+ AIIY RDF+++YFGFKTLERSYLL++++RV ERPQHM+MRV+VGIH +
Sbjct: 123 DVVMKHADTLNSAIIYTRDFNYNYFGFKTLERSYLLRINNRVAERPQHMIMRVAVGIHGE 182
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D D ++TY+LMS+ +FTHA+PTLFNAGTP PQLSSCFL+CMKDDSIEGIYDTLK CA+I
Sbjct: 183 DIDRVMETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIEGIYDTLKSCAMI 242
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK+AGGIGL+IH IRA+GSYI GTNG SNGIVPML+ ++ TARYVDQGG KR GAFAIYL
Sbjct: 243 SKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+F+FLDLRKN GKEE RARDLFYALW+PDLFM+RV +G WSLFCPS+A GL +
Sbjct: 303 EPWHADVFDFLDLRKNHGKEEARARDLFYALWIPDLFMKRVEANGDWSLFCPSEAPGLHE 362
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EFE LY +YE+EGR + + A+KLW+ IL SQIETG P+M++KD N KSNQ+NLG
Sbjct: 363 VWGPEFEALYEKYEKEGRQRKTMPAQKLWYAILESQIETGGPFMVYKDHANSKSNQKNLG 422
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+E+SSP+ETAVCNLAS+ALP ++ N +D
Sbjct: 423 TIKSSNLCTEIIEYSSPDETAVCNLASLALPTFI--------------------NNGKYD 462
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L EV K++ NLN+IIDVN+YPI RRSN+RHRPIGIG+QGLADTF+ L +PF+SP
Sbjct: 463 FQKLHEVAKVVAFNLNRIIDVNYYPIPEARRSNMRHRPIGIGVQGLADTFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA+ LN IFETIY+ AL+AS+E+AV +G YETY GSP+S+G LQ D+W ITP+D WDW+
Sbjct: 523 EAKLLNIQIFETIYHGALEASSEMAVSEGRYETYEGSPVSQGQLQYDLWGITPTDLWDWT 582
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
SL++ I++ G+RNSLLV+PMPTASTSQILGNNECFEPYTSNIYTRRVL+GEF VV LL
Sbjct: 583 SLKQQIARTGIRNSLLVSPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
++L L LW +K II NGSV I IP ++KAIYKTVWEI QK ++D+AADRG +I
Sbjct: 643 RELVGLDLWDDNMKNMIIAHNGSVQNIPNIPADVKAIYKTVWEISQKKVLDLAADRGPFI 702
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
QSQSLN+H++ P G+LTS+HFY W KG+KTGMYYLRTR AA AI+FTVD SVLN K
Sbjct: 703 CQSQSLNVHLQSPTLGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSVLNQAKK 762
Query: 782 NRADN 786
A N
Sbjct: 763 QNASN 767
>gi|330929115|ref|XP_003302526.1| hypothetical protein PTT_14367 [Pyrenophora teres f. teres 0-1]
gi|311322081|gb|EFQ89385.1| hypothetical protein PTT_14367 [Pyrenophora teres f. teres 0-1]
Length = 889
Score = 1109 bits (2869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/795 (63%), Positives = 640/795 (80%), Gaps = 23/795 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL +H DP + KV +GVY+GVTT QLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK TK FS ++D+Y Y N ++GK +++D V
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVEDLYTYVNPKNGKSQPMISDHV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II +A L+ AI+YDRDF++ +FGFKTLERSYLL+++ +V ERPQHMLMRV+VGIH
Sbjct: 121 YKIIQDHAEELNSAIVYDRDFNYQFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D A++TY MSQ +FTHA+PTLFNAGTP PQ+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 EDIPKAIETYDYMSQKYFTHASPTLFNAGTPSPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNG+SNG++PML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F FLDLRKN GKEE RARDLFYALW+PDLFM+RV+++G+W+L CP++ GLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY YE++ + + + A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKQNKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+++P+E AVCNLAS+ALP +V D K F
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASLALPSFV------------------DYKRGEF 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++T NLNKII+VNHYP+E RRSN RHRPIG+G+QGLAD F+ L LPFES
Sbjct: 463 DFQKLHEVTQVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGMGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ AL +S ++A + GPY+TY GSP+S+GILQ DMWN+TP+D WDW
Sbjct: 523 EEAKKLNIQIFETIYHAALTSSCDIAKELGPYQTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+SL+ I+++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 ASLKAKIAEHGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II + GS+++I IPEE K +YKTVWEI Q+T++ MAADRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIADGGSIARIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD E+
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVD-----QEQ 757
Query: 781 ANRADNDVEANLAQV 795
AD ++ L ++
Sbjct: 758 LKVADTNIAKALPKI 772
>gi|302657477|ref|XP_003020459.1| hypothetical protein TRV_05425 [Trichophyton verrucosum HKI 0517]
gi|291184296|gb|EFE39841.1| hypothetical protein TRV_05425 [Trichophyton verrucosum HKI 0517]
Length = 872
Score = 1109 bits (2869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/770 (65%), Positives = 622/770 (80%), Gaps = 18/770 (2%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DGRKE V+FDKITAR+ +L YGL EH D + Q+V +GVY+GVTT +LD LAAETAA
Sbjct: 4 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLAAETAAY 63
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
MTV HPDYA+LA R+AVSNLHK TK FS I+D+Y+Y N ++G+ A ++++ EI+MK
Sbjct: 64 MTVTHPDYAILAARIAVSNLHKQTKKQFSSVIEDLYHYVNPKNGRPAPMISEKTREIVMK 123
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSA 186
+A L+ AI+YDRDF++ YFGFKTLERSYLL+ + +V ERPQHM+MRV+VGIH +D +
Sbjct: 124 HAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHGEDVEKV 183
Query: 187 LKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAG 246
++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+ISK+AG
Sbjct: 184 IETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAG 243
Query: 247 GIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHA 306
GIGL++H IRA+GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIYLEPWHA
Sbjct: 244 GIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 303
Query: 307 DIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIE 366
DIFEFLDLRKN GKEE RARDLF ALW PDLFM+RV +G W+LFCP++A GLAD +G E
Sbjct: 304 DIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGEE 363
Query: 367 FEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSS 426
FE LY +YE+EGR + I A+KLW+ IL +Q ETG P+ML+KDSCNRKSNQ+NLGTI+SS
Sbjct: 364 FEALYEKYEKEGRGRTTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNLGTIRSS 423
Query: 427 NLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLA 486
NLCTEIVE+++P+E AVCNLASIALP +V D+ +DF +L
Sbjct: 424 NLCTEIVEYTAPDEVAVCNLASIALPTFV------------------DAVRGEYDFGKLH 465
Query: 487 EVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQL 546
EVT+++ NLN+IID NHYP+E RRSN RHRPI +G+QGLAD F+ L LPF+SPEA+ L
Sbjct: 466 EVTQVVVRNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDSPEAKLL 525
Query: 547 NKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREM 606
N IFET+Y+ AL AS ELA DGPY +Y GSP+S+GILQ DMWN+TP+D WDW L+
Sbjct: 526 NTQIFETLYHAALTASCELAKVDGPYSSYEGSPVSQGILQYDMWNVTPTDLWDWDGLKAE 585
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTE 666
ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN LLKDL +
Sbjct: 586 ISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 645
Query: 667 LGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQS 726
LGLWS +K +II + GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +IDQSQS
Sbjct: 646 LGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAFIDQSQS 705
Query: 727 LNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
LNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 706 LNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQL 755
>gi|301112881|ref|XP_002998211.1| ribonucleoside-diphosphate reductase large subunit [Phytophthora
infestans T30-4]
gi|262112505|gb|EEY70557.1| ribonucleoside-diphosphate reductase large subunit [Phytophthora
infestans T30-4]
Length = 793
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/813 (63%), Positives = 652/813 (80%), Gaps = 23/813 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V+FDKITAR+ KL YGL+ ++ D + ++QKV AGVY GVTT++LDELA
Sbjct: 1 MYVVKRDGRREDVKFDKITARITKLCYGLNPDYVDAIKISQKVVAGVYPGVTTSELDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA + HPD++ LA R+AVSNLHK T FS+ I+ + ++++G A L+ADDV
Sbjct: 61 AETAAYQSTQHPDFSKLAARIAVSNLHKNTNKVFSDNIEVFHKNAHEKTGAAAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+M++ L+ AII+DRDF++DYFGFKTLER YL +++ +VVERPQ M++RV++GIHK
Sbjct: 121 YEIVMQHKDELNSAIIHDRDFEYDYFGFKTLERGYLFRVNGKVVERPQQMILRVALGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D SAL+TY LMSQ +FTHATPTLFNAGTP+PQLSSCFLL M+DDSIEGIYDTLK+CA
Sbjct: 181 SDITSALETYELMSQKFFTHATPTLFNAGTPRPQLSSCFLLAMQDDSIEGIYDTLKQCAC 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+S+HNIRA+ SYI GTNGSSNGI+PML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 241 ISKWAGGIGISMHNIRATNSYIRGTNGSSNGIIPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN G E RARDLFYALWVPDLFM+RV +GKWSLFCP++A GL
Sbjct: 301 LEPWHADVFEFLDLRKNHGNELHRARDLFYALWVPDLFMKRVEANGKWSLFCPNEAPGLY 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY +YE EGRA+ I+A++LWF IL++QIETG P+ML+KD+ NRKSNQQNL
Sbjct: 361 ECWGDEFETLYEKYETEGRARKTINAQQLWFAILDAQIETGVPFMLYKDAANRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLC E++E++SP+E AVCNLAS+ALP++V ++ +F
Sbjct: 421 GTIRSSNLCCEVMEYTSPDEVAVCNLASVALPKFV--------------------EDAVF 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+ +L EV K+IT NLNK+IDVN+YP+ R+SN+RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 461 DYRKLYEVVKVITRNLNKVIDVNYYPVAEARKSNMRHRPIGIGVQGLADAFILMNYPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
P+AQ+LNK+IFETIY+ A++ S E+AV+ GPYET+ GSP SKGI Q DMW +TP S W+
Sbjct: 521 PQAQELNKNIFETIYFAAMETSMEIAVELGPYETFQGSPASKGIFQFDMWGVTPQSGLWN 580
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W++L++ + K+G+RNSLLVAPMPTAST+QILGNNE EPYTSN+Y RRVL+GEF +VNKH
Sbjct: 581 WAALKDDVIKHGLRNSLLVAPMPTASTAQILGNNESIEPYTSNMYNRRVLAGEFTIVNKH 640
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
L+K+L ELG+W+ ++ +I+ + GSV KI IPE++K YKTVWEIKQK ++D++ADRG
Sbjct: 641 LMKELIELGIWTPEVRNQILNDGGSVQKIKTIPEDVKEKYKTVWEIKQKAVLDLSADRGA 700
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YI QSQSLNIH+ P KLTS+HFYAW KG+KTGMYY+R R ADAI+FTVD ++ +
Sbjct: 701 YICQSQSLNIHIADPTISKLTSMHFYAWKKGLKTGMYYMRGRPKADAIQFTVDKQGIDLQ 760
Query: 780 KAN-RADNDVEANLAQVVCSLKNQE-ECMACGS 810
+A A A+ V + E EC+ CG+
Sbjct: 761 RAKEEATKTAPTPAAETVTRAGDDEDECLVCGA 793
>gi|348555237|ref|XP_003463430.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Cavia porcellus]
Length = 792
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/811 (64%), Positives = 652/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D++NY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY +YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYERYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK+I NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAADRG +
Sbjct: 642 LKDLTERGLWNEKMKNQIIACNGSIQTILEIPDDLKQLYKTVWEISQKTVLKMAADRGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 762 KASKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|164519000|ref|NP_001106767.1| ribonucleoside-diphosphate reductase large subunit [Bos taurus]
gi|158455067|gb|AAI09487.2| RRM1 protein [Bos taurus]
Length = 791
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/810 (65%), Positives = 650/810 (80%), Gaps = 19/810 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D++NY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY +YE+EGR + VI A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYERYEKEGRVRKVIKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +LAEVTK+I NLNKIID+N+YP+ SN HRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFTKLAEVTKVIVRNLNKIIDINYYPVPEASLSNKLHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+E I+K GVRNSLL+APMPTAST QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 NLLKEKIAKYGVRNSLLIAPMPTASTVQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ + E N A +VCSL+N++EC+ CGS
Sbjct: 762 KVSKEEEKERNTAAMVCSLENRDECLMCGS 791
>gi|327301679|ref|XP_003235532.1| ribonucleoside-diphosphate reductase large subunit [Trichophyton
rubrum CBS 118892]
gi|326462884|gb|EGD88337.1| ribonucleoside-diphosphate reductase large subunit [Trichophyton
rubrum CBS 118892]
Length = 870
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/778 (65%), Positives = 624/778 (80%), Gaps = 18/778 (2%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DGRKE V+FDKITAR+ +L YGL EH D + Q+V +GVY+GVTT +LD LAAETAA
Sbjct: 4 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLAAETAAY 63
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++G+ A ++++ EI+MK
Sbjct: 64 MTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYVNPKNGRPAPMISEKTREIVMK 123
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSA 186
+A L+ AI+YDRDF++ YFGFKTLERSYLL+ + +V ERPQHM+MRV+VGIH +D +
Sbjct: 124 HAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHGEDVEKV 183
Query: 187 LKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAG 246
++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+ISK+AG
Sbjct: 184 IETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAG 243
Query: 247 GIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHA 306
GIGL++H IRA+GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIYLEPWHA
Sbjct: 244 GIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 303
Query: 307 DIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIE 366
DIFEFLDLRKN GKEE RARDLF ALW PDLFM+RV +G W+LFCP++A GLAD +G E
Sbjct: 304 DIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGEE 363
Query: 367 FEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSS 426
FE LY +YE+EGR + I A+KLW+ IL +Q ETG P+ML+KDSCNRKSNQ+NLGTI+SS
Sbjct: 364 FEALYEKYEKEGRGRTTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNLGTIRSS 423
Query: 427 NLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLA 486
NLCTEIVE+++P+E AVCNLASIALP +V D+ +DF +L
Sbjct: 424 NLCTEIVEYTAPDEVAVCNLASIALPTFV------------------DAVRGEYDFGKLH 465
Query: 487 EVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQL 546
EVT+++ NLN+IID NHYP+E RRSN RHRPI +G+QGLAD F+ L LPF+SPEA+ L
Sbjct: 466 EVTQVVVRNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDSPEAKLL 525
Query: 547 NKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREM 606
N IFET+Y+ AL AS ELA DGPY +Y GSP+S+GILQ DMWN+TP+D WDW L+
Sbjct: 526 NTQIFETLYHAALTASCELAKVDGPYSSYEGSPVSQGILQYDMWNVTPTDLWDWDGLKAE 585
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTE 666
ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN LLKDL +
Sbjct: 586 ISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 645
Query: 667 LGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQS 726
LGLWS +K +II + GS+ IS IP ++KA+YKTVWEI Q+T+V MAADRG +IDQSQS
Sbjct: 646 LGLWSDNMKNRIIADGGSIQNISNIPADIKALYKTVWEISQRTIVQMAADRGAFIDQSQS 705
Query: 727 LNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRA 784
LNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L N A
Sbjct: 706 LNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLKVVDTNVA 763
>gi|367054108|ref|XP_003657432.1| hypothetical protein THITE_2123125 [Thielavia terrestris NRRL 8126]
gi|347004698|gb|AEO71096.1| hypothetical protein THITE_2123125 [Thielavia terrestris NRRL 8126]
Length = 912
Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/776 (65%), Positives = 626/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGR+E V+FDKITAR+ +L YGL +H DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S + D+Y+Y N ++G+ + +++ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNGRPSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ LD AI+YDRDF++ YFGFKTLERSYLL++D ++VERPQHM+MRV+VGI
Sbjct: 121 YECVMRHKDELDSAIVYDRDFNYQYFGFKTLERSYLLRLDGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ + L+TY+LMS +FTHA+PTLFNAGTPQ QLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 DNIERVLETYNLMSNKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL+IH IRA+GSYI GTNG+SNGI+PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G+W+L CP++ GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EGR + + A+KLW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGRGRKTVRAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLCTEI+E+S+P+E AVCNLAS+ALP +V D ++
Sbjct: 421 GTIRGSNLCTEIIEYSAPDEVAVCNLASLALPAFV------------------DYNEGVY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++ NLN+IID+NHYP++ SN+RHRPIG+G+QGLADTF+ L +PFES
Sbjct: 463 DFKKLHEVTQVVVRNLNRIIDINHYPVKEAYNSNMRHRPIGVGVQGLADTFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNK IFETIY+ AL AS +LA ++GPY TY GSP+S+GILQ DMWN+ PSD WDW
Sbjct: 523 PEARELNKQIFETIYHAALTASCKLAQEEGPYSTYEGSPVSQGILQYDMWNVKPSDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+ I ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DALKAQIKEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIAAGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM +P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEAL 758
>gi|240280028|gb|EER43532.1| ribonucleoside-diphosphate reductase subunit large [Ajellomyces
capsulatus H143]
gi|325088748|gb|EGC42058.1| ribonucleoside-diphosphate reductase subunit large [Ajellomyces
capsulatus H88]
Length = 881
Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/784 (65%), Positives = 626/784 (79%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA LA R+AVSNLHK TK FS I D+Y+Y+N ++ + A +++
Sbjct: 61 AETAAYMTVTHPDYATLAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNQRPAPMISQTT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++A + AI+YDRDF++ YFGFKTLERSYLL+++ +V ERPQHM+MRV+VGIH
Sbjct: 121 YETVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IR +GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDLRKN GKEE RARDLF ALW PDLFM+RV + +W+LFCP++A GLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNSEWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EGR K + A+KLW+ IL +Q ETG P+ML+KDSCNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTVKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ SP+E AVCNLASIALP +V P++ +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVD----PIRGE--------------Y 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVT+++ NLNKIID N+YP+E +RSN RHRPI G+QGLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVTQVVVRNLNKIIDRNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ L AS ELA DGPY TY GSP+S+GILQ DMWN+TP+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHAGLTASCELAKIDGPYSTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN L
Sbjct: 583 DSLKQDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II E GS+ I IP+++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIAEGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|426195743|gb|EKV45672.1| hypothetical protein AGABI2DRAFT_223838 [Agaricus bisporus var.
bisporus H97]
Length = 868
Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/785 (65%), Positives = 632/785 (80%), Gaps = 20/785 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
+V KR RKE V+FDKIT+R++KL YGL + DPV V QKV GVY+GVTT +LD LA+
Sbjct: 3 FVFKRGIRKERVQFDKITSRIEKLCYGLDTNYVDPVEVTQKVVQGVYQGVTTVELDNLAS 62
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA +T HPDYA+LA R+A+SNLHK TK +FS+ I D+Y+Y N ++GK A +++ + Y
Sbjct: 63 ETAAYLTTKHPDYAVLAARIAISNLHKETKKTFSQVISDLYHYINPKNGKPAGMISKETY 122
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
+++MK+A L+ AIIY RDF+++YFGFKTLERSYLL++++RV ERPQHM+MRV+VGIH +
Sbjct: 123 DVVMKHADTLNSAIIYTRDFNYNYFGFKTLERSYLLRINNRVAERPQHMIMRVAVGIHGE 182
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D D ++TY+LMS+ +FTHA+PTLFNAGTP PQLSSCFL+CMKDDSIEGIYDTLK CA+I
Sbjct: 183 DIDRVMETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIEGIYDTLKSCAMI 242
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK+AGGIGL+IH IRA+GSYI GTNG SNGIVPML+ ++ TARYVDQGG KR GAFAIYL
Sbjct: 243 SKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+F+FLDLRKN GKEE RARDLFYALW+PDLFM+RV +G WSLFCPS+A GL +
Sbjct: 303 EPWHADVFDFLDLRKNHGKEEARARDLFYALWIPDLFMKRVEANGDWSLFCPSEAPGLHE 362
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EFE LY +YE+EGR + + A+KLW+ IL SQIETG P+M++KD N KSNQ+NLG
Sbjct: 363 VWGPEFEALYEKYEKEGRQRKTMPAQKLWYAILESQIETGGPFMVYKDHANSKSNQKNLG 422
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+E+SSP+ETAVCNLAS+ALP ++ N +D
Sbjct: 423 TIKSSNLCTEIIEYSSPDETAVCNLASLALPTFI--------------------NNGKYD 462
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L EV K+ NLN+IIDVN+YPI RRSN+RHRPIGIG+QGLADTF+ L +PF+SP
Sbjct: 463 FQKLHEVAKVAAFNLNRIIDVNYYPIPEARRSNMRHRPIGIGVQGLADTFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA+ LN IFETIY+ AL+AS+E+AV +G YETY GSP+S+G LQ D+W ITP+D WDW+
Sbjct: 523 EAKLLNIQIFETIYHGALEASSEMAVSEGRYETYEGSPVSQGQLQYDLWGITPTDLWDWT 582
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
SL++ I++ G+RNSLLV+PMPTASTSQILGNNECFEPYTSNIYTRRVL+GEF VV LL
Sbjct: 583 SLKQQIARTGIRNSLLVSPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
++L L LW +K II NGSV I IP ++KAIYKTVWEI QK ++D+AADRG +I
Sbjct: 643 RELVGLDLWDDNMKNMIIAHNGSVQNIPNIPADVKAIYKTVWEISQKKVLDLAADRGPFI 702
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
QSQSLN+H++ P G+LTS+HFY W KG+KTGMYYLRTR AA AI+FTVD SVLN K
Sbjct: 703 CQSQSLNVHLQSPTLGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSVLNQAKK 762
Query: 782 NRADN 786
A N
Sbjct: 763 QNASN 767
>gi|121706584|ref|XP_001271554.1| ribonucleotide reductase large subunit RNR1, putative [Aspergillus
clavatus NRRL 1]
gi|119399702|gb|EAW10128.1| ribonucleotide reductase large subunit RNR1, putative [Aspergillus
clavatus NRRL 1]
Length = 859
Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/784 (65%), Positives = 630/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++ A +++ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNNNPAPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+MK+A L+ AI+YDRDF+++YFGFKTLERSYLL++ +V ERPQH+LMRV+VGIH
Sbjct: 121 YEIVMKHADELNSAIVYDRDFNYNYFGFKTLERSYLLRISGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + A++TYHLMSQ +FTHA+PTLFNAGTPQPQL+SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 NDIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLFYALW PDLFM+RV +G W+LFCP++A GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY +YE+EGR + I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGDEFDALYERYEKEGRGRSTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLAS+ALP +V D+ +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFV------------------DAARGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EV +++ NLNKIID+N+YP+ ++SN+RHRPI +G+ GLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDINYYPVPEAKKSNMRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ AL AS ELA + GPYETY GSP+S+GILQ DMW+ TP+D WDW
Sbjct: 523 PEARQLNTQIFETIYHGALTASCELAKQLGPYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+ I+++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN L
Sbjct: 583 DSLKAKIAQSGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II + GSV I IP ++KA+YKTVWEI Q+ ++ MAADRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRNILQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GKLTS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKLTSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|238491914|ref|XP_002377194.1| ribonucleotide reductase large subunit Rnr1, putative [Aspergillus
flavus NRRL3357]
gi|317146285|ref|XP_001821413.2| ribonucleoside-diphosphate reductase large chain [Aspergillus
oryzae RIB40]
gi|220697607|gb|EED53948.1| ribonucleotide reductase large subunit Rnr1, putative [Aspergillus
flavus NRRL3357]
gi|391869144|gb|EIT78349.1| ribonucleotide reductase, alpha subunit [Aspergillus oryzae 3.042]
Length = 854
Score = 1108 bits (2866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/784 (65%), Positives = 629/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++ K A +++ +
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYINPKNKKPAPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+MK+A L+ AI+YDRDF++++FGFKTLERSYLL++D +V ERPQH+LMRVSVGIH
Sbjct: 121 YEIVMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRIDGKVAERPQHLLMRVSVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + A++TYHLMSQ +FTHA+PTLFNAGTPQPQL+SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 NDIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLFYALW PDLFM+RV +G W+LFCP++A GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EGR + I A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYERYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+++P+E AVCNLAS+ALP +V D+ +
Sbjct: 421 GTIRSSNLCTEIIEYTAPDEVAVCNLASLALPTFV------------------DAARGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EV +++ NLNKIID+N+YP+ + SN+RHRPI +G+ GLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDINYYPVPEAKNSNMRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ AL AS++LA G YE+Y GSP+S+GILQ DMW+ TP+D WDW
Sbjct: 523 PEAKQLNTQIFETIYHGALTASSDLAKDFGTYESYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DALKAKIAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II E GSV I IP ++KA+YKTVWEI Q++++ MAADRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPADIKALYKTVWEISQRSILQMAADRGAY 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEALKVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|302498356|ref|XP_003011176.1| hypothetical protein ARB_02698 [Arthroderma benhamiae CBS 112371]
gi|291174724|gb|EFE30536.1| hypothetical protein ARB_02698 [Arthroderma benhamiae CBS 112371]
Length = 870
Score = 1108 bits (2866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/770 (65%), Positives = 622/770 (80%), Gaps = 18/770 (2%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DGRKE V+FDKITAR+ +L YGL EH D + Q+V +GVY+GVTT +LD LAAETAA
Sbjct: 4 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLAAETAAY 63
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
MTV HPDYA+LA R+AVSNLHK TK FS I+D+Y+Y N ++G+ A ++++ EI+MK
Sbjct: 64 MTVTHPDYAILAARIAVSNLHKQTKKQFSSVIEDLYHYVNPKNGRPAPMISEKTREIVMK 123
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSA 186
+A L+ AI+YDRDF++ YFGFKTLERSYLL+ + +V ERPQHM+MRV+VGIH +D +
Sbjct: 124 HAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHGEDVEKV 183
Query: 187 LKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAG 246
++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+ISK+AG
Sbjct: 184 IETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAG 243
Query: 247 GIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHA 306
GIGL++H IRA+GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIYLEPWHA
Sbjct: 244 GIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 303
Query: 307 DIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIE 366
DIFEFLDLRKN GKEE RARDLF ALW PDLFM+RV +G W+LFCP++A GLAD +G E
Sbjct: 304 DIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGEE 363
Query: 367 FEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSS 426
FE LY +YE+EGR + I A+KLW+ IL +Q ETG P+ML+KDSCNRKSNQ+NLGTI+SS
Sbjct: 364 FEALYEKYEKEGRGRTTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNLGTIRSS 423
Query: 427 NLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLA 486
NLCTEIVE+++P+E AVCNLASIALP +V D+ +DF +L
Sbjct: 424 NLCTEIVEYTAPDEVAVCNLASIALPTFV------------------DAVRGEYDFGKLH 465
Query: 487 EVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQL 546
EVT+++ NLN+IID NHYP+E RRSN RHRPI +G+QGLAD F+ L LPF+SPEA+ L
Sbjct: 466 EVTQVVVRNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDSPEAKLL 525
Query: 547 NKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREM 606
N IFET+Y+ AL AS ELA DGPY +Y GSP+S+GILQ DMWN+TP+D WDW L+
Sbjct: 526 NTQIFETLYHAALTASCELAKVDGPYSSYEGSPVSQGILQYDMWNVTPTDLWDWDGLKAE 585
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTE 666
ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN LLKDL +
Sbjct: 586 ISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 645
Query: 667 LGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQS 726
LGLWS +K +II + GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +IDQSQS
Sbjct: 646 LGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAFIDQSQS 705
Query: 727 LNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
LNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 706 LNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQL 755
>gi|432890244|ref|XP_004075435.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Oryzias latipes]
Length = 794
Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/812 (63%), Positives = 649/812 (79%), Gaps = 21/812 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGR+E V FDKIT+R++KL YGL+ E DP + KV G+Y GVTT +LD LA
Sbjct: 2 MYVIKRDGRQERVMFDKITSRIQKLCYGLNSEFVDPAQITMKVIQGLYSGVTTVELDTLA 61
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA +T +PDYA+LA R+AVSNLHK TK FSE ++D+Y+Y N + + +++ +
Sbjct: 62 AEIAATLTTKYPDYAILAARIAVSNLHKETKKVFSEVMEDLYSYVNPLNKCHSPMISKET 121
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+++N L+ AII+DRDF +++FGFKTLERSYLLK++ +V ERPQHMLMRV+VGIH
Sbjct: 122 LDIVLENKDRLNSAIIFDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVAVGIHG 181
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+ D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 182 RNIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 241
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IR++GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 242 ISKSAGGIGVAVSCIRSTGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 301
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+F+FL+L+KN GKEE RARDLFYALW+PDLFM+RV + WSL CP++ GL
Sbjct: 302 LEPWHFDVFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVESNQDWSLMCPNECPGLD 361
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG+EFE LY++YE EGR K V+ A++LW ++ SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 362 ECWGVEFEELYTKYEREGRVKRVVKAQQLWHAVIESQTETGTPYMLYKDACNKKSNQQNL 421
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLASIAL YV + R F
Sbjct: 422 GTIKCSNLCTEIVEYTSHDEVAVCNLASIALNMYV-------------------TPERTF 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LA VTK+I +NLNKIID+N+YP+ +SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 463 DFKKLASVTKVIVKNLNKIIDINYYPVPEAEKSNKRHRPIGIGVQGLADAFILMRYPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LN IFETIYY AL+AS ELA + GPYETY G P+S+G+LQ DMW TP+D WDW
Sbjct: 523 PEAQLLNIQIFETIYYAALEASCELAAELGPYETYDGCPVSRGVLQYDMWEKTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 583 KLLKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLWS +K K+I NGS+ I+EIP +LK +YKTVWEI QKT++ MAADRG +
Sbjct: 643 LKDLTERGLWSEEMKNKLIGNNGSIQDIAEIPNDLKQLYKTVWEISQKTVLKMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRT+ AA+ I+FT++ L +
Sbjct: 703 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLKEGQ 762
Query: 781 ANR-ADNDV-EANLAQVVCSLKNQEECMACGS 810
+++ + D E N A +VCSL+N+++C+ CGS
Sbjct: 763 SSKMPEQDAKERNTAAMVCSLENRDDCLMCGS 794
>gi|336468943|gb|EGO57106.1| ribonucleotide reductase large subunit [Neurospora tetrasperma FGSC
2508]
gi|350288752|gb|EGZ69977.1| ribonucleotide reductase large subunit [Neurospora tetrasperma FGSC
2509]
Length = 920
Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/776 (65%), Positives = 623/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGR+E V+FDKITAR+ +L YGL H DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S I ++YNY N R+GK + ++A DV
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSFVISELYNYVNPRTGKHSPMIAKDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ D AI+YDRDF++ YFGFKTLERSYLLK+D ++ ERPQHM+MRV+VGI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGQIAERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMS FTHA+PTLFNAGTPQPQLSSCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSLKTFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL+IH IRA+GSYI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G+W+L CP + GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEQNGQWTLMCPHECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EG+ + + A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGKGRKTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLAS+AL ++ D +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALSAFI------------------DYENASY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++ NLNKIID+NHYP++ SN+RHRPIG+G+QGLAD F+ L +PF+S
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDINHYPVKEAHNSNMRHRPIGVGVQGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A +LN IFETIY+ AL AS +LA + GPY TY GSP+S+GILQ DMWN+TP++ WDW
Sbjct: 523 DAASKLNIQIFETIYHAALTASCQLAKEQGPYATYEGSPVSQGILQYDMWNVTPTNLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+ I K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 TALKADIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL E+GLWS A+K +II E GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LRDLVEMGLWSDAMKNRIIAEGGSIQNIQSIPNDIKALYKTVWEISQRTIVKMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM +P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEAL 758
>gi|410915398|ref|XP_003971174.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 1 [Takifugu rubripes]
Length = 792
Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/811 (64%), Positives = 650/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT R++KL YGL+ E DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQEAVSFDKITFRVQKLCYGLNSEFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T +PDYA+LA R+AVSNLHK TK FS+ ++D+YNY N + + + +++ +
Sbjct: 61 AETAATLTTKYPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYVNPLNKQHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+++N L+ AIIYDRDF +++FGFKTLERSYLLK + +V ERPQHMLMRV+VGIH+
Sbjct: 121 LDIVLENKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKTNGKVAERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL M++DSIEGIYDTL +CA+
Sbjct: 181 ADIEAAIETYNLLSEKWFTHASPTLFNAGTRKPQLSSCFLLAMREDSIEGIYDTLTQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
+SKSAGGIGL++ IRA+GSYI GTNG SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 VSKSAGGIGLAVSCIRATGSYIAGTNGRSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+F FL+L+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CPS+ GL
Sbjct: 301 LEPWHSDVFAFLELKKNTGKEEQRARDLFFALWIPDLFMKRVESNQDWSLMCPSECPGLI 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE+EGRAK V+ A++LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DCWGEEFEELYTRYEKEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIVE++S +E AVCNLASIAL YV + R +
Sbjct: 421 GTIKSSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPQRTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +LA VTKII NLNKIID+N+YP+ RRSN+RHRPIGIG+QGLAD FIL+ P+ES
Sbjct: 462 DFNKLASVTKIIVRNLNKIIDINYYPVPEARRSNMRHRPIGIGVQGLADAFILMRHPYES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LN IFETIYY AL+AS ELA + GPYETY GSP+SKG+LQ DMW TP+D WDW
Sbjct: 522 PEAQLLNIQIFETIYYAALEASCELAAEFGPYETYAGSPVSKGVLQYDMWGKTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+E I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIYTRRVLSGEF +VN HL
Sbjct: 582 NALKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLWS A+K ++I NGS+ I EIP++LK +YKTVWEI QKT++ MAADRG Y
Sbjct: 642 LKDLTERGLWSDAMKNQLIAHNGSIQDIQEIPDDLKQLYKTVWEISQKTVLKMAADRGAY 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P +GKLTS+HFY W G+KTGMYYLRT+ AA+ I+FT++ L +
Sbjct: 702 IDQSQSLNIHIAEPTYGKLTSMHFYGWKLGLKTGMYYLRTKPAANPIQFTLNREKLKEAQ 761
Query: 781 ANRADNDV-EANLAQVVCSLKNQEECMACGS 810
+ ++ + E N+A +VCSL N++ECM GS
Sbjct: 762 SAKSKEEAKERNMAAMVCSLANKDECMMYGS 792
>gi|5733808|gb|AAD49743.1| ribonucleotide reductase large subunit [Neurospora crassa]
Length = 929
Score = 1107 bits (2864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/776 (65%), Positives = 623/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGR+E V+FDKITAR+ +L YGL H DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S I ++YNY N R+GK + ++A DV
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSLVISELYNYVNPRTGKHSPMIAKDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ D AI+YDRDF++ YFGFKTLERSYLLK+D ++ ERPQHM+MRV+VGI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGQIAERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMS FTHA+PTLFNAGTPQPQLSSCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSLKTFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL+IH IRA+GSYI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G+W+L CP + GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEQNGQWTLMCPHECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EG+ + + A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGKGRKTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLAS+AL ++ D +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALSAFI------------------DYENASY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++ NLNKIID+NHYP++ SN+RHRPIG+G+QGLAD F+ L +PF+S
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDINHYPVKEAHNSNMRHRPIGVGVQGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A +LN IFETIY+ AL AS +LA + GPY TY GSP+S+GILQ DMWN+TP++ WDW
Sbjct: 523 DAASKLNIQIFETIYHAALTASCQLAKEQGPYATYEGSPVSQGILQYDMWNVTPTNLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+ I K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 TALKADIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL E+GLWS A+K +II E GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LRDLVEMGLWSDAMKNRIIAEGGSIQNIQSIPNDIKALYKTVWEISQRTIVKMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM +P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEAL 758
>gi|85081938|ref|XP_956818.1| ribonucleoside-diphosphate reductase large chain [Neurospora crassa
OR74A]
gi|30316299|sp|Q9UW15.2|RIR1_NEUCR RecName: Full=Ribonucleoside-diphosphate reductase large chain;
AltName: Full=Ribonucleotide reductase large subunit
gi|11256439|pir||T51069 ribonucleoside-diphosphate reductase large chain (un-24gene)
[imported] - Neurospora crassa
gi|9368573|emb|CAB98233.1| ribonucleoside-diphosphate reductase large chain (un-24)
[Neurospora crassa]
gi|28917896|gb|EAA27582.1| ribonucleoside-diphosphate reductase large chain [Neurospora crassa
OR74A]
Length = 929
Score = 1107 bits (2864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/776 (65%), Positives = 623/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGR+E V+FDKITAR+ +L YGL H DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S I ++YNY N R+GK + ++A DV
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSLVISELYNYVNPRTGKHSPMIAKDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ D AI+YDRDF++ YFGFKTLERSYLLK+D ++ ERPQHM+MRV+VGI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGQIAERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMS FTHA+PTLFNAGTPQPQLSSCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSLKTFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL+IH IRA+GSYI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G+W+L CP + GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEQNGQWTLMCPHECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EG+ + + A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGKGRKTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLAS+AL ++ D +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALSAFI------------------DYENASY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++ NLNKIID+NHYP++ SN+RHRPIG+G+QGLAD F+ L +PF+S
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDINHYPVKEAHNSNMRHRPIGVGVQGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A +LN IFETIY+ AL AS +LA + GPY TY GSP+S+GILQ DMWN+TP++ WDW
Sbjct: 523 DAASKLNIQIFETIYHAALTASCQLAKEQGPYATYEGSPVSQGILQYDMWNVTPTNLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+ I K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 TALKADIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL E+GLWS A+K +II E GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LRDLVEMGLWSDAMKNRIIAEGGSIQNIQSIPNDIKALYKTVWEISQRTIVKMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM +P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEAL 758
>gi|353029222|gb|ABF71875.2| ribonucleotide reductase large subunit [Neurospora crassa]
Length = 923
Score = 1107 bits (2864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/776 (65%), Positives = 623/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGR+E V+FDKITAR+ +L YGL H DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S I ++YNY N R+GK + ++A DV
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSLVISELYNYVNPRTGKHSPMIAKDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ D AI+YDRDF++ YFGFKTLERSYLLK+D ++ ERPQHM+MRV+VGI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGQIAERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMS FTHA+PTLFNAGTPQPQLSSCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSLKTFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL+IH IRA+GSYI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G+W+L CP + GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEQNGQWTLMCPHECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EG+ + + A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGKGRKTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLAS+AL ++ D +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALSAFI------------------DYENASY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++ NLNKIID+NHYP++ SN+RHRPIG+G+QGLAD F+ L +PF+S
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDINHYPVKEAHNSNMRHRPIGVGVQGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A +LN IFETIY+ AL AS +LA + GPY TY GSP+S+GILQ DMWN+TP++ WDW
Sbjct: 523 DAASKLNIQIFETIYHAALTASCQLAKEQGPYATYEGSPVSQGILQYDMWNVTPTNLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+ I K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 TALKADIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL E+GLWS A+K +II E GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LRDLVEMGLWSDAMKNRIIAEGGSIQNIQSIPNDIKALYKTVWEISQRTIVKMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM +P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEAL 758
>gi|213512716|ref|NP_001133985.1| Ribonucleoside-diphosphate reductase large subunit [Salmo salar]
gi|209156060|gb|ACI34262.1| Ribonucleoside-diphosphate reductase large subunit [Salmo salar]
gi|223648756|gb|ACN11136.1| Ribonucleoside-diphosphate reductase large subunit [Salmo salar]
Length = 792
Score = 1107 bits (2864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/811 (63%), Positives = 648/811 (79%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGREERVMFDKITSRIQKLCYGLNSDFVDPTQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N + + +VA +
Sbjct: 61 AEIAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVVEDLYNYVNPLNRCHSPMVAKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+++N L+ AII+DRDF +++FGFKTLERSYLLK++ +V ERPQHMLMRV+VGIH+
Sbjct: 121 LDIVLENKDRLNSAIIFDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+ ++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 TDIDAVIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+F+FLDL+KN GKEE RARDLFY +W+PDLFM+RV + WSL CPSD GL
Sbjct: 301 LEPWHFDVFDFLDLKKNTGKEEQRARDLFYGMWIPDLFMKRVESNQDWSLMCPSDCPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY++YE+EGR K V+ A+++W I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 ECWGEEFEKLYTRYEQEGRVKRVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIVE++S +E AVCNLASIAL YV + R F
Sbjct: 421 GTIKSSNLCTEIVEYTSHDEVAVCNLASIALNMYV-------------------TPERTF 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +LA VTK+I NLNKII++N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFSKLAYVTKVIVRNLNKIIEINYYPVVEAENSNKRHRPIGIGVQGLADAFILMRFPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ+LN IFETIYY AL++S ELA + G YETY GSP+SKGILQ +MW+ TP+D WDW
Sbjct: 522 AEAQKLNTQIFETIYYAALESSCELAAELGAYETYPGSPVSKGILQYNMWDKTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+E I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 TLLKENIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K ++I +NGS+ I+EIP++LK +YKTVWEI QKT++ MAADRG +
Sbjct: 642 LKDLTERGLWNEEMKNQLIGQNGSIQGIAEIPDDLKELYKTVWEISQKTILKMAADRGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN-NE 779
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRT+ AA+ I+FT++ L ++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLKESQ 761
Query: 780 KANRADNDVEANLAQVVCSLKNQEECMACGS 810
A + E N A +VCSL+N+++C+ CGS
Sbjct: 762 SAKNLEALKELNRAAMVCSLENRDDCLMCGS 792
>gi|260789736|ref|XP_002589901.1| hypothetical protein BRAFLDRAFT_266176 [Branchiostoma floridae]
gi|229275086|gb|EEN45912.1| hypothetical protein BRAFLDRAFT_266176 [Branchiostoma floridae]
Length = 787
Score = 1107 bits (2863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/810 (62%), Positives = 640/810 (79%), Gaps = 23/810 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MYVLKRDGRQEKVHFDKITSRIQKLCYGLNMDFVDPTKITMKVINGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA LA R+A+SNLHK TK +F++ ++D+YN+ N ++ + + +++ +
Sbjct: 61 AETAATMTVKHPDYATLAARIAISNLHKETKKAFTDVMEDLYNWVNPKTNQHSPMISKKL 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ KNA L+ AIIYDRDF + YFG KTLERSYLL++D +V ERPQHMLMRV++GIH
Sbjct: 121 MDLVTKNADRLNSAIIYDRDFKYTYFGIKTLERSYLLRIDGKVAERPQHMLMRVALGIHY 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+LMS+ FTHA+PTLFNAGT +PQLSSCFLL MKDDSI+GIY+TLK+CA+
Sbjct: 181 EDLDAAIETYNLMSEKKFTHASPTLFNAGTNKPQLSSCFLLTMKDDSIDGIYETLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG++IH IRASGS+I GTNG+SNG++PML+VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVNIHKIRASGSFIAGTNGTSNGLLPMLRVFNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLD RKN GKEE RARDLFYA+W+PDLFM+RV ++G+W+L CP + GL
Sbjct: 301 LEPWHADIFEFLDARKNTGKEEQRARDLFYAMWIPDLFMKRVEENGEWTLMCPHECPGLE 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY YE+ G+ + + A+++W+ I+ +Q ETG PYML+KD+CN KSNQQNL
Sbjct: 361 DCWGEEFEKLYEGYEKAGKGRRTVKAQQVWYAIIEAQTETGNPYMLYKDACNSKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++SP+E AVCNLASIA+ YV+ G +
Sbjct: 421 GTIKCSNLCTEIVEYTSPDEVAVCNLASIAVNMYVKPDGT-------------------Y 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L EVT +IT NLNKIIDVN+YP+ SN +HRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFEKLKEVTVVITRNLNKIIDVNYYPVPEAENSNKKHRPIGIGVQGLADCFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY A++AS E+A + GPYETY G P+SKGI Q DMWN+TP+D WDW
Sbjct: 522 EEAQHLNKQIFETIYYGAMQASCEIAKELGPYETYEGCPVSKGIFQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+E + ++GVRNSLL+APMPTAST+QILGNNE E YTSNIYTRRVLSGEF VVN HL
Sbjct: 582 AALKEQVKQHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQVVNHHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+ DLTELGLW+ +K II NGSV I IPE ++ +YKT WEI QKT++ MAADRG +
Sbjct: 642 MTDLTELGLWNEEMKNMIIANNGSVQNIEVIPETIRNLYKTTWEISQKTVIKMAADRGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GK+TS+HFY W G+KTGMYYLRTR A++ I+FTVD S L
Sbjct: 702 IDQSQSLNIHIGEPNYGKITSMHFYGWKLGLKTGMYYLRTRPASNPIQFTVDKSKL---- 757
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
A + E L +VCSL+N++EC+ CGS
Sbjct: 758 AQSTKAEKEKQLEAMVCSLENKDECLMCGS 787
>gi|348672398|gb|EGZ12218.1| hypothetical protein PHYSODRAFT_246827 [Phytophthora sojae]
Length = 788
Score = 1107 bits (2863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/811 (63%), Positives = 653/811 (80%), Gaps = 24/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGR+E V+FDKITAR+ KL YGL+ ++ D + ++QKV AGVY GVTT++LDELA
Sbjct: 1 MYVIKRDGRQEDVKFDKITARITKLCYGLNPDYVDAIKISQKVVAGVYPGVTTSELDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA + HPD++ LA R+AVSNLHK T FS+ I+ + ++++G A L+ADDV
Sbjct: 61 AETAAYQSTQHPDFSKLAARIAVSNLHKNTNKVFSDNIEVFHKNIHEKTGAAAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+M++ L+ AII+DRDF++DYFGFKTLER YL +++ +VVERPQ M+MRV++GIHK
Sbjct: 121 YEIVMQHKDELNSAIIHDRDFEYDYFGFKTLERGYLFRVNGKVVERPQQMIMRVALGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +AL+TY LMSQ +FTHATPTLFNAGTP+PQLSSCFLL M+DDSIEGIYDTLK+CA
Sbjct: 181 SDIKAALETYELMSQKFFTHATPTLFNAGTPRPQLSSCFLLAMQDDSIEGIYDTLKQCAC 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+S+HNIRA+ SYI GTNGSSNGI+PML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 241 ISKWAGGIGISMHNIRATNSYIRGTNGSSNGIIPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN G E RARDLFYALWVPDLFM+RV +GKWSLFCP++A GL
Sbjct: 301 LEPWHADVFEFLDLRKNHGNELHRARDLFYALWVPDLFMKRVEANGKWSLFCPNEAPGLY 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY +YE+EGRA+ I+A++LWF IL++QIETG P+ML+KD+ NRKSNQQNL
Sbjct: 361 ECWGEEFETLYEKYEKEGRARKTINAQQLWFAILDAQIETGVPFMLYKDAANRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLC E++E++SP+E AVCNLAS+ALP++V E+GV F
Sbjct: 421 GTIRSSNLCCEVMEYTSPDEVAVCNLASVALPKFV-EEGV-------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+++L EVTK+IT NLNK+IDVN+YP+ R+SN+RHRPIGIG+QGLAD FIL+ FES
Sbjct: 461 DYQKLYEVTKVITRNLNKVIDVNYYPVAEARKSNMRHRPIGIGVQGLADAFILMNFAFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
EA++LNK IFETIYY A++ S E+A + GPYET+ GSP SKGI Q DMW +TP SD W+
Sbjct: 521 EEARELNKKIFETIYYAAMETSMEIAKELGPYETFQGSPASKGIFQFDMWGVTPSSDLWN 580
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W++L+E + K+G+RNSLLVAPMPTAST+QILGNNE EPYTSN+Y RRVL+GEF +VNK+
Sbjct: 581 WAALKENVIKHGLRNSLLVAPMPTASTAQILGNNESIEPYTSNMYNRRVLAGEFTIVNKY 640
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
L+K+L ELG+W+ ++ +I+ + GSV K+ IP+ +K YKTVWEIKQK ++D++ADRG
Sbjct: 641 LMKELIELGIWTPDVRNQILNDGGSVQKVKAIPDHVKEKYKTVWEIKQKAVLDLSADRGA 700
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YI QSQSLNIH+ P KLTS+HFYAW KG+KTGMYY+R R ADAIKFTVD L+ +
Sbjct: 701 YICQSQSLNIHIADPTISKLTSMHFYAWKKGLKTGMYYMRGRPKADAIKFTVDKQGLDLQ 760
Query: 780 KANRADNDVEANLAQVVCSLKNQEECMACGS 810
A A +A+ + +++EC+ CG+
Sbjct: 761 PATPAPAPQTETVAR---AGDDEDECLVCGA 788
>gi|119501198|ref|XP_001267356.1| ribonucleotide reductase large subunit RNR1, putative [Neosartorya
fischeri NRRL 181]
gi|119415521|gb|EAW25459.1| ribonucleotide reductase large subunit RNR1, putative [Neosartorya
fischeri NRRL 181]
Length = 859
Score = 1107 bits (2862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/784 (65%), Positives = 632/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++ + A +++ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNKQPAPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+MK+A L+ AI+YDRDF++++FGFKTLERSYLL+++ +V ERPQH+LMRV+VGIH
Sbjct: 121 YEIVMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
++ + A++TYHLMSQ +FTHA+PTLFNAGTPQPQL+SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 NNIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLFYALW PDLFM+RV +G W+LFCP++A GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVESNGDWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY QYE+EGR + I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGDEFDALYEQYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLAS+ALP +V D+ +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFV------------------DAARGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EV +++ NLNKIIDVN+YP+ ++SN+RHRPI +G+ GLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDVNYYPVPEAKKSNMRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+QLN IFETIY+ AL AS ELA + GPYETY GSP+S+GILQ DMW+ TP+D WDW
Sbjct: 523 AEARQLNIQIFETIYHGALTASCELAKEFGPYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+ I+++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DSLKTKIAQHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II + GSV I IP ++KA+YKTVWEI Q+T++ MAADRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRTILQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GKLTS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKLTSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|315056831|ref|XP_003177790.1| ribonucleoside-diphosphate reductase large subunit [Arthroderma
gypseum CBS 118893]
gi|311339636|gb|EFQ98838.1| ribonucleoside-diphosphate reductase large subunit [Arthroderma
gypseum CBS 118893]
Length = 870
Score = 1107 bits (2862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/784 (65%), Positives = 626/784 (79%), Gaps = 18/784 (2%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DGRKE V+FDKITAR+ +L YGL EH D + Q+V +GVY+GVTT +LD LAAETAA
Sbjct: 4 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLAAETAAY 63
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++G+ A ++++ EI+MK
Sbjct: 64 MTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYVNPKNGRPAPMISEKTREIVMK 123
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSA 186
+A L+ AI+YDRDF++ YFGFKTLERSYLL+ + +V ERPQHM+MRV+VGIH +D +
Sbjct: 124 HAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHGEDVEKV 183
Query: 187 LKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAG 246
++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+ISK+AG
Sbjct: 184 IETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAG 243
Query: 247 GIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHA 306
GIGL++H IRA+GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIYLEPWHA
Sbjct: 244 GIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 303
Query: 307 DIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIE 366
DIFEFLDLRKN GKEE RARDLF ALW PDLFM+RV +G W+LFCP++A GLAD +G E
Sbjct: 304 DIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGEE 363
Query: 367 FEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSS 426
FE LY +YE++GR + I A+KLW+ IL +Q ETG P+ML+KDSCNRKSNQ+NLGTI+SS
Sbjct: 364 FEALYEKYEKDGRGRSTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNLGTIRSS 423
Query: 427 NLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLA 486
NLCTEIVE+++P+E AVCNLASIALP +V D+ +DF +L
Sbjct: 424 NLCTEIVEYTAPDEVAVCNLASIALPTFV------------------DAVRGEYDFGKLH 465
Query: 487 EVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQL 546
EVT+++ NLN+IID NHYP+E RRSN RHRPI +G+QGLAD F+ L LPF+SPEA+ L
Sbjct: 466 EVTQVVVRNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDSPEAKLL 525
Query: 547 NKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREM 606
N IFET+Y+ AL AS ELA DGPY +Y GSP+S+GILQ DMWN+TP+D WDW SL+
Sbjct: 526 NIQIFETLYHAALTASCELAKADGPYSSYEGSPVSQGILQYDMWNVTPTDLWDWDSLKSD 585
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTE 666
ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN LLKDL +
Sbjct: 586 ISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 645
Query: 667 LGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQS 726
LGLWS +K +II + GS+ + IP ++KA+YKTVWEI Q+T+V MAADRG +IDQSQS
Sbjct: 646 LGLWSDNMKNRIIADGGSIQNVPNIPADIKALYKTVWEISQRTIVQMAADRGAFIDQSQS 705
Query: 727 LNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADN 786
LNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L N A
Sbjct: 706 LNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLKIVDTNVART 765
Query: 787 DVEA 790
+ A
Sbjct: 766 NASA 769
>gi|149719333|ref|XP_001499936.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Equus caballus]
Length = 792
Score = 1107 bits (2862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/811 (64%), Positives = 651/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKPT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIH
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHS 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVESNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMFV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFQKLAEVTKVIVRNLNKIIDINYYPIPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +L+ +DGPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLSREDGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIQEIPDDLKQLYKTVWEISQKTILKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 762 KASKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|308798579|ref|XP_003074069.1| RIR1_BRARE Ribonucleoside-diphosphate reductase large subunit (ISS)
[Ostreococcus tauri]
gi|116000241|emb|CAL49921.1| RIR1_BRARE Ribonucleoside-diphosphate reductase large subunit (ISS)
[Ostreococcus tauri]
Length = 840
Score = 1106 bits (2861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/851 (64%), Positives = 653/851 (76%), Gaps = 55/851 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPV--------------LVAQKVCAG 46
+YV+KRDGR+EPV FDKITAR+KKL+YGLS+E CDPV +VAQKVC G
Sbjct: 4 LYVVKRDGREEPVAFDKITARIKKLAYGLSQEFCDPVRTDHGRLHLPHSQVIVAQKVCMG 63
Query: 47 VYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYN 106
V+ GVTT +LDELAAETAA+MT HPDYALLA R++VSNLHK T SFSET+K MY + N
Sbjct: 64 VFAGVTTKELDELAAETAASMTSKHPDYALLAARISVSNLHKTTVKSFSETMKVMYEHVN 123
Query: 107 KRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVER 166
KR+GK + L+ADDVYEIIM NA LD ++YDRDFD+DYFGFKTLERSYLL++D +VVER
Sbjct: 124 KRNGKWSPLLADDVYEIIMANAEKLDAELVYDRDFDYDYFGFKTLERSYLLRIDGKVVER 183
Query: 167 PQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDD 226
PQH+LMRVS+GIHK D + A+ TYH++S+ W THA+PTLFNAGTP+PQLSSCFL+CMK+D
Sbjct: 184 PQHLLMRVSIGIHKTDIEKAIDTYHMLSERWMTHASPTLFNAGTPRPQLSSCFLICMKED 243
Query: 227 SIEGIYDTLKKCAIISKSAGGIGLSIH--NIRASGSYIHGTNGSSNGIVPMLQVFNDTAR 284
SIEGIYDTLK+CA ISKSAGGI L+ R + S+ S+ + +V +AR
Sbjct: 244 SIEGIYDTLKECACISKSAGGIALTFEAPTERRTASF-RCCVCSTTRLATWTKVVV-SAR 301
Query: 285 YVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRD 344
V IYLEPWHADIF++LDLRKN GKEE RARDLFY LW DLFM+RV
Sbjct: 302 NV-----------RIYLEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMKRVEA 350
Query: 345 DGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPY 404
+G+W+L CP++ GL+D WG EFE LY +YE EG+ K I A++LWF IL SQ+ETG PY
Sbjct: 351 NGEWTLMCPNECPGLSDCWGEEFETLYEKYEAEGKGKKTIKAQQLWFAILESQVETGNPY 410
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREK--GVPV 462
MLFKD+CNRKSNQQNLGTIKSSNLCTEIVE++SP+ETAVCNLASIALPR+V E P
Sbjct: 411 MLFKDACNRKSNQQNLGTIKSSNLCTEIVEYTSPDETAVCNLASIALPRFVIENNPSSPT 470
Query: 463 -QSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIG 521
++ KLVGS SK R FD +L E+T+ +T NLN+IIDVN+YP+E + SN+RHRPIG
Sbjct: 471 GRTETKKLVGSLKSKERFFDHSKLFEITRKVTRNLNRIIDVNYYPVEAAKNSNMRHRPIG 530
Query: 522 IGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMS 581
+G+QGLAD FILLGLPF+SPEAQ+LN +IFETIY+ AL S LAV +GPY TY GSP+S
Sbjct: 531 LGVQGLADVFILLGLPFDSPEAQKLNAEIFETIYFAALTESNALAVAEGPYSTYEGSPVS 590
Query: 582 KGILQVDMWNITP---SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
KG+LQ DMW +T +R DW+ LR I+++GVRNSLLVAPMPTASTSQILGNNECFEP
Sbjct: 591 KGVLQPDMWGLTEMPGGNRHDWAGLRASIAQHGVRNSLLVAPMPTASTSQILGNNECFEP 650
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
YTSNIY RRVLSGEF VVN+HLL DLTELGLW LK ++I NGSV + +IP+ LK I
Sbjct: 651 YTSNIYARRVLSGEFTVVNQHLLSDLTELGLWDPELKNELISNNGSVQDL-DIPDNLKNI 709
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
YKTVWEIKQ+ LVDMAADRG +IDQSQS N+HM P+ GKLTSLHFYAW KG+KTGMYYL
Sbjct: 710 YKTVWEIKQRVLVDMAADRGAFIDQSQSFNVHMSDPNSGKLTSLHFYAWKKGLKTGMYYL 769
Query: 759 RTRAAADAIKFTVDT----SVLNNEKANRA--------------DNDVEANL-AQVVCSL 799
R+RAAADAIKFTVD S +N E A D + EA L A++ CSL
Sbjct: 770 RSRAAADAIKFTVDATKTKSKVNKENEAPASPRKPTKADLEKMTDEEKEAYLAAKLQCSL 829
Query: 800 KNQEECMACGS 810
+N+++C+ CGS
Sbjct: 830 QNRDDCVMCGS 840
>gi|70994760|ref|XP_752157.1| ribonucleotide reductase large subunit Rnr1 [Aspergillus fumigatus
Af293]
gi|66849791|gb|EAL90119.1| ribonucleotide reductase large subunit Rnr1, putative [Aspergillus
fumigatus Af293]
gi|159124928|gb|EDP50045.1| ribonucleotide reductase large subunit RNR1, putative [Aspergillus
fumigatus A1163]
Length = 859
Score = 1106 bits (2861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/784 (65%), Positives = 632/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++ + A +++ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNKQPAPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+MK+A L+ AI+YDRDF++++FGFKTLERSYLL+++ +V ERPQH+LMRV+VGIH
Sbjct: 121 YEIVMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
++ + A++TYHLMSQ +FTHA+PTLFNAGTPQPQL+SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 NNIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFYALW PDLFM+RV +G W+LFCP++A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVESNGDWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY +YE+EGR + I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGDEFDALYERYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLAS+ALP +V D+ +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFV------------------DAARGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EV +++ NLNKIIDVN+YP+ ++SN+RHRPI +G+ GLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDVNYYPVPEAKKSNMRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+QLN IFETIY+ AL AS ELA + GPYETY GSP+S+GILQ DMW+ TP+D WDW
Sbjct: 523 AEARQLNIQIFETIYHGALTASCELAKEFGPYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+ I+++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DSLKAKIAQHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II + GSV I IP ++KA+YKTVWEI Q+T++ MAADRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRTILQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GKLTS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKLTSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|348538826|ref|XP_003456891.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Oreochromis niloticus]
Length = 793
Score = 1106 bits (2860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/812 (63%), Positives = 653/812 (80%), Gaps = 21/812 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRREAVSFDKITSRVQKLCYGLNSDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N + + + +++ +
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPLNKRHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++++N A L+ +IIYDRDF +++FGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDVVLENKARLNSSIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQ+SSCFLL M DDSI+GIYDTLK+CA+
Sbjct: 181 GDIDAAIETYNLLSEKWFTHASPTLFNAGTNKPQMSSCFLLAMMDDSIDGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLAVSCIRATGSYIAGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+FEFL+L+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CPS+ GL
Sbjct: 301 LEPWHFDVFEFLELKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPSECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY++YE+EGRAK V+ A++LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 ECWGEEFEELYTRYEKEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIVE++S +E AVCNLASIAL YV + + +
Sbjct: 421 GTIKSSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPEKTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LA VTK+I +NLNKIID+N+YP+ RSN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLASVTKVIVKNLNKIIDINYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LN IFETIYY AL+AS ELA + GPYETY GSP+SKGILQ +MWN TP+D WDW
Sbjct: 522 PEAQLLNIQIFETIYYAALEASCELAAELGPYETYPGSPVSKGILQYEMWNKTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KVLKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K ++I NGS+ I +IP++LK +YKTVWEI QKT++ MAADRG Y
Sbjct: 642 LKDLTERGLWNEDMKNQLIAHNGSIQNIDDIPDDLKQLYKTVWEISQKTVLKMAADRGTY 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKL+S+HFY W G+KTGMYYLRT+ AA+ I+FT++ L +
Sbjct: 702 IDQSQSLNIHIAEPNYGKLSSMHFYGWKLGLKTGMYYLRTKPAANPIQFTLNKEKLKEAQ 761
Query: 781 ANRA--DNDVEANLAQVVCSLKNQEECMACGS 810
+ ++ + E N A +VCSL N++EC+ CGS
Sbjct: 762 SAKSVEEETRERNTAAMVCSLANKDECLMCGS 793
>gi|42490975|gb|AAH66217.1| Ribonucleotide reductase M1 [Mus musculus]
Length = 792
Score = 1105 bits (2859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/811 (64%), Positives = 649/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +G+ + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVASST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+M N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVMANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+LAEVTK+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFEKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS ELA + GPYETY GSP+SKGILQ DMWN+ P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KPLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK + KTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLCKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + + A +VCSL+N+EEC+ CGS
Sbjct: 762 KALKEEEEKERDTAAMVCSLENREECLMCGS 792
>gi|170088813|ref|XP_001875629.1| ribonucleotide reductase alpha subunit [Laccaria bicolor S238N-H82]
gi|164648889|gb|EDR13131.1| ribonucleotide reductase alpha subunit [Laccaria bicolor S238N-H82]
Length = 881
Score = 1105 bits (2859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/784 (65%), Positives = 629/784 (80%), Gaps = 20/784 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
+V KR RKE V+FDKITAR++KL YGL++ DP+ QKV AGVY GVTT +LD LAA
Sbjct: 3 FVFKRGARKERVQFDKITARIQKLCYGLNENFVDPIEFTQKVVAGVYHGVTTVELDNLAA 62
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA +T HPDYA+LA R+AVSNLHK TK +FS+ IKD+Y Y N ++ + A +++ ++Y
Sbjct: 63 ETAAYLTTKHPDYAVLAARIAVSNLHKETKKNFSQVIKDLYEYVNPKNRRPAGMISQEIY 122
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
EI+ +NA LD AIIY+RDF F++FGFKTLERSYLL+++ RV ERPQHM+MRV+VGIH
Sbjct: 123 EIVRENAEALDSAIIYNRDFSFNFFGFKTLERSYLLRLNGRVAERPQHMIMRVAVGIHGR 182
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D D ++TY+LMS+ +FTHA+PTLFNAGTP PQLSSCFL+CMKDDSIEGIYDTLK CA+I
Sbjct: 183 DIDRVVETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIEGIYDTLKNCAMI 242
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK+AGGIGLSIH IRA+GSYI GTNG SNGIVPML+ ++ TARYVDQGG KR GAFAIY+
Sbjct: 243 SKTAGGIGLSIHCIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+FEFLDLRKN GKEE RARDLFYALW+PDLFM+RV +G WSLFCP++A+GL +
Sbjct: 303 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANGDWSLFCPNEAAGLGE 362
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
EFE LY +YE+EGRA+ I A+KLW+ IL +QIETG P+M++KD N KSNQ+NLG
Sbjct: 363 VHSAEFEALYEKYEKEGRARKSIPAQKLWYAILEAQIETGGPFMVYKDHANSKSNQKNLG 422
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+E+SSPEETAVCNLAS+ALP ++ N +D
Sbjct: 423 TIKSSNLCTEIIEYSSPEETAVCNLASLALPTFI--------------------SNGKYD 462
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L +VTK++ NLN+IIDVN+YPI R SN+RHRPIG+G+QGLADTF+ L +PF+SP
Sbjct: 463 FQKLHDVTKVVAYNLNRIIDVNYYPIPEARLSNMRHRPIGVGVQGLADTFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
A++LN IFETIY+ AL+AS+ELA +DGPYET+ GSP G LQ D+W +TP+ WDW+
Sbjct: 523 AAKELNIQIFETIYHGALEASSELAERDGPYETWMGSPAQLGQLQYDLWGVTPTGLWDWT 582
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
SL+E I++ G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL+GEF VV LL
Sbjct: 583 SLKEKIARTGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
++L +LGLW +K II NGSV I IP+++KAIYKTVWEI QK ++D+AADRG +I
Sbjct: 643 RELVDLGLWDDNMKNMIIAHNGSVQNIPTIPDDVKAIYKTVWEISQKKVLDLAADRGAFI 702
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
QSQSLN+H++ P G+LTS+HFY W KG+KTGMYYLRTR AA AI+FTVD S+L K
Sbjct: 703 CQSQSLNVHLQAPTLGQLTSMHFYGWKKGLKTGMYYLRTRPAASAIQFTVDQSLLKEVKQ 762
Query: 782 NRAD 785
+ D
Sbjct: 763 QKTD 766
>gi|72084113|ref|XP_780425.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Strongylocentrotus purpuratus]
Length = 797
Score = 1105 bits (2858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/813 (64%), Positives = 647/813 (79%), Gaps = 24/813 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV KRDGRKE V FDKIT+R+++L Y L+ + DP ++ KV +GVY GVTT +LD LAA
Sbjct: 5 YVQKRDGRKEIVMFDKITSRIQRLCYNLNSDFIDPAVITMKVISGVYPGVTTVELDTLAA 64
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA MT HPDYA+LA R+AVSNLHK TK FS +KD++ Y N R+G + L++++
Sbjct: 65 ETAATMTTKHPDYAVLAARIAVSNLHKETKKLFSAVMKDLFEYTNPRNGLHSPLISEETM 124
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
II NA L+ A++YDRDF+++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIH
Sbjct: 125 MIINDNADRLNSAVLYDRDFEYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHGK 184
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D D+A++TY+L+S WFTHA+PTLFNAGT +PQLSSCFLL MKDDSI+GIY+TLK CA+I
Sbjct: 185 DIDAAIQTYNLLSDRWFTHASPTLFNAGTNRPQLSSCFLLTMKDDSIDGIYETLKNCALI 244
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK+AGGIGL+IHNIRASGSYI GTNG+SNG++PML+V+N+TARYVDQGG KR GAFAIYL
Sbjct: 245 SKTAGGIGLNIHNIRASGSYIAGTNGNSNGLLPMLRVYNNTARYVDQGGNKRPGAFAIYL 304
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHADIF+FLD +KN GKEE RARDLFY LW+PDLFM+RV DG W+L CP ++ GL +
Sbjct: 305 EPWHADIFDFLDCKKNHGKEEQRARDLFYGLWIPDLFMKRVEADGDWTLMCPHESPGLHE 364
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EFE LY YE+ GR + I A+ LW+ I+ SQ ETGTPYM++KD CN+KSNQQNLG
Sbjct: 365 VWGEEFETLYEGYEKAGRGRKTIKAQALWYAIIESQTETGTPYMVYKDHCNKKSNQQNLG 424
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIK SNLCTEIVE+SS +E AVCNLASIALPR+V++ R FD
Sbjct: 425 TIKCSNLCTEIVEYSSADEVAVCNLASIALPRFVQD--------------------RTFD 464
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L EVT +ITENLNKIID+N+YP+ +RSN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 465 FKKLEEVTMVITENLNKIIDINYYPVPEAKRSNFRHRPIGIGVQGLADAFILMRFPFESV 524
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA++LN IFETIYY ALKAS ++A K GPYETY GSP+SKGILQ DMW +TP+D DW+
Sbjct: 525 EAKKLNIQIFETIYYAALKASCKIAAKLGPYETYKGSPVSKGILQQDMWGVTPTDLHDWA 584
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
SL+ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HLL
Sbjct: 585 SLKADIAKHGVRNSLLLAPMPTASTAQILGNNEAIEPYTSNIYTRRVLSGEFQVVNHHLL 644
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
+DLT++GLWS +K +I NGS+ I IP+++KA+YKTVWEI QKT++ MA DRG YI
Sbjct: 645 RDLTDMGLWSDEMKNNLIANNGSIQNIPTIPDDIKALYKTVWEISQKTIIQMAVDRGAYI 704
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE-- 779
DQSQSLNIH+ +P++GKLTS+HF+AW G+KTGMYYLRTR AAD IKFT+D L +
Sbjct: 705 DQSQSLNIHIAEPNYGKLTSMHFFAWKSGLKTGMYYLRTRPAADPIKFTLDKLSLKEKSG 764
Query: 780 -KANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
K A+ A N A ++CSL+N++ C++CGS
Sbjct: 765 AKLTEAEEKERAKNEAAMMCSLENKDACVSCGS 797
>gi|336370235|gb|EGN98576.1| hypothetical protein SERLA73DRAFT_92011 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382991|gb|EGO24141.1| hypothetical protein SERLADRAFT_450431 [Serpula lacrymans var.
lacrymans S7.9]
Length = 889
Score = 1105 bits (2858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/784 (64%), Positives = 636/784 (81%), Gaps = 20/784 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
+V KR RKE V+FDKITAR+ KL YGL ++ DP+ + QKV AGVY+GVTT +LD LAA
Sbjct: 3 FVFKRGSRKERVQFDKITARINKLCYGLDVDYVDPIEITQKVIAGVYQGVTTVELDNLAA 62
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA +T HPDYA+LA R+A+SNLHK TK +FS+ +KD+Y Y N ++G+ AS+++ + Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAISNLHKETKKNFSQVVKDLYEYINPKNGRAASMISKETY 122
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
E++ +A LD AIIYDRDF +++FGFKTLERSYLL++++RV ERPQHM+MRV+VGIH
Sbjct: 123 EVVQAHAETLDSAIIYDRDFHYNFFGFKTLERSYLLRINNRVAERPQHMIMRVAVGIHGS 182
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D D L+TYHLMS+ +FTHA+PTLFNAGTP PQLSSCFL+CMKDDSIEGIYDTLK CA+I
Sbjct: 183 DIDRVLETYHLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIEGIYDTLKNCAMI 242
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK+AGGIGL+IH IRA+GSYI GTNG SNGIVPML+ ++ TARYVDQGG KR GAFAIYL
Sbjct: 243 SKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWH DIF+F+DLRKN GKEE RARDLFYALW+PDLFM+RV +G+WSLFCP++A L +
Sbjct: 303 EPWHNDIFDFIDLRKNHGKEESRARDLFYALWIPDLFMKRVEANGEWSLFCPNEAPNLHE 362
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
+G EFE LY +YE+EGR++ I A+KLW+ IL +QIETG P+M +KD+ NRKSNQ+NLG
Sbjct: 363 VYGEEFEALYEKYEKEGRSRRTIPAQKLWYAILEAQIETGGPFMCYKDAANRKSNQKNLG 422
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+E+SSP+ETAVCNLAS+ALP ++ N +D
Sbjct: 423 TIKSSNLCTEIIEYSSPDETAVCNLASMALPSFI--------------------VNGKYD 462
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L +V K+IT+NLN+IIDVN+YP RRSN+RHRPIG+G+QGLAD F+ L +PF+SP
Sbjct: 463 FQKLHDVAKVITKNLNRIIDVNYYPTPEARRSNMRHRPIGVGVQGLADAFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA++LN IFETIY+ AL++S+ELA K+GPYET+ GSP +G LQ D+W +TP+D WDW+
Sbjct: 523 EAKELNIQIFETIYHAALESSSELAEKEGPYETWKGSPAEQGQLQFDLWGVTPTDLWDWT 582
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
SL+E I++ G+RNSLL+APMPTASTSQILG NECFEPYTSNIYTRRVL+GEF +V LL
Sbjct: 583 SLKERIARTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQIVCPWLL 642
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
++L +LGLW+ +K II NGS+ I IPE++KAIYKTVWEI QK ++D+AADRG +I
Sbjct: 643 RELVDLGLWNDQMKNMIIANNGSIQSIIGIPEDVKAIYKTVWEISQKKVIDLAADRGAFI 702
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
QSQSLNIH++ P G+LTS+HFY W KG+KTGMYY+RTR AA AI+FTVD S + + +
Sbjct: 703 CQSQSLNIHLQSPTLGQLTSMHFYGWKKGLKTGMYYMRTRPAAQAIQFTVDQSFIKDAQK 762
Query: 782 NRAD 785
N+ +
Sbjct: 763 NKQN 766
>gi|295659650|ref|XP_002790383.1| ribonucleoside-diphosphate reductase large chain [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226281835|gb|EEH37401.1| ribonucleoside-diphosphate reductase large chain [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 878
Score = 1105 bits (2858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/784 (64%), Positives = 626/784 (79%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y+N ++ + A +++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNRRPAPMISQST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+M++A + AI+YDRDF++ YFGFKTLERSYLL+++ +V ERPQHM+MRV++GIH
Sbjct: 121 YEIVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IR +GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDLRKN GKEE RARDLF ALW PDLFM+RV +G+W+LFCP++A GLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EGR K I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ SP+E AVCNLASIALP +V D+ +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFV------------------DAVRGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVT+++ NLN+IID N+YP+E +RSN RHRPI G+QGLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVTQVVVRNLNRIIDRNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+ LN IFETIY+ L AS ELA DGPY +Y GSP+S+GILQ DMW +TP+D WDW
Sbjct: 523 PEAKLLNIQIFETIYHACLTASCELAKVDGPYSSYEGSPVSQGILQYDMWGVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN L
Sbjct: 583 DSLKQEIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II + GS+ I IP+++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLKVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|328864042|gb|EGG13141.1| hypothetical protein MELLADRAFT_41450 [Melampsora larici-populina
98AG31]
Length = 871
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/771 (65%), Positives = 627/771 (81%), Gaps = 20/771 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
+V KRDGR+E V FDKITAR+ KL YGL H +P+ + +KV GV+ GVTT +LD LAA
Sbjct: 3 FVYKRDGRRERVAFDKITARINKLCYGLDNVHVEPIEITKKVINGVFNGVTTVELDNLAA 62
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA MT HPDYA+LA R+A+SNLHK TK FS+ I+D+Y Y N ++G+ + +++D+ Y
Sbjct: 63 ETAAYMTTRHPDYAVLAARIAISNLHKETKKLFSQVIEDLYRYVNPKNGRPSPMISDETY 122
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
E + NA L+ A+IYDRDF+++YFGFKTLERSYLL++D++V ERPQHMLMRV+VGIH
Sbjct: 123 EAVQANAEALNSAVIYDRDFNYNYFGFKTLERSYLLRIDNKVAERPQHMLMRVAVGIHGT 182
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D D A++TY+LMS+ +FTHA+PTLFN+GTP PQLSSCFL+ MK DSI+GIYDTLK CA+I
Sbjct: 183 DVDRAIRTYNLMSEKYFTHASPTLFNSGTPHPQLSSCFLVSMKSDSIDGIYDTLKTCAMI 242
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK+AGGIGL+IH+IRA+GSYI GTNG SNGIVPML+VFN+TARYVDQGG KR GAFAIY+
Sbjct: 243 SKTAGGIGLNIHDIRATGSYIAGTNGYSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+F++LDLRKN GKEE RARDLFYALW+PDLFM+RV D+G W LFCP++A GL+D
Sbjct: 303 EPWHADVFDWLDLRKNHGKEESRARDLFYALWIPDLFMQRVEDNGDWPLFCPAEAPGLSD 362
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
+G FE L+ QYE+EGRAK + A+KLW+ IL +Q ETG P+ML+KD+ NRKSNQ+NLG
Sbjct: 363 VYGEAFEKLFDQYEKEGRAKKTVKAQKLWYAILEAQTETGNPFMLYKDAANRKSNQKNLG 422
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+E+S+P+E AVCNLASIALP Y+ + GV +D
Sbjct: 423 TIKSSNLCTEIIEYSAPDEVAVCNLASIALPTYITD-GV-------------------YD 462
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L EVTK +T NLN+IIDVN+YP+ ++SN+RHRPIGIG+ GLAD F +L LPF+SP
Sbjct: 463 FQKLHEVTKEVTWNLNRIIDVNYYPVPEAKKSNMRHRPIGIGVNGLADAFQILKLPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA++LN IFET+Y+ AL+AS ELAV +G YET+ GSP S G LQ DMW +TPSD W W
Sbjct: 523 EAKKLNAQIFETLYHAALEASNELAVAEGAYETFPGSPASLGELQYDMWGVTPSDLWKWD 582
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
L+E I G+RNSLL+APMPTASTSQI+G NECFEPYTSNIYTRRVL+GEF +VN LL
Sbjct: 583 DLKERIKATGLRNSLLLAPMPTASTSQIMGFNECFEPYTSNIYTRRVLAGEFQIVNPWLL 642
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
K+L E+GLW+ +K +II GS+ I +IP ++KA+YKTVWEI QK ++D+AADRG +I
Sbjct: 643 KELVEMGLWNDEMKNRIIAHQGSIQNIPDIPTKMKAVYKTVWEISQKVIIDLAADRGAFI 702
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
DQSQSLNIH++ P G+LTS+HFYAW KG+KTGMYYLRTRAAA+AI+FTVD
Sbjct: 703 DQSQSLNIHLQAPTFGQLTSMHFYAWKKGLKTGMYYLRTRAAANAIQFTVD 753
>gi|114635715|ref|XP_001160029.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 4 [Pan troglodytes]
gi|397465790|ref|XP_003804664.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Pan paniscus]
gi|410214658|gb|JAA04548.1| ribonucleotide reductase M1 [Pan troglodytes]
gi|410262940|gb|JAA19436.1| ribonucleotide reductase M1 [Pan troglodytes]
gi|410303308|gb|JAA30254.1| ribonucleotide reductase M1 [Pan troglodytes]
gi|410337287|gb|JAA37590.1| ribonucleotide reductase M1 [Pan troglodytes]
Length = 792
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/811 (64%), Positives = 650/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK++ NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|4506749|ref|NP_001024.1| ribonucleoside-diphosphate reductase large subunit [Homo sapiens]
gi|132608|sp|P23921.1|RIR1_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase
subunit M1; AltName: Full=Ribonucleotide reductase large
subunit
gi|323714413|pdb|3HNC|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp
gi|323714414|pdb|3HNC|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp
gi|323714415|pdb|3HND|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp And Substrate Gdp
gi|323714416|pdb|3HND|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp And Substrate Gdp
gi|323714417|pdb|3HNE|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Atp
gi|323714418|pdb|3HNE|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Atp
gi|323714419|pdb|3HNF|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Datp
gi|323714420|pdb|3HNF|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Datp
gi|36065|emb|CAA42118.1| M1 subunit of ribonucleotide reductase [Homo sapiens]
gi|36153|emb|CAA42180.1| large subunit ribonucleotide reductase [Homo sapiens]
gi|13676332|gb|AAH06498.1| Ribonucleotide reductase M1 [Homo sapiens]
gi|119622988|gb|EAX02583.1| ribonucleotide reductase M1 polypeptide [Homo sapiens]
gi|123991808|gb|ABM83954.1| ribonucleotide reductase M1 polypeptide [synthetic construct]
gi|123999422|gb|ABM87271.1| ribonucleotide reductase M1 polypeptide [synthetic construct]
Length = 792
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/811 (64%), Positives = 650/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK++ NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|388582671|gb|EIM22975.1| hypothetical protein WALSEDRAFT_31633 [Wallemia sebi CBS 633.66]
Length = 888
Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/783 (64%), Positives = 625/783 (79%), Gaps = 20/783 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KRDGRKE V FDKITAR+ KL YGL H DP+ + +KV GV++G+TT +LD LA
Sbjct: 4 MTVFKRDGRKESVAFDKITARINKLCYGLDSNHVDPIEITKKVVQGVHQGITTVELDNLA 63
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +TV HPDYA+LA R+A+SNLHK TK +FS I+D+YNY N R+GK +++D+
Sbjct: 64 AETAAYLTVKHPDYAVLAARIAISNLHKETKKAFSAVIEDLYNYVNPRNGKPGPMISDET 123
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+MKN LD AI+YDRDF++++FGFKTLERSYLL+++ +V ERPQHMLMRV+VGIH
Sbjct: 124 YQIVMKNRNVLDSAILYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 183
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D + ++TY+LMS FTHA+PTLFNAGTP PQ+SSCFL+ M+DDSIEGIYDTLK CA+
Sbjct: 184 SDLERVIETYNLMSLKAFTHASPTLFNAGTPHPQMSSCFLVTMQDDSIEGIYDTLKSCAL 243
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IRA+GSYI GTNGSSNGIVPML+ F+ TARYVDQGG KR GAFAIY
Sbjct: 244 ISKTAGGIGLNIHCIRATGSYIAGTNGSSNGIVPMLRAFDATARYVDQGGNKRPGAFAIY 303
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+FEFLDLRKN GKEE RARDLFYALW+PDLFM+RV+++G W LFCP +A GL
Sbjct: 304 LEPWHPDVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMQRVQENGDWPLFCPHEAPGLH 363
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE L+ +YE EGRAK V+ A+KLW+ IL+SQ+ETG P+ML+KD N KSNQQNL
Sbjct: 364 EVWGKEFEELFFKYEREGRAKRVVKAQKLWYSILDSQVETGGPFMLYKDHANAKSNQQNL 423
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK+SNLCTEI+E+S+P+E AVCNLASIALP Y+ KN F
Sbjct: 424 GTIKNSNLCTEIIEYSAPDEVAVCNLASIALPSYI--------------------KNGQF 463
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF L +VTK++T NLN+IIDVN+YP++ SN+RHRPIG+G+QGLAD F LL PF S
Sbjct: 464 DFNELHKVTKVLTRNLNRIIDVNYYPVKEAYNSNMRHRPIGLGVQGLADAFQLLRFPFSS 523
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LNK IFETIY+ A+++S+ELA + G YE+Y GSP SKG LQ D+WN+TP+ WDW
Sbjct: 524 EEARLLNKQIFETIYHAAVESSSELAQEFGVYESYHGSPASKGQLQYDLWNVTPTGLWDW 583
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+SL+E +++ G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYTRRVLSGEF +VN L
Sbjct: 584 TSLKEKVAQRGLRNSLLVAPMPTASTSQILGFNECFEPYTSNIYTRRVLSGEFQIVNPWL 643
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL + GLW+ +K +II GSV IS+IP+++K +YKTVWEI QK ++D+AADRG +
Sbjct: 644 LKDLCDRGLWNDTMKNRIIAHGGSVQNISDIPDDIKELYKTVWEISQKVIIDLAADRGAF 703
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLN+H+ P H +LTS+HFYA +G+KTGMYYLRTR + AI+FTVD L K
Sbjct: 704 IDQSQSLNVHLASPTHAQLTSMHFYAHRRGLKTGMYYLRTRPQSAAIQFTVDKQALEEAK 763
Query: 781 ANR 783
A +
Sbjct: 764 ATQ 766
>gi|332211477|ref|XP_003254845.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Nomascus leucogenys]
Length = 792
Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/811 (64%), Positives = 650/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK++ NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLRMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|336275156|ref|XP_003352331.1| heterokaryon incompatibility protein [Sordaria macrospora k-hell]
gi|380088434|emb|CCC13588.1| putative heterokaryon incompatibility protein [Sordaria macrospora
k-hell]
Length = 937
Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/776 (65%), Positives = 623/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGR+E V+FDKITAR+ +L YGL H DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S I ++YNY N ++GK + ++A D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSLVINELYNYVNPKTGKHSPMIAKDT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ D AI+YDRDF++ YFGFKTLERSYLLK+D ++ ERPQHM+MRV+VGI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGQIAERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMS FTHA+PTLFNAGTPQ QLSSCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSLKTFTHASPTLFNAGTPQAQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL+IH IRA+GSYI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+R+ +G W+L CP + GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRIEQNGTWTLMCPHECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EG+ + + A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGKGRKTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLAS+AL +V D +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALAAFV------------------DYENASY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++ NLNKIIDVNHYP+ SN+RHRPIG+G+QGLAD F+ L +PF+S
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDVNHYPVMEAHNSNMRHRPIGVGVQGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LN IFETIY+ AL AS +LA + G Y TY GSP+S+GILQ DMWN+TPS+ WDW
Sbjct: 523 PEARKLNIQIFETIYHAALTASCQLAKEQGTYSTYEGSPVSQGILQYDMWNVTPSNLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+ I K+GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 AALKADIKKHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL E+GLWS +K +II E GS+ I+ IP+++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LRDLVEMGLWSDNMKNRIIAEGGSIQNIASIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM +P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEAL 758
>gi|367005242|ref|XP_003687353.1| hypothetical protein TPHA_0J00970 [Tetrapisispora phaffii CBS 4417]
gi|357525657|emb|CCE64919.1| hypothetical protein TPHA_0J00970 [Tetrapisispora phaffii CBS 4417]
Length = 875
Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/785 (63%), Positives = 635/785 (80%), Gaps = 17/785 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGRKEPVRFDKITAR+ +L YGL +H DPV V Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVIKRDGRKEPVRFDKITARISRLCYGLDSDHVDPVKVTQRIISGVYEGVTTEELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+A+SNLHK T FS+ I+ +Y Y N + K A L++DDV
Sbjct: 61 AETAAYMTTVHPDYAILAARLAISNLHKQTTKCFSDVIQQLYEYINPENNKPAKLISDDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE++MK+ L+ AI++DRDF F+YFGFKTLERSYLLKM+++V ERPQHM+MRV++GIH
Sbjct: 121 YEVVMKHKDELNSAIVFDRDFQFNYFGFKTLERSYLLKMNNKVAERPQHMIMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +S L+TY+LMSQ +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDS++GI+DTLK+CA+
Sbjct: 181 DDIESVLETYNLMSQRYFTHASPTLFNAGTPNPQMSSCFLVAMKDDSLDGIFDTLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL HNIRA+GSYI GTNG+SNG++PML+VFN+TARYVDQGG KR GA AIY
Sbjct: 241 ISKTAGGIGLHAHNIRATGSYIAGTNGTSNGLIPMLRVFNNTARYVDQGGNKRPGAIAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIF+F+D+RKN GKEE RARDLF ALWVPDLFM+RV ++G W+LF PS+A GL+
Sbjct: 301 LEPWHDDIFDFVDIRKNHGKEEMRARDLFPALWVPDLFMKRVEENGDWTLFSPSEAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++Y EGR + I A+KLW+ IL +Q ETGTP++++KD+CNRKSNQ+NL
Sbjct: 361 DVYGAEFEALYNKYVAEGRGRRTIKAQKLWYSILEAQTETGTPFIVYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+S+P+ETAVCNLASIALP ++ S D + +
Sbjct: 421 GTIKSSNLCCEIVEYSAPDETAVCNLASIALPAFIDV--------------SEDGNTQTY 466
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L +V K++T NLN++ID N+YP+E + SN RHRPI +GIQGLADTF LL LPFES
Sbjct: 467 NFQKLHDVAKVLTRNLNRVIDRNYYPVEEAKNSNFRHRPIALGIQGLADTFQLLRLPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+A++LN IFET+Y+ AL++S ELA KDGPY +Y GSP+SKG+LQ DMW + P+D WDW
Sbjct: 527 QKAKELNIHIFETLYHAALESSCELAQKDGPYPSYQGSPVSKGVLQYDMWGVDPTDLWDW 586
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+ I K+G+RNSLL+APMPTASTSQILG NECFEP+TSN+Y RR LSGEF +VN +L
Sbjct: 587 APLKANIKKHGIRNSLLLAPMPTASTSQILGYNECFEPFTSNMYQRRTLSGEFQIVNPYL 646
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LGLW+ ++K +I NGS++ + +P+ELK IYKTVWEI QKT+++ AADR +
Sbjct: 647 LRDLVDLGLWNDSMKQHLITANGSIADLPNVPQELKEIYKTVWEISQKTIIEFAADRSAF 706
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN--- 777
IDQS SLNIH+ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V
Sbjct: 707 IDQSHSLNIHIRAPTFGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDAKVAEQAA 766
Query: 778 NEKAN 782
N KAN
Sbjct: 767 NAKAN 771
>gi|388454038|ref|NP_001252816.1| ribonucleoside-diphosphate reductase large subunit [Macaca mulatta]
gi|355566819|gb|EHH23198.1| Ribonucleoside-diphosphate reductase large subunit [Macaca mulatta]
gi|355752416|gb|EHH56536.1| Ribonucleoside-diphosphate reductase large subunit [Macaca
fascicularis]
gi|380815414|gb|AFE79581.1| ribonucleoside-diphosphate reductase large subunit [Macaca mulatta]
gi|383420603|gb|AFH33515.1| ribonucleoside-diphosphate reductase large subunit [Macaca mulatta]
Length = 792
Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/811 (64%), Positives = 650/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK++ NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 NLLKENIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 762 KISKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|254565653|ref|XP_002489937.1| One of two large regulatory subunits of ribonucleotide-diphosphate
reductase [Komagataella pastoris GS115]
gi|238029733|emb|CAY67656.1| One of two large regulatory subunits of ribonucleotide-diphosphate
reductase [Komagataella pastoris GS115]
gi|328350349|emb|CCA36749.1| ribonucleoside-diphosphate reductase subunit M1 [Komagataella
pastoris CBS 7435]
Length = 867
Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/787 (64%), Positives = 627/787 (79%), Gaps = 16/787 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDG KEPVRFDKITAR+ +L YGL +H D V + Q+V +GVY GVTT +LD LA
Sbjct: 1 MYVFKRDGHKEPVRFDKITARVSRLCYGLDPKHVDAVAITQRVISGVYHGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T +S+ K++Y Y N ++GK + LV++D
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQYSQVTKELYEYINPKNGKHSPLVSEDT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+ K+A L+ AI+YDRDF ++YFGFKTLERSYLL+++ V ERPQH++MRV++GIH
Sbjct: 121 YNIVQKHADELNSAIVYDRDFQYNYFGFKTLERSYLLRINGNVAERPQHLIMRVAIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD ++TY+ MSQ +FTHA+PTLFNAGTP PQ+SSCFL+ M+DDSIEGIYDTLK+CA+
Sbjct: 181 DDIARVIETYNFMSQKYFTHASPTLFNAGTPHPQMSSCFLVAMRDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIRA+GSYI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRATGSYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF F+D+RKN GKEE RARDLF ALW+PDLFM+RV +G W+LF PS+A GLA
Sbjct: 301 LEPWHADIFAFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPSEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EGR + I A+KLW+ IL +Q ETGTP+ML+KD+CN+K+NQ+NL
Sbjct: 361 DVYGDEFEELYERYEKEGRGRQTIKAQKLWYAILEAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+SSPEETAVCNLASIALP +V D + +
Sbjct: 421 GVIKSSNLCCEIVEYSSPEETAVCNLASIALPAFVE----------------TDDTHCWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FE+L E+TK++T NLN+IID N YP+ RRSN+R+RPI +G+QGLAD F+ L +PF+S
Sbjct: 465 NFEKLHEITKVVTRNLNRIIDRNFYPVPEARRSNMRNRPIAVGVQGLADAFMKLRIPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ AL+AS ELAV++G YET+ GSP S+GILQ D+W+ PS+ W+W
Sbjct: 525 PEAKQLNIQIFETIYHAALEASNELAVEEGAYETFQGSPASQGILQYDLWDKKPSELWEW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+ I G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN +L
Sbjct: 585 ESLKAKIVSTGLRNSLLVAPMPTASTSQILGYNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LGLW +K II +NGS+ + IPE+LK +YKTVWEI QKT++DMAADR Y
Sbjct: 645 LRDLVDLGLWDDNMKNHIISDNGSIQNLPNIPEQLKGLYKTVWEISQKTIIDMAADRSAY 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ P GKLTS+HFY W KG+KTGMYYLRT+AAA AI+FTVD +
Sbjct: 705 IDQSQSLNIHLMAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVDKVAVLQAS 764
Query: 781 ANRADND 787
+A+ D
Sbjct: 765 LTKANLD 771
>gi|255949828|ref|XP_002565681.1| Pc22g17720 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592698|emb|CAP99060.1| Pc22g17720 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 863
Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/784 (65%), Positives = 629/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GV T +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHIDAAAITQKVISGVYQGVGTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++ K A +++ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSMVISDLYHYVNPKNNKPAPMISKEH 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+MK+A L+ AI+YDRDF++++FGFKTLERSYLL+++ V ERPQH+LMRV+VGIH
Sbjct: 121 YEIVMKHAEELNSAIVYDRDFNYNFFGFKTLERSYLLRINGTVAERPQHLLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + A++TYHLMSQ +FTHA+PTLFNA TPQPQL+SCFL+ M DSIEGIYDTLK CA+
Sbjct: 181 EDIEKAIETYHLMSQKYFTHASPTLFNAATPQPQLASCFLVDMSADSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLFYALW PDLFM+RV +G W+LFCP++A GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY++YE+EGR + I A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGEEFDALYAKYEQEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLAS+ALP +V DS +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFV------------------DSARGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EV +++ NLNKIID+N+YP+ ++SN RHRPI +G+ GLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVVQVLVHNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ AL AS+++A K GPYETY GSP+S+GILQ DMW+ TP+D WDW
Sbjct: 523 PEARQLNIQIFETIYHGALTASSDIAKKLGPYETYPGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+SL+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 ASLKAKIAETGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II + GSV I IP ++KA+YKTVWEI Q+ ++ MAADRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRNILQMAADRGAY 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GKLTS+HF W G+KTGMYYLRT AA+ I+FTVD L E
Sbjct: 703 IDQSQSLNIHLKEPTMGKLTSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLLVED 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|5006420|gb|AAD37491.1| ribonucleotide reductase M1 subunit [Homo sapiens]
Length = 792
Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/811 (64%), Positives = 650/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIK+DGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKQDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK++ NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|296421726|ref|XP_002840415.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636631|emb|CAZ84606.1| unnamed protein product [Tuber melanosporum]
Length = 884
Score = 1102 bits (2851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/785 (64%), Positives = 629/785 (80%), Gaps = 22/785 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRD RKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVVKRDNRKERVQFDKITARVSRLCYGLDSEHVDAATITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS+ I D+Y+Y N ++G+ AS+++ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSQVISDLYHYVNPKNGRPASMISTET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++A+ LD AIIYD+DF+++YFGFKTLERSYLL+++ +V ERPQHMLMRV+VGIH
Sbjct: 121 YETVMRHASELDSAIIYDKDFNYNYFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D ++TY+L S +FTHA+PTLFNAGTP PQLSSCFL+ MK DSI+GIYDTLK CA+
Sbjct: 181 EDVDKVIETYNLTSSKYFTHASPTLFNAGTPSPQLSSCFLVTMKGDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IRA+GSYI GTNGSSNGIVPML+VFN TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNIHCIRATGSYIAGTNGSSNGIVPMLRVFNHTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+F+DLRKN GKEE RARDLFYALW+PDLFM+RV + +WSLFCP++A GLA
Sbjct: 301 MEPWHADIFDFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANAEWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEE-EGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQN 419
D WG EFE LY++YE + A+ I A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQQN
Sbjct: 361 DVWGEEFEALYNKYENTKDLARKTIKAQKLWYHILEAQTETGNPFMLYKDACNRKSNQQN 420
Query: 420 LGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRL 479
LGTI+SSNLCTEIVE+S+P+E AVCNLAS+ALP YV D +
Sbjct: 421 LGTIRSSNLCTEIVEYSAPDEVAVCNLASLALPTYV------------------DVQRGE 462
Query: 480 FDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFE 539
+DF +L EVTK++ +NLNKIIDVN YP+ R+SN RHRP+G+G+QGLAD F+ L +PFE
Sbjct: 463 YDFAKLHEVTKVVIKNLNKIIDVNFYPVPEARKSNTRHRPVGVGVQGLADAFLALRMPFE 522
Query: 540 SPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWD 599
SP+A+QLN IFETIY+ A++AS ELA GPY TY GSP SKG LQ D+WN+TP++ WD
Sbjct: 523 SPQAKQLNIQIFETIYHAAVEASTELAEIQGPYPTYEGSPASKGQLQYDLWNVTPTELWD 582
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L+E + K+G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN
Sbjct: 583 WDELKEKVKKHGLRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPW 642
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDL ++GLWS +K +II ENGS+ I IP+++KA+YKTVWEI QK ++++ G
Sbjct: 643 LLKDLVDMGLWSDNMKNRIIAENGSIQNIPNIPDDIKALYKTVWEISQKKVIEVC---GA 699
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
+IDQSQSLNIH++ P GKLTS+HFY W G+KTGMYYLRT+AAA AI+FTVD L
Sbjct: 700 FIDQSQSLNIHIQNPTMGKLTSMHFYGWRLGLKTGMYYLRTQAAAAAIQFTVDQEALKVA 759
Query: 780 KANRA 784
N A
Sbjct: 760 DTNVA 764
>gi|212528622|ref|XP_002144468.1| ribonucleotide reductase large subunit Rnr1, putative [Talaromyces
marneffei ATCC 18224]
gi|210073866|gb|EEA27953.1| ribonucleotide reductase large subunit Rnr1, putative [Talaromyces
marneffei ATCC 18224]
Length = 872
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/784 (64%), Positives = 629/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKE V+FDKITAR+ +L YGL +H D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I+D+Y+Y N ++ K A +++ ++
Sbjct: 61 AETAAYMTVTHPDYAVLAARIAVSNLHKQTKKQFSAVIEDLYHYVNPKNNKAAPMISGEM 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +MK+A L+ AI+YDRDF++ YFGFKTLERSYLL+++ +V ERPQHM+MRV+VGIH
Sbjct: 121 YETVMKHAEELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
++ + A++TY+LMSQ +FTHA+PTLFNAGTP+PQL+SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 ENIEKAIETYNLMSQKYFTHASPTLFNAGTPRPQLASCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA+GSYI GTNG+SNG+VPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGLNVHRIRATGSYIGGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+FEFLDLRKN GKEE RARDLFYALW PDLFM RV + W+LFCP++ASGLA
Sbjct: 301 LEPWHSDVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMRRVEANQDWTLFCPNEASGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY +YE EGR + + A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGEEFDALYEKYEREGRGRRTVKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ +P+E AVCNLAS+ALP +V D+ +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPTFV------------------DTARGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVT+++ NLNKIID+N+YP+ ++SN RHRPI +G+ GLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVTQVLVRNLNKIIDINYYPVPEAKKSNFRHRPIAVGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ AL AS ELA + G YETY GSP+S+GILQ DMW TP+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHGALTASIELAKEHGTYETYEGSPVSQGILQYDMWERTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+ IS++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DSLKAQISQHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II + GSV I IP ++KA+YKTVWEI Q++++ MAADRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRSILQMAADRGAY 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L E
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLKVED 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|73988079|ref|XP_534027.2| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Canis lupus familiaris]
Length = 792
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/811 (64%), Positives = 650/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +G+ + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIH+
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHE 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK+I NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+S+GILQ DMWN+TP++ WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSRGILQYDMWNVTPTELWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QK ++ MAA+RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKIVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N+EEC+ CGS
Sbjct: 762 KATKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|430813498|emb|CCJ29155.1| unnamed protein product [Pneumocystis jirovecii]
Length = 848
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/776 (65%), Positives = 624/776 (80%), Gaps = 20/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V FDKITAR+ +L YGL EH D + KV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVAFDKITARVSRLCYGLDMEHVDAASITMKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N R+ K + +++
Sbjct: 61 AETAAYMTTKHPDYAILAARIAVSNLHKQTKKVFSHVISDLYHYVNPRNNKPSPMISLKT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++A LD AIIYDRDF ++YFGFKTLERSYLL+++ +V ERPQHM+MRV+VGIH
Sbjct: 121 YETVMRHANELDSAIIYDRDFTYNYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + A++TY+LMS + THA+PTLFNAGTP PQLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 DDVEKAIETYNLMSAKYMTHASPTLFNAGTPNPQLSSCFLVTMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNG+SNGI+PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHCIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIFEFLDLRKN GKEE RARDLFY LW+PDLFM+RV + WSLFCP++A GL
Sbjct: 301 IEPWHADIFEFLDLRKNHGKEEIRARDLFYGLWIPDLFMKRVEANQDWSLFCPNEAPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+E RA ++ A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGEEFEVLYEKYEQEKRATRIVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI+E+SSP+E AVCNLASIALP ++ +KG+ +
Sbjct: 421 GTIKCSNLCTEIIEYSSPDEVAVCNLASIALPTFI-DKGI-------------------Y 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +VTK++ NLNKIIDVN+YP+E RRSN RHRPIGIG+QGLAD F+ L +PF+S
Sbjct: 461 DFQKLHDVTKVVARNLNKIIDVNYYPVEEARRSNKRHRPIGIGVQGLADAFLSLRMPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
P A++LN IFETIY+ AL+AS ELA ++GPYETY GSP S+GILQ DMWN+ P+D WDW
Sbjct: 521 PHAKELNIKIFETIYHAALEASCELAQEEGPYETYEGSPASQGILQYDMWNVVPTDLWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+ I++ G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 581 DSLKVNIARYGLRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLW+ +K +II NGS+ I IP E+KA+YKTVWE+ QKT++D AADRG +
Sbjct: 641 LKDLVDLGLWNDIMKNRIIANNGSIQNIPSIPAEIKALYKTVWELSQKTIIDYAADRGAF 700
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIH+ P GK+T +HF+ W KG+KTGMYYLRT+AA+ I+FTVD L
Sbjct: 701 IDQSQSLNIHIRDPSFGKITGMHFWGWRKGLKTGMYYLRTQAASAPIQFTVDRKAL 756
>gi|440632150|gb|ELR02069.1| ribonucleoside-diphosphate reductase subunit M1 [Geomyces
destructans 20631-21]
Length = 827
Score = 1102 bits (2849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/776 (65%), Positives = 620/776 (79%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KR+G KE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRNGNKERVQFDKITARVSRLCYGLDAEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++ K + ++A
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIHDLYHYVNPKNSKPSPMIAKKT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+MK+A L+ A++YDRDF++ YFGFKTLERSYLL++D +V ERPQHM+MRV+VGIH
Sbjct: 121 YDIVMKHAEELNSAVLYDRDFNYQYFGFKTLERSYLLRLDGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + +TY+LMS +FTHA+PTLFNAGTPQ QLSSCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 EDIEKTTETYNLMSSKYFTHASPTLFNAGTPQAQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IRA+G+YI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNIHRIRATGAYIAGTNGNSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHAD+FEFLDLRKN GKEE RARDLFYALW+PDLFM+RV +G W+L CP++ GLA
Sbjct: 301 VEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEKNGAWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY YE+EG+ + I A+KLW+ IL SQ ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEGYEKEGKGRKTIKAQKLWYSILESQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+S+P+E AVCNLAS+ALP YV D N +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPTYV------------------DMANGTY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++ +NLNKIIDVN+YP+E RRSN RHRP+ +G+QGLAD F+ L LPF+S
Sbjct: 463 DFQKLHEVTQVVVKNLNKIIDVNYYPVEEARRSNFRHRPVAVGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+ LN IFETIY+ AL AS ELA G YETY GSP+SKG LQ DMW +TP+D WDW
Sbjct: 523 PEAKFLNSQIFETIYHGALTASVELAQIHGTYETYEGSPVSKGELQYDMWGVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+ I ++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DSLKVRIKQHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II + GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM+ P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEAL 758
>gi|291384376|ref|XP_002708776.1| PREDICTED: ribonucleoside-diphosphate reductase M1 chain
[Oryctolagus cuniculus]
Length = 792
Score = 1102 bits (2849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/811 (64%), Positives = 650/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+Y+Y N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYSYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTE+VE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEVVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK+I NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +LA + GPYETY G P+SKGILQ DMWN+TP+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGCPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 762 KASKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|386819560|ref|ZP_10106776.1| ribonucleoside-diphosphate reductase, alpha subunit [Joostella
marina DSM 19592]
gi|386424666|gb|EIJ38496.1| ribonucleoside-diphosphate reductase, alpha subunit [Joostella
marina DSM 19592]
Length = 810
Score = 1101 bits (2848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/832 (63%), Positives = 649/832 (78%), Gaps = 44/832 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGR+EP+ FDKITAR++KL YGL+ E DPV VA +V G+Y GVTT++LD LA
Sbjct: 1 MYVIKRDGRREPIMFDKITARVRKLCYGLN-ELVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT HPDYA LA R++VSNLHK TK SFSET+ D+YNY N R+GK A L++D+V
Sbjct: 60 AEIAATMTTTHPDYARLAARISVSNLHKNTKKSFSETMADLYNYVNPRTGKAAPLLSDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+I KNA LD IIY+RDF +DYFGFKTLERSYLLK++ ++ ERPQHMLMRVSVGIH
Sbjct: 120 YEVIQKNADKLDSLIIYNRDFGYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DS L+TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFL+ K+DSI+GIYDTLK+ A
Sbjct: 180 DDLDSVLETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLITTKEDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIAGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGSFAVY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FLDL+KN GKEE RARDLFYA+W+PDLFM+RV ++G+W+L CP++ GL
Sbjct: 300 IEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWMPDLFMKRVEENGEWTLMCPNECPGLC 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D EF+ LY +YE EG+ + I AR+LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 DVHSDEFDALYLKYEAEGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLASIALP +V K F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFV--------------------KGNEF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +VTK +T NLN++ID N+YP+E R SN RHRPIG+G+QGLADTFI L +PF S
Sbjct: 460 DHKELYKVTKRVTRNLNRVIDRNYYPVEEARNSNFRHRPIGLGVQGLADTFIKLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA++LN+DIFET+Y+ A+ AS E+A ++GPYETY GSP+S+G Q ++W I S
Sbjct: 520 DEAKKLNQDIFETLYFAAVTASMEMAKEEGPYETYKGSPISQGDFQHNLWGIKDDELSGN 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW LR+ + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWDKLRKEVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL +LGLW+ LK +++ NGS+ I IP++++ +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVDLGLWTEELKQELMRANGSIQHIETIPQDIRDLYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQSLN+ ME ++ KLTS+HFYAW G+KTGMYYLRT++A DAIKFT+D +
Sbjct: 700 GYFIDQSQSLNLFMEGANYAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLDNTK-K 758
Query: 778 NEKANRADNDVEANLAQ-----VVCSLKNQE--------------ECMACGS 810
EK +V+A++A V L QE +C+ CGS
Sbjct: 759 TEKVPAEAAEVKASVAGKAAPVAVEPLSPQELKEMLAKSRDAEDDDCLMCGS 810
>gi|116200095|ref|XP_001225859.1| ribonucleoside-diphosphate reductase large chain [Chaetomium
globosum CBS 148.51]
gi|88179482|gb|EAQ86950.1| ribonucleoside-diphosphate reductase large chain [Chaetomium
globosum CBS 148.51]
Length = 912
Score = 1101 bits (2848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/782 (64%), Positives = 626/782 (80%), Gaps = 18/782 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGR+E V+FDKITAR+ +L YGL +H DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVRKRDGRQERVQFDKITARVSRLCYGLDVDHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S + D+Y+Y N ++ + + ++A +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNERASPMIAKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ LD AI+YDRDF++ YFGFKTLERSYLLK++ ++VERPQHM+MRV+VGI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ + ++TY+LMS +FTHA+PTLFNAGTPQ QLSSCFL+ MKDDSIEGIYD+LK CA+
Sbjct: 181 DNVERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDSLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL+IH IRA+GSYI GTNG+SNGI+PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G+W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+ GR + I A+KLW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYEKAGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLAS+ALP++V D ++
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPQFV------------------DYNQGVY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EV +++ NLNKIIDVNHYP++ SN+RHRPIG+G+QGLAD F+ L +PFES
Sbjct: 463 DFQKLHEVAQVVVRNLNKIIDVNHYPVQEAYNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNK IFETIY+ AL AS +LA + G Y TY GSP+S+GILQ DMWN+TP+ WDW
Sbjct: 523 PEARELNKQIFETIYHAALTASCDLAKEQGTYSTYEGSPVSQGILQYDMWNVTPTGLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+ I ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DALKAKIKEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II + GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPTDIKALYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM +P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L +
Sbjct: 703 IDQSQSLNIHMREPSMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEALRVQD 762
Query: 781 AN 782
N
Sbjct: 763 TN 764
>gi|345563310|gb|EGX46313.1| hypothetical protein AOL_s00110g137 [Arthrobotrys oligospora ATCC
24927]
Length = 917
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/785 (65%), Positives = 632/785 (80%), Gaps = 19/785 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKE V+FDKITAR+ +L YGL EH D + QKV AGVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKERVQFDKITARVSRLCYGLDAEHVDAATITQKVIAGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS+ + D+Y+Y N R+ + + +++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSQVVSDLYHYVNPRNKRPSPMISKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++A L+ AI+YD+DF+++YFGFKTLERSYLL++D +V ERPQHM+MRVSVGIH
Sbjct: 121 YETVMRHADELNSAIVYDKDFNYNYFGFKTLERSYLLRLDGKVAERPQHMIMRVSVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
++ + A++TY+LMS +FTHA+PTLFNAGTPQ QLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 ENIEKAIETYNLMSSKYFTHASPTLFNAGTPQAQLSSCFLVAMKDDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL +HNIRA+GSYI GTNG+SNG++PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLHVHNIRATGSYIAGTNGTSNGLIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F+FLDLRKN GKEE RARDLFYALW+PDLFM+RV + WSLFCP++A+GLA
Sbjct: 301 LEPWHADVFDFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANLDWSLFCPNEATGLA 360
Query: 361 DSWGIEFEHLYSQYEE-EGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQN 419
D +G EFE LY +YE+ E A+ I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+N
Sbjct: 361 DCYGEEFEALYEKYEKTENLARKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKN 420
Query: 420 LGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRL 479
LG IKSSNLCTEIVE+SSP+E AVCNLASIALP +V D
Sbjct: 421 LGIIKSSNLCTEIVEYSSPDEVAVCNLASIALPTFV------------------DVVRNE 462
Query: 480 FDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFE 539
+DF++L EVTK+IT NLNKIIDVN+YP+E +RSN RHRPI +G+QGLAD F+ L +PFE
Sbjct: 463 YDFQKLHEVTKVITRNLNKIIDVNYYPVEEAKRSNFRHRPIAVGVQGLADAFLALRMPFE 522
Query: 540 SPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWD 599
SPEA+ LNK IFETIY+ A +ASAELA + GPYE+Y GSP S+G LQ DMWN+TP+D WD
Sbjct: 523 SPEARHLNKQIFETIYHGAAEASAELAAEQGPYESYEGSPASQGQLQYDMWNVTPTDLWD 582
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L+ I+K+G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN
Sbjct: 583 WDELKAKIAKHGMRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPW 642
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL+DL ++GLWS +K +II + GS+ + IP ++K++YKTVWEI QK ++D+AADR
Sbjct: 643 LLRDLVDMGLWSDNMKNRIIADGGSIQNVPNIPADIKSLYKTVWEISQKVVIDLAADRSA 702
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
+IDQSQSLNIH++ P GKLTS+HFY W KG+KTGMYYLRT AA+ AI+FTVD L E
Sbjct: 703 FIDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTMAASAAIQFTVDQEALKIE 762
Query: 780 KANRA 784
A
Sbjct: 763 DTTVA 767
>gi|340522103|gb|EGR52336.1| large subunit of ribonucleoside-diphosphate reductase [Trichoderma
reesei QM6a]
Length = 931
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/780 (65%), Positives = 622/780 (79%), Gaps = 25/780 (3%)
Query: 4 IKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDEL---- 59
++ DGR+E V+FDKITAR+ +L YGL EH DPV + QKV +GVY GVTT QLD+L
Sbjct: 26 LRLDGRQERVQFDKITARVSRLCYGLDTEHVDPVAITQKVISGVYGGVTTVQLDDLVSLH 85
Query: 60 ---AAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLV 116
AAETAA MTV HPDYA+LA R+AVSNLHK TK +S + D+Y+Y N ++ + + ++
Sbjct: 86 ELVAAETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNNRASPMI 145
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSV 176
+ D YE +M++ LD AI+YDRDF++ YFGFKTLERSYLLK+D ++VERPQHM+MRV+V
Sbjct: 146 SKDTYECVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIVERPQHMIMRVAV 205
Query: 177 GIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLK 236
GI DD + L+TYHLMS +FTHA+PTLFNAGTPQ QLSSCFL+ MKDDSIEGIYDTLK
Sbjct: 206 GIWGDDIERVLETYHLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLK 265
Query: 237 KCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGA 296
CA+ISK AGGIGL++H IRA+GSYI GTNG+SNGI+PML+VFN+TARYVDQGG KR GA
Sbjct: 266 TCAMISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGA 325
Query: 297 FAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDA 356
FAIYLEPWHAD+F+FLDLRKN GKEE RARDLF ALW+PDLFM+RV + W+L CP++
Sbjct: 326 FAIYLEPWHADVFDFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNLDWTLMCPNEC 385
Query: 357 SGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSN 416
GLAD +G EFE LY +YE EGR + I A+KLW+ IL +Q ETG P+ML+KD CNRKSN
Sbjct: 386 PGLADCYGEEFEALYEKYEREGRGRKTIRAQKLWYSILEAQTETGNPFMLYKDHCNRKSN 445
Query: 417 QQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSK 476
Q+NLGTI+SSNLCTEI+E+ +P+E AVCNLAS+ALP +V D
Sbjct: 446 QKNLGTIRSSNLCTEIIEYCAPDEVAVCNLASLALPAFV------------------DYN 487
Query: 477 NRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGL 536
+DF++L EVTK++ NLN+IIDVNHYP++ R SN+RHRPIG+G+QGLAD F+ L L
Sbjct: 488 EGCYDFKKLHEVTKVVVRNLNRIIDVNHYPVQEARNSNMRHRPIGVGVQGLADAFLALRL 547
Query: 537 PFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD 596
PFESPEA++LNK IFETIY+ AL+AS E+A +GPYE++ GSP S+GILQ DMW++ PSD
Sbjct: 548 PFESPEARELNKQIFETIYHAALEASMEIAKVEGPYESFKGSPASEGILQYDMWDVKPSD 607
Query: 597 RWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVV 656
W+W SL+E I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VV
Sbjct: 608 LWEWDSLKEQIKEHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVV 667
Query: 657 NKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAAD 716
N LLKDL + GLWS A+K +II ENGS+ I IPE++KA+YKTVWEI Q+ +V MAAD
Sbjct: 668 NPWLLKDLVDTGLWSDAMKNRIIAENGSIQNIPNIPEDIKALYKTVWEISQRQIVQMAAD 727
Query: 717 RGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
RG +IDQSQSLNIHM+ P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 728 RGAFIDQSQSLNIHMKDPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAAPIQFTVDQQAL 787
>gi|62897131|dbj|BAD96506.1| ribonucleoside-diphosphate reductase M1 chain variant [Homo
sapiens]
Length = 792
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/811 (64%), Positives = 648/811 (79%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK + +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKTNGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK++ NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IF TIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 AEAQLLNKQIFGTIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHVAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|156836703|ref|XP_001642400.1| hypothetical protein Kpol_259p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156112918|gb|EDO14542.1| hypothetical protein Kpol_259p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 874
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/785 (63%), Positives = 634/785 (80%), Gaps = 14/785 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPVRFDKITAR+ +L YGL H DPV V Q++ GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARISRLCYGLDPNHIDPVKVTQRIITGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA LA R+A+SNLHK T FS+ + D+Y+Y N + K A LV+++V
Sbjct: 61 AETAAYMTTVHPDYATLAARLAISNLHKQTTKLFSQVVDDLYHYINPENSKHAPLVSEEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M++ L+ AI+YDRDF F+YFGFKTLERSYLL+M V ERPQH++MRV++GIH
Sbjct: 121 YNIVMEHKDELNSAIVYDRDFQFNYFGFKTLERSYLLRMKGEVAERPQHLIMRVAIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A++TY+LMSQ +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDS+EGI+DTLK+CA+
Sbjct: 181 EDIEAAIETYNLMSQRYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSLEGIFDTLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIRA+GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GA A+Y
Sbjct: 241 ISKTAGGIGLHIHNIRATGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAMALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV ++G W+LF PS+A GL
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGDWTLFSPSEAPGLE 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ +G EFE LY++Y EGR + I A+KLW+ IL +Q ETGTP+ML+KD+CN KSN +NL
Sbjct: 361 EVYGEEFEALYNRYVAEGRGRKTIKAQKLWYSILEAQTETGTPFMLYKDACNTKSNHKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+S+P+ETAVCNLASIALP ++ S D +++ +
Sbjct: 421 GTIKSSNLCCEIVEYSAPDETAVCNLASIALPAFIE--------------VSEDGRSQTY 466
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E++K++T NLNK+ID N+YP+E R SN RHRPI +G+QGLADTF+LL +PFES
Sbjct: 467 NFKKLHEISKVVTRNLNKVIDRNYYPVEEARNSNFRHRPIALGVQGLADTFMLLRIPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFET+Y+ AL+AS ELA K+G YE+Y SP+S+G+LQ DMWN PSD WDW
Sbjct: 527 KEAKELNTHIFETMYHAALEASCELAEKEGYYESYPNSPVSQGVLQYDMWNRKPSDLWDW 586
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+E I K+GVRNSLL+APMPTASTSQILG NECFEP+TSN+Y RRVLSGEF +VN +L
Sbjct: 587 ATLKEQIKKHGVRNSLLLAPMPTASTSQILGYNECFEPFTSNMYQRRVLSGEFQIVNPYL 646
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W ++K +I +NGS+ + IP+ELK +YKTVWEI QKT++DMA DR +
Sbjct: 647 LRDLVDLGIWDESMKQHLITDNGSIQNLPNIPQELKDLYKTVWEISQKTIIDMATDRSAF 706
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS S+NIH+ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D SV +
Sbjct: 707 IDQSHSMNIHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKSVADQAA 766
Query: 781 ANRAD 785
+ AD
Sbjct: 767 KSTAD 771
>gi|299743194|ref|XP_001835601.2| hypothetical protein CC1G_03383 [Coprinopsis cinerea okayama7#130]
gi|298405544|gb|EAU86172.2| hypothetical protein CC1G_03383 [Coprinopsis cinerea okayama7#130]
Length = 895
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/784 (65%), Positives = 626/784 (79%), Gaps = 25/784 (3%)
Query: 2 YVIKRD-----GRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQL 56
YV KR RKE V+FDKITAR+ KL YGL DP+ VAQKV GVY+GVTT +L
Sbjct: 22 YVFKRGPDASYSRKERVQFDKITARISKLCYGLDLNFVDPIEVAQKVVVGVYQGVTTVEL 81
Query: 57 DELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLV 116
D LAAETAA +T HPDYA+LA R+AVSNLHK TK SFS+ +KD+Y Y N ++GK A ++
Sbjct: 82 DNLAAETAAYLTTKHPDYAVLAARIAVSNLHKETKKSFSQVMKDLYEYVNPKNGKPAGMI 141
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSV 176
+ + +E+I NA LD AIIY+RDF+++YFGFKTLERSYLL+++ RV ERPQHM+MRV+V
Sbjct: 142 SKETWEVIRDNADTLDSAIIYNRDFNYNYFGFKTLERSYLLRLNGRVAERPQHMIMRVAV 201
Query: 177 GIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLK 236
GIH D D L+TY+LMS+ +FTHA+PTLFNAGTP PQLSSCFL+CMKDDSIEGIYDTLK
Sbjct: 202 GIHGRDIDRVLETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIEGIYDTLK 261
Query: 237 KCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGA 296
CA+ISK+AGGIGL+IH IRA+GSYI GTNG SNGIVPML+ ++ TARYVDQGG KR GA
Sbjct: 262 NCAMISKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGA 321
Query: 297 FAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDA 356
FAIY+EPWHAD+FEFLDLRKN GKEE RARDLFYALW+PDLFM+RV DG+WSLFCP++A
Sbjct: 322 FAIYIEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEADGEWSLFCPNEA 381
Query: 357 SGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSN 416
GL D EFE LY +YE+EGRA+ I A+KLW+ IL +QIETG P+M++KD N KSN
Sbjct: 382 PGLHDVHSAEFEELYERYEKEGRARKTIRAQKLWYAILEAQIETGGPFMVYKDHANAKSN 441
Query: 417 QQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSK 476
Q+NLGTIKSSNLCTEI+E+SSP+ETAVCNLAS+ALP ++ K
Sbjct: 442 QKNLGTIKSSNLCTEIIEYSSPDETAVCNLASLALPTFI--------------------K 481
Query: 477 NRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGL 536
+ ++DF++L EVTK++T NLN+IIDVN+YPI RRSN+RHRPIGIG+QGLAD F+ L +
Sbjct: 482 DGVYDFKKLHEVTKVVTYNLNRIIDVNYYPIPEARRSNMRHRPIGIGVQGLADAFMALRM 541
Query: 537 PFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD 596
PF+S A++LN IFETIY+ AL+AS+E+A +DGPYET+ GSP S+G LQ D+W + PSD
Sbjct: 542 PFDSQAAKELNLQIFETIYHAALEASSEIAARDGPYETWEGSPASQGQLQYDLWGVKPSD 601
Query: 597 RWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVV 656
WDW+SL+ I+K G+RNSLL+APMPTASTSQILG NECFEPYTSNIYTRRVL+GEF VV
Sbjct: 602 LWDWASLKAQIAKTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVV 661
Query: 657 NKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAAD 716
LL++L +LGLW +K II NGSV I IP ++KAIYKTVWEI QK ++D+AAD
Sbjct: 662 CPWLLRELVDLGLWDDNMKNLIIAHNGSVQNIPNIPADVKAIYKTVWEISQKKVIDLAAD 721
Query: 717 RGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
RG +I QSQSLN+H+ P G+LTS+HFY W KG+KTGMYYLRTR AA AI+FTVD S+L
Sbjct: 722 RGAFICQSQSLNVHLSAPTMGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSLL 781
Query: 777 NNEK 780
K
Sbjct: 782 KAAK 785
>gi|149634836|ref|XP_001505371.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Ornithorhynchus anatinus]
Length = 792
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/811 (64%), Positives = 649/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T +PDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +VA
Sbjct: 61 AETAATLTTKYPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYVNPHNGKHSPMVAKTT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRV+VGIH+
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVAVGIHE 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNRDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSRDEVAVCNLASLALNMFV-------------------TLEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPIPEASTSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LN+ IFETIYY AL AS +LA GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 PEAQLLNQQIFETIYYGALDASCDLAKDHGPYETYQGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+E I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KALKEKIAKYGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIPE+LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPEDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L ++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKEKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N+EEC+ CGS
Sbjct: 762 KATKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|429853065|gb|ELA28164.1| ribonucleoside-diphosphate reductase large chain [Colletotrichum
gloeosporioides Nara gc5]
Length = 898
Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/782 (64%), Positives = 625/782 (79%), Gaps = 18/782 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V+FDKITAR+ +L YGL +H DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S + D+Y+Y N ++G+ + ++A +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNGRLSPMIAKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ +M++ LD AI+YDRDF++ YFGFKTLERSYLLK+D ++ ERPQHM+MRV+VGI
Sbjct: 121 YDCVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIAERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMS FTHA+PTLFNAGTPQ QLSSCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSSKCFTHASPTLFNAGTPQAQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL++H IRA+GSYI GTNG+SNG+ PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGVTPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EG+ + + A+KLW+ IL +Q ETG P+ML+KD NRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGKGRKTMKAQKLWYAILEAQTETGNPFMLYKDHANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLAS+ALP +V + + ++
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPSFV------------------NYSDGIY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +VT+++ NLN+IIDVNHYP+ R SN+RHRPIG+G+QGLAD F+ L LPFES
Sbjct: 463 DFQKLHDVTQVVVRNLNRIIDVNHYPVPEARNSNMRHRPIGLGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNK IFETIY+ AL S +LA ++G Y +Y GSP+S+G+LQ DMW + PSD WDW
Sbjct: 523 PEARELNKKIFETIYHAALTMSVQLAKEEGTYSSYEGSPVSQGVLQYDMWGVKPSDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+E I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DSLKEQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS A+K +II ENGSV I IP E+KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSVQNIPNIPAEVKALYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+ P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALKIAD 762
Query: 781 AN 782
+N
Sbjct: 763 SN 764
>gi|406863487|gb|EKD16534.1| ribonucleotide reductase large subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 902
Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/776 (65%), Positives = 623/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDAEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N R+ + +++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSTVISDLYHYVNPRNKSASPMISQAT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +MK+ A L+ AI+YDRDF++ YFGFKTLERSYLL++D ++ ERPQHM+MRV+VGIH
Sbjct: 121 YECVMKHEAELNSAIVYDRDFNYQYFGFKTLERSYLLRLDGKIAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +SA++TY+LMS +FTHA+PTLF AGTPQ QLSSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 NDIESAIETYNLMSSKYFTHASPTLFAAGTPQAQLSSCFLIDMKEDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+G+YI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKNAGGIGLNVHRIRATGAYIAGTNGNSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLFYALW+PDLFM+RV +G+W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY QYE+EG+ + I A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGEEFEALYEQYEKEGKGRKTIKAQKLWYSILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+ +P+E AVCNLAS+ALP Y V ++ GS +
Sbjct: 421 GTIRSSNLCTEIVEYCAPDEVAVCNLASLALPTY-----------VDQVSGS-------Y 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L EV +++ +NLNKIID+N+YP+ R+SN RHRPI +G+QGLAD F+ L LPFES
Sbjct: 463 NFQKLHEVCQVVVKNLNKIIDINYYPVPEARKSNFRHRPIAVGVQGLADVFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ AL S ELA G YETY GSP SKG LQ DMWN+TP+D WDW
Sbjct: 523 PEAKQLNLQIFETIYHAALTGSVELAKLHGTYETYEGSPASKGELQYDMWNVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I ++G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DSLKQQIKQHGLRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II + GSV I IP ++KA+YKTVWEI Q+T+V MAADRG Y
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAY 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQS+NIHM+ P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSMNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEAL 758
>gi|197100140|ref|NP_001126012.1| ribonucleoside-diphosphate reductase large subunit [Pongo abelii]
gi|75041664|sp|Q5R919.1|RIR1_PONAB RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase
subunit M1; AltName: Full=Ribonucleotide reductase large
subunit
gi|55730032|emb|CAH91741.1| hypothetical protein [Pongo abelii]
Length = 792
Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/811 (64%), Positives = 649/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK K FS+ ++D+YNY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKEAKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK S+LCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSSLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK++ NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|171690020|ref|XP_001909942.1| hypothetical protein [Podospora anserina S mat+]
gi|170944965|emb|CAP71076.1| unnamed protein product [Podospora anserina S mat+]
Length = 901
Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/770 (65%), Positives = 615/770 (79%), Gaps = 18/770 (2%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DGR+E V+FDKITAR+ +L YGL +H DPV + QKV +GVY GVTT QLD+LAAETAA
Sbjct: 1 DGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTAQLDDLAAETAAY 60
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
MTV HPDYA+LA R+AVSNLHK TK +S + D+Y+Y N ++G+ + ++A + YE +M+
Sbjct: 61 MTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNGRPSPMIAKETYECVMR 120
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSA 186
+ LD AI+YDRDF++ YFGFKTLERSYLLK++ ++VERPQHM+MRV+VGI DD +
Sbjct: 121 HKDDLDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWGDDIERV 180
Query: 187 LKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAG 246
++TY MS +FTHA+PTLFNAGTPQ QLSSCFL+ MKDDSI+GIYDTLK CA+ISK AG
Sbjct: 181 IETYTYMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIDGIYDTLKTCAMISKMAG 240
Query: 247 GIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHA 306
GIGL+IH IRA+GSYI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFAIYLEPWHA
Sbjct: 241 GIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 300
Query: 307 DIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIE 366
D+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G+W+L CP++ GLAD +G E
Sbjct: 301 DVFEFLDLRKNHGKEEIRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLADCYGEE 360
Query: 367 FEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSS 426
FE LY +YE+EGR + I A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQQNLG I+SS
Sbjct: 361 FEALYEKYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQQNLGVIRSS 420
Query: 427 NLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLA 486
NLCTEIVE+S+P+E AVCNLAS+ALP++V D FDF++L
Sbjct: 421 NLCTEIVEYSAPDEVAVCNLASLALPQFV------------------DYNEAKFDFKKLH 462
Query: 487 EVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQL 546
EVT+I+ NLNKIIDVNHYP++ SN+RHRPIG+G+QGLAD F+ L +PFES EA++L
Sbjct: 463 EVTQIVVRNLNKIIDVNHYPVKEAYNSNMRHRPIGLGVQGLADAFLALRMPFESAEAREL 522
Query: 547 NKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREM 606
NK IFETIY+ AL S +LA + G Y TY GSP+SKGILQ DMWN+ PSD WDW L+
Sbjct: 523 NKQIFETIYHAALTMSCQLAKEQGTYSTYEGSPVSKGILQYDMWNVKPSDLWDWDELKAE 582
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTE 666
I KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN LLKDL +
Sbjct: 583 IKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWLLKDLVD 642
Query: 667 LGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQS 726
+GLWS +K +II E GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +IDQSQS
Sbjct: 643 MGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAFIDQSQS 702
Query: 727 LNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
LNIHM P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 LNIHMRDPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEAL 752
>gi|444731474|gb|ELW71827.1| Ribonucleoside-diphosphate reductase large subunit [Tupaia
chinensis]
Length = 792
Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/811 (64%), Positives = 648/811 (79%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTMVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK+ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKISGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY +YE++GR + V+ A++LW+ I+ SQ ETGTPYML+K SCNR +NQQNL
Sbjct: 361 EVWGEEFEKLYEKYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKASCNRTNNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPIPEAYLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KLLKDKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 762 KTSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|402076101|gb|EJT71524.1| ribonucleoside-diphosphate reductase large subunit [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 920
Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/776 (65%), Positives = 621/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V+FDKITAR+ +L YGL H DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGREERVQFDKITARVSRLCYGLDLNHVDPVKITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+++Y N ++G+ + ++A +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVISDLFHYVNPKNGRLSPMIAQET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ +M++ A D AI+YDRDF++ YFGFKTLERSYLLK+D ++VERPQHM+MRV+VGI
Sbjct: 121 YDCVMRHKAEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ + +TY+LMS +FTHA+PTLFNAGTPQ QLSSCFL+ MKDDSI+GIYDTLK CA+
Sbjct: 181 DNLERVFETYNLMSSKYFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL+IH IRA+GSYI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEIRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE G+ + + A+KLW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYERAGKGRKTLKAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLAS+ALP+++ D ++
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPQFI------------------DYNEGVY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +VT+++ NLNKIIDVN+YP++ R SN+RHRPIG+G+QGLAD F+ L LPFES
Sbjct: 463 DFQKLHKVTQVVVRNLNKIIDVNYYPVQEARNSNMRHRPIGLGVQGLADAFLALRLPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNK IFETIY+ L AS ELA + G Y TY GSP+S+GILQ DMWN+ PS+ WDW
Sbjct: 523 PEARELNKQIFETIYHAGLTASCELAREQGTYSTYEGSPVSQGILQYDMWNVKPSELWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 EGLKADIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ELGLWS +K +II E GS+ I+ IPE+ K +YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVELGLWSDDMKNRIIAEGGSIQNIASIPEDTKRLYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM +P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAQPIQFTVDQEAL 758
>gi|425781620|gb|EKV19574.1| Ribonucleoside-diphosphate reductase [Penicillium digitatum PHI26]
gi|425782887|gb|EKV20768.1| Ribonucleoside-diphosphate reductase [Penicillium digitatum Pd1]
Length = 861
Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/784 (64%), Positives = 626/784 (79%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GV T +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVGTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++ K A +++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSMVISDLYHYVNPKNNKPAPMISKQH 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+MK+A L+ AI+YDRDF+++YFGFKTLERSYLL++ V ERPQH+LMRV+VGIH
Sbjct: 121 YEIVMKHAEELNSAIVYDRDFNYNYFGFKTLERSYLLRISGNVAERPQHLLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + A++TYHLMSQ +FTHA+PTLFNA TPQPQL+SCFL+ + DSIEGIYDTLK CA+
Sbjct: 181 EDIEKAIETYHLMSQKYFTHASPTLFNAATPQPQLASCFLVDVSADSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYISGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLFYALW PDLFM+RV +G W+LFCP++A GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY++YE+EGR + I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGDEFDALYTKYEQEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+S+P+E AVCNLAS+ALP +V DS +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPTFV------------------DSARGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EV +++ NLNKIID+N+YP+ ++SN RHRPI +G+ GLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVVQVLVHNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ AL AS+++A K G YETY GSP+S+GILQ DMW+ TP+D WDW
Sbjct: 523 PEARQLNIQIFETIYHGALTASSDIAKKLGTYETYPGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+SL+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 ASLKAKIAETGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II + GSV I IP ++KA+YKTVWEI Q+ ++ MAADRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRNILQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GKLTS+HF W G+KTGMYYLRT AA+ I+FTVD L E
Sbjct: 703 IDQSQSLNIHLKEPTMGKLTSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLLVED 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNIA 766
>gi|403262126|ref|XP_003923446.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Saimiri boliviensis boliviensis]
Length = 792
Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/811 (64%), Positives = 648/811 (79%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++ R + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQRRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK+I NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFQKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ + +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKIKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 762 KISKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|302915563|ref|XP_003051592.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732531|gb|EEU45879.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 893
Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/789 (63%), Positives = 624/789 (79%), Gaps = 23/789 (2%)
Query: 1 MYVIKR-----DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQ 55
M+V KR DGR+E V+FDKITAR+ +L YGL +H DPV + QKV +GVY GVTT Q
Sbjct: 1 MFVRKRADNLSDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQ 60
Query: 56 LDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASL 115
LD+LAAETAA MTV HPDYA+LA R+AVSNLHK TK +S + D+Y+Y N ++ + + +
Sbjct: 61 LDDLAAETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNDRASPM 120
Query: 116 VADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVS 175
++ + YE +M++ LD AI+YDRDF + YFGFKTLERSYLLK+D ++VERPQHM+MRV+
Sbjct: 121 ISQETYECVMRHKEELDSAIVYDRDFQYQYFGFKTLERSYLLKIDGKIVERPQHMIMRVA 180
Query: 176 VGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
VGI D+ + L+TY+LMS +FTHA+PTLFNAGTPQPQLSSCFL+ MK+DSIEGIYDTL
Sbjct: 181 VGIWGDNIERVLETYNLMSSKFFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTL 240
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K CA+ISK AGGIGL++H IRA+GSYI GTNG+SNG+ PML+VFN+TARYVDQGG KR G
Sbjct: 241 KTCAMISKMAGGIGLNVHRIRATGSYIAGTNGTSNGVTPMLRVFNNTARYVDQGGNKRPG 300
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
AFAIYLEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G W+L CP++
Sbjct: 301 AFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNE 360
Query: 356 ASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKS 415
GLAD +G EFE LY +YE+ G+ + + A+KLW+ IL +Q ETG P+ML+KD CNRKS
Sbjct: 361 CPGLADCYGEEFEALYEKYEKAGKGRKTMKAQKLWYAILEAQTETGNPFMLYKDHCNRKS 420
Query: 416 NQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDS 475
NQ+NLGTI+SSNLCTEI+E+ +P+E AVCNLAS+ALP ++ +
Sbjct: 421 NQKNLGTIRSSNLCTEIIEYCAPDEVAVCNLASLALPSFI------------------NY 462
Query: 476 KNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLG 535
+DF++L EVT+ + NLN+IIDVNHYP+ R SN+RHRPIG+G+QGLAD F+ L
Sbjct: 463 DEACYDFQKLHEVTQTVVRNLNRIIDVNHYPVPEARNSNMRHRPIGVGVQGLADAFLALR 522
Query: 536 LPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS 595
+PFESPEA++LNK IFETIY+ AL AS +LA ++GPY T+ GSP S+GILQ DMWN+ PS
Sbjct: 523 MPFESPEARELNKQIFETIYHAALTASVQLAKEEGPYSTFKGSPASEGILQFDMWNVKPS 582
Query: 596 DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
D WDW SLRE + ++G RNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF V
Sbjct: 583 DLWDWESLREQVKEHGTRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQV 642
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VN LLKDL ++GLWS ++K +II ENGS+ I IP E+KA+YKTVWEI Q+ +V MAA
Sbjct: 643 VNPWLLKDLVDMGLWSDSMKNRIIAENGSIQNIPNIPAEVKALYKTVWEISQRQVVQMAA 702
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
DRG +IDQSQSLNIHM+ P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD
Sbjct: 703 DRGAFIDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQQA 762
Query: 776 LNNEKANRA 784
L AN A
Sbjct: 763 LKVADANSA 771
>gi|219110871|ref|XP_002177187.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411722|gb|EEC51650.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 814
Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/826 (62%), Positives = 650/826 (78%), Gaps = 30/826 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KR+GR+E V FDKIT+R+ KL YGL +H DPV+++QKV GVY GVTT++LDELA
Sbjct: 3 MYVLKRNGRRESVHFDKITSRVSKLCYGLDAKHVDPVIISQKVIQGVYPGVTTSELDELA 62
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+TAA+ HPDY++LA RV+VSNLHK+T FS+ ++ YNY + ++G+ ASL++++V
Sbjct: 63 AQTAASFATQHPDYSILAARVSVSNLHKMTIARFSDLVEVFYNYKHPKTGEPASLISEEV 122
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+ K+ LDGAI++ RDF++DYFGFKTLE+SYLLK+D ++ ERPQ MLMRVSVGIH
Sbjct: 123 YQIVQKHKDELDGAIVHARDFEYDYFGFKTLEKSYLLKVDGKIAERPQLMLMRVSVGIHG 182
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD ++TY+ +S+ +FTHATPTLFNAGT PQ+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 183 DDIPRVIETYNFLSERYFTHATPTLFNAGTNMPQMSSCFLMTMKEDSIDGIYDTLKNCAV 242
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL+IHN+RAS SYI GTNGSSNGIVPML+VFN+TARYVDQGGGKRKG+ AIY
Sbjct: 243 ISKYAGGIGLAIHNVRASQSYIRGTNGSSNGIVPMLRVFNNTARYVDQGGGKRKGSIAIY 302
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F FLDLRKN G E RARDLF+A+WVPDLFM+RV+D+G WSL CP++ GLA
Sbjct: 303 LEPWHADVFAFLDLRKNHGNESDRARDLFFAMWVPDLFMKRVKDNGTWSLLCPNECPGLA 362
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EG+ + I A++LWF IL+SQ+ETGTPYMLFKD CNRKSNQQNL
Sbjct: 363 DCFGDEFEALYERYEREGKVRQTIKAQQLWFAILDSQVETGTPYMLFKDHCNRKSNQQNL 422
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+++P+E AVCNLASI+L + V VP Q GS F
Sbjct: 423 GTIKCSNLCTEIVEYTAPDEAAVCNLASISLSKLV----VPGQYGQG---GS-------F 468
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L EV+ ++T+NLN+IID N YPIE RRSN+RHRPIGIG+QGLAD F +L +PF+S
Sbjct: 469 DFEKLREVSGVVTKNLNRIIDRNFYPIEEARRSNMRHRPIGIGVQGLADCFQMLRIPFDS 528
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LN DIFETIY+ A AS +LA DG YE+Y GSP SKG LQ D+WN+ PS+RWDW
Sbjct: 529 PEARKLNTDIFETIYFGACTASCDLAAVDGHYESYPGSPSSKGQLQFDLWNVQPSNRWDW 588
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+SL+ I+++G+RNSLLVAPMPTAST+QILGNNE EP+TSN+Y RRVL+GEF VVNKHL
Sbjct: 589 ASLKAKIAEHGIRNSLLVAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTVVNKHL 648
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L++LT G+W+ ++ +II ENGS+ + EIP E++ I+KTVWEI Q+ ++DMAADR Y
Sbjct: 649 LRELTARGIWTENVRNRIIAENGSIQNVPEIPVEIREIFKTVWEIPQRAILDMAADRAPY 708
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
I QSQSLN+H+ P+ KLTS+HFYAW KG+KTGMYYLRTR ADAIKFTVD L + K
Sbjct: 709 ICQSQSLNVHIADPNSKKLTSMHFYAWQKGLKTGMYYLRTRPKADAIKFTVDQEQLVSNK 768
Query: 781 ANR---ADNDVEANLA-------------QVVCSLKNQEECMACGS 810
D + +N+ Q + + ++ C++CG+
Sbjct: 769 MKEVKLVDKENSSNMVTPPPPGATAMKGTQGLTTEDEEDMCLSCGA 814
>gi|384500853|gb|EIE91344.1| hypothetical protein RO3G_16055 [Rhizopus delemar RA 99-880]
Length = 803
Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/819 (61%), Positives = 642/819 (78%), Gaps = 29/819 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGRKE V FDKIT+R+ KL YGL++++ PV ++QKV +GVY+G+TT +LD LA
Sbjct: 1 MFVIKRDGRKEKVLFDKITSRISKLCYGLNEDYVIPVKISQKVISGVYQGITTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT NHPD+A LA R+ +SNL K T + FS ++ +Y++ + + + + LV+ ++
Sbjct: 61 AETAAYMTTNHPDFATLAARIVISNLQKETDDKFSAVVQKLYHHEHPKLKQASPLVSKEL 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+++M NA+ +D AI ++RD+DF++FGFKTLERSYLLK++ R+VERPQ+M+MRV++GIH
Sbjct: 121 YDVVMANASKIDAAIKHERDYDFNFFGFKTLERSYLLKINGRIVERPQYMIMRVAIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D + A KTY LMS +FTHATPTLFNAGTP+PQLSSCFL+ M++DSIEGIYDTL CA
Sbjct: 181 GDLEGAFKTYDLMSSKYFTHATPTLFNAGTPRPQLSSCFLVQMREDSIEGIYDTLTTCAR 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+G++ IR SGSYI GTNG+SNG++PML+VFNDTAR+V QGGGKR G FA+Y
Sbjct: 241 ISKAAGGVGVAAQKIRGSGSYIAGTNGTSNGVIPMLRVFNDTARFVTQGGGKRNGNFAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+F+FLDLRKN G EE RARDLF LWVPDLFM+RV +GKWSLFCP +A GL
Sbjct: 301 LEPWHVDVFDFLDLRKNNGAEEMRARDLFLGLWVPDLFMKRVEQNGKWSLFCPDEAPGLW 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
DS+G +F+ LY +YE EG+A+ I A+KLWF IL +Q ETG PYML+KD+CN KSNQ+NL
Sbjct: 361 DSYGEKFDALYIKYENEGKARKTIEAQKLWFAILEAQTETGMPYMLYKDACNEKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI SSNLCTEI+E++SP+E AVCNLAS+ALP++V ++D+K F
Sbjct: 421 GTITSSNLCTEIIEYTSPDEVAVCNLASLALPKFV----------------NKDTKT--F 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVTK++T NLNK+IDVN+YP+E R SN+RHRPIG+G+QGLAD FIL+G PF+S
Sbjct: 463 DFAKLHEVTKVVTRNLNKVIDVNYYPVEEARNSNMRHRPIGLGVQGLADAFILMGFPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA QLN+DIFE IY+ AL+AS ELA + GPYETY GSP+S+GILQ DMWN+ SD DW
Sbjct: 523 PEAAQLNRDIFERIYFAALEASCELAKEHGPYETYLGSPISQGILQHDMWNVKDSDILDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR I K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYTRRV SGEF VVN++L
Sbjct: 583 DTLRSNIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVQSGEFQVVNQYL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L +L +LGLW+ +K +I GS+ +I IP+ LK +YKTVWEI Q+T++DMAADRG Y
Sbjct: 643 LNELVDLGLWNDNIKNMMIAHGGSIQRIPGIPDRLKELYKTVWEISQRTIIDMAADRGAY 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN-- 778
IDQSQS+N+ +P GKLTS+HFYAW KG+KTGMYYLR+R A DAIKFTVD L
Sbjct: 703 IDQSQSMNLFTAEPSFGKLTSMHFYAWKKGLKTGMYYLRSRPAVDAIKFTVDQLALKQMS 762
Query: 779 ---------EKANRADNDVEANLAQVVCSLKNQEECMAC 808
+ A A+ + LAQ+ CS+ N++ C+ C
Sbjct: 763 LSESKDDKFDSAKEAEEAEQRRLAQLQCSIDNRDACLMC 801
>gi|423328774|ref|ZP_17306581.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 3837]
gi|404604336|gb|EKB03970.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 3837]
Length = 797
Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/823 (63%), Positives = 642/823 (78%), Gaps = 39/823 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGR+EPV FDKIT R++ L Y L+ E DPV VA +V G+Y GV T++LD LA
Sbjct: 1 MYVIKRDGRREPVSFDKITDRIRILCYELN-EFVDPVKVAMRVIEGLYDGVATSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MTV HPDYALLA R+AVSNLHK TK FSET++D+Y Y N R+G++A L+ADDV
Sbjct: 60 AETAASMTVTHPDYALLAARIAVSNLHKNTKKVFSETVEDLYRYVNPRTGQEAPLIADDV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+I K++ LD IIY RDF++DYFGFKTLERSYLLK++ ++VERPQHMLMRV+VGIH
Sbjct: 120 YEVIKKHSERLDSTIIYQRDFNYDYFGFKTLERSYLLKLNGKIVERPQHMLMRVAVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DS ++TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL MKDDSIEGIYDTLK+ A
Sbjct: 180 DDIDSVIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA+GSYI GTNG+SNGIVPML+V+NDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIRGTNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F+F++LRKN GKEE RARDLF ALW+ DLFM+RV D KW+L CP++ GL
Sbjct: 300 LEPWHADVFDFIELRKNHGKEEMRARDLFLALWINDLFMQRVEADEKWTLMCPNECPGLC 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EG+ + I AR+LW +L +QIETGTPYML+KD+ N KSNQ+NL
Sbjct: 360 DVYGEEFEQLYLKYENEGKGRRTIKARELWEAVLEAQIETGTPYMLYKDAANAKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G I+SSNLCTEI+E++SP+E AVCNLASI+LP +V + F
Sbjct: 420 GVIRSSNLCTEIMEYTSPDEVAVCNLASISLPMFVEDGQ--------------------F 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ + L +VTK IT NLN++ID N+YP+E SN+RHRP+G+G+QGLAD FI++ +PF S
Sbjct: 460 NHQFLFDVTKRITRNLNRVIDRNYYPVEEAYNSNMRHRPVGLGVQGLADAFIMMRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
PEA+QLN++IFETIY+ AL AS E+A ++G Y T+ GSP+SKG Q +MW + S R
Sbjct: 520 PEAKQLNQEIFETIYFAALTASMEMAKEEGAYSTFEGSPISKGEFQYNMWGVKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+SLR+ + NGVRNSLL+APMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWASLRKEVMANGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLLKDL ELGLW+ LK +I+ NGS+ I IP +++ +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLKDLVELGLWNEDLKQEIMRANGSIQHIDFIPADIRELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQSLN+ ME ++ KLTS+HFYAW G+KTGMYYLRT++A DAIKFT LN
Sbjct: 700 GYFIDQSQSLNLFMEGANYAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFT-----LN 754
Query: 778 NEKANRAD----------NDVEANLAQVVCSLKNQEECMACGS 810
NEK + D +A L + + N E+C CGS
Sbjct: 755 NEKKANPNAIEEVEQVSVEDYQAMLQRARMAANNDEDCEMCGS 797
>gi|296217186|ref|XP_002754895.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Callithrix jacchus]
Length = 792
Score = 1098 bits (2841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/811 (64%), Positives = 648/811 (79%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++ R + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQRRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK+I NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFQKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+S+GILQ DMWN+TP+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSRGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLRMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A ++CSL+N++EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMMCSLENRDECLMCGS 792
>gi|410915400|ref|XP_003971175.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 2 [Takifugu rubripes]
Length = 795
Score = 1098 bits (2841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/814 (63%), Positives = 649/814 (79%), Gaps = 23/814 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT R++KL YGL+ E DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQEAVSFDKITFRVQKLCYGLNSEFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T +PDYA+LA R+AVSNLHK TK FS+ ++D+YNY N + + + +++ +
Sbjct: 61 AETAATLTTKYPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYVNPLNKQHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+++N L+ AIIYDRDF +++FGFKTLERSYLLK + +V ERPQHMLMRV+VGIH+
Sbjct: 121 LDIVLENKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKTNGKVAERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL M++DSIEGIYDTL +CA+
Sbjct: 181 ADIEAAIETYNLLSEKWFTHASPTLFNAGTRKPQLSSCFLLAMREDSIEGIYDTLTQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
+SKSAGGIGL++ IRA+GSYI GTNG SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 VSKSAGGIGLAVSCIRATGSYIAGTNGRSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+F FL+L+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CPS+ GL
Sbjct: 301 LEPWHSDVFAFLELKKNTGKEEQRARDLFFALWIPDLFMKRVESNQDWSLMCPSECPGLI 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE+EGRAK V+ A++LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DCWGEEFEELYTRYEKEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIVE++S +E AVCNLASIAL YV + R +
Sbjct: 421 GTIKSSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPQRTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETT---RRSNLRHRPIGIGIQGLADTFILLGLP 537
DF +LA VTKII NLNKIID+N+YP+ RSN+RHRPIGIG+QGLAD FIL+ P
Sbjct: 462 DFNKLASVTKIIVRNLNKIIDINYYPVPEVCLLLRSNMRHRPIGIGVQGLADAFILMRHP 521
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR 597
+ESPEAQ LN IFETIYY AL+AS ELA + GPYETY GSP+SKG+LQ DMW TP+D
Sbjct: 522 YESPEAQLLNIQIFETIYYAALEASCELAAEFGPYETYAGSPVSKGVLQYDMWGKTPTDL 581
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW++L+E I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIYTRRVLSGEF +VN
Sbjct: 582 WDWNALKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVN 641
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
HLLKDLTE GLWS A+K ++I NGS+ I EIP++LK +YKTVWEI QKT++ MAADR
Sbjct: 642 PHLLKDLTERGLWSDAMKNQLIAHNGSIQDIQEIPDDLKQLYKTVWEISQKTVLKMAADR 701
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G YIDQSQSLNIH+ +P +GKLTS+HFY W G+KTGMYYLRT+ AA+ I+FT++ L
Sbjct: 702 GAYIDQSQSLNIHIAEPTYGKLTSMHFYGWKLGLKTGMYYLRTKPAANPIQFTLNREKLK 761
Query: 778 NEKANRADNDV-EANLAQVVCSLKNQEECMACGS 810
++ ++ + E N+A +VCSL N++ECM GS
Sbjct: 762 EAQSAKSKEEAKERNMAAMVCSLANKDECMMYGS 795
>gi|452842681|gb|EME44617.1| hypothetical protein DOTSEDRAFT_152571 [Dothistroma septosporum
NZE10]
Length = 916
Score = 1098 bits (2841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/782 (63%), Positives = 632/782 (80%), Gaps = 18/782 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + KV AGVY GVTT QLD+LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITMKVIAGVYHGVTTIQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS ++D+Y Y N ++GKKA +++++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSAVVQDLYAYINPKTGKKAPMISEET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y +MK++ L+ AI+YDRDF++ YFGFKTLERSYLL++D +V ERPQ M+MRV+VGIH
Sbjct: 121 YATVMKHSDELNSAIVYDRDFNYQYFGFKTLERSYLLRIDGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A++TY+ MS +FTHA+PTLF+AGTPQ QL+SCFL+ MKDDSI+GIYDTLK CA+
Sbjct: 181 EDIEAAIETYNYMSLKYFTHASPTLFSAGTPQAQLASCFLVAMKDDSIDGIYDTLKICAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL +HNIRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKNAGGIGLHVHNIRATGSYIGGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+ +F+DLRKN GKEE RARDLFYALW+PDLFM+RV +G W+L CP++ GL+
Sbjct: 301 LEPWHADVMQFMDLRKNHGKEEVRARDLFYALWIPDLFMQRVEQNGTWTLMCPNECPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY +YE EG+ + + A+K+W+ IL +Q ETGTP++L+KD+ NRKSNQ+NL
Sbjct: 361 DVYGDEFKELYERYEREGKGRETVRAQKIWYAILEAQTETGTPFILYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+S+P+E AVCNLAS+ALP YV D +N +F
Sbjct: 421 GTIKSSNLCTEIMEYSAPDEVAVCNLASLALPTYV------------------DIENEVF 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTK++T NLNK I++N+YP+ R+SN RHRPIG+G+ GLAD F+ L +PF+S
Sbjct: 463 DFKKLHEVTKVVTRNLNKTIEINYYPVPEARKSNFRHRPIGLGVNGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LN IFETIY+ AL+AS ELA K GPYETY GSP+S+G LQ DMW TP+D WDW
Sbjct: 523 PEAKELNIQIFETIYHAALEASCELAEKLGPYETYPGSPVSQGELQYDMWGKTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+ I+++GVRNSLLVAPMPTASTSQI+G NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 AALKGKIAQHGVRNSLLVAPMPTASTSQIMGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL + GLWS +K +II +NGS+ +I IP++LKA+YKTVWEI Q+ +V MAADRG +
Sbjct: 643 LKDLVDRGLWSENMKNRIIADNGSIQRIPNIPDDLKALYKTVWEISQRNIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM++P GK+TS+HF W G+KTGMYYLRT+AA+ I+FTVD +L
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTQAASAPIQFTVDQEMLKVAD 762
Query: 781 AN 782
N
Sbjct: 763 TN 764
>gi|448118019|ref|XP_004203399.1| Piso0_001007 [Millerozyma farinosa CBS 7064]
gi|448120456|ref|XP_004203982.1| Piso0_001007 [Millerozyma farinosa CBS 7064]
gi|359384267|emb|CCE78971.1| Piso0_001007 [Millerozyma farinosa CBS 7064]
gi|359384850|emb|CCE78385.1| Piso0_001007 [Millerozyma farinosa CBS 7064]
Length = 860
Score = 1098 bits (2840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/774 (63%), Positives = 634/774 (81%), Gaps = 16/774 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPVRFDKITAR+++L YGL EH D V + Q+V +GVY+GV T +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARIQRLCYGLDTEHVDAVAITQRVISGVYQGVNTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T FS+ K +Y Y N ++G + +++D+
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQFSQVCKQLYEYVNPKTGLHSPMISDET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+I +NA L+ AI+YDRDF+++YFGFKTLERSYLL++D +V ERPQH++MRV+VGIH
Sbjct: 121 YEVIQRNADELNSAIVYDRDFNYNYFGFKTLERSYLLRIDGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +++Y+LMSQ +FTH +PTLFNAGTP PQ+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 EDIPRVIESYNLMSQRFFTHGSPTLFNAGTPLPQMSSCFLVAMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIRA+G+YI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRATGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV +G W+LF P++A+GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEATGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+EGR + + A+KLW+ IL +Q ETGTP+ML+KD+CN+K+NQ+NL
Sbjct: 361 DVYGDEFEELYTKYEKEGRGRSTVKAQKLWYSILEAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+SSP+E AVCNLASIALP +V +D+ + +
Sbjct: 421 GIIKSSNLCCEIVEYSSPDEVAVCNLASIALPSFVE----------------KDATSCWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FE+L EVTK++T NLN+IID N+YP+E RRSN+++RPI +G+QGLAD F+ L LPF+S
Sbjct: 465 NFEKLHEVTKVVTRNLNRIIDRNYYPVEQARRSNMKNRPIALGVQGLADAFMELRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ A+++S ELA +GPYETY GSP SKG+L D+W+ P++ WDW
Sbjct: 525 QEAKELNIQIFETIYHAAVESSVELAEIEGPYETYEGSPASKGLLSFDLWDRKPTELWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +VN ++
Sbjct: 585 DTLKQKMAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYM 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LGLW+ A+K II NGS+ + IP+E+K++YKTVWEI QK ++DMAADR Y
Sbjct: 645 LRDLVDLGLWNDAMKNNIIANNGSIQGLPNIPDEIKSLYKTVWEISQKHIIDMAADRAAY 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
IDQSQSLNIH+ P GKLTS+HFY W +G+KTGMYYLRT+AAA AI+FTVD +
Sbjct: 705 IDQSQSLNIHIRNPTMGKLTSMHFYGWKRGLKTGMYYLRTQAAAAAIQFTVDQA 758
>gi|260947674|ref|XP_002618134.1| hypothetical protein CLUG_01593 [Clavispora lusitaniae ATCC 42720]
gi|238848006|gb|EEQ37470.1| hypothetical protein CLUG_01593 [Clavispora lusitaniae ATCC 42720]
Length = 858
Score = 1098 bits (2840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/772 (64%), Positives = 630/772 (81%), Gaps = 16/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDG KEPVRFDKITAR+++L YGL +H D V V Q+V +GVY GVTT +LD LA
Sbjct: 1 MFVIKRDGHKEPVRFDKITARIQRLCYGLDSDHVDAVAVTQRVISGVYHGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T FS+ K +Y Y N ++ + +++++
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQFSQVAKILYEYINPKTDLHSPMISEET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II +NA L+ AI+YDRDF+++YFGFKTLERSYLL+++ +V ERPQH++MRV+VGIH
Sbjct: 121 YKIICENADELNSAIVYDRDFNYNYFGFKTLERSYLLRVNGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + ++TY+LMSQ +FTH +PTLFNAGTP PQ+SSCFL+ MKDDSI+GIYDTLK CA+
Sbjct: 181 NDIERVIETYNLMSQRYFTHGSPTLFNAGTPSPQMSSCFLVAMKDDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIR++G+YI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV +G W+LF P++A GLA
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EGR + + A+KLW+ IL +Q ETGTP+ML+KD+CN+K+NQ+NL
Sbjct: 361 DVYGDEFEALYEKYEREGRGRSTVKAQKLWYSILEAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+SSPEE AVCNLASIALP +V +D+ + +
Sbjct: 421 GIIKSSNLCCEIVEYSSPEEVAVCNLASIALPSFVE----------------KDASSSWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L EVTK++T NLN+IID N YP+E RRSN+R+RPI +G+QGLAD F+ L LPF+S
Sbjct: 465 NFDKLHEVTKVVTRNLNRIIDRNFYPVEEARRSNMRNRPIALGVQGLADAFMSLRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ A++AS ELA ++GPYETY GSP SKG+LQ D+W+ PS+ WDW
Sbjct: 525 QEAKELNIQIFETIYHAAVEASIELAQEEGPYETYEGSPASKGLLQYDLWDRKPSELWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +VN H+
Sbjct: 585 DTLKQNLAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPHM 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LG+W+ +K II NGS+ + +P+E+K +YKTVWEI QK ++DMAADR +
Sbjct: 645 LKDLVDLGIWNDNMKNNIIANNGSIQSLPNVPDEIKRLYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQSLNIH+ +P GKLTS+HFY W KG+KTGMYYLRT+AAA AI+FTVD
Sbjct: 705 IDQSQSLNIHIREPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVD 756
>gi|408394054|gb|EKJ73310.1| hypothetical protein FPSE_06575 [Fusarium pseudograminearum CS3096]
Length = 895
Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/784 (63%), Positives = 626/784 (79%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V+FDKITAR+ +L YGL H DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTIQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S + D+Y++ N ++ + + +++ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHWVNPKNDRASPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ LD AI+YDRDF+++YFGF+TL RSYLL++D ++ ERPQHM+MRV+VGI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFNYNYFGFRTLSRSYLLQIDGKIAERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + L+TY+LMS +FTHA+PTLFNAGTPQPQLSSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 DDIERVLETYNLMSSKFFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL+ H IRA+GSYI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNAHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G+W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVERNGEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EG+ + I A+KLW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYEREGKGRKSIKAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ +P+E AVCNLAS++LP ++ + ++ +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLSLPSFI------------------NYEDACY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++ NLNKIIDVNHYP++ R SN+RHRPIG+G+QGLAD F+ L +PFES
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDVNHYPVQEARNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNK IFETIY+ AL S +LA ++GPY T+ GSP S+GILQ DMWN+ PSD WDW
Sbjct: 523 PEARELNKQIFETIYHAALTTSVQLAKEEGPYSTFKGSPASEGILQFDMWNVKPSDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LRE + +G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 EPLREDVKTHGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS A+K +II +NGS+ I IP E+KA+YKTVWEI Q+ +V MAADRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIADNGSIQNIPNIPAEIKALYKTVWEISQRQVVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM+ P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQENLKIAD 762
Query: 781 ANRA 784
+N A
Sbjct: 763 SNSA 766
>gi|432898484|ref|XP_004076524.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Oryzias latipes]
Length = 793
Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/812 (63%), Positives = 645/812 (79%), Gaps = 21/812 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRREAVSFDKITSRIQKLCYGLNSDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N + + + +++ +
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYVNPLNKRHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
EI+++N L+ AIIYDRDF +++FGFKTLERSYLLK++ + ERPQHMLMRV+VGIHK
Sbjct: 121 LEIVLENKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKAAERPQHMLMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSI+GIYDTLK+CA+
Sbjct: 181 TDIDEAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIDGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
+SKSAGGIGL++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 VSKSAGGIGLAVSCIRATGSYIAGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV ++ WSL CPS+ GL
Sbjct: 301 LEPWHADVFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVENNQDWSLMCPSECPGLE 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY +YE+EGRAK V+ A+++W+ I+ SQ ETGTPYML+KD+CN KSNQQNL
Sbjct: 361 ECWGEEFEQLYIRYEKEGRAKRVVKAQQVWYAIIESQTETGTPYMLYKDACNGKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIVE++S +E AVCNLASIAL YV + + F
Sbjct: 421 GTIKSSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPEKTF 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LA VTK+I +NLNKIID+N+YP+ RSN RHRPIGIG+QGLAD FIL+ FES
Sbjct: 462 DFKKLASVTKVIVKNLNKIIDINYYPVAEAERSNRRHRPIGIGVQGLADAFILMRYAFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LN IFETIYY AL+AS ELA G YETY GSP+SKGILQ DMW TP+D WDW
Sbjct: 522 PEAQLLNIQIFETIYYAALEASCELAAHYGTYETYAGSPVSKGILQYDMWGKTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+ I+ +GVRNSLL+APMPTAST+QILGNNE E YTSNIYTRRVLSGEF +VN HL
Sbjct: 582 EALKAKIALHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K ++I +NGS+ +I IP +LK +YKTVWEI QKT++ MAADRG Y
Sbjct: 642 LKDLTERGLWNEDMKNQLIAQNGSIQEIEGIPADLKQLYKTVWEISQKTVLKMAADRGAY 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W G+KTGMYYLRT+ AA+ I+FT++ L +
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKLGLKTGMYYLRTKPAANPIQFTLNKEKLKEAQ 761
Query: 781 ANRADND--VEANLAQVVCSLKNQEECMACGS 810
R+ + E N A +VCSL N++EC+ CGS
Sbjct: 762 TTRSAEEELRELNNAAMVCSLANKDECLMCGS 793
>gi|18859325|ref|NP_571530.1| ribonucleoside-diphosphate reductase large subunit [Danio rerio]
gi|3914656|sp|P79732.1|RIR1_DANRE RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase
subunit M1; AltName: Full=Ribonucleotide reductase large
subunit; AltName: Full=Ribonucleotide reductase protein
R1 class I
gi|1695829|gb|AAB37102.1| ribonucleotide reductase protein R1 class I [Danio rerio]
Length = 794
Score = 1097 bits (2838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/813 (63%), Positives = 644/813 (79%), Gaps = 22/813 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDG +E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGGQEGVMFDKITSRIQKLCYGLNSDFVDPTQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA T HPDYA+LA R+AVSNLHK TK FSE ++D+YNY N + + + +++ +
Sbjct: 61 AETAATSTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNSRHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF +++FGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIAAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+G YI GTNG+SNG+VPML+V N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGRYIAGTNGNSNGLVPMLRVNNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIF+FL+L+KN GKEE RARDLFYALW+PDLFM+RV +G WSL CP+D GL
Sbjct: 301 LEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNGDWSLMCPNDCPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY++YE+EGRAK V+ A++LW+ I+ SQ ETGTPYML+KD+CNRKSN+QNL
Sbjct: 361 ECWGEEFEKLYAKYEQEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNRQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLASIAL YV + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSADEVAVCNLASIALNMYV-------------------TSERTF 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LA VTK+I +NLNKIID+N+YP++ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFQKLASVTKVIVKNLNKIIDINYYPVKEAENSNKRHRPIGIGVQGLADAFILMRFPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LN IFETIYY AL++S ELA + GPY+TY G P+SKGILQ DMW TP+D WDW
Sbjct: 522 TEAQLLNTQIFETIYYAALESSCELAAEYGPYQTYAGCPVSKGILQYDMWEKTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+E I+ +GVRNSLL+APMPTAST+QILGNNE EPYTSNIY RRVLSGEF +VN HL
Sbjct: 582 AALKEKIANDGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYHRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II +NGS+ I IP++LK +YKTVWEI QKT++ MAADRG Y
Sbjct: 642 LKDLTERGLWNEEMKNQIIAQNGSIQTIPAIPDDLKELYKTVWEISQKTILKMAADRGAY 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRT+ A+ I+FT++ L +
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPGANPIQFTLNKEKLKETQ 761
Query: 781 ANRADNDVEA---NLAQVVCSLKNQEECMACGS 810
+ D E N A +VCSL+N+ EC+ CGS
Sbjct: 762 KTTSSEDEETKERNKAAMVCSLENRHECLMCGS 794
>gi|67528364|ref|XP_661984.1| RIR1_NEUCR Ribonucleoside-diphosphate reductase large chain
(Ribonucleotide reductase large subunit) [Aspergillus
nidulans FGSC A4]
gi|40741107|gb|EAA60297.1| RIR1_NEUCR Ribonucleoside-diphosphate reductase large chain
(Ribonucleotide reductase large subunit) [Aspergillus
nidulans FGSC A4]
gi|259482810|tpe|CBF77645.1| TPA: ribonucleoside-diphosphate reductase large chain (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 865
Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/778 (64%), Positives = 626/778 (80%), Gaps = 18/778 (2%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LAAETAA
Sbjct: 21 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLAAETAAY 80
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++ K A +++ + YEI+MK
Sbjct: 81 MTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNKKPAPMISKETYEIVMK 140
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSA 186
+A L+ AI+YDRDF++++FGFKTLERSYLL++D ++ ERPQH+LMRV+VGIH +D + A
Sbjct: 141 HAEELNSAIVYDRDFNYNFFGFKTLERSYLLRLDGKIAERPQHLLMRVAVGIHGNDIERA 200
Query: 187 LKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAG 246
++TY+LMSQ +FTHA+PTLFNAGTPQPQL+SCFL+ MK+DSI+GIYDTLK CA+ISK+AG
Sbjct: 201 IETYNLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIDGIYDTLKTCAMISKTAG 260
Query: 247 GIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHA 306
GIGL++H IRA+GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIYLEPWHA
Sbjct: 261 GIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 320
Query: 307 DIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIE 366
D+FEFLDLRKN GKEE RARDLFYALW PDLFM+RV +G W+LFCP++A GLAD +G E
Sbjct: 321 DVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLADVYGDE 380
Query: 367 FEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSS 426
F+ LY QYE+EGR + I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NLGTI+SS
Sbjct: 381 FDALYEQYEKEGRGRRTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNLGTIRSS 440
Query: 427 NLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLA 486
NLCTEI+E+++P+E AVCNLAS+ALP +V D+ +DF +L
Sbjct: 441 NLCTEIIEYTAPDEVAVCNLASLALPTFV------------------DASRGEYDFGKLH 482
Query: 487 EVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQL 546
EV +++ NLNKIID+N+YP+ ++SN RHRPI +G+ GLAD F+ L LPF+S EA+QL
Sbjct: 483 EVVQVLVRNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDSAEAKQL 542
Query: 547 NKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREM 606
N IFETIY+ AL AS+ LA +DGPYE+Y GSP+S+GILQ DMW TP+D WDW +L+
Sbjct: 543 NIQIFETIYHAALTASSNLAKEDGPYESYEGSPVSQGILQYDMWERTPTDLWDWDALKAK 602
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTE 666
I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN LLKDL +
Sbjct: 603 IAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 662
Query: 667 LGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQS 726
LGLWS +K +II E GSV I IP+++KA+YKTVWEI Q+ +++MAADRG YIDQSQS
Sbjct: 663 LGLWSDNMKNRIIAEGGSVQNIPNIPDDIKALYKTVWEISQRRILEMAADRGAYIDQSQS 722
Query: 727 LNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRA 784
LNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L N A
Sbjct: 723 LNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLKVADTNVA 780
>gi|145256649|ref|XP_001401473.1| ribonucleoside-diphosphate reductase large chain [Aspergillus niger
CBS 513.88]
gi|134058380|emb|CAK38565.1| unnamed protein product [Aspergillus niger]
gi|350632026|gb|EHA20394.1| hypothetical protein ASPNIDRAFT_57102 [Aspergillus niger ATCC 1015]
Length = 865
Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/784 (64%), Positives = 630/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++ + A +++ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNNQPAPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMK+A L+ AI+YDRDF++++FGFKTLERSYLL+++ +V ERPQH+LMRV+VGIH
Sbjct: 121 YEIIMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D + A++TYHLMSQ +FTHA+PTLFNAGTPQPQL+SCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 SDIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IR++GSYI GTNG+SNG+VPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRSTGSYIGGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+FEFLDLRKN GKEE RARDLFYALW PDLFM+RV +G W+LFCP++A GLA
Sbjct: 301 LEPWHSDVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY +YE+EGR + I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGDEFDALYEKYEKEGRGRRTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLAS+ALP +V D+ +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFV------------------DAARGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EV +++ NLNKIID+N+YP+ ++SN RHRPI +G+ GLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+QLN IFETIY+ L AS++LA + G YETY GSP+S+GILQ DMW+ TP+D WDW
Sbjct: 523 AEARQLNIQIFETIYHAGLTASSDLAKEFGTYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 AALKAKIAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II E GSV I IP ++KA+YKTVWEI Q+T++ MAADRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPSDIKALYKTVWEISQRTILQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L E
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLKVED 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|402894482|ref|XP_003910385.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Papio anubis]
Length = 792
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/811 (64%), Positives = 647/811 (79%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFK RSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKVXXRSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK++ NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 NLLKENIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|395814934|ref|XP_003780992.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Otolemur garnettii]
Length = 792
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/811 (64%), Positives = 650/811 (80%), Gaps = 20/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D++NY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIH+
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHADIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++G + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGHVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTE+VE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEVVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTK+I NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLNEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 NLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWNEKMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLTMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 762 KLSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|373108816|ref|ZP_09523097.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 10230]
gi|423129514|ref|ZP_17117189.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 12901]
gi|371646061|gb|EHO11578.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 10230]
gi|371648564|gb|EHO14052.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 12901]
Length = 797
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/823 (62%), Positives = 641/823 (77%), Gaps = 39/823 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGR+EPV FDKIT R++ L Y L+ E DPV VA +V G+Y GV T++LD LA
Sbjct: 1 MYVIKRDGRREPVSFDKITDRIRILCYELN-EFVDPVKVAMRVIEGLYDGVATSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MTV HPDYALLA R+AVSNLHK TK FSET++D+Y Y N R+G++A L+ADDV
Sbjct: 60 AETAASMTVTHPDYALLAARIAVSNLHKNTKKVFSETVEDLYRYVNPRTGQEAPLIADDV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+I K+ LD IIY RDF++DYFGFKTLERSYLLK++ ++VERPQHMLMRV+VGIH
Sbjct: 120 YEVIKKHGERLDSTIIYQRDFNYDYFGFKTLERSYLLKLNGKIVERPQHMLMRVAVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DS ++TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL MKDDSIEGIYDTLK+ A
Sbjct: 180 DDIDSVIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPML+V+NDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F+F++LRKN GKEE RARDLF ALW+ DLFM+RV D KW+L CP++ GL
Sbjct: 300 LEPWHADVFDFIELRKNHGKEEMRARDLFLALWINDLFMQRVEADEKWTLMCPNECPGLC 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EG+ + I AR+LW +L +QIETGTPYML+KD+ N KSNQ+NL
Sbjct: 360 DVYGEEFEQLYLKYENEGKGRRTIKARELWEAVLEAQIETGTPYMLYKDAANAKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G I+SSNLCTEI+E++SP+E AVCNLASI+LP +V + F
Sbjct: 420 GVIRSSNLCTEIMEYTSPDEVAVCNLASISLPMFVEDGQ--------------------F 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ + L +VTK IT NLN++ID N+YP+E SN+RHRP+G+G+QGLAD FI++ +PF S
Sbjct: 460 NHQFLFDVTKRITRNLNRVIDRNYYPVEEAYNSNMRHRPVGLGVQGLADAFIMMRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
PEA+QLN++IFETIY+ AL AS E+A ++G Y T+ GSP+SKG Q +MW + S R
Sbjct: 520 PEAKQLNQEIFETIYFAALTASMEMAKEEGAYSTFEGSPISKGEFQYNMWGVKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+SLR+ + +GVRNSLL+APMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWASLRKEVMASGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLLKDL ELGLW+ LK +I+ NGS+ I IP +++ +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLKDLVELGLWNEDLKQEIMRANGSIQHIDFIPADIRELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQSLN+ ME ++ KLTS+HFYAW G+KTGMYYLRT++A DAIKFT LN
Sbjct: 700 GYFIDQSQSLNLFMEGANYAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFT-----LN 754
Query: 778 NEKANRAD----------NDVEANLAQVVCSLKNQEECMACGS 810
NEK + D +A L + + N E+C CGS
Sbjct: 755 NEKKTNPNAIEEVEQVSVEDYQAMLQRARMAANNDEDCEMCGS 797
>gi|391328008|ref|XP_003738485.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 1 [Metaseiulus occidentalis]
Length = 778
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/808 (64%), Positives = 632/808 (78%), Gaps = 32/808 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGRKEPV FDKIT+R+ KL YGL+ E D + QKV G+Y GVTT +LD+LA
Sbjct: 1 MHVLKRDGRKEPVHFDKITSRISKLCYGLNTEFVDATKITQKVIQGLYAGVTTKELDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+A+SNLHK TK FSETI + N ++GK +++++
Sbjct: 61 AETAATMTTKHPDYAVLAARIAISNLHKETKKHFSETIHILRTMSNGKTGKPMPMISEET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y +M N LD AI+YDRDF+++YFGF+TLERSYLLK+D ++VERPQHMLMRVSVGIH
Sbjct: 121 YNFVMANKDRLDSAIVYDRDFNYNYFGFRTLERSYLLKIDGKIVERPQHMLMRVSVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD ++A++TY+ MS+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIY+TL +CA+
Sbjct: 181 DDVEAAIETYNFMSEKWFTHASPTLFNAGTCRPQLSSCFLLTMKDDSIEGIYETLSQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG++IH IR +GSYI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVNIHCIRPTGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDLRKN G EE RARDLFYALW+PDLFM+RV +GKWSL CP+ GL+
Sbjct: 301 LEPWHGDIFEFLDLRKNTGIEEMRARDLFYALWIPDLFMKRVEQNGKWSLMCPNTCPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D+WG EFE LY YE+EGR I A+KLW+ IL SQIETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DTWGDEFEKLYEGYEKEGRYIRQIDAQKLWYTILESQIETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+SSP+E AVCNLAS+AL R+V + F
Sbjct: 421 GTIKCSNLCTEIVEYSSPDEIAVCNLASVALNRFVHDGA--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFERL EVTK IT NLNKIID+N+YP+ RSN RHRPIGIG+QGLAD FIL+ PF+S
Sbjct: 461 DFERLREVTKAITRNLNKIIDINYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA LN IFETIY+ AL+AS ELA G YETY G P+SKGILQ DMWN+ PSD WDW
Sbjct: 521 PEAMDLNSKIFETIYFAALEASCELAEIHGTYETYAGCPVSKGILQHDMWNVKPSDLWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LR I+++G+RNSLL+APMPTAST+QILGNNE EPYTSN+Y RRVLSGEF +VN HL
Sbjct: 581 DGLRRKIAQHGIRNSLLLAPMPTASTAQILGNNESIEPYTSNVYARRVLSGEFQIVNHHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLT+LGLW+ +K +++ NGSV + +IP++LK +Y+TVWE+ QK ++ MAADRG +
Sbjct: 641 LKDLTDLGLWNETMKNELVASNGSVQNL-DIPDKLKQLYRTVWELPQKNIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH + + GKLTS+HFY W G+KTGMYYLRT+ AA AI+FTVD + +
Sbjct: 700 IDQSQSLNIHFAETNFGKLTSMHFYGWKLGLKTGMYYLRTKPAAQAIQFTVDKTKIK--- 756
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMAC 808
+ N +VCSL N++ C++C
Sbjct: 757 --------QKNAEAMVCSLTNKDACLSC 776
>gi|452985233|gb|EME84990.1| hypothetical protein MYCFIDRAFT_214917 [Pseudocercospora fijiensis
CIRAD86]
Length = 914
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/784 (63%), Positives = 629/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + KV GVY+GVTT QLD+LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDSTAITMKVINGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK TK FS + D+Y+Y N ++ K A +++D
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVSDLYHYVNPKTRKAAPMISDYT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y ++MK+A L+ AI+YDRDF++ YFGFKTLERSYLL++D +V ERPQ M+MRV+VGIH
Sbjct: 121 YNVVMKHADELNSAIVYDRDFNYQYFGFKTLERSYLLRIDGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A++TY+ MS +FTHA+PTLF+AGTP QL+SCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 EDIEAAIETYNYMSNKYFTHASPTLFSAGTPNAQLASCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKNAGGIGLNVHRIRATGSYIGGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+ F+DLRKN GKEE RARDLF+ALW+PDLFM+RV ++G+W+L CP++ GLA
Sbjct: 301 LEPWHADVLAFMDLRKNHGKEEVRARDLFFALWIPDLFMKRVEENGEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY QYE+EGR + + A+K+W+ IL +Q ETG P++L+KD+CNRKSNQ+NL
Sbjct: 361 DVYGEEFEKLYEQYEKEGRGRETVRAQKIWYAILEAQTETGGPFILYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLASIALP YV D +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASIALPTYV------------------DIENETY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EV +++T NLNK I++NHYP+ R+SN RHRPIG+G+QGLAD F+ L +PF+S
Sbjct: 463 DFKKLHEVVQVVTRNLNKTIEINHYPVPEARKSNFRHRPIGLGVQGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LN IFETIY+ AL AS ELA K GPYETY GSP+SKG LQ DMW +TP+D WDW
Sbjct: 523 PEARRLNIQIFETIYHAALTASCELAEKLGPYETYEGSPVSKGELQYDMWGVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+ I+++GVRNSLLVAPMPTASTSQI+G NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 TALKAKIAEHGVRNSLLVAPMPTASTSQIMGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL + GLWS +K +II + GS+ +I IP++LKA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDRGLWSENMKNRIIADGGSIQRIPNIPDDLKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD +L
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEMLKVAD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNIA 766
>gi|402223227|gb|EJU03292.1| ribonucleotide reductase alpha subunit [Dacryopinax sp. DJM-731
SS1]
Length = 916
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/802 (63%), Positives = 633/802 (78%), Gaps = 23/802 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV KRD RKE V FDKITAR++KL YGL ++H DP + +KV AGVY GVTT +LD LA+
Sbjct: 3 YVFKRDRRKERVAFDKITARIQKLCYGLDQDHVDPFEITKKVIAGVYPGVTTVELDNLAS 62
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA +T HPDYA+LA R+A+SNLHK TK FS+ I+D+Y Y N ++G+ + ++A D+Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAISNLHKETKKLFSQVIEDLYTYVNPKNGRHSPMIAKDIY 122
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
+I+ +N LD AIIY+RDF +FGFKTLERSYLL+++ +V ERPQ MLMRV++GIH
Sbjct: 123 DIVQENKEVLDSAIIYERDFHHQFFGFKTLERSYLLRINGKVAERPQQMLMRVAIGIHGR 182
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D D AL TY LMS+ +FTHA+PTLFNAGTP PQLSSCFL+ MKDDSIEGIYDTLK CA+I
Sbjct: 183 DIDRALATYTLMSERYFTHASPTLFNAGTPHPQLSSCFLVAMKDDSIEGIYDTLKTCAMI 242
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK+AGGIG+ IHNIRA GSYI GTNG SNGIVPML+ ++ TARYVDQGG KR GAFAIY+
Sbjct: 243 SKTAGGIGMHIHNIRAKGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+FEFLDLRKN GKEE RARDLFYALW+ DLFM+RV DG WSLFCP++A G+++
Sbjct: 303 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWISDLFMKRVESDGDWSLFCPNEAPGMSE 362
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
+FE LY++YE EGRA+ I A+KLW+ IL++QIETG P+ML+KD+ N KSNQ+NLG
Sbjct: 363 VHSEDFEALYTRYEREGRARQTIKAQKLWYAILDAQIETGGPFMLYKDAANSKSNQKNLG 422
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+E+S+P+E AVCNLASIALP ++++ +D
Sbjct: 423 TIKSSNLCTEIMEYSAPDEVAVCNLASIALPSFIQDGQ--------------------YD 462
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
FE+L V K++ NLN+IIDVN+YP+ RRSN+RHRPIG+G+QGLAD F+ L +PF+SP
Sbjct: 463 FEKLHAVAKVVAFNLNRIIDVNYYPVPEARRSNMRHRPIGVGVQGLADAFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA+QLN+DIFETIY+ AL+AS E+A DG YET+ GSP S+G LQ D+W + PSDRWDW+
Sbjct: 523 EARQLNRDIFETIYHAALEASNEMAETDGAYETFEGSPASRGELQFDLWGVMPSDRWDWA 582
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
L+E IS+ G+RNSLL+APMPTASTSQILGNNECFEPYTS IY RRVL+GEF VV LL
Sbjct: 583 GLKEKISRTGLRNSLLLAPMPTASTSQILGNNECFEPYTSMIYARRVLAGEFQVVCPWLL 642
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
+DL +LGLW+ ++ II GS+ I IP+ +KAIYKTVWEI QK ++D+AADRG +I
Sbjct: 643 RDLVDLGLWNDQMRDMIIASGGSIQNIPGIPDNIKAIYKTVWEISQKKILDLAADRGAFI 702
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
QSQSLN+H++ P G+LTS+HFY W KG+KTGMYYLRTR AA AI+FT+D SV+ ++A
Sbjct: 703 CQSQSLNVHLQSPTLGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTLDASVI--KQA 760
Query: 782 NRADNDVEANLAQVVCSLKNQE 803
A N V A AQ V ++K ++
Sbjct: 761 KDAQNGVSAP-AQAVRAMKPRQ 781
>gi|115398293|ref|XP_001214738.1| ribonucleoside-diphosphate reductase large chain [Aspergillus
terreus NIH2624]
gi|114192929|gb|EAU34629.1| ribonucleoside-diphosphate reductase large chain [Aspergillus
terreus NIH2624]
Length = 886
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/782 (64%), Positives = 628/782 (80%), Gaps = 18/782 (2%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V DGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LAAE
Sbjct: 25 VFPADGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLAAE 84
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA MTV HPDYA+LA R+AVSNLHK TK FS I D+++Y N R+ K A +++ + YE
Sbjct: 85 TAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLFHYVNPRNNKPAPMISKETYE 144
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDD 182
+MK+A L+ AI+YDRDF++++FGFKTLERSYLL+++ +V ERPQH+LMRV+VGIH +D
Sbjct: 145 TVMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHGND 204
Query: 183 TDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIIS 242
+ A++TYHLMSQ +FTHA+PTLF+AGTPQPQL+SCFL+ MK+DSIEGIYDTLK CA+IS
Sbjct: 205 IEKAIETYHLMSQKYFTHASPTLFSAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAMIS 264
Query: 243 KSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLE 302
K+AGGIGL++H IR++GSYI GTNG+SNG+VPML+VFN+TARYVDQGG KR GAFAIYLE
Sbjct: 265 KNAGGIGLNVHRIRSTGSYIGGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIYLE 324
Query: 303 PWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADS 362
PWH+D+FEFLDLRKN GKEE RARDLFYALW PDLFM+RV +G W+LFCP++A GLAD
Sbjct: 325 PWHSDVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLADV 384
Query: 363 WGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGT 422
+G EF+ LY +YE+EGR + + A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NLGT
Sbjct: 385 YGDEFDALYEKYEKEGRGRRTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNLGT 444
Query: 423 IKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDF 482
I+SSNLCTEIVE+S+P+E AVCNLAS+ALP +V D+ +DF
Sbjct: 445 IRSSNLCTEIVEYSAPDEVAVCNLASLALPTFV------------------DATRGEYDF 486
Query: 483 ERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPE 542
+L EV +++ NLNKIID+N+YP+ R+SN+RHRPI +G+ GLAD F+ L LPF+SPE
Sbjct: 487 GKLHEVVQVLVRNLNKIIDINYYPVPEARKSNMRHRPIALGVNGLADAFLALRLPFDSPE 546
Query: 543 AQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSS 602
A+QLN IFETIY+ AL AS++LA + GPYETY GSP+S+GILQ DMW+ TP+D WDW +
Sbjct: 547 AKQLNIQIFETIYHGALTASSDLAKELGPYETYEGSPVSQGILQYDMWDRTPTDLWDWDA 606
Query: 603 LREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLK 662
L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN LLK
Sbjct: 607 LKAKIAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLK 666
Query: 663 DLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYID 722
DL +LGLWS +K +II E GSV I IP ++KA+YKTVWEI Q+T++ MAADRG +ID
Sbjct: 667 DLVDLGLWSDNMKNRIIAEGGSVQNIPNIPADIKALYKTVWEISQRTILQMAADRGAFID 726
Query: 723 QSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKAN 782
QSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L N
Sbjct: 727 QSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLKVADTN 786
Query: 783 RA 784
A
Sbjct: 787 VA 788
>gi|423133179|ref|ZP_17120826.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CIP 101113]
gi|371649235|gb|EHO14716.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CIP 101113]
Length = 797
Score = 1096 bits (2834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/823 (62%), Positives = 641/823 (77%), Gaps = 39/823 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGR+EPV FDKIT R++ L Y L+ E DPV VA +V G+Y GV T++LD LA
Sbjct: 1 MYVIKRDGRREPVSFDKITDRIRILCYELN-EFVDPVKVAMRVIEGLYDGVATSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MTV HPDYALLA R+AVSNLHK TK FSET++D+Y Y N R+G++A L+ADDV
Sbjct: 60 AETAASMTVTHPDYALLAARIAVSNLHKNTKKVFSETVEDLYRYVNPRTGQEAPLIADDV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+I K+ LD IIY RDF++DYFGFKTLERSYLLK++ ++VERPQHMLMRV+VGIH
Sbjct: 120 YEVIKKHGERLDSTIIYQRDFNYDYFGFKTLERSYLLKLNGKIVERPQHMLMRVAVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DS ++TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL MKDDSIEGIYDTLK+ A
Sbjct: 180 DDIDSVIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPML+V+NDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F+F++LRKN GKEE RARDLF ALW+ DLFM+RV D KW+L CP++ GL
Sbjct: 300 LEPWHADVFDFIELRKNHGKEEMRARDLFLALWINDLFMQRVEADEKWTLMCPNECPGLC 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EG+ + I AR+LW +L +QIETGTPYML+KD+ N KSNQ+NL
Sbjct: 360 DVYGEEFEQLYLKYENEGKGRRTIKARELWEAVLEAQIETGTPYMLYKDAANAKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G I+SSNLCTEI+E++SP+E AVCNLASI+LP +V + F
Sbjct: 420 GVIRSSNLCTEIMEYTSPDEVAVCNLASISLPMFVEDGQ--------------------F 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ + L +VTK IT NLN++ID N+YP+E SN+RHRP+G+G+QGLAD FI++ +PF S
Sbjct: 460 NHQFLFDVTKRITRNLNRVIDRNYYPVEEAYNSNMRHRPVGLGVQGLADAFIMMRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
PEA+QLN++IFETIY+ AL AS E+A ++G Y T+ GSP+SKG Q +MW + S R
Sbjct: 520 PEAKQLNQEIFETIYFAALTASMEMAKEEGAYSTFEGSPISKGEFQYNMWGVKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+SLR+ + +GVRNSLL+APMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWASLRKEVMASGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLLKDL ELGLW+ LK +I+ NGS+ I IP +++ +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLKDLVELGLWNEDLKQEIMRANGSIQHIDFIPADIRELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQSLN+ ME ++ KLTS+HFYAW G+KTGMYYLRT++A DAIKFT LN
Sbjct: 700 GYFIDQSQSLNLFMEGANYAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFT-----LN 754
Query: 778 NEKANRAD----------NDVEANLAQVVCSLKNQEECMACGS 810
NEK + D +A L + + N E+C CGS
Sbjct: 755 NEKKTNPNAIEEVGQVSVEDYQAMLQRARMAANNDEDCEMCGS 797
>gi|320593756|gb|EFX06165.1| ribonucleotide reductase large subunit [Grosmannia clavigera
kw1407]
Length = 913
Score = 1095 bits (2833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/776 (64%), Positives = 620/776 (79%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V+FDKITAR+ +L YGL EH DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDTEHIDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S I D+YNY N R+ + +++ +
Sbjct: 61 AETAAYMTVTHPDYAVLAARIAVSNLHKQTKKQWSAVITDLYNYVNPRNNTLSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ +M++ D AI+YDRDF++ YFGFKTLERSYLLK++ ++VERPQHM+MRV+VGI
Sbjct: 121 YDCVMRHKEDFDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ + ++TY+ MS +FTHA+PTLFNAGTPQ Q+SSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 DNVERVVETYNYMSNKFFTHASPTLFNAGTPQAQMSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+GSYI GTNG+SNGIVPML+V+N+TARYVDQGG KR GAF IY
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGTSNGIVPMLRVYNNTARYVDQGGNKRPGAFCIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G+W+L CP++ G+A
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEIRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGMA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EGR + + A+KLW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGRGRKTVKAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+S+P+E AVCNLAS+ALP +V D N +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPSFV------------------DYTNETY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EV +++ NLN +IDVN+YP+ + SN+RHRPIG+G+QGLAD F+ L +PFES
Sbjct: 463 DFKKLHEVAQLVVRNLNHVIDVNYYPVPEAKNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNK IFETIY+ AL AS ELA +G Y TY GSP+S+GILQ DMW++ PSD WDW
Sbjct: 523 PEARELNKQIFETIYHAALTASCELAKIEGTYSTYEGSPVSQGILQPDMWDVKPSDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SLR I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DSLRLKIKEHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II E GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM +P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQQAL 758
>gi|374288409|ref|YP_005035494.1| putative ribonucleoside-diphosphate reductase 1 subunit alpha
[Bacteriovorax marinus SJ]
gi|301166950|emb|CBW26529.1| putative ribonucleoside-diphosphate reductase 1 subunit alpha
[Bacteriovorax marinus SJ]
Length = 785
Score = 1095 bits (2833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/813 (62%), Positives = 639/813 (78%), Gaps = 31/813 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVI R G +EP++FDKIT R++ L++ L KE DP L+ KV G++ G++T +LD+LA
Sbjct: 1 MYVITRSGEREPIKFDKITERIESLAFDLDKEFIDPSLITSKVIEGIFDGISTPELDKLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
ETAA ++ HPDY+ LAGR+AVSNLHK T+ FSE IK+MYNY N +G+ A L++ ++
Sbjct: 61 GETAAYLSTQHPDYSKLAGRIAVSNLHKETRGCFSENIKEMYNYVNPATGEMAPLISKEL 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE++M+NA LD A+ RDF++DYFGFKTLERSYLLKMD ++ ERP MLMRVSVGIH
Sbjct: 121 YEVVMENAEMLDTAVDDKRDFNYDYFGFKTLERSYLLKMDGKITERPGQMLMRVSVGIHM 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +A++TY+LMS+ +FTHA+PTLFN+GT +PQLSSCFLL MKDDSIEGIYDTLK+ A+
Sbjct: 181 NDMKAAIETYNLMSEKYFTHASPTLFNSGTSKPQLSSCFLLTMKDDSIEGIYDTLKQSAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA GS+I GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISQSAGGIGLSIHNIRAKGSFIKGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FL+++KN GK+E RARDLFYALW+ DLFM+RV DG WSLFCP + G+A
Sbjct: 301 LEPWHADIFDFLEMKKNTGKDENRARDLFYALWISDLFMKRVEADGMWSLFCPHECPGMA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+++G EFE LY++YE EG+AK V+ A+ LWF +L SQIETG+PYML+KDS N KSNQ+NL
Sbjct: 361 ETYGAEFEALYTKYESEGKAKKVVRAQDLWFAVLESQIETGSPYMLYKDSINEKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+++P+E AVCNLASIAL +V D + +
Sbjct: 421 GTIKSSNLCTEIMEYTAPDEVAVCNLASIALNMFV------------------DEATKTY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L +V T NLN+IID+N+YP+ + SN+RHRPIG+G+QGLADTF + FES
Sbjct: 463 DHKKLYDVVYRATLNLNRIIDINYYPVPEAKNSNMRHRPIGLGVQGLADTFFKMRYDFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-WD 599
PEA +LN IFETIY+ AL AS +LA+KDG YETY GSPMS+G Q DMW +TPS + WD
Sbjct: 523 PEALELNNQIFETIYFAALSASKDLAMKDGAYETYEGSPMSQGQFQFDMWGVTPSAKNWD 582
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
WS+LR+ ++++GVRNSLLVAPMPTASTSQILGNNECFEP TSNIY RRVLSGEF VVNK
Sbjct: 583 WSALRKEVAEHGVRNSLLVAPMPTASTSQILGNNECFEPITSNIYVRRVLSGEFAVVNKF 642
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
L+ DL GLW ++ +II NGS+ I IPEELK +YKTVWEI QKT+++M+A R
Sbjct: 643 LVNDLIRAGLWDDKMRNEIIANNGSIQAIERIPEELKGLYKTVWEISQKTVINMSAGRAP 702
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV--DTSVLN 777
YIDQ QSLNIHM++P+ GKL+S+HFYAW G+KTGMYYLR RAA +A++FTV DT +N
Sbjct: 703 YIDQGQSLNIHMQEPNFGKLSSMHFYAWKAGLKTGMYYLRARAAVNAVQFTVKNDTPKVN 762
Query: 778 NEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
E A A +VCS++N ++C+ CGS
Sbjct: 763 KEDAQ----------AAMVCSIENPDDCVMCGS 785
>gi|367034670|ref|XP_003666617.1| hypothetical protein MYCTH_2311451 [Myceliophthora thermophila ATCC
42464]
gi|347013890|gb|AEO61372.1| hypothetical protein MYCTH_2311451 [Myceliophthora thermophila ATCC
42464]
Length = 911
Score = 1095 bits (2832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/776 (65%), Positives = 626/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGR+E V+FDKITAR+ +L YGL +H DPV + QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK +S + D+Y+Y N ++GK + ++A +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNGKPSPMIAKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ D AI+YDRDF++ YFGFKTLERSYLLK+D ++VERPQHM+MRV+VGI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ + ++TY+LMS +FTHA+PTLFNAGTPQ QLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 DNVERVIETYNLMSNKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL+IH IRA+GSYI GTNG+SNGI+PML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV +G+W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EGR + + A+KLW+ IL +Q ETG P+ML+KD CNRKSNQ+NL
Sbjct: 361 DCYGEEFEALYERYEREGRGRRTVRAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLAS+ALP++V D ++
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPQFV------------------DYNEGVY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVT+++ NLN+IID+NHYP++ SN+RHRPIG+G+QGLAD F+ L +PFES
Sbjct: 463 DFKKLHEVTQVVVRNLNRIIDINHYPVKEAYNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNK IFETIY+ AL AS +LA + GPY TY GSP+S+GILQ DMWN+ PSD WDW
Sbjct: 523 PEARELNKQIFETIYHAALTASCDLAKEQGPYSTYEGSPVSQGILQYDMWNVKPSDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+ I ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DALKAKIKEHGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II E GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM +P GK+TS+HF W G+KTGMYYLRT+AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEAL 758
>gi|221125331|ref|XP_002156185.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 1 [Hydra magnipapillata]
Length = 821
Score = 1095 bits (2832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/810 (63%), Positives = 637/810 (78%), Gaps = 10/810 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR GR+E FDKIT+R+KKL +GL ++ P + KV G+Y G+TT +LD LA
Sbjct: 18 MFVIKRGGRQEECHFDKITSRIKKLCFGLDMKYISPYAITWKVIRGMYPGITTVELDTLA 77
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA+MT HPDYALLA R+A+SNLHK TK FS+TI D+YNY + +V+++V
Sbjct: 78 AEVAASMTTKHPDYALLAARIAISNLHKETKKKFSDTIADLYNYISPEINMNCPMVSEEV 137
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+ KN LDGAII RDF++ YFGFKTLERSYLLK++ + ERPQHMLMRVSVGIH
Sbjct: 138 YQIVQKNKERLDGAIISSRDFEYHYFGFKTLERSYLLKINGKTAERPQHMLMRVSVGIHG 197
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+LMS+ WFTHA+PTLFN+GTP+PQ+SSCFLL M+ DSIEGI+DT+K+CAI
Sbjct: 198 EDLDAAIETYNLMSEKWFTHASPTLFNSGTPRPQMSSCFLLAMQSDSIEGIFDTVKQCAI 257
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL IH IR+SGSYI GTNG SNGI+PML+VFN+TARYVDQGG KR G+ AIY
Sbjct: 258 ISKWAGGIGLHIHCIRSSGSYIAGTNGHSNGIIPMLRVFNNTARYVDQGGNKRPGSIAIY 317
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI +FLDL+KN GKEE RARDLF+ LWVPDLFM RV + G WSL CP + GLA
Sbjct: 318 LEPWHADIIDFLDLKKNTGKEEQRARDLFFGLWVPDLFMRRVEEKGMWSLMCPHECPGLA 377
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EGR + I A+KLWF IL SQ ETGTPYML+KDSCNRKSNQ+NL
Sbjct: 378 DCYGEEFEELYQKYESEGRYRKQIPAQKLWFAILESQTETGTPYMLYKDSCNRKSNQKNL 437
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRY--VREKGVPVQSNVSKLVGSRDSKNR 478
GT+K SNLCTEI+E++S +E AVCNLASI++ + V + V + S +KLV K
Sbjct: 438 GTLKCSNLCTEILEYTSSDEIAVCNLASISVNSFVTVNSETVTLPSGETKLV-----KTG 492
Query: 479 LFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
++DF++L VTK+IT NLNK+ID N YP+ R SN+RHRPIGIG+QGLAD FIL+ PF
Sbjct: 493 VYDFKKLKYVTKVITRNLNKVIDRNFYPVPEARNSNMRHRPIGIGVQGLADAFILMRFPF 552
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW 598
ES EA LNK IFETIYY AL+AS ELA KDG YE+Y GSP+SKGILQ DMWN+TP++ W
Sbjct: 553 ESDEASLLNKQIFETIYYGALEASCELAEKDGTYESYQGSPISKGILQYDMWNVTPTNLW 612
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
+W+ L+ I+ +GVRNSLLVAPMPTAST+QILGNNE EPYT+NIY+RRVLSGEF VVNK
Sbjct: 613 NWAELKAKIALHGVRNSLLVAPMPTASTAQILGNNESIEPYTNNIYSRRVLSGEFQVVNK 672
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
HL+KDLT+L LW +K +I NGSV I EIP ++K +YKT WEIKQK+L++MAADRG
Sbjct: 673 HLMKDLTDLNLWDDNMKNTLIAHNGSVQNIDEIPADIKVLYKTAWEIKQKSLINMAADRG 732
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN 778
+IDQSQS N+ + +P LT++HFY W KG+KTGMYYLRT+ AA+AI+FTVD + L
Sbjct: 733 AFIDQSQSFNVFLGEPSFSTLTAIHFYGWKKGLKTGMYYLRTKPAANAIQFTVDQNKLKQ 792
Query: 779 EKANRADNDVEANLAQVVCSLKNQEECMAC 808
+ +D +L ++CSL+N+++CM+C
Sbjct: 793 SNNLKQTDD---DLKSLICSLENKDQCMSC 819
>gi|431919136|gb|ELK17888.1| Ribonucleoside-diphosphate reductase large subunit [Pteropus
alecto]
Length = 799
Score = 1094 bits (2830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/804 (64%), Positives = 644/804 (80%), Gaps = 19/804 (2%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+GR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LAAETAA
Sbjct: 15 NGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLAAETAAT 74
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
+T HPDYA+LA RVAVSNLHK TK FS+ ++D+YNY N + K + +VA +I++
Sbjct: 75 LTTKHPDYAILAARVAVSNLHKETKKVFSDVMEDLYNYINPHNSKHSPMVAKSTLDIVLA 134
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSA 186
N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIH++D ++A
Sbjct: 135 NKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHEEDIEAA 194
Query: 187 LKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAG 246
++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+ISKSAG
Sbjct: 195 IETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAG 254
Query: 247 GIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHA 306
GIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIYLEPWH
Sbjct: 255 GIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHL 314
Query: 307 DIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIE 366
DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + +WSL CP++ GL + WG E
Sbjct: 315 DIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQEWSLMCPNECPGLDEVWGEE 374
Query: 367 FEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSS 426
FE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNR+SNQQNLGTIK S
Sbjct: 375 FEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRQSNQQNLGTIKCS 434
Query: 427 NLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLA 486
NLCTEIVE++S +E AVCNLAS+AL YV + +DF++LA
Sbjct: 435 NLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTYDFKKLA 475
Query: 487 EVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQL 546
EVTK+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FIL+ PFESPEAQ L
Sbjct: 476 EVTKVIVRNLNKIIDINYYPIPEAYLSNKRHRPIGIGVQGLADAFILMRYPFESPEAQLL 535
Query: 547 NKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREM 606
NK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW L+E
Sbjct: 536 NKQIFETIYYGALEASCDLAKEHGPYETYKGSPVSKGILQYDMWNVTPTDLWDWKLLKEK 595
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTE 666
I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HLLKDLTE
Sbjct: 596 IAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTE 655
Query: 667 LGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQS 726
GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MA +RG +IDQSQS
Sbjct: 656 RGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAVERGAFIDQSQS 715
Query: 727 LNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADN 786
LNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++ +
Sbjct: 716 LNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKEKASKEE 775
Query: 787 DVEANLAQVVCSLKNQEECMACGS 810
+ E N A +VCSL+N++EC+ CGS
Sbjct: 776 EKERNTAAMVCSLENRDECLMCGS 799
>gi|365761070|gb|EHN02746.1| Rnr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 886
Score = 1094 bits (2829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/785 (63%), Positives = 634/785 (80%), Gaps = 15/785 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPV+FDKITAR+ +L YGL +H D V V Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A +T HPDYA LA R+A+SNLHK T FS+ ++D+Y Y N +GK A +++DDV
Sbjct: 61 AETCAYLTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLLK++ +V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLKINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++AL+TY+LMS +FTHA+PTLFNAGTP+PQ+SSCFL+ MK+DSIEGIYDTLK+CA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV ++G W+LF P+ A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+EGR K I A+KLW+ IL +Q ETGTP++++KD+CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRGK-TIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+ETAVCNLAS+ALP ++ S D KN +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKNSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+ K++T NLNK+ID N+YP+E R+SN+RHRPI +G+QGLADTF+LL LPF+S
Sbjct: 466 NFKKLHEIAKVVTRNLNKVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN IFETIY+ ++++S ELA +DGPYET+ GSP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNVQIFETIYHASMESSCELAQRDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LRE I+K+G+RNSL VAPMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 DALREDITKHGIRNSLTVAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W +K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 646 LRDLVDLGIWDDGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLN+ + P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKVADQAT 765
Query: 781 ANRAD 785
N AD
Sbjct: 766 ENIAD 770
>gi|358365971|dbj|GAA82592.1| ribonucleotide reductase large subunit RNR1 [Aspergillus kawachii
IFO 4308]
Length = 864
Score = 1094 bits (2829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/784 (64%), Positives = 628/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N ++ A +++ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNNAPAPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMK+A L+ AI+YDRDF++++FGFKTLERSYLL+++ +V ERPQH+LMRV+VGIH
Sbjct: 121 YEIIMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D + A++TY+LMSQ +FTHA+PTLFNAGTPQPQL+SCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 SDIEKAIETYNLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IR++GSYI GTNG+SNG+VPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNVHRIRSTGSYIGGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+FEFLDLRKN GKEE RARDLFYALW PDLFM+RV +G W+LFCP++A GLA
Sbjct: 301 LEPWHSDVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY +YE+EGR + I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGDEFDALYEKYEKEGRGRRTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+S+P+E AVCNLAS+ALP +V D+ +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFV------------------DAARGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EV +++ NLNKIID+N+YP+ ++SN RHRPI +G+ GLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+QLN IFETIY+ L AS++LA + G YETY GSP+S+GILQ DMW+ TP+D WDW
Sbjct: 523 AEARQLNIQIFETIYHAGLTASSDLAKEFGTYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DSLKAKIAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II E GSV I IP ++KA+YKTVWEI Q+T++ MAADRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPSDIKALYKTVWEISQRTILQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L E
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLKVED 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|361127300|gb|EHK99273.1| putative Ribonucleoside-diphosphate reductase large chain [Glarea
lozoyensis 74030]
Length = 993
Score = 1094 bits (2829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/776 (64%), Positives = 621/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 29 MYVWKRDGRKERVQFDKITARVSRLCYGLDTEHVDAAAITQKVISGVYQGVTTFELDNLA 88
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I D+Y+Y N R+ K + +++ +
Sbjct: 89 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVISDLYHYTNPRNKKLSPMISKET 148
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +MK+ A L+ AI+YDRDF++ YFGFKTLERSYLL++D V ERPQHM+MRV+VGIH
Sbjct: 149 YETVMKHEAELNSAIVYDRDFNYQYFGFKTLERSYLLRLDGEVAERPQHMIMRVAVGIHG 208
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A++TY+LMS +FTHA+PTLF AGTPQ QLSSCFL+ MKDDSI+GIYDTLK CA+
Sbjct: 209 EDIEAAIETYNLMSSKFFTHASPTLFAAGTPQAQLSSCFLIDMKDDSIDGIYDTLKTCAM 268
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+G+YI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 269 ISKNAGGIGLNVHRIRATGAYIAGTNGNSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 328
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FE+LDLRKN GKEE RARDLFYALW+PDLFM+RV +G W+L CP++ GLA
Sbjct: 329 LEPWHADVFEYLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEKNGDWTLMCPNECPGLA 388
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EG + I A+KLW+ IL +Q ETG P+ML+KD+CNRKSNQ+NL
Sbjct: 389 DVYGDEFEALYERYEKEGMGRKTIKAQKLWYSILEAQTETGNPFMLYKDACNRKSNQKNL 448
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+SSP+E A CNLAS+ALP +V D N +
Sbjct: 449 GTIRSSNLCTEIVEYSSPDEVACCNLASMALPTFV------------------DINNGTY 490
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +V +++ +NLNKII+VN+YP+ ++SN RHRPI +G+QGLAD F+ L LPFES
Sbjct: 491 DFQKLHDVCQVVVKNLNKIIEVNYYPVPEAKKSNFRHRPIALGVQGLADVFLALRLPFES 550
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+ LN IFETIY+ AL AS LA K G YETY GSP+SKG LQ DMW +TP+D WDW
Sbjct: 551 PEAKHLNIQIFETIYHAALTASCNLAKKLGTYETYEGSPVSKGELQYDMWGVTPTDLWDW 610
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+SL++ I ++G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 611 ASLKQEIKQHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 670
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II + GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 671 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 730
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQS+NIHM+ P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 731 IDQSQSMNIHMKDPTMGKITSMHFAGWKSGLKTGMYYLRTMAASAPIQFTVDQEAL 786
>gi|241951096|ref|XP_002418270.1| ribonucleoside-diphosphate reductase large chain 1, putative;
ribonucleotide reductase large subunit 1, putative;
ribonucleotide reductase r1 subunit 1, putative [Candida
dubliniensis CD36]
gi|223641609|emb|CAX43570.1| ribonucleoside-diphosphate reductase large chain 1, putative
[Candida dubliniensis CD36]
Length = 854
Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/776 (63%), Positives = 631/776 (81%), Gaps = 16/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPVRFDKITAR+++L YGL+ H +PV + QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLNPNHVEPVAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT HPDYA+LA R+AVSNLHK T +S+ KD+Y Y N ++G + +++ +
Sbjct: 61 AEIAATMTTIHPDYAVLAARIAVSNLHKQTTKQYSKVSKDLYEYINPKTGLHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+IIM++ L+ AI+YDRDF ++YFGFKTLERSYLL+++ +V ERPQH++MRV+VGIH
Sbjct: 121 YDIIMEHEDELNSAIVYDRDFSYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++TY+LMSQ +FTH +P LFNAGTP+PQ+SSCFLL MKDDSIEGIYDTLK CA+
Sbjct: 181 NDIPRVIETYNLMSQRFFTHGSPCLFNAGTPRPQMSSCFLLAMKDDSIEGIYDTLKSCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIR++G+YI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV +G W+LF P++A GLA
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+E R + I A+KLW+ IL +Q ETGTP+ML+KDSCN KSNQ+NL
Sbjct: 361 DVYGDEFEELYTRYEKENRGRQTIKAQKLWYAILGAQTETGTPFMLYKDSCNNKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+E AVCNLASIALP +V D N +
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFVES----------------DQSNTWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L +VTK++T NLN++ID NHYP+ RSN+RHRPI +G+QGLAD F+ L LPF+S
Sbjct: 465 NFDKLHDVTKVVTRNLNRVIDRNHYPVPEAERSNMRHRPIALGVQGLADAFMELRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ A++AS ELA ++G YETY GSP S+G+LQ D+WN P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASVELAKEEGAYETYPGSPASQGLLQFDLWNRKPTELWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +VN +L
Sbjct: 585 DTLKQNLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LG+W+ A+K+ II NGS+ + IP+E+KA+YKTVWEI QK ++DMAADR +
Sbjct: 645 LKDLVDLGVWNDAMKSSIIANNGSIQALPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIH++ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D ++
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKIV 760
>gi|392591881|gb|EIW81208.1| ribonucleotide reductase alpha subunit [Coniophora puteana
RWD-64-598 SS2]
Length = 884
Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/775 (65%), Positives = 626/775 (80%), Gaps = 20/775 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
+V KR R+E V+FDKITAR+ KL YGL + D + VA+KV AGVY+GVTT +LD LAA
Sbjct: 3 FVFKRGTRRETVQFDKITARIAKLCYGLDARYVDTIEVAKKVIAGVYQGVTTVELDNLAA 62
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA +T HPDYA+LA R+A+SNLHK TK SFS+ KD+Y Y N ++GK AS+V+ + Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAISNLHKETKKSFSQVTKDLYEYVNPKNGKLASMVSKETY 122
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
+I+ NA LD AIIY+RDF ++YFGFKTLERSYLL+++ RV ERPQHM+MRV++GIH D
Sbjct: 123 DIVQANAELLDSAIIYNRDFSYNYFGFKTLERSYLLRINGRVAERPQHMIMRVAIGIHGD 182
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D + L+TY+LMS+ +FTHA+PTLFNAGTP PQ++SCFL+CMKDDSIEGIYDTL++CA+I
Sbjct: 183 DIEHVLETYNLMSERFFTHASPTLFNAGTPHPQMASCFLVCMKDDSIEGIYDTLRQCAMI 242
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK+AGGIG++IH IRA+ SYI GTNG SNGIVPML+VF+ TARYVDQGG KR GAFAIY+
Sbjct: 243 SKTAGGIGMNIHCIRATNSYIAGTNGYSNGIVPMLRVFDSTARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWH DI +F DLRKN GKEE RARDLFYALW+ DLFM+RV D WSLFCP++A GLAD
Sbjct: 303 EPWHPDILDFCDLRKNHGKEESRARDLFYALWINDLFMKRVEADEDWSLFCPNEAPGLAD 362
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EFE LY +YE+EGRA+ + A+KLW+ IL SQIETG P+ML+KDS NRKSNQQNLG
Sbjct: 363 VWGDEFETLYLKYEKEGRARRTMPAQKLWYSILESQIETGGPFMLYKDSANRKSNQQNLG 422
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+E+SSPEETAVCNLAS+ALP ++ RD K +D
Sbjct: 423 TIKSSNLCTEIIEYSSPEETAVCNLASLALPTFI-----------------RDGK---YD 462
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F+ L +V+K++T NLN+IID N+YP+ RSN+RHRPIG+G+QGLAD F++L +PF+SP
Sbjct: 463 FKTLHDVSKVLTYNLNRIIDRNYYPVPEAERSNMRHRPIGLGVQGLADAFMILRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA++LN IFETIY+ AL+AS+ELA K GPYETY GSP +G LQ D+W +TP+D WDW+
Sbjct: 523 EARRLNLQIFETIYHAALEASSELAEKLGPYETYKGSPAEQGQLQYDLWGVTPTDLWDWT 582
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
L+ I+++G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL+GEF VV LL
Sbjct: 583 ELKAKIARHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
+DL E LW+ +K II NGSV+ I IPE++K IYKTVWEI QK ++D+AADRG +I
Sbjct: 643 RDLVERDLWNDDMKNMIIAHNGSVANIPSIPEDIKQIYKTVWEISQKVVIDLAADRGAFI 702
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
QSQSLN+H++ P +LTS+HFY W KG+KTGMYYLRTR A+ AI+FT++ SV+
Sbjct: 703 CQSQSLNVHLQAPTLRQLTSMHFYGWKKGLKTGMYYLRTRPASQAIQFTIEQSVI 757
>gi|384493683|gb|EIE84174.1| ribonucleoside-diphosphate reductase large chain [Rhizopus delemar
RA 99-880]
Length = 757
Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/776 (65%), Positives = 624/776 (80%), Gaps = 23/776 (2%)
Query: 33 HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN 92
+ DPV + QKV +GVY+GVTT +LD LAAETAA MT HPDYALLA R+A+SNLHK TK
Sbjct: 3 YVDPVAITQKVISGVYEGVTTVELDNLAAETAAYMTTRHPDYALLAARIAISNLHKETKK 62
Query: 93 SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLE 152
FS+ I+D+YNY N ++ K + +++D Y+++ NA L+ AIIYDRDF +++FGFKTLE
Sbjct: 63 VFSQVIEDLYNYVNPKTNKHSPMISDTTYKVVQDNAERLNSAIIYDRDFKYNFFGFKTLE 122
Query: 153 RSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQ 212
RSYLLK+D + ERPQH++MRV++GIH +D D+A++TY+LMS+ +FTHA+PTLFNAGTP+
Sbjct: 123 RSYLLKIDGKTAERPQHLIMRVAIGIHGEDIDAAIETYNLMSEKFFTHASPTLFNAGTPR 182
Query: 213 PQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGI 272
PQ+SSCFLL MK+DSIEGIY+TLK CA ISK+AGGIGL+IHNIRA+GSYI GTNG SNG+
Sbjct: 183 PQMSSCFLLTMKEDSIEGIYETLKICAQISKTAGGIGLNIHNIRANGSYIAGTNGYSNGL 242
Query: 273 VPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYAL 332
+PML+VFN+TARYVDQGG KR GAFA+YLEPWHADIF FLDLRKN GK+E RARDLFYAL
Sbjct: 243 LPMLRVFNNTARYVDQGGNKRPGAFAMYLEPWHADIFTFLDLRKNFGKDEIRARDLFYAL 302
Query: 333 WVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFE 392
WVPDLFM+RV+D G WSLFCP++A GL D WG EF LY YE EGRA+ I A+KLW+
Sbjct: 303 WVPDLFMQRVKDGGDWSLFCPNEAPGLQDVWGDEFVALYESYEREGRARETIKAQKLWYA 362
Query: 393 ILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALP 452
IL +Q ETG P+ML+KD+CNRKSNQQNLGTIK SNLCTEIVE++SP+E AVCNLASIALP
Sbjct: 363 ILEAQTETGNPFMLYKDACNRKSNQQNLGTIKCSNLCTEIVEYTSPDEVAVCNLASIALP 422
Query: 453 RYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRR 512
+V +R+S +DF+RL EV K+IT NLNKIID+N+YP+ R
Sbjct: 423 TFVI---------------NRES----YDFKRLHEVAKVITRNLNKIIDINYYPVIEAER 463
Query: 513 SNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPY 572
SN RHRPIG+G+QGLADTF+ L PF+SPEA+QLN IFETIY+ AL+AS ELA K GPY
Sbjct: 464 SNKRHRPIGLGVQGLADTFMALRYPFDSPEAKQLNIQIFETIYHAALEASCELAEKYGPY 523
Query: 573 ETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
ETY GSP+SKGILQ DMWN+TP+ WDW+SL+E I+K+GVRNSLL+APMPTASTSQ+LG
Sbjct: 524 ETYEGSPVSKGILQYDMWNVTPTSLWDWASLKEKIAKHGVRNSLLLAPMPTASTSQMLGF 583
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
NECFEPYTSN YTRRVLSGE+ +VN LL+DL ++G+W+ +K I+ + GSV + IP
Sbjct: 584 NECFEPYTSNFYTRRVLSGEYQMVNPWLLRDLVDMGIWNDEVKNMIMADGGSVQNVPTIP 643
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ LK +YKTVWEI Q+T+VDMAADRG YIDQSQSLNI + +P+ GKLTS+HFY W KG+K
Sbjct: 644 QHLKELYKTVWEISQRTIVDMAADRGAYIDQSQSLNIFIAEPNFGKLTSMHFYGWQKGLK 703
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
TGMYYLRTR A DAIKFTVD L + E N A +VCS+ N++ CM+C
Sbjct: 704 TGMYYLRTRPAVDAIKFTVDQVSLREYRKKME----EKNQADMVCSIDNKDACMSC 755
>gi|393231310|gb|EJD38904.1| ribonucleotide reductase alpha subunit [Auricularia delicata
TFB-10046 SS5]
Length = 871
Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/782 (64%), Positives = 622/782 (79%), Gaps = 18/782 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
+V KR KE V FDKITAR+ KL YGL EH DP+ + +KV GVY GVTT +LD LAA
Sbjct: 3 FVFKRGTPKERVAFDKITARVSKLCYGLDPEHVDPIEITKKVIDGVYAGVTTVELDNLAA 62
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA MT HPDYA+LA R+A+SNLHK TK SFS I+D YNY N ++GK A +++++ Y
Sbjct: 63 ETAAYMTTKHPDYAILAARIAISNLHKETKKSFSHVIEDCYNYVNPKNGKPAGMISEETY 122
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
++ NA LD +IIYDRDF + YFGFKTLERSYLL+++ RV ERPQHMLMRV+VGIH
Sbjct: 123 RVVKANAELLDSSIIYDRDFHYQYFGFKTLERSYLLRINGRVAERPQHMLMRVAVGIHGA 182
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D + A++TY+LMS+ +FTHA+PTLFNAGTP PQLSSCFL+ MK+DSIEGIYDTLK CA+I
Sbjct: 183 DIERAIETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVTMKEDSIEGIYDTLKTCAMI 242
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK+AGGIGL+IH IRA GSYI GTNG SNGIVPML+ ++ TARYVDQGG KR GAFAIY+
Sbjct: 243 SKTAGGIGLNIHCIRAKGSYIAGTNGHSNGIVPMLRAYDSTARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+F+FLDLRKN GKEE RARDLFYALW+PDLFM+RV ++G+WSLFCP++A GL +
Sbjct: 303 EPWHADVFDFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEENGEWSLFCPNEAPGLHE 362
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
EFE LY +YE+EGRA+ I A+KLW+ IL +QIETG P+ML+KD+CN KSNQQNLG
Sbjct: 363 VHSAEFEALYERYEKEGRARKTIPAQKLWYAILEAQIETGGPFMLYKDACNAKSNQQNLG 422
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEIVE+S+P+E AVCNLASIALP +V + + +D
Sbjct: 423 TIKSSNLCTEIVEYSAPDEVAVCNLASIALPSFVA------------------ADKQSYD 464
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L +V K++ NLNKIIDVN+YP+ RRSN+RHRPIGIG+QGLAD F++L LPF+S
Sbjct: 465 FQKLHDVAKVVARNLNKIIDVNYYPVPEARRSNMRHRPIGIGVQGLADAFMILRLPFDSA 524
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA++LN IFETIY+ AL+AS+ELA +DGPYET+ GSP +G LQ D+W TP+D WDW+
Sbjct: 525 EARKLNLQIFETIYHAALEASSELAARDGPYETWEGSPAQQGRLQYDLWGATPTDLWDWA 584
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
+L+E I++ G+RNSLL+APMPTASTSQILG NECFEPYTSNIYTRRVL+GEF VV LL
Sbjct: 585 ALKEQIAQTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVCPWLL 644
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
++L + LW +K II GSV I IP+++KAIYKTVWEI QK ++DMAADRG +I
Sbjct: 645 RELVDRRLWDDHMKNLIIANGGSVQNIPGIPDDVKAIYKTVWEISQKKVLDMAADRGAFI 704
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
QSQSLN+H++ P G+LTS+HFY W KG+KTGMYYLRTR AA AI+FTVD +VL K+
Sbjct: 705 CQSQSLNVHLQSPTTGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDAAVLKEAKS 764
Query: 782 NR 783
R
Sbjct: 765 AR 766
>gi|391328010|ref|XP_003738486.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 2 [Metaseiulus occidentalis]
Length = 783
Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/808 (64%), Positives = 631/808 (78%), Gaps = 32/808 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV KRDGRKEPV FDKIT+R+ KL YGL+ E D + QKV G+Y GVTT +LD+LA
Sbjct: 6 LYVEKRDGRKEPVHFDKITSRISKLCYGLNTEFVDATKITQKVIQGLYAGVTTKELDDLA 65
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+A+SNLHK TK FSETI + N ++GK +++++
Sbjct: 66 AETAATMTTKHPDYAVLAARIAISNLHKETKKHFSETIHILRTMSNGKTGKPMPMISEET 125
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y +M N LD AI+YDRDF+++YFGF+TLERSYLLK+D ++VERPQHMLMRVSVGIH
Sbjct: 126 YNFVMANKDRLDSAIVYDRDFNYNYFGFRTLERSYLLKIDGKIVERPQHMLMRVSVGIHG 185
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD ++A++TY+ MS+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIY+TL +CA+
Sbjct: 186 DDVEAAIETYNFMSEKWFTHASPTLFNAGTCRPQLSSCFLLTMKDDSIEGIYETLSQCAL 245
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG++IH IR +GSYI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 246 ISKSAGGIGVNIHCIRPTGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 305
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDLRKN G EE RARDLFYALW+PDLFM+RV +GKWSL CP+ GL+
Sbjct: 306 LEPWHGDIFEFLDLRKNTGIEEMRARDLFYALWIPDLFMKRVEQNGKWSLMCPNTCPGLS 365
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D+WG EFE LY YE+EGR I A+KLW+ IL SQIETGTPYML+KD+CNRKSNQQNL
Sbjct: 366 DTWGDEFEKLYEGYEKEGRYIRQIDAQKLWYTILESQIETGTPYMLYKDACNRKSNQQNL 425
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+SSP+E AVCNLAS+AL R+V + F
Sbjct: 426 GTIKCSNLCTEIVEYSSPDEIAVCNLASVALNRFVHDGA--------------------F 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFERL EVTK IT NLNKIID+N+YP+ RSN RHRPIGIG+QGLAD FIL+ PF+S
Sbjct: 466 DFERLREVTKAITRNLNKIIDINYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA LN IFETIY+ AL+AS ELA G YETY G P+SKGILQ DMWN+ PSD WDW
Sbjct: 526 PEAMDLNSKIFETIYFAALEASCELAEIHGTYETYAGCPVSKGILQHDMWNVKPSDLWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LR I+++G+RNSLL+APMPTAST+QILGNNE EPYTSN+Y RRVLSGEF +VN HL
Sbjct: 586 DGLRRKIAQHGIRNSLLLAPMPTASTAQILGNNESIEPYTSNVYARRVLSGEFQIVNHHL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLT+LGLW+ +K +++ NGSV + +IP++LK +Y+TVWE+ QK ++ MAADRG +
Sbjct: 646 LKDLTDLGLWNETMKNELVASNGSVQNL-DIPDKLKQLYRTVWELPQKNIIKMAADRGAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH + + GKLTS+HFY W G+KTGMYYLRT+ AA AI+FTVD + +
Sbjct: 705 IDQSQSLNIHFAETNFGKLTSMHFYGWKLGLKTGMYYLRTKPAAQAIQFTVDKTKIK--- 761
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMAC 808
+ N +VCSL N++ C++C
Sbjct: 762 --------QKNAEAMVCSLTNKDACLSC 781
>gi|68481362|ref|XP_715320.1| hypothetical protein CaO19.5779 [Candida albicans SC5314]
gi|68481493|ref|XP_715255.1| hypothetical protein CaO19.13201 [Candida albicans SC5314]
gi|7271006|emb|CAB77640.1| ribonucleotide reductase large subunit [Candida albicans]
gi|46436871|gb|EAK96226.1| hypothetical protein CaO19.13201 [Candida albicans SC5314]
gi|46436939|gb|EAK96293.1| hypothetical protein CaO19.5779 [Candida albicans SC5314]
Length = 854
Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/775 (63%), Positives = 632/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPVRFDKITAR+++L YGL+ H +PV + QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLNPNHVEPVAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT HPDYA+LA R+AVSNLHK T +S+ KD+Y Y N ++G + +++ +
Sbjct: 61 AEIAATMTTIHPDYAVLAARIAVSNLHKQTTKQYSKVSKDLYEYINPKTGLHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+IIM++ L+ AI+YDRDF+++YFGFKTLERSYLL+++ +V ERPQH++MRV+VGIH
Sbjct: 121 YDIIMEHEDELNSAIVYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++TY+LMSQ +FTH +P LFNAGTP+PQ+SSCFLL MKDDSIEGIYDTLK CA+
Sbjct: 181 NDIPRVIETYNLMSQRFFTHGSPCLFNAGTPRPQMSSCFLLAMKDDSIEGIYDTLKSCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIR++G+YI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV +G W+LF P++A GLA
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+E R + I A+KLW+ IL +Q ETGTP+ML+KDSCN KSNQ+NL
Sbjct: 361 DVYGDEFEELYTKYEKENRGRQTIKAQKLWYAILGAQTETGTPFMLYKDSCNNKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+E AVCNLASIALP +V D K+ +
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFVE----------------NDEKSTWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L +VTK++T NLN++ID NHYP+ RSN+RHRPI +G+QGLAD F+ L LPF+S
Sbjct: 465 NFDKLHQVTKVVTRNLNRVIDRNHYPVPEAERSNMRHRPIALGVQGLADAFMELRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ A++AS ELA ++G YETY GSP S+G+LQ D+WN P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASIELAKEEGAYETYPGSPASQGLLQFDLWNRKPTELWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +VN +L
Sbjct: 585 DTLKQDLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LG+W+ A+K+ II NGS+ + IP+E+KA+YKTVWEI QK ++DMAADR +
Sbjct: 645 LKDLVDLGVWNDAMKSSIIANNGSIQALPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQSQSLNIH++ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D +
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKI 759
>gi|339251084|ref|XP_003373025.1| ribonucleoside-diphosphate reductase large subunit [Trichinella
spiralis]
gi|316969123|gb|EFV53282.1| ribonucleoside-diphosphate reductase large subunit [Trichinella
spiralis]
Length = 833
Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/827 (62%), Positives = 637/827 (77%), Gaps = 44/827 (5%)
Query: 8 GRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAM 67
GR+E V FDKIT+R+KKL YGL+ EH +P+L++QKV AG+Y+GVTT +LD LAAE +A M
Sbjct: 27 GRREAVHFDKITSRIKKLCYGLNMEHIEPILISQKVIAGLYQGVTTVELDNLAAEISATM 86
Query: 68 TVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKN 127
T HPDYA LA R+AVSNLHK TK FS+ I D+Y + N + K + +++ V++II N
Sbjct: 87 TTKHPDYATLAARIAVSNLHKETKKVFSDVIDDLYQWINPNTNKHSPMISPKVHQIIQAN 146
Query: 128 AACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSAL 187
+ L+ I+YDRDF + YFGFKTLE+SYLLK++ +V ERPQH+LMRV++GIH+DD D+A+
Sbjct: 147 SQRLNSTIVYDRDFSYSYFGFKTLEKSYLLKINGKVAERPQHLLMRVAIGIHEDDIDAAI 206
Query: 188 KTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGG 247
+TY+LMS+ WFTHA+PTLFNAGT +PQLSSCFL+ MK DSIEGIYDTLK+CAIISKSAGG
Sbjct: 207 ETYNLMSEKWFTHASPTLFNAGTCRPQLSSCFLITMKSDSIEGIYDTLKECAIISKSAGG 266
Query: 248 IGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHAD 307
IGL++H IRASG+YI GTNG SNG++PML+VFN+TARYVDQGG KR GAFA+YLEPWHAD
Sbjct: 267 IGLNVHCIRASGTYIAGTNGYSNGLLPMLRVFNNTARYVDQGGNKRPGAFAVYLEPWHAD 326
Query: 308 IFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEF 367
IF+FLD +KN G EE RARDLFYALW+PDLFM+R+ DG WSL CP + GLAD WG EF
Sbjct: 327 IFDFLDAKKNTGVEENRARDLFYALWIPDLFMKRIEADGDWSLMCPHECPGLADLWGDEF 386
Query: 368 EHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSN 427
E LY +YE +G+ K I A++LW+ I+ SQIETGTP+M++KD+CNRKSNQQNLGTIK SN
Sbjct: 387 EKLYEKYEAQGKHKRRIKAQQLWYAIIESQIETGTPFMVYKDACNRKSNQQNLGTIKCSN 446
Query: 428 LCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAE 487
LCTEIV++SSP+ET+VCNLASIAL ++V NV+K R FDF +LAE
Sbjct: 447 LCTEIVQYSSPDETSVCNLASIALNKFV---------NVAK---------REFDFAKLAE 488
Query: 488 VTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLN 547
VTK++T NLNKIID N+YP+ +SN RHRPIGIG+QGLAD FIL+ PFES EA+ LN
Sbjct: 489 VTKVVTVNLNKIIDRNYYPVAVAEKSNKRHRPIGIGVQGLADAFILMRYPFESEEARLLN 548
Query: 548 KDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMI 607
K IFETIYY AL++S +LA + GPYETY GSP SKGILQ DMWN+ P+D WDW SL+ I
Sbjct: 549 KKIFETIYYAALESSCDLAKQFGPYETYQGSPASKGILQYDMWNVQPTDLWDWESLKCRI 608
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTEL 667
K G+RNSLL+APMPTAST+QILGNNE E YTSN+YTRRVLSGEF +VN HL+KDL EL
Sbjct: 609 EKYGLRNSLLLAPMPTASTAQILGNNESVEAYTSNVYTRRVLSGEFQIVNHHLMKDLVEL 668
Query: 668 GLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSL 727
GLW +LK +II GS+ I IP E++ +YKTVWEI QK ++DMAA+RG +IDQSQSL
Sbjct: 669 GLWDESLKNEIIANKGSIQSIESIPAEIRELYKTVWEISQKCVIDMAAERGAFIDQSQSL 728
Query: 728 NIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL---------NN 778
NIH+ +P++ KLTS+HFY W KG+KTGMYYLRT+ A AI+FTVD L
Sbjct: 729 NIHIAEPNYAKLTSMHFYGWKKGLKTGMYYLRTKPAVTAIQFTVDKLALKQKKTKEEEEG 788
Query: 779 EKANRA---------------DNDVEANLAQVVCSLKNQEECMACGS 810
++ N N+V A L Q C L+N ECM C S
Sbjct: 789 QRPNGGYVDKSRKFPTSGDNWSNNVNALLQQ--CRLENGNECMLCSS 833
>gi|238882110|gb|EEQ45748.1| ribonucleoside-diphosphate reductase large chain [Candida albicans
WO-1]
Length = 854
Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/775 (63%), Positives = 632/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPVRFDKITAR+++L YGL+ H +PV + QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLNPNHVEPVAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT HPDYA+LA R+AVSNLHK T +S+ KD+Y Y N ++G + +++ +
Sbjct: 61 AEIAATMTTIHPDYAVLAARIAVSNLHKQTTKQYSKVSKDLYEYINPKTGLHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+IIM++ L+ AI+YDRDF+++YFGFKTLERSYLL+++ +V ERPQH++MRV+VGIH
Sbjct: 121 YDIIMEHEDELNSAIVYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++TY+LMSQ +FTH +P LFNAGTP+PQ+SSCFLL MKDDSIEGIYDTLK CA+
Sbjct: 181 NDIPRVIETYNLMSQRFFTHGSPCLFNAGTPRPQMSSCFLLAMKDDSIEGIYDTLKSCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIR++G+YI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV +G W+LF P++A GLA
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+E R + I A+KLW+ IL +Q ETGTP+ML+KDSCN KSNQ+NL
Sbjct: 361 DVYGDEFEELYTKYEKENRGRQTIKAQKLWYAILGAQTETGTPFMLYKDSCNNKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+E AVCNLASIALP +V D K+ +
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFVE----------------NDEKSTWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L +VTK++T NLN++ID NHYP+ RSN+RHRPI +G+QGLAD F+ L LPF+S
Sbjct: 465 NFDKLHQVTKVVTRNLNRVIDRNHYPVPEAERSNMRHRPIALGVQGLADAFMELRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ A++AS ELA ++G YETY GSP S+G+LQ D+WN P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASIELAKEEGAYETYPGSPASQGLLQFDLWNRKPTELWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +VN +L
Sbjct: 585 DTLKQDLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LG+W+ A+K+ II NGS+ + IP+E+KA+YKTVWEI QK ++DMAADR +
Sbjct: 645 LKDLVDLGVWNDAMKSSIIANNGSIQALPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQSQSLNIH++ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D +
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKI 759
>gi|195403619|ref|XP_002060363.1| GJ14594 [Drosophila virilis]
gi|194140867|gb|EDW57333.1| GJ14594 [Drosophila virilis]
Length = 818
Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/826 (61%), Positives = 643/826 (77%), Gaps = 35/826 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YVIKRDGRKE + FDKIT+R++KL Y L+ + DPV + KV G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRKEEIHFDKITSRVQKLCYNLNMDFVDPVSITLKVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA++T +H DYALLA R+AVSNLHK T+ FS+ +D+Y + N+ + + + +V++
Sbjct: 72 AEIAASLTTHHADYALLAARIAVSNLHKETRKVFSDVFEDLYKHVNRETNETSPMVSEYH 131
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+ N+ L+ AIIYDRDF ++YFGFKTLERSYLLK++ ++ ERPQHMLMRV++GIH
Sbjct: 132 YNIVANNSDRLNSAIIYDRDFGYNYFGFKTLERSYLLKINGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DSA++TY+L+S+ +FTHA+PTLF A T +PQLSSCFLL M DSIEGI+ T+++CA+
Sbjct: 192 DDIDSAIETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMASDSIEGIFKTVEQCAM 251
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA G+ I GTNG+SNG+VPML+VFN+ ARYVDQGGGKR GAFAIY
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSISGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+FEFLDL+KN GKEE RARDLFYALW+PDLFM+RV + WSL CP GL
Sbjct: 312 LEPWHSDVFEFLDLKKNTGKEEHRARDLFYALWIPDLFMKRVEANEDWSLMCPHKCPGLQ 371
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY +YE+EGR ++ A+ LWF I+ SQ+ETGTPYMLFKDSCNRKSNQQN+
Sbjct: 372 DVWGEEFEKLYVKYEKEGRQNRIVKAQSLWFAIIESQVETGTPYMLFKDSCNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+S+P+E AVCNLASIAL +V + + +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV-------------------TAEKSY 472
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +VTKI+T+NLNKIID+N+YP+ ++SNLRHRPIGIG+QG AD IL+ P+ES
Sbjct: 473 DFKKLKDVTKIVTKNLNKIIDINYYPLPEAKKSNLRHRPIGIGVQGFADALILMRFPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA LN+ IFETIYY AL+AS EL+ KDGPYETY GSP+SKG+LQ DMWN +P+D WDW
Sbjct: 533 EEASLLNQQIFETIYYGALEASCELSKKDGPYETYIGSPVSKGVLQYDMWNRSPTDLWDW 592
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+ I ++GVRNSLL+APMPTAST+QI+GNNE FEPYTSNIYTRRVLSGEF VVN HL
Sbjct: 593 DHLKRSIKQHGVRNSLLIAPMPTASTAQIMGNNESFEPYTSNIYTRRVLSGEFQVVNPHL 652
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLTEL LW +K +II GS+ I IPEE++ +YKTVWEI K+ + MAADRG +
Sbjct: 653 LRDLTELDLWDDEMKNQIIASRGSIQNIESIPEEIRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV----L 776
IDQSQS NIH+ +P++GKLTS+HFY+W G+KTGMYYLRT+ AA+AI+FTVD +V +
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVDKNVSVVEI 772
Query: 777 NNEK------------ANRADNDVEANLAQVVCSLKNQEECMACGS 810
N + N +D + E +AQ++CSL+N++ C++CGS
Sbjct: 773 NAQNFVDQHASMEMGDTNESDIERERRMAQMICSLENKDACLSCGS 818
>gi|242765906|ref|XP_002341068.1| ribonucleotide reductase large subunit Rnr1, putative [Talaromyces
stipitatus ATCC 10500]
gi|218724264|gb|EED23681.1| ribonucleotide reductase large subunit Rnr1, putative [Talaromyces
stipitatus ATCC 10500]
Length = 873
Score = 1093 bits (2826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/784 (63%), Positives = 629/784 (80%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKE V+FDKITAR+ +L YGL +H D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I+D+Y+Y N ++ K A +++ ++
Sbjct: 61 AETAAYMTVTHPDYAVLAARIAVSNLHKQTKKQFSAVIEDLYHYVNPKNNKAAPMISPEM 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +MK+A L+ AI+YDRDF++ YFGFKTLERSYLL+++ +V ERPQHM+MRV+VGIH
Sbjct: 121 YETVMKHADELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
++ + A++TY+LMSQ +FTHA+PTLFNAGTP+PQL+SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 ENIEKAIETYNLMSQKYFTHASPTLFNAGTPRPQLASCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IR++GSYI GTNG+SNG+VPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGLNVHRIRSTGSYIGGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+FEFLDLRKN GKEE RARDLFYALW PDLFM RV + W+LFCP++A GLA
Sbjct: 301 LEPWHSDVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMRRVEANQDWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY +YE+EGR + + A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGEEFDALYEKYEKEGRGRRTVKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ +P+E AVCNLAS+ALP +V D+ +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPTFV------------------DTARGEY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVT+++ NLNKIID+N+YP+ ++SN RHRPI +G+ GLAD F+ L LPF+S
Sbjct: 463 DFGKLHEVTQVLVRNLNKIIDINYYPVPEAKKSNFRHRPIAVGVNGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ AL AS ELA + G YETY GSP+S+GILQ DMW+ TP+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHGALTASIELAKEYGTYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+ I ++G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DALKAQIREHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLWS +K +II E GSV I IP ++KA+YKTVWEI Q++++ MAADRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPADIKALYKTVWEISQRSILQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L +
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLKVQD 762
Query: 781 ANRA 784
N A
Sbjct: 763 TNVA 766
>gi|393229615|gb|EJD37235.1| hypothetical protein AURDEDRAFT_147076 [Auricularia delicata
TFB-10046 SS5]
Length = 860
Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/767 (65%), Positives = 619/767 (80%), Gaps = 20/767 (2%)
Query: 10 KEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTV 69
KE V+FDKITAR+ KL YGL +H DP+ + +KV +GVY+GVTT +LD LAAETAA +T
Sbjct: 21 KERVQFDKITARIAKLCYGLDMDHVDPIEITKKVISGVYQGVTTVELDNLAAETAAYLTT 80
Query: 70 NHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAA 129
HPDYA+LA R+A+SNLHK TK +FS+ I+D+Y Y N ++GK A L++++ Y+++ +NA
Sbjct: 81 KHPDYAILAARIAISNLHKETKKNFSQVIEDLYRYVNPKNGKAAGLISEETYQVVKENAE 140
Query: 130 CLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKT 189
LD AIIYDRDF++ YFGFKTLERSYLL+++ RV ERPQHM+MRV+VGIH D + A++T
Sbjct: 141 LLDSAIIYDRDFNYQYFGFKTLERSYLLRLNGRVAERPQHMIMRVAVGIHGRDIERAIQT 200
Query: 190 YHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIG 249
Y+LMS+ +FTHA+PTLF AGTP+PQLSSCFL+ MKDDSIEGIYDTLK CA+ISKSAGGIG
Sbjct: 201 YNLMSERYFTHASPTLFAAGTPRPQLSSCFLVAMKDDSIEGIYDTLKACAMISKSAGGIG 260
Query: 250 LSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIF 309
L+IHNIRA GSYI GTNG SNG+VPML+ F+ TARYVDQGG KR GAFAIYLEPWH D+F
Sbjct: 261 LNIHNIRAKGSYIAGTNGVSNGLVPMLRAFDSTARYVDQGGNKRPGAFAIYLEPWHPDVF 320
Query: 310 EFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEH 369
EFLDLRKN GKEE RARDLFYALW+PDLFM+RV +G+WSLFCP++A GL + EFE
Sbjct: 321 EFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANGEWSLFCPNEAPGLHEVHSAEFEA 380
Query: 370 LYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLC 429
LY +YE+EGRA+ I A+KLW+ IL +QIETG P+ML+KD+ N KSNQQNLGTIKSSNLC
Sbjct: 381 LYERYEKEGRARKTIPAQKLWYAILEAQIETGGPFMLYKDAANAKSNQQNLGTIKSSNLC 440
Query: 430 TEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVT 489
TEI+E+SSP+ETAVCNLASIALP ++ N +DF++L ++
Sbjct: 441 TEIIEYSSPDETAVCNLASIALPSFI--------------------SNGKYDFQKLHDIA 480
Query: 490 KIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKD 549
KI+ NLN+IIDVN+YP+ RRSN+RHRPIGIG+QGLAD F+ L LPF+ PEA++LN
Sbjct: 481 KIVAFNLNRIIDVNYYPVPEARRSNMRHRPIGIGVQGLADAFMALRLPFDGPEARKLNLQ 540
Query: 550 IFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISK 609
IFETIY+ AL+AS+E+A DGPYET+ GSP +G LQ D+W +TP+D WDW+SL+E I++
Sbjct: 541 IFETIYHAALEASSEMAEADGPYETWEGSPAQQGKLQYDLWGVTPTDLWDWASLKERIAR 600
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGL 669
G+RNSLL+APMPTA TSQILG NECFEPYTSNIYTRRVL+GEF +V LLK+L LGL
Sbjct: 601 TGLRNSLLLAPMPTAGTSQILGFNECFEPYTSNIYTRRVLAGEFQIVCPWLLKELVALGL 660
Query: 670 WSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNI 729
W +K II GSV I IP+++KAIYKTVWEI QK ++D+AADRG +I QSQSLN+
Sbjct: 661 WDDRMKNMIIANGGSVQNIPGIPDDVKAIYKTVWEISQKKVLDLAADRGAFICQSQSLNV 720
Query: 730 HMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
H++ P G+LTS+HFY W KG+KTGMYYLRTR AA AI+FTVD SVL
Sbjct: 721 HLQSPTTGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSVL 767
>gi|406672896|ref|ZP_11080121.1| ribonucleoside-diphosphate reductase, alpha subunit [Bergeyella
zoohelcum CCUG 30536]
gi|405587440|gb|EKB61168.1| ribonucleoside-diphosphate reductase, alpha subunit [Bergeyella
zoohelcum CCUG 30536]
Length = 777
Score = 1092 bits (2823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/810 (63%), Positives = 641/810 (79%), Gaps = 33/810 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G+KE V FDKITAR+ KL YGLS D + +A+KV G+Y VTTT+LD LA
Sbjct: 1 MFVIKRNGKKEAVHFDKITARIHKLIYGLSISEKDVIEIAKKVIQGIYDNVTTTELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAA T HPD+++LA R+AVSNLHK T SFS+T + +Y Y + + A L+++++
Sbjct: 61 AETAAAQTTIHPDFSVLAARIAVSNLHKNTLKSFSKTAQLLYEYTDPITQTHAPLISEEI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II KNA LD ++IYDRD++FDYFGFKTLERSYL++ + +V ERPQH+ MRV++GIHK
Sbjct: 121 YKIIRKNADELDSSLIYDRDYNFDYFGFKTLERSYLIRTNGKVTERPQHLFMRVALGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +A++TY+LMS+ WF HATPTLFNAGTP+PQ+SSCFLL M +DSI GI+DTLK+CA+
Sbjct: 181 EDIQAAIETYNLMSEKWFIHATPTLFNAGTPKPQMSSCFLLSMTEDSIAGIFDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIG+SIHNIR++GSYI GT G SNGI+PML+VFNDTARYVDQGGGKRKGA A+Y
Sbjct: 241 ISQSAGGIGVSIHNIRSTGSYIKGTGGISNGIIPMLRVFNDTARYVDQGGGKRKGAIAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+DIFEFLD+RKN GKEE RARDLF ALW+PDLFM+RV D WSLF P++A GL
Sbjct: 301 IEPWHSDIFEFLDIRKNHGKEEMRARDLFPALWIPDLFMQRVETDQMWSLFDPNEAQGLY 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G +F LY+ YE EG+ + I AR+LW IL +QIETGTPYM +KD+ N KSNQ+N+
Sbjct: 361 DVYGEKFNELYTTYENEGKFRKQIKARELWTAILEAQIETGTPYMCYKDAVNEKSNQKNI 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+++ +E AVCNLAS+ALPRYV +KG F
Sbjct: 421 GTIRSSNLCTEIMEYTNADEVAVCNLASLALPRYVSDKG--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTKI+T NLNKIID N+YPI T+ SN RHRPIG+G+QGLAD F+LL LPFES
Sbjct: 461 DFQKLYEVTKIVTRNLNKIIDGNYYPIPQTKTSNDRHRPIGLGVQGLADVFLLLRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A++LNKDIFETIY+ +++AS ELA + G Y ++ GSP+S+G Q D+W I PSDRWDW
Sbjct: 521 EAARKLNKDIFETIYFASMEASMELAKEQGAYSSFAGSPLSEGKFQFDLWQIAPSDRWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LR + +GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVLSGEF+VVNK L
Sbjct: 581 EKLRNEVMTHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEFVVVNKFL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ELGLW+ +K K+I ENGSV I EIP ELK +YKTVWEIKQKT++DMAA+RG +
Sbjct: 641 LKDLIELGLWNPTMKNKLIAENGSVQNIPEIPTELKELYKTVWEIKQKTIIDMAAERGAF 700
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
I QSQSLN+ M +P+ KLTS+HF+AW G+KTGMYYLRT+AA DAIKFTVDT +L+ +
Sbjct: 701 ICQSQSLNLFMAEPNFAKLTSMHFHAWKSGLKTGMYYLRTKAAVDAIKFTVDTQILSGQ- 759
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+Q CSL N EEC+ACGS
Sbjct: 760 ------------SQAACSLDNPEECLACGS 777
>gi|383451661|ref|YP_005358382.1| Ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
indicum GPTSA100-9]
gi|380503283|emb|CCG54325.1| Ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
indicum GPTSA100-9]
Length = 795
Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/816 (62%), Positives = 647/816 (79%), Gaps = 27/816 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGRKEPV FDKIT R++ L Y L+ E DPV VA +V G+Y GVTT++LD LA
Sbjct: 1 MYVVKRDGRKEPVSFDKITDRIRILCYELN-ERVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MTV HPD+A LA R+AVSNLHK TK SFSET+ D+Y+Y N R+GKK+ L+ADDV
Sbjct: 60 AETAASMTVTHPDFAQLAARIAVSNLHKNTKKSFSETMLDLYHYVNPRTGKKSPLLADDV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+IM NA LD IIY+RDF++DYFGFKTLERSYLLK++ ++VERPQHMLMRVSVGIH
Sbjct: 120 YEVIMANAEKLDSTIIYNRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY LMS+ +FTHATPTLFNAGTP+PQ+SSCFLL MKDDSI+GIYDTLK+ A
Sbjct: 180 NDIDAAIETYELMSKKFFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FLDL+KN GKEE RARDLFYA+W+ DLFM+RV D W+L CP++ GL
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWISDLFMKRVEADANWTLMCPNECPGLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY YE G+ + I AR+LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 DVYGDEFDALYESYESAGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++S +E AVCNLASI+LP ++ +N F
Sbjct: 420 GTIRSSNLCTEILEYTSEDEIAVCNLASISLPMFI--------------------ENGQF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ + L +VTK IT NLN++ID N+YP+E SN+RHRP+G+G+QGLAD FI+L +PF S
Sbjct: 460 NHDHLYKVTKRITRNLNRVIDRNYYPVEEAYNSNMRHRPVGLGVQGLADAFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD---R 597
EA+QLN++IFETIY+ A+ AS ELA ++GPY T+ GSP+S+G Q +MW + SD R
Sbjct: 520 DEAKQLNQEIFETIYFAAVTASMELAKEEGPYSTFKGSPISQGEFQYNMWGLQDSDLSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDWSSLR+ + ++GVRNSLL+APMPTASTSQILGNNE FEPYTSN+YTRRVLSGEFIVVN
Sbjct: 580 WDWSSLRKEVMEHGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNLYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL ELG+W+ LK +I+ NGS+ I+ IP+++K +Y+TVWE+ + ++DM+ R
Sbjct: 640 KHLLQDLVELGIWNEELKQEIMRNNGSIQNIAGIPQDIKDLYRTVWEMSMRDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQSLN+ ME KL S+HFYAW G+KTGMYYLRT+AAA+A++FTV +
Sbjct: 700 GYFIDQSQSLNLFMEGATIAKLNSMHFYAWKSGLKTGMYYLRTKAAANALQFTVAKKQES 759
Query: 778 NEKANRADNDVEA-NLAQVVCSLKNQ--EECMACGS 810
+ + + ++ A ++ KN E+C CGS
Sbjct: 760 EPEVVQVEQEMTAEEFRAMIERSKNAGPEDCEMCGS 795
>gi|321471172|gb|EFX82145.1| hypothetical protein DAPPUDRAFT_302612 [Daphnia pulex]
Length = 798
Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/817 (63%), Positives = 648/817 (79%), Gaps = 26/817 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KR GR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MFVLKRGGRQEDVHFDKITSRIQKLCYGLNSDFVDPTAITMKVINGLYPGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK TK FSE I D+YN NK + K +++D
Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKETKKVFSEVIDDLYNMKNKITKKPTPMISDFH 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ II K++ L+ AIIYDRDF+F+YFGFKTLE+SYLLK+D + VERPQH++MRVSVGIH
Sbjct: 121 HGIITKHSDKLNSAIIYDRDFNFNYFGFKTLEKSYLLKIDGKPVERPQHLMMRVSVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLF A TP+PQLSSCFLL MKDDSI+GIY+TLK+CAI
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFYAATPRPQLSSCFLLTMKDDSIDGIYETLKQCAI 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA+GSYI GTNG SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGLNVHCIRATGSYIAGTNGISNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+F+FLDL+KN GKEE RARDLFYALW+PDLFM RV DG WSL CP + GLA
Sbjct: 301 LEPWHSDVFDFLDLKKNTGKEENRARDLFYALWIPDLFMRRVESDGDWSLMCPHECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D+WG EFE LY++YEE G + + A++LWF ++ SQIETGTPY+L+KD+CNRKSNQQNL
Sbjct: 361 DTWGEEFEALYTKYEESGMYRRKVKAQQLWFAVIESQIETGTPYILYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+SSPEE AVCNL SIAL +V+ ++ F
Sbjct: 421 GTIKCSNLCTEIVEYSSPEEVAVCNLGSIALNMFVK-------------------PDKTF 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D +L EVTK++T NLNKII++N+YP+ +RSN RHRPIGIG+QGLAD FIL+ PF+S
Sbjct: 462 DIPKLKEVTKVLTRNLNKIIEINYYPVPEAKRSNFRHRPIGIGVQGLADAFILMRYPFDS 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA + G YE+Y G P+SKGILQ DMW +TP+D WDW
Sbjct: 522 EEAQLLNKHIFETIYYGALEASCELAEQLGTYESYPGCPVSKGILQYDMWGVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L++ I+++G+RNSLL+APMPTAST+QILGNNE E YTSNIY RRVLSGEF VVN HL
Sbjct: 582 AALKKKINEHGLRNSLLLAPMPTASTAQILGNNESIEAYTSNIYVRRVLSGEFQVVNHHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLTE GLW+ +K II NGS+ I IP++LKA+YKTVWEI Q+ ++ MAADRG +
Sbjct: 642 LRDLTEGGLWNEDVKNGIIANNGSIQNIDGIPDDLKALYKTVWEIPQRIVIKMAADRGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL---- 776
IDQSQSLNIH+ +P++GKLTS+HFY+W G+KTGMYYLRT+ AA AI+FTVD S L
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYSWKLGLKTGMYYLRTKPAASAIQFTVDKSKLKKMN 761
Query: 777 ---NNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
N+ A +++ + N +VCSL+N+++C+ CGS
Sbjct: 762 GVDNSAGATNGNDEEKRNREAMVCSLQNRDDCLMCGS 798
>gi|146298284|ref|YP_001192875.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
johnsoniae UW101]
gi|146152702|gb|ABQ03556.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
johnsoniae UW101]
Length = 797
Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/822 (63%), Positives = 646/822 (78%), Gaps = 37/822 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDG +EPV FDKIT R+KKL YGL+ E DPV VA +V G+Y GV+T++LD LA
Sbjct: 1 MYVVKRDGHREPVMFDKITERIKKLCYGLN-ELVDPVKVAMRVIEGLYDGVSTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT+ HPDYA LA RVA+SNLH TK SFSET+KDMYNY N R+G+ A L+ADDV
Sbjct: 60 AETAASMTIAHPDYAQLAARVAISNLHSNTKKSFSETMKDMYNYVNPRNGQDAPLIADDV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I +NAA LD IIY RDF++DYFGFKTLERSYLLK++ ++VERPQHMLMRVSVGIH
Sbjct: 120 YKVIQENAAFLDSHIIYTRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD S ++TY LMS+ +FTHATPTLFNAGTP+PQ+SSCFLL M+DDSI+GIYDTLK+ A
Sbjct: 180 DDLKSVIETYDLMSKKFFTHATPTLFNAGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+E WHADIF+FLDL+KN GKEE RARDLF+A+W DLFM+RV++D W+L CP++ GL
Sbjct: 300 IETWHADIFDFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVQEDSTWTLMCPNECPGLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY+ YE G+ + I AR+LW +IL SQIETGTPYML+KD+ NRKSN +NL
Sbjct: 360 DVYGDEFEALYTDYEFRGKGRKTIRARELWEKILESQIETGTPYMLYKDAANRKSNHKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+EF+S +E AVCNLASI+LP ++ N F
Sbjct: 420 GTIRSSNLCTEIMEFTSKDEIAVCNLASISLPMFI--------------------DNGEF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L VTK +T NLNK+ID N+YP++ SN+RHRP+G+G+QGLAD FI+L +PF S
Sbjct: 460 DHQALYNVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPVGLGVQGLADAFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA++LN++IFET+Y+ A+ AS E+A ++GPY T+ GSPMS+G Q +MW + S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEMAKEEGPYSTFEGSPMSQGEFQYNMWGMKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+SLR+ + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWASLRKEVVEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL +LGLW+ LK +I+ NGSV I +IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVKLGLWNEDLKQEIMRHNGSVQNIDKIPQDLKDLYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQSLN+ M+ ++ KLTS+HFYAW G+KTGMYYLRT+AA DAIKFT++ N
Sbjct: 700 GYFIDQSQSLNLFMQDANYSKLTSMHFYAWQSGLKTGMYYLRTKAAVDAIKFTLN----N 755
Query: 778 NEKANRADNDVEANLAQVVCSLK---------NQEECMACGS 810
++K A + V+ A V K + E+C CGS
Sbjct: 756 DKKEETAPSLVQETEAISVEDYKAMLLKAQAADPEDCEMCGS 797
>gi|116283230|gb|AAH03299.1| Rrm1 protein [Mus musculus]
Length = 762
Score = 1091 bits (2821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/772 (66%), Positives = 626/772 (81%), Gaps = 19/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +G+ + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVASST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+M N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVMANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+LAEVTK+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFEKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS ELA + GPYETY GSP+SKGILQ DMWN+ P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 KPLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLN 753
>gi|367005841|ref|XP_003687652.1| hypothetical protein TPHA_0K00840 [Tetrapisispora phaffii CBS 4417]
gi|357525957|emb|CCE65218.1| hypothetical protein TPHA_0K00840 [Tetrapisispora phaffii CBS 4417]
Length = 877
Score = 1091 bits (2821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/785 (63%), Positives = 630/785 (80%), Gaps = 17/785 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDG KEPVRFDKITAR+ +L YGL +H DPV V Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVVKRDGHKEPVRFDKITARISRLCYGLDSDHVDPVKVTQRIISGVYEGVTTEELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T FS+ + Y+Y N +GK ASLV+ D+
Sbjct: 61 AETAAYMTTIHPDYAVLAARLAVSNLHKQTTKLFSDVVDQFYHYINPDTGKPASLVSKDL 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++ +M + ++ AI YDRDF F+YFGFKTLERSYLL+M +V ERPQHM+MRVS+GIH
Sbjct: 121 FDNVMAHKDEINSAIFYDRDFQFNYFGFKTLERSYLLRMFGKVAERPQHMIMRVSLGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D SA+++Y+ MSQ +FTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 SDIKSAIESYNFMSQRYFTHASPTLFNAGTPKPQMSSCFLVAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG IHNIR++GSYI GTNG+SNGI+PM++VFN+TARYVDQGG KR GA AIY
Sbjct: 241 ISKTAGGIGCHIHNIRSTGSYIAGTNGTSNGIIPMIRVFNNTARYVDQGGNKRPGAIAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIF+F+D+RKN GKEE RARDLF ALWVPDLFM+RV ++G W+LF PSDA GL+
Sbjct: 301 LEPWHDDIFDFVDIRKNHGKEEIRARDLFPALWVPDLFMKRVEENGDWTLFSPSDAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D G EFE LY++Y EGR + I A+KLW+ IL +Q ETGTP++++KD+CN KSNQ+NL
Sbjct: 361 DVCGAEFEALYNKYVAEGRGRRTIKAQKLWYSILEAQTETGTPFIVYKDACNEKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+S+P+ETAVCNLAS+ALP ++ S D K +++
Sbjct: 421 GTIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTQIY 466
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FE+L E+ K++T NLN++ID N+YP+E R SN RHRPI +G+QGLADTF LL +PFES
Sbjct: 467 NFEKLHEIAKVMTRNLNRVIDRNYYPVEEARNSNFRHRPIALGVQGLADTFQLLRIPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+A++LN IFET+Y+ +L+AS ELA K+GPY+TY GSP+S+GILQ DMW + P+D WDW
Sbjct: 527 QKAKELNIHIFETLYHGSLEASCELAQKEGPYQTYEGSPVSQGILQYDMWGVNPTDLWDW 586
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+SL+ I ++GVRNSLL+APMPTASTSQILG NECFEP+TSN+Y RR LSGEF +VN +L
Sbjct: 587 TSLKAQIKEHGVRNSLLLAPMPTASTSQILGYNECFEPFTSNMYQRRTLSGEFQIVNPYL 646
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LGLW+ ++K +I NGS++ + +P+ELK IYKTVWEI QKT+++ AADR +
Sbjct: 647 LRDLVDLGLWNDSMKQHLITANGSIADLPNVPQELKDIYKTVWEISQKTIIEFAADRSAF 706
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN--- 777
IDQS SLNIH+ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V
Sbjct: 707 IDQSHSLNIHIRAPTFGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDAKVAEQAA 766
Query: 778 NEKAN 782
N KAN
Sbjct: 767 NAKAN 771
>gi|395802145|ref|ZP_10481398.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
sp. F52]
gi|395435386|gb|EJG01327.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
sp. F52]
Length = 797
Score = 1091 bits (2821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/822 (63%), Positives = 649/822 (78%), Gaps = 37/822 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDG +EPV FDKIT R+KKL YGL+ E DPV VA +V G+Y GV+T++LD LA
Sbjct: 1 MYVVKRDGHREPVMFDKITERIKKLCYGLN-ELVDPVKVAMRVIEGLYDGVSTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT+ HPDYA LA RVA+SNLH TK SFSET+KDMY+Y N R+G+ A L+ADDV
Sbjct: 60 AETAASMTIAHPDYAQLAARVAISNLHSNTKKSFSETMKDMYHYVNPRNGQDAPLIADDV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I +NAA LD IIY RDF++DYFGFKTLERSYLLK++ ++VERPQHMLMRVSVGIH
Sbjct: 120 YKVIQENAAFLDSHIIYTRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD S ++TY LMS+ +FTHATPTLFNAGTP+PQ+SSCFLL M++DSI+GIYDTLK+ A
Sbjct: 180 DDLKSVIETYDLMSKKFFTHATPTLFNAGTPKPQMSSCFLLAMQEDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+E WHADIF+FLDL+KN GKEE RARDLF+A+W DLFM+RV++DG W+L CP++ GL
Sbjct: 300 IETWHADIFDFLDLKKNHGKEEMRARDLFFAMWTSDLFMKRVQEDGPWTLMCPNECPGLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY+ YE +G+ + I AR+LW +IL SQIETGTPYML+KD+ NRKSN +NL
Sbjct: 360 DVYGDEFEALYTGYEAQGKGRKTIRARELWEKILESQIETGTPYMLYKDAANRKSNHKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+EF+S +E AVCNLASI+LP +V +N F
Sbjct: 420 GTIRSSNLCTEIMEFTSKDEIAVCNLASISLPMFV--------------------ENGEF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ E L VTK +T NLNK+ID N+YP++ SN+RHRP+G+G+QGLAD FI+L +PF S
Sbjct: 460 NHESLYNVTKRVTRNLNKVIDRNYYPVQEAENSNMRHRPVGLGVQGLADAFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA++LN++IFET+Y+ A+ AS E+A ++GPY T+ GSPMSKG Q +MW + S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEMAKEEGPYSTFEGSPMSKGEFQYNMWGLKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+SLR+ + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWASLRKEVMEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL +LGLW+ LK +I+ NGSV I+ IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVKLGLWNEDLKQEIMRHNGSVQNINIIPQDLKDLYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQSLN+ M+ ++ KLTS+HFYAW G+KTGMYYLRT+AA DAIKFT++ N
Sbjct: 700 GYFIDQSQSLNLFMQDANYSKLTSMHFYAWQSGLKTGMYYLRTKAAVDAIKFTLN----N 755
Query: 778 NEKANRADNDVEANLAQVVCSLK---------NQEECMACGS 810
++K A + V+ + V K + E+C CGS
Sbjct: 756 DKKQETAPSLVQKTESISVEDYKAMLLKAQAADPEDCEMCGS 797
>gi|298207003|ref|YP_003715182.1| ribonucleoside-diphosphate reductase large chain [Croceibacter
atlanticus HTCC2559]
gi|83849637|gb|EAP87505.1| probable ribonucleoside-diphosphate reductase large chain
[Croceibacter atlanticus HTCC2559]
Length = 840
Score = 1090 bits (2820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/815 (63%), Positives = 640/815 (78%), Gaps = 36/815 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+KRDGR+EPV FDKITAR+KKL YGL+ E DPV VA +V G+Y GVTT+ LD LA
Sbjct: 1 MDVLKRDGRREPVMFDKITARVKKLCYGLN-ELVDPVKVAMRVIEGLYDGVTTSDLDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MTV+HPDYA LA R++VSNLHK TK +FSE + D+Y Y N R+GKKA L++D+V
Sbjct: 60 AETAASMTVSHPDYAKLAARISVSNLHKDTKKTFSEVMTDLYEYVNPRTGKKAPLLSDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I N LD IIY+RD+ +DYFGFKTLERSYLLK++ ++ ERPQHMLMRVSVGIH
Sbjct: 120 YKVIQDNKDRLDSTIIYNRDYGYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD D+A++TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL M+DDSI+GIYDTLK+ A
Sbjct: 180 DDLDAAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPMLQV+NDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGIVPMLQVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FLDL+KN GKEE RARDLFYA+W+PDLFM+RV +DG W+L CP++ L
Sbjct: 300 IEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWIPDLFMKRVEEDGNWTLMCPNECPNLF 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ EF+ LY +YE E + + I AR LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 NVHSEEFDELYLKYESENKGRKTIKARVLWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLASIALP +V KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFV--------------------KNGAF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +TK +T+NLNK+ID N+YP++ SN RHRP+G+GIQGLAD FI+L +PF S
Sbjct: 460 DHKELFRITKRVTKNLNKVIDRNYYPVKEAENSNFRHRPVGLGIQGLADAFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA+ LN++IFET+Y+ A+ AS ELA+++GPY +Y GSP+SKG Q ++W I S R
Sbjct: 520 DEAKTLNQEIFETLYFAAVTASMELAIEEGPYSSYEGSPISKGEFQYNLWGIKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+ LR+ + +NGVRNSLLVAPMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWAGLRQKVLENGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL LGLW++ LK I+ NGS+ I IP++LK +YKTV+E+ K ++DM+ R
Sbjct: 640 KHLLEDLVNLGLWNNDLKNAIMRANGSIQNIDGIPQDLKELYKTVYELSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQSLN+ ME ++ KLTS+HFYAW G+KTGMYYLRT+AA DAIKFTV
Sbjct: 700 GYFIDQSQSLNLFMENANYAKLTSMHFYAWKNGLKTGMYYLRTKAAVDAIKFTV------ 753
Query: 778 NEKANRAD-----NDVEANLAQVVCSLKNQEECMA 807
EKA +A+ +V A A+ + K Q E A
Sbjct: 754 -EKAKKAEPQPQQQEVAAKAAETLQQAKTQLEPQA 787
>gi|156408425|ref|XP_001641857.1| predicted protein [Nematostella vectensis]
gi|156228997|gb|EDO49794.1| predicted protein [Nematostella vectensis]
Length = 810
Score = 1090 bits (2820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/819 (61%), Positives = 635/819 (77%), Gaps = 32/819 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV+KR+G E V DKIT+R+ KL YGL E P+ + KV +G+Y+GV TT+LD LA
Sbjct: 11 LYVLKRNGDSERVYLDKITSRISKLCYGLKNEFVKPINITMKVISGIYQGVKTTELDTLA 70
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT HPDYA+LA R+ VSNLHK TK FSE ++++YNY N ++ K + L++ +
Sbjct: 71 AETAASMTTKHPDYAILAARIEVSNLHKETKKVFSEVMEELYNYVNPKNNKHSPLISKET 130
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+II K+A L+ AIIYDRD+ ++YFGFKTL RSYLLK++ +V ERPQHMLMRVSVGIH
Sbjct: 131 LDIIQKHADRLNSAIIYDRDYQYNYFGFKTLMRSYLLKINGKVAERPQHMLMRVSVGIHG 190
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+LMS+ WFTHA+PTLFNAGT +PQ+SSCFLL M DDSIEGIY TL+ CA+
Sbjct: 191 EDIDAAIETYNLMSEKWFTHASPTLFNAGTNRPQMSSCFLLTMSDDSIEGIYGTLRTCAL 250
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+++H IRA+GSYI GTNG SNG+VPML+V++ TARYVDQGG KR GAFAIY
Sbjct: 251 ISKNAGGIGVNVHCIRAAGSYIAGTNGHSNGLVPMLRVYDSTARYVDQGGNKRPGAFAIY 310
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI EFLDL+KN GKEE RARDLFYALW+PDLFM+RV DG WSL CP+ GL
Sbjct: 311 LEPWHADILEFLDLKKNTGKEEQRARDLFYALWIPDLFMKRVEADGMWSLMCPNQCPGLQ 370
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G +FE LY +YE +G+ I A+KLWF IL SQ ETGTPYML+KD+CN KSNQ+NL
Sbjct: 371 DCYGEKFEKLYEKYESQGKYMRQIKAQKLWFAILESQTETGTPYMLYKDACNSKSNQKNL 430
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+S+P+E AVCNLASIAL R+V P + F
Sbjct: 431 GTIKCSNLCTEIVEYSAPDEVAVCNLASIALNRFVNVDKSPPE----------------F 474
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L EVT+++T+NLNKIIDVN+YP+ R+SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 475 NFQKLFEVTQVVTKNLNKIIDVNYYPVPEARKSNFRHRPIGIGVQGLADAFILMRYPFES 534
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+AQ+LNK IFETIYY A+ AS +LA +GPYETY GSP S+G+LQ D+WN+TPS+ WDW
Sbjct: 535 QKAQELNKLIFETIYYGAVTASCDLAATNGPYETYEGSPASQGLLQYDLWNVTPSNLWDW 594
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ + ++G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 595 EALKKKVKEHGLRNSLLIAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGEFQIVNHHL 654
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE+GLW+ +K ++I NGS+ I EIP +LKA+YKTVWEIKQ+ L+DMAADRG +
Sbjct: 655 LKDLTEMGLWNDGMKNQLIANNGSIQDIKEIPADLKALYKTVWEIKQRVLIDMAADRGAF 714
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL---- 776
IDQSQS N+ + QP KLTS+HFY W KG+KTGMYYLR+R A +AI+FTVD + L
Sbjct: 715 IDQSQSFNVFIAQPTFSKLTSMHFYGWKKGLKTGMYYLRSRPAVNAIQFTVDQTALAKKK 774
Query: 777 -------NNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
+NE+ + D D A C N + C+ C
Sbjct: 775 ASDSSPTSNEEKPKKDED-----AAAACRRDNPDGCLMC 808
>gi|343425606|emb|CBQ69140.1| probable RNR1-ribonucleoside-diphosphate reductase large subunit
[Sporisorium reilianum SRZ2]
Length = 897
Score = 1090 bits (2820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/781 (63%), Positives = 625/781 (80%), Gaps = 18/781 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV KRDGRKE V+FDK+TAR+ KL YGL + + DP+ + +KV G+Y+GVTT +LD LA
Sbjct: 2 IYVYKRDGRKEVVKFDKVTARISKLCYGLDQNYVDPIEITRKVIDGIYEGVTTVELDNLA 61
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA T HPDYA+LA R+A+SNLHK T+ +FS+ ++D+Y Y N ++G+ + +++D
Sbjct: 62 AETAAYKTTTHPDYAVLAARIAISNLHKETRKNFSQVVQDLYEYVNPKNGRHSPMISDTT 121
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+++M++ LD AIIY+RDF +++FGFKTLERSYLL+++ +V ERPQHMLMRV+VGIH
Sbjct: 122 YKVVMEHKDQLDSAIIYERDFHYNFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 181
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+LMSQ +FTHA+PTLFNAGTP PQLSSCFL+ MKDDSI+GIYDTLK CA+
Sbjct: 182 QDIDSAIETYNLMSQKYFTHASPTLFNAGTPHPQLSSCFLVTMKDDSIDGIYDTLKTCAM 241
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IR +GSYI GTNG SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 242 ISKTAGGIGLNIHCIRGTGSYIAGTNGVSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 301
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+D+FEFLDLRKN GKEE RAR+LFYALWVPDLFM+RV +G WSL CP++ GLA
Sbjct: 302 IEPWHSDVFEFLDLRKNHGKEEVRARELFYALWVPDLFMKRVEQNGDWSLMCPNECPGLA 361
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EGR K + A+KLW+ IL SQ ETG P++L+KD+ NRKSNQ+NL
Sbjct: 362 DCYGDEFERLYERYEAEGRFKRTVKAQKLWYAILESQTETGNPFILYKDAANRKSNQKNL 421
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI+E+S+P+E AVCNLASIALP ++ D + +
Sbjct: 422 GTIKCSNLCTEIIEYSAPDEVAVCNLASIALPTFI------------------DPVTKTY 463
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF+RL EV K I +NLNKIID+N+YP+E RRSN+RHRPIGIG+QGLAD F+++G FES
Sbjct: 464 DFKRLHEVAKAICKNLNKIIDINYYPVEEARRSNMRHRPIGIGVQGLADAFMIMGYAFES 523
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LN IFETIY+ AL+ S ELA + G YETY GSP S+G LQ DMW +TPSD WDW
Sbjct: 524 PEARRLNVQIFETIYHAALERSCELAQEHGTYETYAGSPASQGELQYDMWGVTPSDLWDW 583
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+ I+K+G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 584 AELKAKIAKHGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 643
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L++L E GLW+ +K +II GS+ + IPE +K +YKTVWEI QK ++DMAADRG +
Sbjct: 644 LRELVEQGLWNDTMKNRIIAHGGSIQNVPGIPERIKKLYKTVWEISQKAIIDMAADRGAF 703
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
I QSQSLNIH+ P G+LTS+HFY W KG+KTG YYLRT+ A++AI+FT+ + +N K
Sbjct: 704 ICQSQSLNIHLSAPTFGQLTSMHFYGWKKGLKTGTYYLRTKPASNAIQFTLSVAEVNEAK 763
Query: 781 A 781
A
Sbjct: 764 A 764
>gi|6320914|ref|NP_010993.1| ribonucleotide-diphosphate reductase subunit RNR1 [Saccharomyces
cerevisiae S288c]
gi|730514|sp|P21524.2|RIR1_YEAST RecName: Full=Ribonucleoside-diphosphate reductase large chain 1;
AltName: Full=Ribonucleotide reductase R1 subunit 1;
AltName: Full=Ribonucleotide reductase large subunit 1
gi|93278634|pdb|1ZYZ|A Chain A, Structures Of Yeast Ribonucloetide Reductase I
gi|93278635|pdb|1ZYZ|B Chain B, Structures Of Yeast Ribonucloetide Reductase I
gi|93278636|pdb|1ZZD|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279171|pdb|2CVS|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279172|pdb|2CVT|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279173|pdb|2CVU|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279174|pdb|2CVV|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279175|pdb|2CVW|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279176|pdb|2CVX|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279177|pdb|2CVY|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279277|pdb|2EUD|A Chain A, Structures Of Yeast Ribonucleotide Reductase I Complexed
With Ligands And Subunit Peptides
gi|197107210|pdb|2ZLF|A Chain A, The Structural Basis For Peptidomimetic Inhibition Of
Eukaryotic Ribonucleotide Reductase
gi|197107212|pdb|2ZLG|A Chain A, The Structual Basis For Peptidomimetic Inhibition Of
Eukaryotic Ribonucleotide Reductase
gi|290560304|pdb|3K8T|A Chain A, Structure Of Eukaryotic Rnr Large Subunit R1 Complexed
With Designed Adp Analog Compound
gi|323714514|pdb|3PAW|A Chain A, Low Resolution X-Ray Crystal Structure Of Yeast Rnr1p With
Datp Bound In The A-Site
gi|323714515|pdb|3PAW|B Chain B, Low Resolution X-Ray Crystal Structure Of Yeast Rnr1p With
Datp Bound In The A-Site
gi|323714516|pdb|3PAW|C Chain C, Low Resolution X-Ray Crystal Structure Of Yeast Rnr1p With
Datp Bound In The A-Site
gi|323714517|pdb|3PAW|D Chain D, Low Resolution X-Ray Crystal Structure Of Yeast Rnr1p With
Datp Bound In The A-Site
gi|383875418|pdb|3S87|A Chain A, Structure Of Yeast Ribonucleotide Reductase 1 With Dgtp
And Adp
gi|383875420|pdb|3S8B|A Chain A, Structure Of Yeast Ribonucleotide Reductase 1 With Amppnp
And Cdp
gi|414145322|pdb|3RSR|A Chain A, Crystal Structure Of 5-Nitp Inhibition Of Yeast
Ribonucleotide Reductase
gi|603306|gb|AAB64606.1| Rnr1p: Ribonucleotide reductase [Saccharomyces cerevisiae]
gi|256271462|gb|EEU06516.1| Rnr1p [Saccharomyces cerevisiae JAY291]
gi|285811701|tpg|DAA07729.1| TPA: ribonucleotide-diphosphate reductase subunit RNR1
[Saccharomyces cerevisiae S288c]
Length = 888
Score = 1090 bits (2819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/785 (62%), Positives = 632/785 (80%), Gaps = 15/785 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPV+FDKITAR+ +L YGL +H D V V Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ ++D+Y Y N +GK A +++DDV
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ +V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++AL+TY+LMS +FTHA+PTLFNAGTP+PQ+SSCFL+ MK+DSIEGIYDTLK+CA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV ++G W+LF P+ A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+EGR K I A+KLW+ IL +Q ETGTP++++KD+CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRGK-TIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+ETAVCNLAS+ALP ++ S D K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+ K++T NLN++ID N+YP+E R+SN+RHRPI +G+QGLADTF+LL LPF+S
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN IFETIY+ +++AS ELA KDGPYET+ GSP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K+GVRNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W +K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLN+ + P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D + +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKIADQAT 765
Query: 781 ANRAD 785
N AD
Sbjct: 766 ENVAD 770
>gi|366993995|ref|XP_003676762.1| hypothetical protein NCAS_0E03350 [Naumovozyma castellii CBS 4309]
gi|342302629|emb|CCC70405.1| hypothetical protein NCAS_0E03350 [Naumovozyma castellii CBS 4309]
Length = 908
Score = 1090 bits (2819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/785 (63%), Positives = 631/785 (80%), Gaps = 15/785 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPV+FDKITAR+ +L YGL D V V Q++ +GVY+GVTT++LD LA
Sbjct: 1 MYVIKRDGRKEPVKFDKITARISRLCYGLDPNRIDAVKVTQRIISGVYEGVTTSELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA+LA R+A+SNLHK T FS I+ +++Y N +GK A L++DDV
Sbjct: 61 AETCAYMTTVHPDYAVLAARLAISNLHKQTTKQFSTVIQQLHDYINPATGKHAPLISDDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+M+N ++ AI+YDRDF F+YFGFKTLERSYLL+++ +V ERPQH++MRVS+GIH
Sbjct: 121 YDIVMENKDEINSAIVYDRDFQFNYFGFKTLERSYLLRLNGKVAERPQHLIMRVSLGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +A++TY+LMS +F HA+PTLFNAGTP+PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 RDLKAAMETYNLMSLRYFIHASPTLFNAGTPKPQMSSCFLVAMKDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHN+R++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNVRSTGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+++RKN GKEE RARDLF ALWVPDLFM+RV+++G+W+LF PS A GL+
Sbjct: 301 LEPWHADIFDFIEIRKNHGKEEIRARDLFPALWVPDLFMKRVQENGQWTLFSPSSAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE EGR K I A+KLW+ IL +Q ETGTP++++KD+CN KSNQ+NL
Sbjct: 361 DCYGEEFEALYTRYEREGRGK-TIKAQKLWYSILEAQTETGTPFIIYKDACNEKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+ETAVCNLAS+ALP ++ S D K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+ K+IT NLNK+ID N+YP+ R SN+RHRPI +G+QGLADT++LL LPFES
Sbjct: 466 NFKKLHEIAKVITRNLNKVIDRNYYPVPEARNSNMRHRPIALGVQGLADTYMLLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN IFETIY+ +L+AS ELA KDGPY+++ GSP SKGILQ+DMW+ P WDW
Sbjct: 526 EEAKLLNIQIFETIYHASLEASCELAQKDGPYQSFEGSPSSKGILQMDMWDKKPYGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K G RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKYGTRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W +K II ENGS+ + +P+ELKA+YKT+WEI QKT++DMAADR Y
Sbjct: 646 LRDLVDLGIWDEGMKQHIITENGSIQNLPNVPDELKALYKTIWEISQKTIIDMAADRSIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLN+ + P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D + +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKIADQAA 765
Query: 781 ANRAD 785
AN AD
Sbjct: 766 ANIAD 770
>gi|410972848|ref|XP_003992868.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase large subunit [Felis catus]
Length = 790
Score = 1090 bits (2819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/811 (64%), Positives = 645/811 (79%), Gaps = 22/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIH+
Sbjct: 121 LDIVXANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHE 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNA QP S+CFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAELFQP--SNCFLLSMKDDSIEGIYDTLKQCAL 238
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 239 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 298
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 299 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 358
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 359 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 418
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 419 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK+I NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 460 DFKKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+ P+D WDW
Sbjct: 520 PEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVIPTDLWDW 579
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 580 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 639
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 640 LKDLTERGLWNEEMKNQIIACNGSIQNIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 700 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 759
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N+EEC+ CGS
Sbjct: 760 KATKEEEEKERNTAAMVCSLENREECLMCGS 790
>gi|449301212|gb|EMC97223.1| hypothetical protein BAUCODRAFT_138578 [Baudoinia compniacensis
UAMH 10762]
Length = 920
Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/776 (64%), Positives = 623/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKE V+FDKITAR+ +L YGL EH DP + KV +GVY+GVTT QLD+LA
Sbjct: 2 MYVFKRDGRKERVQFDKITARVSRLCYGLDPEHVDPAAITMKVISGVYQGVTTVQLDDLA 61
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK TK +S I D+Y+Y N +S K A +++++
Sbjct: 62 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKLWSSVISDLYHYVNPKSKKPAPMISEET 121
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y +MK+A L+ AI+YDRDF++ YFGFKTLERSYLL++D +V ERPQHM+MRV+VGIH
Sbjct: 122 YNTVMKHADELNSAIVYDRDFNYQYFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHG 181
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A++TY+LMS +FTHA+PTLF AGTPQ QL+SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 182 EDIEAAIETYNLMSNKYFTHASPTLFMAGTPQAQLASCFLIDMKEDSIEGIYDTLKTCAM 241
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 242 ISKSAGGIGLNVHRIRATGSYIGGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 301
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F FLDLRKN GKEE RARDLFYALW+PDLFM+RV +G W+L CP++ GLA
Sbjct: 302 LEPWHADVFSFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVESNGNWTLMCPNECPGLA 361
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY QYE EGR + I A+KLW+ IL +Q ETG P+M +KD+ NRKSNQ+NL
Sbjct: 362 DVYGDEFEALYEQYEREGRGRETIRAQKLWYAILEAQTETGNPFMCYKDAANRKSNQKNL 421
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+ +P+E AVCNLAS+ALP YV D +N ++
Sbjct: 422 GTIRSSNLCTEIMEYCAPDEVAVCNLASLALPTYV------------------DIQNEVY 463
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EV K++T+NLNKII++N+YP+ R+SN RHRPIG+G+ GLAD F+ L +PF+S
Sbjct: 464 DFQKLHEVVKVVTKNLNKIINLNYYPVPEARKSNFRHRPIGLGVSGLADAFLALRMPFDS 523
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN IFETIY+ AL++S E+A + GPYETY GSP+SKG LQ DMWN P+D WDW
Sbjct: 524 DEAKLLNIQIFETIYHAALESSCEIAAELGPYETYEGSPVSKGELQYDMWNKEPTDLWDW 583
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+SL+ I+++GVRNSLLVAPMPTASTSQI+G NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 584 TSLKAKIAQHGVRNSLLVAPMPTASTSQIMGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 643
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL + GLWS +K +II + GS+ I IP+ELKA+YKTVWEI Q+ +V MAADRG +
Sbjct: 644 LKDLVDRGLWSDNMKNRIIADGGSIQNIPNIPDELKALYKTVWEISQRHIVQMAADRGAF 703
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIHM++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 704 IDQSQSLNIHMKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEKL 759
>gi|156043867|ref|XP_001588490.1| ribonucleotide reductase large subunit [Sclerotinia sclerotiorum
1980]
gi|154695324|gb|EDN95062.1| ribonucleotide reductase large subunit [Sclerotinia sclerotiorum
1980 UF-70]
Length = 910
Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/776 (64%), Positives = 621/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKE V+FDKITAR+ +L Y L +H D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKERVQFDKITARVSRLCYALDPDHIDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I+D+Y Y N ++GK + +++ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSHVIRDLYQYTNPKNGKASPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+E +M++ L+ AI+YDRDF++ YFGFKTLERSYLL++D +V ERPQ M+MRV+VGIH
Sbjct: 121 FECVMRHEEELNSAIVYDRDFNYQYFGFKTLERSYLLRLDGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA++TY+LMS +FTHA+PTLF+AGTPQ QLSSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 DDIESAIETYNLMSNKYFTHASPTLFSAGTPQAQLSSCFLIDMKEDSIDGIYDTLKICAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IRA+G+YI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKNAGGIGLNIHRIRATGAYIAGTNGNSNGIVPMLRVFNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLFYALW+PDLFM+RV +G+W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY YE+ G+ + I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGEEFEALYESYEKAGKGRKTIKAQKLWYSILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+S+P+E A CNLASIALP +V + +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVACCNLASIALPTFV------------------NMNEGTY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EV +++ NLNKIID+N+YP++ RRSN RHRPI +G+QGLAD F+ L LPF+S
Sbjct: 463 DFQKLHEVVQVVVRNLNKIIDINYYPVQEARRSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+ LN IFETIY+ AL +S E+A + GPYETY GSP+SKG LQ DMW +TPSD WDW
Sbjct: 523 PEAKHLNIQIFETIYHAALTSSVEIAKELGPYETYQGSPVSKGELQYDMWGVTPSDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I ++G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DSLKQSIKQHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II + GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQS+NIHM+ P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSMNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEAL 758
>gi|151944785|gb|EDN63044.1| ribonucleotide reductase, large (R1) subunit [Saccharomyces
cerevisiae YJM789]
gi|190405633|gb|EDV08900.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a]
gi|259145984|emb|CAY79244.1| Rnr1p [Saccharomyces cerevisiae EC1118]
gi|323333854|gb|EGA75244.1| Rnr1p [Saccharomyces cerevisiae AWRI796]
gi|323348888|gb|EGA83125.1| Rnr1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355271|gb|EGA87096.1| Rnr1p [Saccharomyces cerevisiae VL3]
gi|392299768|gb|EIW10860.1| Rnr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 888
Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/785 (62%), Positives = 632/785 (80%), Gaps = 15/785 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPV+FDKITAR+ +L YGL +H D V V Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ ++D+Y Y N +GK A +++DDV
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ +V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++AL+TY+LMS +FTHA+PTLFNAGTP+PQ+SSCFL+ MK+DSIEGIYDTLK+CA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV ++G W+LF P+ A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+EGR K I A+KLW+ IL +Q ETGTP++++KD+CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRGK-TIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+ETAVCNLAS+ALP ++ S D K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+ K++T NLN++ID N+YP+E R+SN+RHRPI +G+QGLADTF+LL LPF+S
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN IFETIY+ +++AS ELA KDGPYET+ GSP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGIRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W +K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLN+ + P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D + +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKIADQAT 765
Query: 781 ANRAD 785
N AD
Sbjct: 766 ENVAD 770
>gi|255710753|ref|XP_002551660.1| KLTH0A04686p [Lachancea thermotolerans]
gi|238933037|emb|CAR21218.1| KLTH0A04686p [Lachancea thermotolerans CBS 6340]
Length = 879
Score = 1089 bits (2817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/785 (61%), Positives = 636/785 (81%), Gaps = 14/785 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+EPV+FDKITAR+ +L YGL H D V + Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRREPVKFDKITARVSRLCYGLDPNHVDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ + D+++Y N ++G + +++ +V
Sbjct: 61 AETCAYMTTIHPDYATLAARIAISNLHKQTTKQFSQVVSDLFHYVNPKNGIHSPMISQEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++II K+ L+ AI+YDRDF ++YFGFKTLERSYLL+++ V ERPQH++MRV+VGIH
Sbjct: 121 FDIIQKHKDELNSAIVYDRDFQYNYFGFKTLERSYLLRINGEVAERPQHLIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ ++TY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 DNIPKVIETYNLMSLKYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIF+F+D+RKN GKEE RARDLF ALWVPDLFM+RV+++G W+LF PS+A GL+
Sbjct: 301 LEPWHSDIFDFVDIRKNHGKEEIRARDLFPALWVPDLFMKRVQENGDWTLFSPSEAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +Y +EGR + I A+KLW+ IL +Q ETGTP+ML+KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYERYVQEGRGRKTIKAQKLWYAILEAQTETGTPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+ETAVCNLAS++LP ++ S D + + +
Sbjct: 421 GVIKSSNLCCEIVEYSAPDETAVCNLASLSLPAFIET--------------SEDGQTQWY 466
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+ K++T NLN++ID N+YP+E+ R SN+RHRP+ +G+QGLAD F++L +PF+S
Sbjct: 467 NFDKLHEIAKVVTHNLNQVIDRNYYPVESARNSNMRHRPVALGVQGLADAFMILRIPFDS 526
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ AL+ S ELAV+ GPYET+ GSP S+GILQ DMW+ P+D WDW
Sbjct: 527 QEAKELNIQIFETIYHAALERSNELAVEHGPYETFEGSPASQGILQFDMWDKKPTDLWDW 586
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+ I K G+RNSLL+APMPTASTSQILGNNECFEPYTSN+Y+RRVLSGEF +VN +L
Sbjct: 587 ETLKAKIVKTGLRNSLLLAPMPTASTSQILGNNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W+ A+K+ II +NGS+ + IP++LK +YKTVWE+ QKT+++MAADR CY
Sbjct: 647 LRDLVDLGIWNDAMKSHIISDNGSIQNLPNIPQKLKDLYKTVWELSQKTIIEMAADRACY 706
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLN+H+ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D SV +
Sbjct: 707 IDQSQSLNVHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKSVASMAG 766
Query: 781 ANRAD 785
AD
Sbjct: 767 DKEAD 771
>gi|349577734|dbj|GAA22902.1| K7_Rnr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 888
Score = 1089 bits (2817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/785 (62%), Positives = 632/785 (80%), Gaps = 15/785 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPV+FDKITAR+ +L YGL +H D V V Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ ++D+Y Y N +GK A +++DDV
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ +V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++AL+TY+LMS +FTHA+PTLFNAGTP+PQ+SSCFL+ MK+DSIEGIYDTLK+CA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV ++G W+LF P+ A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+EGR K I A+KLW+ IL +Q ETGTP++++KD+CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRGK-TIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+ETAVCNLAS+ALP ++ S D K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+ K++T NLN++ID N+YP+E R+SN+RHRPI +G+QGLADTF+LL LPF+S
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN IFETIY+ +++AS ELA KDGPYET+ GSP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGIRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W +K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLN+ + P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D + +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKIADQAT 765
Query: 781 ANRAD 785
N AD
Sbjct: 766 ENVAD 770
>gi|401626001|gb|EJS43969.1| rnr1p [Saccharomyces arboricola H-6]
Length = 887
Score = 1089 bits (2817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/785 (63%), Positives = 629/785 (80%), Gaps = 15/785 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPV+FDKITAR+ +L YGL +H D V V Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHVDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ I D+Y Y N +GK A +++DDV
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIDDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ +V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++AL+TY+LMS +FTHA+PTLFNAGTP+PQ+SSCFL+ MK+DSIEGIYDTLK+CA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALWVPDLFM+RV ++G W+LF P+ A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWVPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+EGR K I A+KLW+ IL +Q ETGTP++++KD+CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRGK-TIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+ETAVCNLAS+ALP ++ S D K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+ K++T NLNK+ID N+YP+E R+SN+RHRPI +G+QGLADTF+LL LPF+S
Sbjct: 466 NFKKLHEIAKVVTRNLNKVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN IFETIY+ + +AS ELA KDGPYET+ GSP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNVQIFETIYHASTEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR + K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 DTLRSDVMKHGIRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W +K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 646 LRDLVDLGIWDDGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLN+ + P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKVADQAT 765
Query: 781 ANRAD 785
N AD
Sbjct: 766 ENVAD 770
>gi|393186080|gb|AFN02837.1| putative ribonucleotide-diphosphate reductase large chain
[Phakopsora pachyrhizi]
Length = 865
Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/774 (63%), Positives = 626/774 (80%), Gaps = 20/774 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
+V KRDGR+E V FDKITAR+ KL YGL H +P+ + +KV GV+ GVTT +LD LAA
Sbjct: 3 FVYKRDGRRERVAFDKITARINKLCYGLDNVHVEPIEITKKVINGVFNGVTTVELDNLAA 62
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA MT HPDYA+LA R+A+SNLHK TK FS+ I+D+YNY N +G+ +S+++ Y
Sbjct: 63 ETAAYMTTRHPDYAVLAARIAISNLHKETKKIFSQVIEDLYNYVNPINGRPSSMISQTTY 122
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
E + NA L+ A+IYDRDF+++YFGFKTLERSYLL+++ +V ERPQHMLMRV+VGIH
Sbjct: 123 EAVKANAEALNSAVIYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHGT 182
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D + A++TY+LMS+ +FTHA+PTLFN+GTP PQ+SSCFL+ M DSI+GIYDTLK CA+I
Sbjct: 183 DVERAIRTYNLMSEKYFTHASPTLFNSGTPHPQMSSCFLVSMTSDSIDGIYDTLKTCAMI 242
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKSAGGIGL++H+IRA+GSYI GTNG SNGIVPML+VFN+TARYVDQGG KR GAFAIYL
Sbjct: 243 SKSAGGIGLNVHDIRATGSYIAGTNGYSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+F++LDLRKN GKEE RARDLFYALW+PD+FM RV +G W L CP++A GL+D
Sbjct: 303 EPWHADVFDWLDLRKNHGKEESRARDLFYALWIPDMFMRRVEQNGDWPLLCPAEAPGLSD 362
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
+G EF+ L+ +YE EGRAK VI A+KLW+ IL +Q ETG P+ML+KD+ N+KSNQ+NLG
Sbjct: 363 VYGEEFDELFLRYEREGRAKKVIKAQKLWYAILEAQTETGNPFMLYKDAANKKSNQKNLG 422
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+E+S+P+E AVCNLASIALP Y+ + GV +D
Sbjct: 423 TIKSSNLCTEIIEYSAPDEVAVCNLASIALPTYIND-GV-------------------YD 462
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L EV K +T NLNKIID+N+YP+ R+SN+RHRPIGIG+QGLAD F +L LPF+S
Sbjct: 463 FKKLHEVVKEVTYNLNKIIDINYYPVPEARKSNMRHRPIGIGVQGLADAFQILKLPFDSD 522
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
+A++LN IFET+Y+ AL+AS ELA+K+G YET+ GSP S G Q D+W +TP+D W+W
Sbjct: 523 KAKKLNIQIFETLYHAALEASHELALKEGHYETFPGSPASNGEFQYDLWGVTPTDLWEWG 582
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
+L+E + K+G+RNSLL+APMPTASTSQILG NECFEPYTSNIYTRRVL+GEF +VN LL
Sbjct: 583 TLKEKVKKDGIRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQIVNPWLL 642
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
K+L E+GLW+ +K +II GS+ I IP ++KA+YKTVWEI QK+++DM+ADRG +I
Sbjct: 643 KELVEMGLWNDEMKNRIIAHQGSIQNIPNIPSQMKAVYKTVWEISQKSIIDMSADRGAFI 702
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
DQSQSLNIH++ P G+LTS+HFYAW KG+KTGMYYLRTRAAA+AI+FTVD +
Sbjct: 703 DQSQSLNIHLQAPTFGQLTSMHFYAWKKGLKTGMYYLRTRAAANAIQFTVDKKI 756
>gi|393186086|gb|AFN02840.1| putative ribonucleoside-diphosphate reductase large chain
[Phakopsora pachyrhizi]
Length = 865
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/774 (63%), Positives = 626/774 (80%), Gaps = 20/774 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
+V KRDGR+E V FDKITAR+ KL YGL H +P+ + +KV GV+ GVTT +LD LAA
Sbjct: 3 FVYKRDGRRERVAFDKITARINKLCYGLDNVHVEPIEITKKVINGVFNGVTTVELDNLAA 62
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA MT HPDYA+LA R+A+SNLHK TK FS+ I+D+YNY N +G+ +S+++ Y
Sbjct: 63 ETAAYMTTRHPDYAVLAARIAISNLHKETKKIFSQVIEDLYNYVNPINGRPSSMISQTTY 122
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
E + NA L+ A+IYDRDF+++YFGFKTLERSYLL+++ +V ERPQHMLMRV+VGIH
Sbjct: 123 EAVKANAEALNSAVIYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHGT 182
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D + A++TY+LMS+ +FTHA+PTLFN+GTP PQ+SSCFL+ M DSI+GIYDTLK CA+I
Sbjct: 183 DVERAIRTYNLMSEKYFTHASPTLFNSGTPHPQMSSCFLVSMTSDSIDGIYDTLKTCAMI 242
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKSAGGIGL++H+IRA+GSYI GTNG SNGIVPML+VFN+TARYVDQGG KR GAFAIYL
Sbjct: 243 SKSAGGIGLNVHDIRATGSYIAGTNGYSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+F++LDLRKN GKEE RARDLFYALW+PD+FM RV +G W L CP++A GL+D
Sbjct: 303 EPWHADVFDWLDLRKNHGKEESRARDLFYALWIPDMFMRRVEQNGDWPLLCPAEAPGLSD 362
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
+G EF+ L+ +YE EGRAK VI A+KLW+ IL +Q ETG P+ML+KD+ N+KSNQ+NLG
Sbjct: 363 VYGEEFDELFLRYEREGRAKKVIKAQKLWYAILEAQTETGNPFMLYKDAANKKSNQKNLG 422
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+E+S+P+E AVCNLASIALP Y+ + GV +D
Sbjct: 423 TIKSSNLCTEIIEYSAPDEVAVCNLASIALPTYIND-GV-------------------YD 462
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L EV K +T NLNKIID+N+YP+ R+SN+RHRPIGIG+QGLAD F +L LPF+S
Sbjct: 463 FKKLHEVVKEVTYNLNKIIDINYYPVPEARKSNMRHRPIGIGVQGLADAFQILKLPFDSD 522
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
+A++LN IFET+Y+ AL+AS ELA+K+G YET+ GSP S G Q D+W +TP+D W+W
Sbjct: 523 KAKKLNIQIFETLYHAALEASHELALKEGHYETFPGSPASNGEFQYDLWGVTPTDLWEWG 582
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
+L+E + K+G+RNSLL+APMPTASTSQILG NECFEPYTSNIYTRRVL+GEF +VN LL
Sbjct: 583 TLKEKVKKDGIRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQIVNPWLL 642
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
K+L E+GLW+ +K +II GS+ I IP ++KA+YKTVWEI QK+++DM+ADRG +I
Sbjct: 643 KELVEMGLWNDEMKNRIIAHQGSIQNIPNIPSQMKAVYKTVWEISQKSIIDMSADRGAFI 702
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
DQSQSLNIH++ P G+LTS+HFYAW KG+KTGMYYLRTRAAA+AI+FTVD +
Sbjct: 703 DQSQSLNIHLQAPTFGQLTSMHFYAWKKGLKTGMYYLRTRAAANAIQFTVDKKI 756
>gi|393213404|gb|EJC98900.1| hypothetical protein FOMMEDRAFT_128598 [Fomitiporia mediterranea
MF3/22]
Length = 868
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/771 (64%), Positives = 618/771 (80%), Gaps = 20/771 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV KR RKE V FDKITAR+ KL +GL +H DP+ + +KV AGVY+GVTT +LD LAA
Sbjct: 3 YVYKRGERKERVAFDKITARIGKLCFGLDPKHVDPIEITKKVVAGVYQGVTTVELDNLAA 62
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA +T HPDYA+LA R+A+SNLHK TK FS I D+YNY N R+G+ A +++ + Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAISNLHKETKKKFSAVISDLYNYVNPRNGRPAGMISKETY 122
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
E + NA LD AI+Y+RDF + YFGFKTLERSYLLK++ ++ ERPQHMLMRV+VGIH
Sbjct: 123 ETVRDNAELLDSAIVYERDFHYQYFGFKTLERSYLLKINGKIAERPQHMLMRVAVGIHGR 182
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D + +++Y+LMSQ +FTHA+PTLFNAGTP PQLSSCFL+ MK+DSI+GIYDTLK+CA+I
Sbjct: 183 DIERTIESYNLMSQRYFTHASPTLFNAGTPHPQLSSCFLVTMKEDSIDGIYDTLKQCAMI 242
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK+AGGIGL+IH IRA+GSYI GTNG SNGIVPML+ F+ TARYVDQGG KR GAFAIY+
Sbjct: 243 SKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRAFDATARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+FEFLDLRKN GKEE RARDLFYALW+PDLFM+RV D W LFCP++A GL +
Sbjct: 303 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVESDSDWPLFCPNEAPGLHE 362
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EFE L+ +YE EGRAK + A+KLW+ I+ +Q+ETG P+ML+KDS NRKSNQQNLG
Sbjct: 363 VWGDEFEALFEKYENEGRAKRTVKAQKLWYAIIEAQVETGGPFMLYKDSANRKSNQQNLG 422
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+E+SSP+ETAVCNLASIALP ++R GS +D
Sbjct: 423 TIKSSNLCTEIIEYSSPDETAVCNLASIALPSFIR--------------GS------TYD 462
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L +V K++ NLN+IIDVN+YP++ R SN+RHRPIGIG+QGLADTF+ L LPF+SP
Sbjct: 463 FQKLHDVAKVVAFNLNRIIDVNYYPVQEARNSNMRHRPIGIGVQGLADTFMALRLPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA++LN IFETIY+ AL++S+++A DGPY ++ GSP +G LQ D+W + PSD WDW
Sbjct: 523 EARELNVKIFETIYHAALESSSDIAAVDGPYSSWKGSPAEQGKLQFDLWGVEPSDLWDWK 582
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
SL+E I++ G+RNSLL++PMPTASTSQILG NECFEPYTSNIYTRRVLSGEF VV LL
Sbjct: 583 SLKEKIAQTGLRNSLLLSPMPTASTSQILGFNECFEPYTSNIYTRRVLSGEFQVVCPWLL 642
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
++L E GLW ++ II NGSV I IP+++KAIYKTVWE+ QK ++DMAADRG +I
Sbjct: 643 RELVERGLWDEQMRNLIIAHNGSVQNIPSIPDDVKAIYKTVWELSQKKIIDMAADRGAFI 702
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
QSQSLNIH++ P +G++TS+HFY W KG+KTGMYYLRTR AA AI+FTVD
Sbjct: 703 CQSQSLNIHLQSPTNGQMTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVD 753
>gi|194859786|ref|XP_001969450.1| GG23946 [Drosophila erecta]
gi|190661317|gb|EDV58509.1| GG23946 [Drosophila erecta]
Length = 812
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/820 (61%), Positives = 640/820 (78%), Gaps = 29/820 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YVIKRDGR+E V FDKIT+R++KL Y L+ + DPV + +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA +T HPDYA+LA R+AVSNLHK TK +FS+ +D+YN+ NK + +K SLV++
Sbjct: 72 AEIAAGLTCYHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVSLVSEFH 131
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y ++ KNA L+ +IIYDRDF ++YFGFKTLERSYLLK + ++ ERPQHMLMRV++GIH
Sbjct: 132 YNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKTNGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ +FTHA+PTLF A T +PQLSSCFLL M DSIEGI+ ++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA G+ I GTNG+SNG+VPML+VFN+ ARYVDQGGGKR GAFAIY
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+FEFL+L+KN GKEE RARDLFYALW+PDLFM+RV +G WSL CP GL
Sbjct: 312 LEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLQ 371
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY +YE+EGRA + A+ LW+ I+ +Q+ETG PYMLFKD+CNRKSNQQN+
Sbjct: 372 DVWGDEFEKLYEKYEQEGRANRTVKAQSLWYAIIEAQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+S+P+E AVCNLASIAL +V + + +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTKI+T NLNKIID+N+YP+ R+SNLRHRP+GIGIQG AD IL+ P+ES
Sbjct: 473 DFKKLKEVTKIVTRNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMRFPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA LN+ IFETIYY AL+AS ELA +GPYETY GSP+SKGILQ DMW+ P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPTNLWDW 592
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I K+GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIYTRRVLSGEF VVN HL
Sbjct: 593 QKLKESIKKHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLTEL LW +K +II GS+ I IP+ ++ +YKTVWEI K+ + MAADRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIEAIPQRVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD-------- 772
IDQSQS NIH+ +P++GKLTS+HFY+W G+KTGMYYLRT+ AA+AI+FTV+
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKKGAEGI 772
Query: 773 --TSVLNNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ ++E + + + D E +A +VCSL+N++ CM+CGS
Sbjct: 773 NGQNGTSDESSKQFEEDRERKMADMVCSLENKDACMSCGS 812
>gi|323305248|gb|EGA58995.1| Rnr1p [Saccharomyces cerevisiae FostersB]
Length = 888
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/785 (62%), Positives = 631/785 (80%), Gaps = 15/785 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPV+FDKITAR+ +L YGL +H D V V Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ ++D+Y Y N +GK A +++DDV
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ +V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++AL+TY+LMS +FTHA+PTLFNAGTP+PQ+SSCFL+ MK+DSIEGIYDTLK+CA+
Sbjct: 181 XDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV ++G W+LF P+ A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+EGR K I A+KLW+ IL +Q ETGTP++++KD+CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRGK-TIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+ETAVCNLAS+ALP ++ S D K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+ K++T NLN++ID N+YP+E R+SN+RHRPI +G+QGLADTF+LL LPF+S
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN IFETIY +++AS ELA KDGPYET+ GSP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNIQIFETIYXASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGIRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W +K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLN+ + P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D + +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKIADQAT 765
Query: 781 ANRAD 785
N AD
Sbjct: 766 ENVAD 770
>gi|370988472|dbj|BAL43552.1| ribonucleotide reductase M1 [Xenopus laevis]
Length = 797
Score = 1088 bits (2814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/816 (63%), Positives = 648/816 (79%), Gaps = 25/816 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ E DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNLEFVDPAQITMKVIQGLYSGVTTIELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA RVAVSNLHK TK +FS+ ++D+YNY N + K + +V+ +
Sbjct: 61 AETAATLTTKHPDYAILAARVAVSNLHKETKKTFSDVMEDLYNYVNPLNSKHSPMVSKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ +IIYDRDF +++FGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSSIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLLCMKDDSIEGIYDTLK+CA+
Sbjct: 181 TDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+F+FLDL+KN GKEE RARDLFYA+W+PDLFM+RV ++ WSL CP + GL
Sbjct: 301 LEPWHYDVFDFLDLKKNTGKEEQRARDLFYAMWIPDLFMKRVENNLDWSLMCPHECPGLE 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG +FE LY +YE EGR + V+ A+++W I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGDKFEELYEKYEREGRTRKVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SN CTEIVE++S +E AVCNLAS+AL YV + R F
Sbjct: 421 GTIKCSNQCTEIVEYTSDKEVAVCNLASLALNMYV-------------------TPERSF 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LA+VTK+I NLNKII++N YP+ SN +HRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLADVTKVIVRNLNKIIEINFYPVPEAEYSNKKHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+AQ LNK IFETIYY AL++S ELA + GPYETY G P+SKGILQ DMWN+TP+D WDW
Sbjct: 522 EKAQMLNKQIFETIYYAALESSCELAKELGPYETYEGCPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 TALKEKIAKYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+KDLTE GLW+ +K +II NGS+ + +IP +LK +YKTVWEI QKT++ MAADRG +
Sbjct: 642 MKDLTEQGLWNEEMKNQIIANNGSIQNVPDIPADLKELYKTVWEISQKTVITMAADRGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L ++
Sbjct: 702 IDQSQSLNIHVAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKEKE 761
Query: 781 ------ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ + E N A +VCSL+N++EC+ CGS
Sbjct: 762 LITMETTEKDKEEKEKNKAAMVCSLENRDECLMCGS 797
>gi|195578133|ref|XP_002078920.1| GD22272 [Drosophila simulans]
gi|194190929|gb|EDX04505.1| GD22272 [Drosophila simulans]
Length = 812
Score = 1088 bits (2814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/820 (61%), Positives = 640/820 (78%), Gaps = 29/820 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YVIKRDGR+E V FDKIT+R++KL Y L+ + DPV + +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA +T NHPDYA+LA R+AVSNLHK TK +FS+ +D+YN+ NK + +K LV++
Sbjct: 72 AEIAAGLTCNHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLVSEFH 131
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y ++ KNA L+ +IIYDRDF ++YFGFKTLERSYLLK + ++ ERPQHMLMRV++GIH
Sbjct: 132 YNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ +FTHA+PTLF A T +PQLSSCFLL M DSIEGI+ ++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA G+ I GTNG+SNG+VPML+VFN+ ARYVDQGGGKR GAFAIY
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+FEFL+L+KN GKEE RARDLFYALW+PDLFM+RV +G WSL CP GL
Sbjct: 312 LEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLH 371
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY +YE+EGRA + A+ LWF I+ +Q+ETG PYMLFKD+CNRKSNQQN+
Sbjct: 372 EVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+SSP+E AVCNLASIAL +V + + +
Sbjct: 432 GTIKCSNLCTEIVEYSSPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTKI+T+NLNKIID+N+YP+ R+SNLRHRP+GIGIQG AD IL+ P+ES
Sbjct: 473 DFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMRFPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA LN+ IFETIYY AL+AS ELA +GPYETY GSP+SKGILQ DMW+ P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPTNLWDW 592
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I K+GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIYTRRVLSGEF VVN HL
Sbjct: 593 QKLKESIKKHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLTEL LW +K +II GS+ I IP++++ +YKTVWEI K+ + MAADRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIETIPQKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS----VL 776
IDQSQS NIH+ +P++GKLTS+HFY+W G+KTGMYYLRT+ AA+AI+FTV+ +
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKQGAVSM 772
Query: 777 NNEKA------NRADNDVEANLAQVVCSLKNQEECMACGS 810
N + + + D E +A +VCSL+N++ CM+CGS
Sbjct: 773 NGQNGTAEGSPQKYEEDRERKMADMVCSLENKDACMSCGS 812
>gi|440804772|gb|ELR25641.1| ribonucleosidediphosphate reductase, alpha subunit [Acanthamoeba
castellanii str. Neff]
Length = 825
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/775 (64%), Positives = 625/775 (80%), Gaps = 24/775 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLK---KLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLD 57
MYVIKRDG E V FDKIT RL+ +L L+ + DPVLV QKV GVY GV T QLD
Sbjct: 1 MYVIKRDGNPERVSFDKITRRLQVLCQLEPALASD-VDPVLVTQKVVQGVYNGVHTAQLD 59
Query: 58 ELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVA 117
LAAETAA M +P Y +LA R+A+SNL K T S ET + ++ Y N ++G ++L+A
Sbjct: 60 HLAAETAAYMGSLNPGYNVLAARIAISNLQKDTSESLLETARTLHTYVNSKTGLNSALIA 119
Query: 118 DDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
DDV+E+I N L+ AI Y+RDF++ YFGFKTLERSYL ++D ++VERPQHMLMRV+VG
Sbjct: 120 DDVFEVIANNTEALEAAIKYERDFNYTYFGFKTLERSYLFRVDGKIVERPQHMLMRVAVG 179
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
+HKD+ + ++TY L+SQ FTHATPTLFNAGTP+PQLSSCFLL MK+DSIEGIYDTLK+
Sbjct: 180 LHKDNIPAVIETYDLLSQQLFTHATPTLFNAGTPRPQLSSCFLLTMKEDSIEGIYDTLKQ 239
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIGL+ H IRAS SYI GTNG+SNG++PML+V+NDTARYVDQGGGKRKGAF
Sbjct: 240 CALISKSAGGIGLAAHRIRASNSYIRGTNGTSNGLIPMLRVYNDTARYVDQGGGKRKGAF 299
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
AIYLEPWHADIF+FLDL+KN GKEE RARDLFY LW+PDLFM+RV G WSLFCP++A
Sbjct: 300 AIYLEPWHADIFDFLDLKKNHGKEENRARDLFYGLWIPDLFMKRVETGGDWSLFCPNEAP 359
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
GL DSWG EFE Y +YE+EGRA+ V+ A++LWF IL SQIETGTPYML+KD+CN KSNQ
Sbjct: 360 GLFDSWGKEFEEKYERYEQEGRARRVVKAQELWFAILESQIETGTPYMLYKDACNGKSNQ 419
Query: 418 QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKN 477
Q+LGTI+SSNLCTE+V+++SP+E AVCNLAS+ALP+++ N
Sbjct: 420 QHLGTIQSSNLCTEVVQYTSPDEVAVCNLASLALPKFI--------------------TN 459
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
FD ++L +V K++T+NLNK+ID+N+YP+ R SN+RHRPIGIG+QGLAD F+++ P
Sbjct: 460 GEFDHKKLHDVVKVVTKNLNKVIDINYYPVPEARNSNMRHRPIGIGVQGLADVFMIMRHP 519
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR 597
+ES EA++LN+ IFETIYY AL AS ELA +G Y+TY GSP SKG LQ D+W + PSDR
Sbjct: 520 WESDEARELNRAIFETIYYAALVASNELAQVEGTYQTYEGSPASKGKLQPDLWGVVPSDR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW++LR I+++G+RNSLLVAPMPTASTSQILGNNECFEPYT+NIYTRR+L+G+F VVN
Sbjct: 580 WDWATLRANIAQHGLRNSLLVAPMPTASTSQILGNNECFEPYTTNIYTRRILAGDFTVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
+HLL++L + GLWS ALK K++ NGSV +I EIP+++K +YKTVWE+ Q+ ++DMAADR
Sbjct: 640 EHLLRELQQRGLWSPALKNKLVSHNGSVQRIEEIPDDIKKLYKTVWELPQRVIIDMAADR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
YIDQSQSLN++M +P KLTS+HFYAW KG+KTGMYYLRTR AA+AI+FTVD
Sbjct: 700 SAYIDQSQSLNVYMGEPSFAKLTSMHFYAWRKGLKTGMYYLRTRPAANAIQFTVD 754
>gi|383280241|pdb|3TB9|A Chain A, Structure Of Yeast Ribonucleotide Reductase 1 Q288a With
Amppnp And Cdp
gi|383280242|pdb|3TBA|A Chain A, Structure Of Yeast Ribonucleotide Reductase 1 Q288a With
Dgtp And Adp
Length = 888
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/785 (62%), Positives = 631/785 (80%), Gaps = 15/785 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPV+FDKITAR+ +L YGL +H D V V Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ ++D+Y Y N +GK A +++DDV
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ +V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++AL+TY+LMS +FTHA+PTLFNAGTP+PQ+SSCFL+ MK+DSIEGIYDTLK+CA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNG++PM++VFN+TARYVD GG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDAGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV ++G W+LF P+ A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+EGR K I A+KLW+ IL +Q ETGTP++++KD+CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRGK-TIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+ETAVCNLAS+ALP ++ S D K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+ K++T NLN++ID N+YP+E R+SN+RHRPI +G+QGLADTF+LL LPF+S
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN IFETIY+ +++AS ELA KDGPYET+ GSP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K+GVRNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W +K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLN+ + P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D + +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKIADQAT 765
Query: 781 ANRAD 785
N AD
Sbjct: 766 ENVAD 770
>gi|148224574|ref|NP_001084312.1| ribonucleotide reductase M1 [Xenopus laevis]
gi|49256098|gb|AAH74185.1| RRM1 protein [Xenopus laevis]
Length = 797
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/816 (63%), Positives = 647/816 (79%), Gaps = 25/816 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ E DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNLEFVDPAQITMKVIQGLYSGVTTIELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA RVAVSNLHK TK FS+ ++D+YNY N + K + +V+ +
Sbjct: 61 AETAATLTTKHPDYAILAARVAVSNLHKETKKIFSDVMEDLYNYVNPLNSKHSPMVSRET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ +IIYDRDF +++FGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSSIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLLCMKDDSIEGIYDTLK+CA+
Sbjct: 181 TDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+F+FLDL+KN GKEE RARDLFYA+W+PDLFM+R ++ WSL CP + GL
Sbjct: 301 LEPWHYDVFDFLDLKKNTGKEEQRARDLFYAMWIPDLFMKRAENNLDWSLMCPHECPGLE 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG +FE LY +YE EGR + V+ A+++W I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGDKFEELYEKYEREGRTRKVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSDKEVAVCNLASLALNMYV-------------------TPERSF 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LA+VTK+I NLNKII++N YP+ SN +HRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLADVTKVIVRNLNKIIEINFYPVPEAEYSNKKHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+AQ LNK IFETIYY AL++S ELA + GPYETY G P+SKGILQ DMWN+TP+D WDW
Sbjct: 522 EKAQMLNKQIFETIYYAALESSCELAKELGPYETYEGCPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 TALKEKIAKYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+KDLTE GLW+ +K +II NGS+ + +IP +LK +YKTVWEI QKT++ MAADRG +
Sbjct: 642 MKDLTEQGLWNEEMKNQIIANNGSIQNVPDIPADLKELYKTVWEISQKTVITMAADRGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L ++
Sbjct: 702 IDQSQSLNIHVAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKEKE 761
Query: 781 ------ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ + E N A +VCSL+N++EC+ CGS
Sbjct: 762 LITMETTEKDKEEKEKNKAAMVCSLENRDECLMCGS 797
>gi|158299261|ref|XP_554103.3| AGAP010198-PA [Anopheles gambiae str. PEST]
gi|157014280|gb|EAL39294.3| AGAP010198-PA [Anopheles gambiae str. PEST]
Length = 809
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/819 (62%), Positives = 646/819 (78%), Gaps = 28/819 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKE V DKIT+R++KL YGL+ + DPV + +V G+Y GVTT +LD LA
Sbjct: 10 MYVFKRDGRKEEVHLDKITSRIQKLCYGLNMDFVDPVAITLRVINGLYSGVTTQELDNLA 69
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T +H DYA+LA R+AVSNLHK TK FSE + D+Y N+ K+ +++D
Sbjct: 70 AETAATLTTDHADYAILAARLAVSNLHKETKKQFSEVMHDLYMMENEFLKTKSPMISDFH 129
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++IM NA L+ AIIYDRDF ++YFGFKTLERSYLLK+ ++VERPQHMLMRV++GIH
Sbjct: 130 YKVIMDNADRLNSAIIYDRDFGYNYFGFKTLERSYLLKIKGKIVERPQHMLMRVAIGIHG 189
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ +FTHA+PT+F A T +PQLSSCFLL M +DSIEGIYDTLK+CA+
Sbjct: 190 EDIDAAIETYNLLSERYFTHASPTMFAAATQRPQLSSCFLLTMSEDSIEGIYDTLKQCAL 249
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA G+YI GTNG SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 250 ISKSAGGIGLNVHCIRAKGTYISGTNGISNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 309
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARD+FYALW+PDLFM+RV + WSL CP D GL+
Sbjct: 310 LEPWHGDIFEFLDLKKNTGKEEVRARDMFYALWIPDLFMQRVEANEMWSLMCPHDCPGLS 369
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D+WG EFE LY+ YE+EGR + A+ LWF I+ SQ+ETG PYML+KD+CNRKSNQQN+
Sbjct: 370 DTWGEEFEKLYTGYEKEGRFIRQVKAQDLWFAIIESQVETGVPYMLYKDACNRKSNQQNI 429
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+SS +E AVCNLASIAL +V++ ++ +
Sbjct: 430 GTIKCSNLCTEIVEYSSKDEVAVCNLASIALNMFVKQ-------------------DKTY 470
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EV K +T NLNKIIDVN+YP+ +RSN+RHRPIGIG+QG+AD FIL+ P+ES
Sbjct: 471 DFAKLKEVAKTVTRNLNKIIDVNYYPVPEAKRSNMRHRPIGIGVQGMADAFILMRYPYES 530
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ+LN+ IFETIYY AL+AS ELA +DGPYETY GSP+SKGILQ +MWN P+D W+W
Sbjct: 531 EEAQKLNQQIFETIYYGALEASCELAARDGPYETYEGSPVSKGILQYEMWNKEPTDLWNW 590
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+E I+K+G+RNSLL+APMPTAST+QILGNNE FEPYTSN+Y RRVLSGEF VVN HL
Sbjct: 591 AELKEKIAKHGIRNSLLLAPMPTASTAQILGNNESFEPYTSNVYNRRVLSGEFQVVNHHL 650
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLT +GLW +K +I+ NGS+ KI+ IP+E++ +YKTVWEI KT + MAADRG +
Sbjct: 651 LQDLTNMGLWDLDMKNEILSNNGSIQKIAAIPQEIRDLYKTVWEISVKTCIKMAADRGAF 710
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN-- 778
IDQSQS NIH+ +P++GKLTS+HFY W G+KTGMYYLRT+ A +AI+FTVD + L N
Sbjct: 711 IDQSQSFNIHVAEPNYGKLTSIHFYGWKMGLKTGMYYLRTKPAVNAIQFTVDKTKLQNGN 770
Query: 779 -EKANRADND----VEAN--LAQVVCSLKNQEECMACGS 810
+R N+ E N +A++VCSL+N++ECM CGS
Sbjct: 771 ESNVSRMSNENGSFAERNRRMAEMVCSLENKDECMMCGS 809
>gi|46121591|ref|XP_385350.1| hypothetical protein FG05174.1 [Gibberella zeae PH-1]
Length = 913
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/802 (62%), Positives = 626/802 (78%), Gaps = 36/802 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDEL- 59
M+V KRDGR+E V+FDKITAR+ +L YGL H DPV + QKV +GVY GVTT QLD+L
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTIQLDDLV 60
Query: 60 -----------------AAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMY 102
AAETAA MTV HPDYA+LA R+AVSNLHK TK +S + D+Y
Sbjct: 61 SGVCTMTVVTSANPILQAAETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLY 120
Query: 103 NYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSR 162
++ N ++ + + +++ + YE +M++ LD AI+YDRDF+++YFGF+TL RSYLL++D +
Sbjct: 121 HWVNPKNDRASPMISKETYECVMRHKEELDSAIVYDRDFNYNYFGFRTLSRSYLLQIDGK 180
Query: 163 VVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLC 222
+ ERPQHM+MRV+VGI DD + L+TY+LMS +FTHA+PTLFNAGTPQPQLSSCFL+
Sbjct: 181 IAERPQHMIMRVAVGIWGDDIERVLETYNLMSSKFFTHASPTLFNAGTPQPQLSSCFLVD 240
Query: 223 MKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDT 282
MK+DSI+GIYDTLK CA+ISK AGGIGL+ H IRA+GSYI GTNG+SNGIVPML+VFN+T
Sbjct: 241 MKEDSIDGIYDTLKTCAMISKMAGGIGLNAHRIRATGSYIAGTNGTSNGIVPMLRVFNNT 300
Query: 283 ARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERV 342
ARYVDQGG KR GAFAIYLEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV
Sbjct: 301 ARYVDQGGNKRPGAFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRV 360
Query: 343 RDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGT 402
+G+W+L CP++ GLAD +G EFE LY +YE EG+ + I A+KLW+ IL +Q ETG
Sbjct: 361 ERNGEWTLMCPNECPGLADCYGDEFEALYEKYEREGKGRKSIKAQKLWYAILEAQTETGN 420
Query: 403 PYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPV 462
P+ML+KD CNRKSNQ+NLGTI+SSNLCTEI+E+ +P+E AVCNLAS++LP ++
Sbjct: 421 PFMLYKDHCNRKSNQKNLGTIRSSNLCTEIIEYCAPDEVAVCNLASLSLPSFI------- 473
Query: 463 QSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGI 522
+ ++ +DF++L EVT+++ NLNKIIDVNHYP++ R SN+RHRPIG+
Sbjct: 474 -----------NYEDACYDFKKLHEVTQVVVRNLNKIIDVNHYPVQEARNSNMRHRPIGL 522
Query: 523 GIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSK 582
G+QGLAD F+ L +PFESPEA++LNK IFETIY+ AL S +LA ++GPY T+ GSP S+
Sbjct: 523 GVQGLADAFLALRMPFESPEARELNKQIFETIYHAALTTSVQLAKEEGPYSTFKGSPASE 582
Query: 583 GILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
GILQ DMWN+ PSD WDW LRE + +G+RNSLLVAPMPTASTSQILGNNECFEPYTSN
Sbjct: 583 GILQFDMWNVKPSDLWDWEPLREDVKTHGIRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
Query: 643 IYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTV 702
IY RRVL+GEF VVN LLKDL ++GLWS A+K +II +NGS+ I IP E+KA+YKTV
Sbjct: 643 IYQRRVLAGEFQVVNPWLLKDLVDMGLWSDAMKNRIIADNGSIQNIPNIPAEIKALYKTV 702
Query: 703 WEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRA 762
WEI Q+ +V MAADRG +IDQSQSLNIHM+ P GK+TS+HF W G+KTGMYYLRT+A
Sbjct: 703 WEISQRQVVQMAADRGAFIDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQA 762
Query: 763 AADAIKFTVDTSVLNNEKANRA 784
AA I+FTVD L +N A
Sbjct: 763 AAAPIQFTVDQENLKIADSNSA 784
>gi|156838441|ref|XP_001642926.1| hypothetical protein Kpol_411p13 [Vanderwaltozyma polyspora DSM
70294]
gi|156113506|gb|EDO15068.1| hypothetical protein Kpol_411p13 [Vanderwaltozyma polyspora DSM
70294]
Length = 883
Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/792 (62%), Positives = 638/792 (80%), Gaps = 17/792 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGR+EPVRFDKITAR+ +L YGL H DPV V Q++ GVY+GVTT +LD LA
Sbjct: 1 MYVIKRDGREEPVRFDKITARISRLCYGLDPNHIDPVKVTQRIITGVYEGVTTYELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T FS+ I ++++Y N + K A L++ DV
Sbjct: 61 AETAAYMTTVHPDYAVLAARLAVSNLHKQTTKVFSKVIDELHHYVNPENNKPAPLISKDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ +M N L+ AI+YDRDF+++YFGFKTLERSYLL+M +V ERPQHM+MRV++GIH
Sbjct: 121 YDTVMANKDELNSAIVYDRDFNYNYFGFKTLERSYLLRMKGKVAERPQHMVMRVAIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +A+++Y+LMSQ +FTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 NDIKAAIESYNLMSQRYFTHASPTLFNAGTPRPQMSSCFLVAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIRA+GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GA A+Y
Sbjct: 241 ISKTAGGIGLHIHNIRATGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAMALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV ++ W+LF PS+A GL
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENADWTLFSPSEAPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ +G EFE LY++Y EEGR K I A+KLW+ IL +Q ETGTP+ML+KD+CN KSNQ+NL
Sbjct: 361 EVYGEEFEALYNRYVEEGRGKKTIKAQKLWYSILEAQTETGTPFMLYKDACNLKSNQRNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+S+P+ETAVCNLASIALP ++ + S+D K +
Sbjct: 421 GTIKSSNLCCEIVEYSAPDETAVCNLASIALPAFIEK--------------SKDEKQSFY 466
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L ++ K++T NLN++ID N+YP++ + SN RHRPI +G+QGLAD F+LL +PFES
Sbjct: 467 NFKKLHDIAKVVTRNLNRVIDRNYYPVQEAKNSNFRHRPIALGVQGLADAFMLLRIPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFET+Y+ AL+AS ELA ++G Y+T+ GSP S+GILQ DMWN P+D WDW
Sbjct: 527 KEAKELNIHIFETLYHGALEASCELAQEEGAYQTFKGSPASEGILQFDMWNRKPTDLWDW 586
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+ I +G+RNSL++APMPTASTSQILG NECFEP+TSN+Y RRVLSGEF +VN +L
Sbjct: 587 DTLKSNIIAHGIRNSLVMAPMPTASTSQILGYNECFEPFTSNMYQRRVLSGEFQIVNPYL 646
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W+ ++K +I +NGS+ + +P+ELK +YKTVWEI QKT++DM+ADR +
Sbjct: 647 LRDLVDLGIWNESMKQHLITDNGSIQNLPNVPQELKDLYKTVWEISQKTIIDMSADRSAF 706
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS S+NIH+ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V EK
Sbjct: 707 IDQSHSMNIHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKKVA--EK 764
Query: 781 ANRADNDVEANL 792
A + D+ ANL
Sbjct: 765 AGESVADI-ANL 775
>gi|154297725|ref|XP_001549288.1| hypothetical protein BC1G_12274 [Botryotinia fuckeliana B05.10]
gi|347829519|emb|CCD45216.1| similar to ribonucleoside-diphosphate reductase subunit large
[Botryotinia fuckeliana]
Length = 909
Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/776 (64%), Positives = 618/776 (79%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKE V+FDKITAR+ +L YGL +H D + QKV +GVY+GV T +LD LA
Sbjct: 1 MYVYKRDGRKERVQFDKITARVSRLCYGLDPDHIDAAAITQKVISGVYQGVNTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS I+D+Y Y N R+G + +++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSHVIRDLYQYTNPRNGTASPMISKQT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++ L+ AI+YDRDF++ YFGFKTLERSYLL++D +V ERPQ M+MRV+VGIH
Sbjct: 121 YECVMRHEEELNSAIVYDRDFNYQYFGFKTLERSYLLRLDGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA++TY+LMS +FTHA+PTLF+AGTPQ QLSSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 DDIESAIETYNLMSNKYFTHASPTLFSAGTPQAQLSSCFLIDMKEDSIDGIYDTLKICAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IRA+G+YI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKNAGGIGLNIHRIRATGAYIAGTNGNSNGIVPMLRVFNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDLRKN GKEE RARDLFYALW+PDLFM+RV +G+W+L CP++ GLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY YE+ G+ + I A+KLW+ IL +Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKAGKGRKTIKAQKLWYSILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+S+P+E A CNLASIALP +V + +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVACCNLASIALPTFV------------------NMNEGTY 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EV +++ NLNKIID+N+YP+ R+SN RHRPI +G+QGLAD F+ L LPF+S
Sbjct: 463 DFQKLHEVVQVVVRNLNKIIDINYYPVPEARKSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+ LN IFETIY+ AL +S E+A + GPYETY GSP+SKG LQ DMW +TP+D WDW
Sbjct: 523 PEAKHLNIQIFETIYHAALTSSVEIAKELGPYETYQGSPVSKGELQYDMWGVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I ++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DSLKQSIKQHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ++GLWS +K +II + GS+ I IP ++KA+YKTVWEI Q+T+V MAADRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQS+NIHM+ P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD L
Sbjct: 703 IDQSQSMNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEAL 758
>gi|444318263|ref|XP_004179789.1| hypothetical protein TBLA_0C04740 [Tetrapisispora blattae CBS 6284]
gi|387512830|emb|CCH60270.1| hypothetical protein TBLA_0C04740 [Tetrapisispora blattae CBS 6284]
Length = 889
Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/795 (62%), Positives = 645/795 (81%), Gaps = 20/795 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPVRFDKITAR+ +L YGL H DPV V Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVCKRDGRKEPVRFDKITARVSRLCYGLDSNHIDPVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA LA R+A+SNLHK T FS ++++ NY N + K A LV++++
Sbjct: 61 AETAAYMTTIHPDYATLAARLAISNLHKQTTKLFSTVVEELRNYVNPENNKWAPLVSEEL 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE + K+ ++ AI+YDRDF F+YFGFKTLERSYLLKM +V ERPQHM+MRV++GIH
Sbjct: 121 YETVQKHKDEINSAIVYDRDFQFNYFGFKTLERSYLLKMYGKVAERPQHMIMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++AL+TY+LMSQ +FTHA+PTLFNAGTP+PQ+SSCFL+ MK+DS+EGI+DTLK+CA+
Sbjct: 181 EDIEAALETYNLMSQRYFTHASPTLFNAGTPRPQMSSCFLVAMKEDSLEGIFDTLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGG+G+ IH+IRA+GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GA A++
Sbjct: 241 ISKSAGGLGVHIHDIRATGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAIALF 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV+++G W+LF PS+A GL+
Sbjct: 301 LEPWHDDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVKENGDWTLFSPSEAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++Y EEG+ + I A+KLW+ IL +Q ETGTP++ +KD+ N+KSNQ+NL
Sbjct: 361 DVYGDEFEALYNRYVEEGKGRRTIKAQKLWYSILEAQTETGTPFICYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EI+E+S+P+ETAVCNLAS+ALP ++++ + D + ++
Sbjct: 421 GTIKSSNLCCEIIEYSAPDETAVCNLASVALPAFIKK--------------TDDGNSFIY 466
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L E+TK+IT NLNK+ID N+YP+ + SN+RHRP+ +G+QGLADTF +L LPFES
Sbjct: 467 DFEKLHEITKVITRNLNKVIDRNYYPVPEAKNSNMRHRPVALGVQGLADTFQILRLPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN IFET+Y+ AL+AS E+A +GPY TY GSP+S+GILQ DMW++TP+D WDW
Sbjct: 527 DEARDLNAHIFETMYHAALEASCEIAAVEGPYSTYEGSPVSQGILQYDMWDVTPTDLWDW 586
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+ I K+GVRNSLL+APMPTASTSQILG NECFEP+TSN+Y+RR LSGEF +VN +L
Sbjct: 587 DSLKANIKKHGVRNSLLLAPMPTASTSQILGYNECFEPFTSNMYSRRTLSGEFQIVNPYL 646
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W A+K +I +NGS+ K+ IP+ELK +YKTVWEI QK ++DMAADR +
Sbjct: 647 LRDLVDLGIWDDAMKQHLITDNGSIQKLPNIPQELKELYKTVWEISQKKIIDMAADRSAF 706
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLNIH++ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D +
Sbjct: 707 IDQSHSLNIHIQAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKKI----- 761
Query: 781 ANRADNDVEANLAQV 795
A++A N V A+L+++
Sbjct: 762 ADQAGNKV-ADLSKL 775
>gi|383875419|pdb|3S8A|A Chain A, Structure Of Yeast Ribonucleotide Reductase R293a With
Dgtp
gi|383875421|pdb|3S8C|A Chain A, Structure Of Yeast Ribonucleotide Reductase 1 R293a With
Amppnp And Cdp
Length = 888
Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/785 (62%), Positives = 631/785 (80%), Gaps = 15/785 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPV+FDKITAR+ +L YGL +H D V V Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ ++D+Y Y N +GK A +++DDV
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ +V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++AL+TY+LMS +FTHA+PTLFNAGTP+PQ+SSCFL+ MK+DSIEGIYDTLK+CA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG K GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKAPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV ++G W+LF P+ A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+EGR K I A+KLW+ IL +Q ETGTP++++KD+CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRGK-TIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+ETAVCNLAS+ALP ++ S D K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+ K++T NLN++ID N+YP+E R+SN+RHRPI +G+QGLADTF+LL LPF+S
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN IFETIY+ +++AS ELA KDGPYET+ GSP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K+GVRNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W +K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLN+ + P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D + +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKIADQAT 765
Query: 781 ANRAD 785
N AD
Sbjct: 766 ENVAD 770
>gi|384097000|ref|ZP_09998121.1| ribonucleoside-diphosphate reductase, large subunit [Imtechella
halotolerans K1]
gi|383836968|gb|EID76368.1| ribonucleoside-diphosphate reductase, large subunit [Imtechella
halotolerans K1]
Length = 793
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/816 (62%), Positives = 642/816 (78%), Gaps = 29/816 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+EPV FDKITAR++KL YGL+ + DPV VA +V G+Y GVTT++LD LA
Sbjct: 1 MYVLKRDGRQEPVMFDKITARVRKLCYGLN-DLVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT HPDYA LA R++VSNLHK TK SFSET+ D+YNY N R+ + A L++D+V
Sbjct: 60 AEIAATMTTTHPDYARLAARISVSNLHKNTKKSFSETMNDLYNYVNPRTEQAAPLISDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++II NA LD IIY+RDF +DYFGFKTLERSYLLK++ +VERPQHMLMRV+VGIH
Sbjct: 120 HDIIQANADFLDSTIIYNRDFGYDYFGFKTLERSYLLKINGNIVERPQHMLMRVAVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +S ++TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL MKDDSI+GIYDTLK+ A
Sbjct: 180 DDMESVVETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPML+V+NDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADI +FLDL+KN GKEE RARDLFYA+W+PDLFM+RV++D +W+L CP++ GL
Sbjct: 300 IEPWHADIMDFLDLKKNHGKEEMRARDLFYAMWIPDLFMKRVQEDSRWTLMCPNECPGLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D FE LY +YE EG+ + I AR+LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 DVHSDSFEELYLRYEAEGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+++P+E AVCNLAS+ALP +V KN F
Sbjct: 420 GTIRSSNLCTEIMEYTAPDEVAVCNLASVALPMFV--------------------KNGEF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +VTK +T NLN++ID N+YP+ + SN RHRP+G+G+QGLADTFI+L +PF S
Sbjct: 460 DHKELFKVTKRVTRNLNRVIDRNYYPVIEAQNSNFRHRPVGLGVQGLADTFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA++LN++IFET+Y+ A+ AS ELA ++GPY+T+ GSP+S+G Q +MW I S R
Sbjct: 520 DEAKKLNQEIFETMYFAAVTASMELAKEEGPYDTFKGSPISQGEFQHNMWGIKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+ LR+ + KNGVRNSLL+APMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWAKLRKDVIKNGVRNSLLMAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL LGLW+ LK +I+ NGS+ +I IP E+K +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVALGLWNEDLKQEIMRANGSIQEIDIIPHEIKELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQSLN+ ME KLTS+HFYAW G+KTGMYYLRT++A DAIKFTV
Sbjct: 700 GYFIDQSQSLNLFMEGATMAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTVQKKQET 759
Query: 778 NEKANR---ADNDVEANLAQVVCSLKNQEECMACGS 810
A ++++A +AQ S ++C+ CGS
Sbjct: 760 KPTAESQPLTSDELKAMIAQAKAS--EGDDCLMCGS 793
>gi|336171887|ref|YP_004579025.1| ribonucleoside-diphosphate reductase subunit alpha [Lacinutrix sp.
5H-3-7-4]
gi|334726459|gb|AEH00597.1| ribonucleoside-diphosphate reductase, alpha subunit [Lacinutrix sp.
5H-3-7-4]
Length = 827
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/802 (63%), Positives = 629/802 (78%), Gaps = 26/802 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGRKEP+ FDKITAR++KL YGL+ E DP+ VA +V G+Y GVTT++LD LA
Sbjct: 1 MFVLKRDGRKEPIMFDKITARVRKLCYGLN-ELVDPIKVAMRVIDGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT HPDYA LA R++VSNLHK TK +FS+ + D+Y Y N R+GKKA L++D+V
Sbjct: 60 AEQAATMTTAHPDYARLAARISVSNLHKNTKKTFSDVMTDLYQYVNPRTGKKAPLLSDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y +IM+N LD AIIY+RDF +DYFGFKTLERSYLLK++ + ERPQHMLMRVS+GIH
Sbjct: 120 YNVIMENKEKLDSAIIYNRDFGYDYFGFKTLERSYLLKINGEIAERPQHMLMRVSIGIHI 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+AL+TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL MKDDSI+GIYDTLK+ A
Sbjct: 180 NDLDAALETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIAGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF FLDL+KN G EE RARDLFYA+W+PDLFM+RV++D +W+L CP++ GL
Sbjct: 300 IEPWHADIFNFLDLKKNHGAEELRARDLFYAMWMPDLFMKRVQEDAQWTLMCPNECPGLC 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D EFE LY++YE EG+ + I AR+LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 DVHSEEFEALYTKYEAEGKGRKSIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++S +E AVCNLASIALP +V KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSEDEVAVCNLASIALPMFV--------------------KNGEF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +TK +T+NLNK+ID N+YP++ SN RHRP+G+G+QGLAD FI L +PF S
Sbjct: 460 DHKELFRITKRVTKNLNKVIDRNYYPVKEAENSNFRHRPVGLGVQGLADAFIKLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI---TPSDR 597
A+QLN+DIFET+YY A+ AS E A DGPY+TY GSPMSKG Q ++WNI T S R
Sbjct: 520 DAAKQLNQDIFETLYYAAVTASMEEAQVDGPYQTYEGSPMSKGEFQHNLWNIQEDTLSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW LR+ ++K+GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWEKLRKQVAKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL +LGLW+ LK +I+ NGS+ + IP+++K +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVDLGLWNEDLKNEIMRANGSIQHVENIPQDIKDLYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD--TSV 775
G +IDQSQSLN+ ME KLTS+HFYAW G+KTGMYYLRT++A DA K T+ T
Sbjct: 700 GYFIDQSQSLNLFMEGATMAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAKKVTISRATKA 759
Query: 776 LNNEKANRADNDVEANLAQVVC 797
K DND A Q
Sbjct: 760 APVTKEVAVDNDGVAQKQQTAA 781
>gi|557803|emb|CAA86157.1| rir3 [Saccharomyces cerevisiae]
gi|323304492|gb|EGA58258.1| Rnr3p [Saccharomyces cerevisiae FostersB]
gi|392298850|gb|EIW09946.1| Rnr3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 885
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/775 (63%), Positives = 622/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPV+FDKIT+R+ +LSYGL D V V Q++ +GVY GVTT +LD LA
Sbjct: 17 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 76
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ I+D++++ N +GK A +++D++
Sbjct: 77 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 136
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ V ERPQH++MRV++GIH
Sbjct: 137 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 196
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +S LKTY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 197 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 256
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+GL I+NIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA++
Sbjct: 257 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 316
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RK GKEE RARDLF ALW+PDLFM+RV++DG W+LF PS A GL
Sbjct: 317 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSAAPGLD 376
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EGR K I A+KLW+ IL +Q ETGTP+M++KD+CNRK+NQQNL
Sbjct: 377 DVWGDEFEELYTRYEREGRGK-TIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 435
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+SSP+ETAVCNLASIALP +V S D K +
Sbjct: 436 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 481
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FERL E+ K+IT NLN++ID N+YP+ R SN++HRPI +G+QGLADT+++L LPFES
Sbjct: 482 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 541
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIY+ L+AS ELA K+G Y T+ GSP SKGILQ DMWN P WDW
Sbjct: 542 EEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 601
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 602 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 661
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W ++K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 662 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 721
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQS SLN+ ++ P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V
Sbjct: 722 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 776
>gi|259147192|emb|CAY80445.1| Rnr3p [Saccharomyces cerevisiae EC1118]
Length = 885
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/775 (63%), Positives = 622/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPV+FDKIT+R+ +LSYGL D V V Q++ +GVY GVTT +LD LA
Sbjct: 17 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 76
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ I+D++++ N +GK A +++D++
Sbjct: 77 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 136
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ V ERPQH++MRV++GIH
Sbjct: 137 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 196
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +S LKTY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 197 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 256
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+GL I+NIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA++
Sbjct: 257 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 316
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RK GKEE RARDLF ALW+PDLFM+RV++DG W+LF PS A GL
Sbjct: 317 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGSWTLFSPSAAPGLD 376
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EGR K I A+KLW+ IL +Q ETGTP+M++KD+CNRK+NQQNL
Sbjct: 377 DVWGDEFEELYTRYEREGRGK-TIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 435
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+SSP+ETAVCNLASIALP +V S D K +
Sbjct: 436 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 481
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FERL E+ K+IT NLN++ID N+YP+ R SN++HRPI +G+QGLADT+++L LPFES
Sbjct: 482 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 541
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIY+ L+AS ELA K+G Y T+ GSP SKGILQ DMWN P WDW
Sbjct: 542 EEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 601
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 602 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 661
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W ++K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 662 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 721
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQS SLN+ ++ P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V
Sbjct: 722 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 776
>gi|398364373|ref|NP_012198.3| ribonucleotide-diphosphate reductase subunit RNR3 [Saccharomyces
cerevisiae S288c]
gi|730516|sp|P21672.4|RIR3_YEAST RecName: Full=Ribonucleoside-diphosphate reductase large chain 2;
AltName: Full=Ribonucleotide reductase DNA
damage-inducible regulatory subunit 2; AltName:
Full=Ribonucleotide reductase R1 subunit 2; AltName:
Full=Ribonucleotide reductase large subunit 2
gi|151943097|gb|EDN61432.1| ribonucleotide reductase, large (R1) subunit [Saccharomyces
cerevisiae YJM789]
gi|285812585|tpg|DAA08484.1| TPA: ribonucleotide-diphosphate reductase subunit RNR3
[Saccharomyces cerevisiae S288c]
Length = 869
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/775 (63%), Positives = 622/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPV+FDKIT+R+ +LSYGL D V V Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ I+D++++ N +GK A +++D++
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +S LKTY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+GL I+NIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RK GKEE RARDLF ALW+PDLFM+RV++DG W+LF PS A GL
Sbjct: 301 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSAAPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EGR K I A+KLW+ IL +Q ETGTP+M++KD+CNRK+NQQNL
Sbjct: 361 DVWGDEFEELYTRYEREGRGK-TIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+SSP+ETAVCNLASIALP +V S D K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FERL E+ K+IT NLN++ID N+YP+ R SN++HRPI +G+QGLADT+++L LPFES
Sbjct: 466 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIY+ L+AS ELA K+G Y T+ GSP SKGILQ DMWN P WDW
Sbjct: 526 EEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W ++K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQS SLN+ ++ P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 760
>gi|163753570|ref|ZP_02160693.1| ribonucleoside diphosphate reductase, alpha subunit [Kordia
algicida OT-1]
gi|161325784|gb|EDP97110.1| ribonucleoside diphosphate reductase, alpha subunit [Kordia
algicida OT-1]
Length = 812
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/774 (65%), Positives = 625/774 (80%), Gaps = 24/774 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGRKEP+ FDKIT+R++KL YGL+ DPV VA +V G+Y GVTT++LD LA
Sbjct: 1 MFVVKRDGRKEPMMFDKITSRVRKLCYGLNN-LVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT HPDYA LA R++VSNLHK TK SFSET+ D+Y Y N R+GKKA L++D+V
Sbjct: 60 AEIAATMTTTHPDYARLAARISVSNLHKNTKKSFSETMVDLYEYVNPRTGKKAPLLSDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y +IM+NA LD IIY+RDF +DYFGFKTLERSYLLK++ ++ ERPQHMLMRVSVGIH
Sbjct: 120 YNVIMENADRLDSTIIYNRDFGYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL M+DDSI+GIYDTLK+ A
Sbjct: 180 NDLDAAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPML+V+NDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FLDL+KN GKEE RARDLFYA+W+PDLFM+RV ++G W+L CP++ L
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWIPDLFMKRVEENGPWTLMCPNECPNLF 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ EFE LY +YE EG+ + I AR+LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 NVHSEEFEALYLKYEAEGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLASIALP ++ K F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFI--------------------KGGEF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L VTK +T+NLNK+ID N+YP++ SN RHRPIG+G+QGLADTFI L +PF S
Sbjct: 460 DHKELFRVTKRVTKNLNKVIDRNYYPVKEAENSNFRHRPIGLGVQGLADTFIKLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA++LN++IFET+Y+ A+ AS E+A +GPY+TY GSPMSKG Q ++W I S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEMAKIEGPYQTYEGSPMSKGEFQHNLWGIKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW LR+ ++KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWGKLRKQVAKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL LGLW+ LK +++ NGS+ I EIP+++K +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVNLGLWTEDLKQELMRANGSIQHIDEIPQDIKDLYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
G +IDQSQSLN+ ME KLTS+HFYAW G+KTGMYYLRT++A DAIKFTV
Sbjct: 700 GYFIDQSQSLNLFMEGATMAKLTSMHFYAWRSGLKTGMYYLRTKSAVDAIKFTV 753
>gi|50426387|ref|XP_461790.1| DEHA2G05610p [Debaryomyces hansenii CBS767]
gi|49657460|emb|CAG90249.1| DEHA2G05610p [Debaryomyces hansenii CBS767]
Length = 867
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/778 (62%), Positives = 631/778 (81%), Gaps = 16/778 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPVRFDKITAR+++L YGL H +PV + Q+V +GVY+GV T +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLDTTHVEPVAITQRVISGVYQGVNTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T FS+ K++Y Y N ++ + +++ D
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQFSQVSKELYEYVNPKTDLHSPMISKDT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II NA L+ AI++DRDF+++YFGFKTLERSYLL+++ +V ERPQH++MRV+VGIH
Sbjct: 121 YDIIQANANELNSAIVFDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + +++Y++MS +FTH +PTLFNAGTP PQ+SSCFL+ MKDDSI+GIYDTLK CA+
Sbjct: 181 NDIERVIESYNMMSLRYFTHGSPTLFNAGTPSPQMSSCFLVAMKDDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIR++G+YI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV +G W+LF P++A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAKGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+E R + V+ A+KLW+ IL++Q ETGTP+ML+KD+CN+K+NQ+NL
Sbjct: 361 DVYGDEFEELYTKYEKENRGRSVVKAQKLWYAILDAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+E AVCNLASIALP +V +++ +
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPAFV----------------DKNNTTSWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L EVTK++T NLN+IID N+YP+ R SN+R+RPI +G+QGLAD F+ L LPF+S
Sbjct: 465 DFEKLHEVTKVVTRNLNRIIDRNYYPVPEARNSNMRNRPIALGVQGLADAFMALRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ A++AS ELA +GPY+TY GSP SKGILQ D+W P++ WDW
Sbjct: 525 QEAKELNTQIFETIYHGAVEASIELAEIEGPYQTYEGSPASKGILQFDLWERKPTELWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ ++K+G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN +L
Sbjct: 585 DTLKQKLAKHGIRNSLLVAPMPTASTSQILGYNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W+ +K II NGS+ + IP+ELKA+YKTVWEI QK ++DMAADR +
Sbjct: 645 LRDLVDLGIWNDDMKNNIISNNGSIQTLPNIPDELKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN 778
IDQSQSLNIH++ P GKLTS+HFY W KG+KTGMYYLRT+AAA AI+FTVD + +NN
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVDQNSVNN 762
>gi|349578887|dbj|GAA24051.1| K7_Rnr3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 869
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/775 (63%), Positives = 622/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPV+FDKIT+R+ +LSYGL D V V Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ I+D++++ N +GK A +++D++
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +S LKTY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+GL I+NIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV ++G W+LF PS A GL
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPSAAPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EGR K I A+KLW+ IL +Q ETGTP+M++KD+CNRK+NQQNL
Sbjct: 361 DVWGDEFEELYTRYEREGRGK-TIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+SSP+ETAVCNLASIALP +V S D K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FERL E+ K+IT NLN++ID N+YP+ R SN++HRPI +G+QGLADT+++L LPFES
Sbjct: 466 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIY+ L+AS ELA K+G Y T+ GSP SKGILQ DMWN P WDW
Sbjct: 526 EEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W ++K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQS SLN+ ++ P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 760
>gi|50557402|ref|XP_506109.1| YALI0F31735p [Yarrowia lipolytica]
gi|49651979|emb|CAG78922.1| YALI0F31735p [Yarrowia lipolytica CLIB122]
Length = 892
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/801 (62%), Positives = 632/801 (78%), Gaps = 16/801 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
++VIKRDGRKE V+ DKITAR+K+L YGL +H DP+ + K+ +G+Y+GV+T +LD LA
Sbjct: 4 LFVIKRDGRKESVQVDKITARIKRLCYGLDPDHVDPIQITLKIASGIYEGVSTIELDNLA 63
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK TK FS+ + D+Y+Y N R+ K + +V+ ++
Sbjct: 64 AETAAYMTTLHPDYAILAARIAVSNLHKQTKKQFSQVVYDLYHYVNPRNKKHSPMVSKEL 123
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ + NA L+GAI+YDRDF ++YFGFKTLER+YLL+++ V ERPQ M+MRVSVGIH
Sbjct: 124 YDTVQANADELNGAILYDRDFTYNYFGFKTLERAYLLRVNGAVAERPQQMIMRVSVGIHG 183
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ A++TY+ MSQ +FTHA+PTL+NAGTPQPQ+SSCFL+ MKDDSI+GIYDTLK CA+
Sbjct: 184 DNIARAIETYNYMSQKYFTHASPTLYNAGTPQPQMSSCFLVNMKDDSIDGIYDTLKTCAL 243
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLSIHNIRA+GSYI GTNG+SNGIVPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 244 ISKSAGGIGLSIHNIRATGSYIAGTNGTSNGIVPMLRVYNNTARYVDQGGNKRPGAFAMY 303
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEF +LRKN GKEE RARDLF ALW+PDLFMERV + +W+L CP++ GL
Sbjct: 304 LEPWHDDIFEFCELRKNHGKEEIRARDLFLALWIPDLFMERVEQNAEWTLMCPNECPGLD 363
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY QYE+EGR + I A+KLW+ IL+ Q E+G P+ML+KDSCNRKSNQ+NL
Sbjct: 364 DVYGDEFKQLYEQYEKEGRGRRTIPAQKLWYHILDCQTESGNPFMLYKDSCNRKSNQKNL 423
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+SSP+E AVCNLASIALP +V +RD N +
Sbjct: 424 GTIKSSNLCCEIVEYSSPDEVAVCNLASIALPTFV----------------TRDDTNSFY 467
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L ++ K+I NLN IID N+YP+ ++SN+RHRPI +G+QGLADTF+ L LPFES
Sbjct: 468 DFKKLHDIAKVIVRNLNAIIDRNYYPVPEAKKSNMRHRPIALGVQGLADTFMALRLPFES 527
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ A++AS E+A++DG YET+ GSP SKG LQ D+WN+TPS+ W+W
Sbjct: 528 EEAKKLNIQIFETIYHGAVEASYEMALEDGAYETFQGSPASKGDLQFDLWNVTPSELWEW 587
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+ I K G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN L
Sbjct: 588 DDLKAKIMKTGMRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 647
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL E+GLW+ +K +I+ +NGSV I IP+E+K +YKTVWEI QK +++MAADR +
Sbjct: 648 LKDLVEVGLWNETMKNRIVADNGSVQNIPNIPQEIKDLYKTVWEISQKRIIEMAADRSPF 707
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH++ P GKLTS+HFY W KG+KTGMYYLRT AAA I+FT+D L
Sbjct: 708 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTMAAAAPIQFTIDQEALKTID 767
Query: 781 ANRADNDVEANLAQVVCSLKN 801
++ A + Q + S+ N
Sbjct: 768 SSTAKAMLNKKPYQEINSMAN 788
>gi|367017520|ref|XP_003683258.1| hypothetical protein TDEL_0H01880 [Torulaspora delbrueckii]
gi|359750922|emb|CCE94047.1| hypothetical protein TDEL_0H01880 [Torulaspora delbrueckii]
Length = 886
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/785 (63%), Positives = 632/785 (80%), Gaps = 14/785 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE VRFDKITAR+ +L YGL H D V + Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKEHVRFDKITARISRLCYGLDPAHIDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ + +++NY N ++G + +++ +V
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSQVVSELFNYVNPKNGVHSPMISQEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K+ L+ AI+YDRDF+F+YFGFKTLERSYLL+++ V ERPQHM+MRV+VGIH
Sbjct: 121 MDIVNKHKDELNSAIVYDRDFNFNYFGFKTLERSYLLRINGEVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA++TY+LMS +F HA+PTLFNAGTP+PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 DDIESAIETYNLMSLRYFIHASPTLFNAGTPRPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV+++G+W+LF PS+A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVQENGEWTLFSPSEAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +Y EGR + I A+KLW+ IL SQ ETGTP+ML+KD+CN KSNQ+NL
Sbjct: 361 DVYGDEFEALYERYVAEGRGRKTIKAQKLWYAILESQTETGTPFMLYKDACNIKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+S+P+ETAVCNLASIALP ++ + D K + +
Sbjct: 421 GTIKSSNLCCEIVEYSAPDETAVCNLASIALPSCIQV--------------ADDGKTQWY 466
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L ++ K+IT NLNK+ID N+YP+ R SN+R+RP+ +G+ GLAD F++L +PFES
Sbjct: 467 DFAKLHKIAKVITRNLNKVIDRNYYPVPEARNSNMRNRPMALGVNGLADVFMMLRVPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN IFETIY+ +L+AS ELA KDGPY TY GSP+S+GILQ D+WN PSD WDW
Sbjct: 527 QEAKDLNIQIFETIYHASLEASCELAKKDGPYSTYEGSPISQGILQYDLWNTKPSDLWDW 586
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ I + GVRNSLL+APMPTASTSQILG NECFEPYTSN+Y+RRVLSGEF +VN +L
Sbjct: 587 DTLKKSIKEYGVRNSLLLAPMPTASTSQILGYNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W ++K II +NGS+ + IP+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 647 LRDLVDLGIWDDSMKQHIITDNGSIQNLPNIPQELKDLYKTVWEISQKTIIEMAADRAVY 706
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D SV +
Sbjct: 707 IDQSQSLNIHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKSVADQAA 766
Query: 781 ANRAD 785
N AD
Sbjct: 767 HNIAD 771
>gi|190346673|gb|EDK38820.2| hypothetical protein PGUG_02918 [Meyerozyma guilliermondii ATCC
6260]
Length = 863
Score = 1086 bits (2809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/775 (63%), Positives = 630/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPVRFDKITAR+++L YGL H D V + Q+V +GVY+GV T +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLDTAHVDAVAITQRVISGVYQGVNTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T FS+ K++Y+Y N ++ + +++ +
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQFSQVSKELYDYINPKTDLHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I K+A L+ AI++DRDF+++YFGFKTLERSYLL+++ +V ERPQH++MRV+VGIH
Sbjct: 121 YDVIQKHADELNSAIVFDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + +++Y+LMSQ +FTH +PTLFNAGTP PQ+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 DDIEKVIESYNLMSQRYFTHGSPTLFNAGTPSPQMSSCFLVAMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIR +G+YI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRGTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIFEF+D+RKN GKEE RARDLF ALW+PDLFM+RV +G W+LF P++A GL
Sbjct: 301 LEPWHSDIFEFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLP 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ +G EFE LY +YE EGR + I A+KLW+ IL +Q ETGTP+ML+KD+CN+K+NQ+NL
Sbjct: 361 EVYGDEFEALYEKYEREGRGRSTIKAQKLWYAILEAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+SSPEE AVCNLASIALP +V D+ + +
Sbjct: 421 GIIKSSNLCCEIVEYSSPEEVAVCNLASIALPSFVES----------------DNNSTWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L EVTK +T NLN+IID N+YP+ RRSN+R+RPI +G+QGLAD F+ L LPF+S
Sbjct: 465 NFDKLHEVTKTVTGNLNRIIDRNYYPVPEARRSNMRNRPIALGVQGLADAFMALRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ A++AS ELA K+GPYE+Y GSP S+G+LQ D+W+ P++ WDW
Sbjct: 525 QEAKELNIQIFETIYHGAVEASIELAQKEGPYESYEGSPASQGLLQFDLWDRKPTELWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +VN +L
Sbjct: 585 DTLKQKMAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LGLW+ ++K II NGS+ + IP+E+KA+YKTVWEI QK ++DMAADR +
Sbjct: 645 LRDLVDLGLWNDSMKNNIISNNGSIQNLPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQSQSLNIH++ P GKLTS+HFY W KG+KTGMYYLRT+AAA AI+FTVD+S
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVDSST 759
>gi|399925485|ref|ZP_10782843.1| Ribonucleoside-diphosphate reductase, alpha subunit [Myroides
injenensis M09-0166]
Length = 794
Score = 1086 bits (2808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/815 (62%), Positives = 639/815 (78%), Gaps = 26/815 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+EPV FDKIT R++ L Y L+ E DPV VA +V G+Y GV+T++LD LA
Sbjct: 1 MYVVKRDGRREPVMFDKITDRIRILCYELN-ELVDPVKVAMRVIEGLYDGVSTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MTV+HPDYALLA R+AVSNLHK TK FSE + D+YNY N R+ ++A L+ADDV
Sbjct: 60 AETAASMTVSHPDYALLAARIAVSNLHKNTKKVFSEVVDDLYNYINPRTNQEAPLIADDV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I NA LD IIY RDF++DYFGFKTLERSYLLK++ ++VERPQHMLMRV+VGIH
Sbjct: 120 YKVIKDNAERLDSTIIYQRDFNYDYFGFKTLERSYLLKLNGQIVERPQHMLMRVAVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DS ++TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL MKDDSIEGIYDTLK+ A
Sbjct: 180 DDIDSVIETYELMSKKFFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAN 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEF++LRKN GKEE RARDLF ALW+ DLFM+RV D KW+L CP++ GL
Sbjct: 300 LEPWHADIFEFIELRKNHGKEEMRARDLFLALWLNDLFMKRVEADDKWTLMCPNECPGLC 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY YE G+ + I AR+LW IL +QIETGTPYML+KD+ N KSNQ+NL
Sbjct: 360 DVYGDEFEKLYISYENAGKGRRTIKARELWEAILEAQIETGTPYMLYKDAANAKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G I+SSNLCTEI+E++SP+E AVCNLASI+LP ++ +N F
Sbjct: 420 GVIRSSNLCTEIMEYTSPDEVAVCNLASISLPMFI--------------------ENGEF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ + L +VTK IT NLN++ID N+YP+E R SN++HRP+G+G+QGLAD FI+L LPF +
Sbjct: 460 NHQFLYDVTKRITRNLNRVIDRNYYPVEEARNSNMKHRPVGLGVQGLADAFIMLRLPFTN 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
A++LNKDIFETIY+ A+ AS ELA+++GPY T+ GSP+SKG Q ++W I S R
Sbjct: 520 DAAKKLNKDIFETIYFAAVTASMELAIEEGPYSTFEGSPISKGEFQFNLWGINDDELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+ LR + ++GVRNSLL+APMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFI+VN
Sbjct: 580 WDWNELRRKVIEHGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIIVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLLKDL ELGLW+ LK +I+ NGS+ I IP +++ +YKTVWE+ K ++DMA +R
Sbjct: 640 KHLLKDLVELGLWNEDLKQEIMRANGSIQHIDYIPADIRELYKTVWELSMKDIIDMAKER 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS--V 775
G +IDQSQSLN+ ME ++ KLTS+HFYAW G+KTGMYYLRT++A DAIKFT+D +
Sbjct: 700 GYFIDQSQSLNLFMEGANYAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLDNQKKI 759
Query: 776 LNNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
N ++ + + + +N ++C CGS
Sbjct: 760 QNVIVEEINQDEYRTMIEKSRLASENDDDCEMCGS 794
>gi|402495789|ref|ZP_10842509.1| ribonucleoside-diphosphate reductase large chain [Aquimarina
agarilytica ZC1]
Length = 816
Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/777 (64%), Positives = 629/777 (80%), Gaps = 24/777 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGRKEP+ FDKITAR++++ YGL+ E DPV VA +V G+Y GVTT++LD LA
Sbjct: 1 MFVVKRDGRKEPIMFDKITARVRQMCYGLN-ELVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT+ HPDYA LA R++VSNLHK TK +FSE +KD+Y Y N R+GK A+L+ADDV
Sbjct: 60 AEIAATMTIAHPDYAQLAARISVSNLHKNTKKTFSEVVKDLYEYVNPRTGKDAALIADDV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+++M+N LD IIY+RDF +DYFGFKTLERSYLLK++ ++ ERPQHMLMRVS+GIH
Sbjct: 120 YKVVMENKEKLDSTIIYNRDFSYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSIGIHI 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD D+A++TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL M+DDSI+GIYDTLK+ A
Sbjct: 180 DDLDAAIETYELMSKKFFTHATPTLFNSGTPKPQMSSCFLLTMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYISGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FL+LRKN GKEE RARDLFYA+W+ DLFM+RV D W+L CP + GL
Sbjct: 300 MEPWHADIFDFLELRKNHGKEEMRARDLFYAMWISDLFMKRVEADENWTLMCPHECPGLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D EFE LY++YE EG+ + + AR++W ++L SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 DVHSEEFESLYTRYEAEGKGRRTVKAREVWEKVLESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLASIALP +V+ G + F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEIAVCNLASIALPMFVK--------------GGK------F 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +VTK +T+NLNK+ID N+YP++ SN+RHRP+G+GIQGLADTFI+L +PF S
Sbjct: 460 DHDELFKVTKRVTKNLNKVIDRNYYPVKQAENSNMRHRPVGLGIQGLADTFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA++LN++IFET+Y+ A+ AS ELA +G YE+Y GSP+S+G Q ++W I S R
Sbjct: 520 DEAKKLNEEIFETMYFAAVTASNELAEVEGTYESYEGSPISQGEFQFNLWGIKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW +LR I K+GVRNSLL+APMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWKALRAKIQKSGVRNSLLMAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL DL ELGLW+ LK I+ NGS+ I IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLHDLVELGLWNDDLKDAIMRANGSIQNIDGIPQDLKELYKTVWEMSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
G +IDQSQSLN+ ME ++ KLTS+HFYAW G+KTGMYYLRT++A DAIKFT+ T+
Sbjct: 700 GYFIDQSQSLNLFMEGANNAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLKTN 756
>gi|146418447|ref|XP_001485189.1| hypothetical protein PGUG_02918 [Meyerozyma guilliermondii ATCC
6260]
Length = 863
Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/775 (63%), Positives = 629/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPVRFDKITAR+++L YGL H D V + Q+V +GVY+GV T +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLDTAHVDAVAITQRVISGVYQGVNTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T FS+ K++Y+Y N ++ + +++ +
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQFSQVSKELYDYINPKTDLHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I K+A L+ AI++DRDF+++YFGFKTLERSYLL+++ +V ERPQH++MRV+VGIH
Sbjct: 121 YDVIQKHADELNSAIVFDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + +++Y+LMSQ +FTH +PTLFNAGTP PQ+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 DDIEKVIESYNLMSQRYFTHGSPTLFNAGTPSPQMSSCFLVAMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIR +G+YI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRGTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIFEF+D+RKN GKEE RARDLF ALW+PDLFM+RV +G W+LF P++A GL
Sbjct: 301 LEPWHSDIFEFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLP 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ +G EFE LY +YE EGR + I A+KLW+ IL +Q ETGTP+ML+KD+CN+K+NQ+NL
Sbjct: 361 EVYGDEFEALYEKYEREGRGRSTIKAQKLWYAILEAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+SSPEE AVCNLASIALP +V D+ + +
Sbjct: 421 GIIKSSNLCCEIVEYSSPEEVAVCNLASIALPSFVES----------------DNNSTWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L EVTK +T NLN+IID N+YP+ RRSN+R+RPI +G+QGLAD F+ L LPF+S
Sbjct: 465 NFDKLHEVTKTVTGNLNRIIDRNYYPVPEARRSNMRNRPIALGVQGLADAFMALRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ A++AS ELA K+GPYE+Y GSP S+G+LQ D+W+ P++ WDW
Sbjct: 525 QEAKELNIQIFETIYHGAVEASIELAQKEGPYESYEGSPASQGLLQFDLWDRKPTELWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +VN +L
Sbjct: 585 DTLKQKMAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LGLW+ ++K II NGS+ + IP+E+KA+YKTVWEI QK ++DMAADR +
Sbjct: 645 LRDLVDLGLWNDSMKNNIISNNGSIQNLPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQSQSLNIH++ P GKLTS+HFY W KG+KTGMYYLRT+AAA AI+FTVD S
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVDLST 759
>gi|195339753|ref|XP_002036481.1| GM11750 [Drosophila sechellia]
gi|194130361|gb|EDW52404.1| GM11750 [Drosophila sechellia]
Length = 812
Score = 1085 bits (2806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/820 (61%), Positives = 639/820 (77%), Gaps = 29/820 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YVIKRDGR+E V FDKIT+R++KL Y L+ + DPV + +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA +T NHPDYA+LA R+AVSNLHK TK +FS+ +D+YN+ NK + +K LV++
Sbjct: 72 AEIAAGLTCNHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLVSEFH 131
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y ++ KNA L+ +IIYDRDF ++YFGFKTLERSYLLK + ++ ERPQHMLMRV++GIH
Sbjct: 132 YNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ +FTHA+PTLF A T +PQLSSCFLL M DSIEGI+ ++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA G+ I GTNG+SNG+VPML+VFN+ ARYVDQGGGKR GAFAIY
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+FEFL+L+KN GKEE RARDLFYALW+PDLFM+RV +G WSL CP GL
Sbjct: 312 LEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLH 371
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY +YE+EGRA + A+ LWF I+ +Q+ETG PYMLFKD+CNRKSNQQN+
Sbjct: 372 EVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+SSP+E AVCNLASIAL +V + + +
Sbjct: 432 GTIKCSNLCTEIVEYSSPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTKI+T+NLNKIID+N+YP+ R+SNLRHRP+GIGIQG AD IL+ P+ES
Sbjct: 473 DFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMRFPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA LN+ IFETIYY AL+AS ELA +G YETY GSP+SKGILQ DMW+ P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYYGALEASCELAQTEGAYETYEGSPVSKGILQYDMWDKVPTNLWDW 592
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I K+GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIYTRRVLSGEF VVN HL
Sbjct: 593 QKLKESIKKHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLTEL LW +K +II GS+ I IP++++ +YKTVWEI K+ + MAADRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIETIPQKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS----VL 776
IDQSQS NIH+ +P++GKLTS+HFY+W G+KTGMYYLRT+ AA+AI+FTV+ +
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKQGAVSM 772
Query: 777 NNEKA------NRADNDVEANLAQVVCSLKNQEECMACGS 810
N + + + D E +A +VCSL+N++ CM+CGS
Sbjct: 773 NGQNGTAEGSPQKYEEDRERKMADMVCSLENKDACMSCGS 812
>gi|225011000|ref|ZP_03701466.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacteria
bacterium MS024-3C]
gi|225004907|gb|EEG42863.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacteria
bacterium MS024-3C]
Length = 827
Score = 1085 bits (2806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/778 (64%), Positives = 627/778 (80%), Gaps = 24/778 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDG+ EP+ FDKITAR++KL YGL+ E DPV V+ +V G+Y GVTT++LD LA
Sbjct: 1 MYVLKRDGKNEPMMFDKITARVRKLCYGLN-ERVDPVKVSLRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT HPD+A LA R++VSNLHK TK SFSET++D+Y Y N R+GK + L++D+V
Sbjct: 60 AEIAATMTTTHPDFAKLAARISVSNLHKNTKKSFSETMEDLYKYVNPRNGKSSPLLSDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ IM NA LD IIY+RDF +DYFGFKTLERSYLLK++ ++VERPQHMLMRVSVGIH
Sbjct: 120 YQAIMDNAELLDSTIIYNRDFGYDYFGFKTLERSYLLKLNGKIVERPQHMLMRVSVGIHP 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL MKDDSI+GIYDTLK+ A
Sbjct: 180 TDMDSAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLAMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNG+VPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGVVPMLKVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FLDL+KN GKEE RARDLFYA+W+PDLFM+RV + +W+L CP++ L
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWIPDLFMKRVEANAEWTLMCPNECPNLF 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
++ F+ LY +YE EG+ + I AR+LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 NNHSEAFDELYLKYESEGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLASIALP +V++ F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFVKDGA--------------------F 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +VTK +T+NLNK+ID N+YP++ SN+RHRPIG+G+QGLAD FI+L LPF S
Sbjct: 460 DHKELFKVTKRVTKNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA++LN++IFET+Y+ AL AS E A DGPY++Y GSP+S+G Q ++W I S R
Sbjct: 520 DEAKKLNEEIFETLYFAALTASMEEAKADGPYQSYKGSPISQGEFQHNLWGIKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+ LR+ + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWAKLRKDVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL LGLW LK +++ NGSV I IP+++K +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVALGLWDEGLKQELMRANGSVQHIDIIPQDIKELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
G +IDQSQSLN+ ME ++ KLTS+HFYAW G+KTGMYYLRT+AA DAIKFT+D +
Sbjct: 700 GYFIDQSQSLNLFMENANYSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLDNTA 757
>gi|423315656|ref|ZP_17293561.1| ribonucleoside-diphosphate reductase, alpha subunit [Bergeyella
zoohelcum ATCC 43767]
gi|405585760|gb|EKB59563.1| ribonucleoside-diphosphate reductase, alpha subunit [Bergeyella
zoohelcum ATCC 43767]
Length = 777
Score = 1085 bits (2806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/810 (63%), Positives = 641/810 (79%), Gaps = 33/810 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G+KE V FDKITAR+ KL YGLS D + +A+KV G+Y VTTT+LD LA
Sbjct: 1 MFVIKRNGKKEAVHFDKITARIHKLIYGLSISEKDVIEIAKKVIQGIYDNVTTTELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAA T HPD+++LA R+AVSNLHK T SFS+T + +Y Y + + A L+++++
Sbjct: 61 AETAAAQTTIHPDFSVLAARIAVSNLHKNTLKSFSKTAQLLYEYTDPITQTHAPLISEEI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II KNA LD ++IYDRD++FDYFGFKTLERSYL++ + +V ERPQH+ MRV++GIHK
Sbjct: 121 YKIIRKNADELDSSVIYDRDYNFDYFGFKTLERSYLIRTNGKVTERPQHLFMRVALGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +A++TY+LMS+ WF HATPTLFNAGTP+PQ+SSCFLL M +DSI GI+DTLK+CA+
Sbjct: 181 EDIQAAIETYNLMSEKWFIHATPTLFNAGTPKPQMSSCFLLSMTEDSIAGIFDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIG+SIHNIR++GSYI GT G SNGI+PML+VFNDTARYVDQGGGKRKGA A+Y
Sbjct: 241 ISQSAGGIGVSIHNIRSTGSYIKGTGGISNGIIPMLRVFNDTARYVDQGGGKRKGAIAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+DIF+F+D+RKN GKEE RARDLF ALW+ DLFM+RV D WSLF P++A GL
Sbjct: 301 IEPWHSDIFDFIDIRKNHGKEEMRARDLFPALWISDLFMQRVEADQMWSLFDPNEAQGLY 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ +G +F LY+ YE EG+ + I AR+LW IL +QIETGTPYM +KD+ N KSNQ+N+
Sbjct: 361 EVYGEKFNELYTTYENEGKFRKQIKARELWTAILEAQIETGTPYMCYKDAVNEKSNQKNI 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+++ +E AVCNLAS+ALPRYV +KG F
Sbjct: 421 GTIRSSNLCTEIMEYTNADEVAVCNLASLALPRYVSDKG--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTKI+T NLNKIID N+YPI T+ SN RHRPIG+G+QGLAD F+LL LPFES
Sbjct: 461 DFQKLYEVTKIVTRNLNKIIDGNYYPIPETKTSNDRHRPIGLGVQGLADVFLLLRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A++LNKDIFETIY+ +++AS ELA + G Y ++ GSP+S+G Q D+W + PSDRWDW
Sbjct: 521 EAARKLNKDIFETIYFASMEASMELAKEQGAYSSFAGSPLSEGKFQFDLWQVAPSDRWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LR + +GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVLSGEF+VVNK L
Sbjct: 581 EKLRNEVMTHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEFVVVNKFL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ELGLW+ +K K+I ENGSV I EIP ELK +YKTVWEIKQKT++DMAA+RG +
Sbjct: 641 LKDLIELGLWNPTMKNKLIAENGSVQNIPEIPTELKELYKTVWEIKQKTIIDMAAERGAF 700
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
I QSQSLN+ M +P+ KLTS+HF+AW G+KTGMYYLRT+AA DAIKFTVDT +L+ +
Sbjct: 701 ICQSQSLNLFMAEPNFAKLTSMHFHAWKSGLKTGMYYLRTKAAVDAIKFTVDTQILSGQ- 759
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+QV CSL N EEC+ACGS
Sbjct: 760 ------------SQVACSLDNPEECLACGS 777
>gi|363582864|ref|ZP_09315674.1| ribonucleoside-diphosphate reductase large chain [Flavobacteriaceae
bacterium HQM9]
Length = 814
Score = 1085 bits (2806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/835 (62%), Positives = 644/835 (77%), Gaps = 46/835 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGRKEP+ FDKITAR++++ YGL+ E DPV VA +V G+Y GVTT++LD LA
Sbjct: 1 MFVVKRDGRKEPIMFDKITARVRQMCYGLN-ELVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MTV HPDYA LA R++VSNLHK TK +FSE IKD+Y Y N R+GK A+L+ADDV
Sbjct: 60 AEIAATMTVAHPDYAQLAARISVSNLHKNTKKTFSEVIKDLYEYVNPRTGKGAALIADDV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+++M+N LD IIY+RDF +DYFGFKTLERSYLLK++ + ERPQHMLMRVS+GIH
Sbjct: 120 YKVVMENKEKLDSTIIYNRDFSYDYFGFKTLERSYLLKINGNIAERPQHMLMRVSIGIHV 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD D+A++TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL M+DDSI+GIYDTLK+ A
Sbjct: 180 DDLDAAIETYELMSKKFFTHATPTLFNSGTPKPQMSSCFLLTMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYISGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FL+LRKN GKEE RARDLFYA+W+ DLFM+RV D W+L CP + GL
Sbjct: 300 MEPWHADIFDFLELRKNHGKEEMRARDLFYAMWISDLFMKRVEADEDWTLMCPHECPGLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D EFE LY++YE EG+ + + AR +W ++L SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 DVHSEEFESLYTRYEAEGKGRKTVKARDVWEKVLESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLASIALP +V+ G + F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEIAVCNLASIALPMFVK--------------GGK------F 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +VTK +T+NLNK+ID N+YP++ SN+RHRP+G+GIQGLADTFI+L +PF S
Sbjct: 460 DHDELYKVTKRVTKNLNKVIDRNYYPVKQAENSNMRHRPVGLGIQGLADTFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA++LN++IFET+Y+ A+ AS ELA +G YE+Y GSP+S+G Q ++W I S R
Sbjct: 520 DEAKKLNEEIFETMYFAAVTASNELAEVEGTYESYEGSPISEGKFQFNLWGIKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+ LR+ I K+GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWNELRKKIKKSGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL DL ELG+W+ LK I+ NGS+ I +P+ELK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLHDLVELGMWNDDLKDAIMRANGSIQNIEGMPQELKDLYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFT------- 770
G +IDQSQSLN+ ME KLTS+HFYAW G+KTGMYYLRT++A DAIKFT
Sbjct: 700 GYFIDQSQSLNLFMEGATMSKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLKTNSEV 759
Query: 771 --------VDTSVLNNEKANRADNDVEANLA-----QVVCSLKNQE--ECMACGS 810
VD S+ +K A E +L+ ++ K E +C+ CGS
Sbjct: 760 EKPSVDASVDASLPKAKKVKVAPVSTEGSLSPDELRNIIAQSKAGEGDDCLMCGS 814
>gi|17352481|ref|NP_477027.1| ribonucleoside diphosphate reductase large subunit [Drosophila
melanogaster]
gi|12644286|sp|P48591.2|RIR1_DROME RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase
subunit M1; AltName: Full=Ribonucleotide reductase large
subunit
gi|4928448|gb|AAD33590.1|AF132143_1 ribonucleoside reductase M1 subunit [Drosophila melanogaster]
gi|21430662|gb|AAM51009.1| RE58177p [Drosophila melanogaster]
gi|22946135|gb|AAF52913.2| ribonucleoside diphosphate reductase large subunit [Drosophila
melanogaster]
gi|220942628|gb|ACL83857.1| RnrL-PA [synthetic construct]
Length = 812
Score = 1085 bits (2805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/820 (61%), Positives = 638/820 (77%), Gaps = 29/820 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YVIKRDGR+E V FDKIT+R++KL Y L+ + DPV + +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA +T NHPDYA+LA R+AVSNLHK TK +FS+ +D+YN+ NK + +K LV++
Sbjct: 72 AEIAAGLTCNHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLVSEFH 131
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y ++ KNA L+ +IIYDRDF ++YFGFKTLERSYLLK + ++ ERPQHMLMRV++GIH
Sbjct: 132 YNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ +FTHA+PTLF A T +PQLSSCFLL M DSIEGI+ ++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA G+ I GTNG+SNG+VPML+VFN+ ARYVDQGGGKR GAFAIY
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+FEFL+L+KN GKEE RARDLFYALW+PDLFM+RV +G WSL CP GL
Sbjct: 312 LEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLH 371
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY +YE+EGRA + A+ LWF I+ +Q+ETG PYMLFKD+CNRKSNQQN+
Sbjct: 372 DVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+S+P+E AVCNLASIAL +V + + +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTKI+T+NLNKIID+N+YP+ R+SNLRHRP+GIGIQG AD IL+ P+ES
Sbjct: 473 DFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMRFPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA LN+ IFETIYY AL+AS ELA +GPYETY GSP+SKGILQ DMW+ P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPTNLWDW 592
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I +GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIYTRRVLSGEF VVN HL
Sbjct: 593 QKLKESIRMHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLTEL LW +K +II GS+ I IP +++ +YKTVWEI K+ + MAADRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIETIPPKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS----VL 776
IDQSQS NIH+ +P++GKLTS+HFY+W G+KTGMYYLRT+ AA+AI+FTV+ +
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKQGAVSM 772
Query: 777 NNEKA------NRADNDVEANLAQVVCSLKNQEECMACGS 810
N + + + D E +A +VCSL+N++ CM+CGS
Sbjct: 773 NGQNGTAEGSPQKYEEDRERKMADMVCSLENKDACMSCGS 812
>gi|374596273|ref|ZP_09669277.1| ribonucleoside-diphosphate reductase, alpha subunit [Gillisia
limnaea DSM 15749]
gi|373870912|gb|EHQ02910.1| ribonucleoside-diphosphate reductase, alpha subunit [Gillisia
limnaea DSM 15749]
Length = 813
Score = 1085 bits (2805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/774 (64%), Positives = 625/774 (80%), Gaps = 24/774 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDG KEPV FDKITAR++KL YGL+ E DP+ VA +V G+Y+GVTT++LD LA
Sbjct: 1 MYVLKRDGHKEPVMFDKITARIRKLCYGLN-ERVDPLKVAMRVIEGLYEGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE +A MT +HPDYA LA R++VSNLHK TK +FSE + D+Y Y N R+GKKA L+AD+V
Sbjct: 60 AEVSATMTTSHPDYAKLAARISVSNLHKNTKKNFSEVMTDLYEYVNPRTGKKAPLLADEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++I +N LD IIY+RDF++DYFGFKTLERSYLLK++ + ERPQHMLMRVSVGIH
Sbjct: 120 FKVIQENKELLDSTIIYNRDFNYDYFGFKTLERSYLLKLNGEIAERPQHMLMRVSVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +SA++TY LMS+ +FTHATPTLFNAGTP+PQ+SSCFLL MKDDSI+GIYDTLK+ A
Sbjct: 180 NDIESAIETYELMSKKYFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FLDL+KN GKEE RARDLFYA+W+PDLFM+RV +D KW+L CP++ L
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWIPDLFMKRVEEDAKWTLMCPNECPNLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ G EF+ LY +YE EG+ + I AR+LW +IL SQIETGTPYML+KD+ NRKSNQQNL
Sbjct: 360 NIHGDEFDALYLKYESEGKGRKTIRARELWEKILESQIETGTPYMLYKDAANRKSNQQNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+EF+SP+E AVCNLASIALP ++ K + F
Sbjct: 420 GTIRSSNLCTEIMEFTSPDEIAVCNLASIALPMFI--------------------KGKEF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L ++TK +T NLN++ID N+YP++ SN+RHRPIG+G+QGLADTFI L +PF S
Sbjct: 460 DHKELFKITKRVTRNLNRVIDRNYYPVKEAENSNMRHRPIGLGVQGLADTFIKLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA++LN++IFET+Y+ A+ AS ELA ++GPY T+ GSP+SKG Q ++W + S R
Sbjct: 520 EEAKKLNQEIFETLYFAAVTASMELAQEEGPYSTFKGSPISKGQFQHNLWGVEDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+ LR+ + KNGVRNSLLVAPMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWAKLRKQVVKNGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL DL EL LW+ +K I+ NGSV I IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLDDLVELNLWTDDVKDAIMRANGSVQDIDVIPQDLKELYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
G +IDQSQSLN+ ME ++ KLTS+HFY W G+KTGMYYLRT++A DAIKFT+
Sbjct: 700 GYFIDQSQSLNLFMENANYSKLTSMHFYGWKSGLKTGMYYLRTKSAVDAIKFTL 753
>gi|365765120|gb|EHN06634.1| Rnr3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 885
Score = 1085 bits (2805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/775 (63%), Positives = 621/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPV+FDKIT+R+ +LSYGL D V V Q++ +GVY GVTT +LD LA
Sbjct: 17 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 76
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ I+D++++ N +GK A +++D++
Sbjct: 77 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 136
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ V ERPQH++MRV++GIH
Sbjct: 137 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 196
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +S LKTY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 197 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 256
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+GL I+NIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA++
Sbjct: 257 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 316
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RK GKEE RARDLF ALW+PDLFM+RV++DG W+LF PS A GL
Sbjct: 317 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSAAPGLD 376
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EGR K I A+KLW+ IL +Q ETGTP+M++KD+CNRK+NQQNL
Sbjct: 377 DVWGDEFEELYTRYEREGRGK-TIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 435
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+SSP+ETAVCNLASIALP +V S D K +
Sbjct: 436 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 481
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FERL E+ K+IT NLN++ID N+YP+ R SN++HRPI +G+QGLADT+++L LPFES
Sbjct: 482 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 541
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
AQ LNK IFETIY+ L+AS ELA K+G Y T+ GSP SKGILQ DMWN P WDW
Sbjct: 542 EXAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 601
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 602 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 661
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W ++K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 662 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 721
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQS SLN+ ++ P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V
Sbjct: 722 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 776
>gi|255724148|ref|XP_002547003.1| ribonucleoside-diphosphate reductase large chain [Candida
tropicalis MYA-3404]
gi|240134894|gb|EER34448.1| ribonucleoside-diphosphate reductase large chain [Candida
tropicalis MYA-3404]
Length = 865
Score = 1085 bits (2805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/775 (62%), Positives = 629/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPVRFDKITAR+++L YGL H +PV + QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRKEPVRFDKITARVQRLCYGLDPNHVEPVAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT HPDYA+LA R+AVSNLHK T +S+ + +Y Y N ++G + +++ +
Sbjct: 61 AEIAATMTTVHPDYAVLAARIAVSNLHKQTTKQYSKVSQALYEYVNPKTGLHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+IIM++ L+ AI+YDRDF+++YFGFKT+ERSYLL+++ +V ERPQH++MRV++GIH
Sbjct: 121 YDIIMEHEDELNSAIVYDRDFNYNYFGFKTMERSYLLRINGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++TY+LMSQ +FTH +P LFNAGTP+PQ+SSCFLL MKDDSIEGIYDTLK CA+
Sbjct: 181 KDIPRVIETYNLMSQRYFTHGSPCLFNAGTPRPQMSSCFLLAMKDDSIEGIYDTLKSCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIR++G+YI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV +G W+LF P++A GL+
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+E R + I A+KLW+ IL++Q ETGTP+ML+KD+CN K+NQ+NL
Sbjct: 361 DVYGDEFEELYTRYEKENRGRQTIKAQKLWYAILSAQTETGTPFMLYKDACNTKTNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+E AVCNLASIALP +V D N +
Sbjct: 421 GVIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFVE----------------HDESNTWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FE+L EVTK++T NLN++ID N+YP+ RSN+RHRPI +G+QGLAD F+ L LPF+S
Sbjct: 465 NFEKLHEVTKVVTRNLNRVIDRNYYPVPEAERSNMRHRPIALGVQGLADAFMSLRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ A+++S ELA ++G YE+Y GSP S+G+LQ D+WN P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVESSIELAAEEGVYESYPGSPASQGLLQFDLWNRKPTELWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +VN +L
Sbjct: 585 DTLKQKMAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LG+W+ A+K+ II NGS+ + IP+E+KA+YKTVWEI QK ++DMAADR +
Sbjct: 645 LKDLVDLGIWNDAMKSNIISNNGSIQGLPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQSQSLNIH++ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKLV 759
>gi|323337188|gb|EGA78442.1| Rnr3p [Saccharomyces cerevisiae Vin13]
Length = 885
Score = 1084 bits (2804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/775 (63%), Positives = 621/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPV+FDKIT+R+ +LSYGL D V V Q++ +GVY GVTT +LD LA
Sbjct: 17 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 76
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ I+D++++ N +GK A +++D++
Sbjct: 77 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 136
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ V ERPQH++MRV++GIH
Sbjct: 137 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 196
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +S LKTY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 197 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 256
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+GL I+NIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA++
Sbjct: 257 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 316
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RK GKEE RARDLF ALW+PDLFM+RV++DG W+LF PS A GL
Sbjct: 317 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSAAPGLD 376
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EGR K I A+KLW+ IL +Q ETGTP+M++KD+CNRK+NQQNL
Sbjct: 377 DVWGDEFEELYTRYEREGRGK-TIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 435
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+SSP+ETAVCNLASIALP +V S D K +
Sbjct: 436 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 481
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FERL E+ K+IT NLN++ID N+YP+ R SN++HRPI +G+QGLADT+++L LPFES
Sbjct: 482 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 541
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
AQ LNK IFETIY+ L+AS ELA K+G Y T+ GSP SKGILQ DMWN P WDW
Sbjct: 542 EXAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 601
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 602 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 661
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W ++K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 662 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 721
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQS SLN+ ++ P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V
Sbjct: 722 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 776
>gi|351702964|gb|EHB05883.1| Ribonucleoside-diphosphate reductase large subunit, partial
[Heterocephalus glaber]
Length = 787
Score = 1084 bits (2804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/806 (64%), Positives = 643/806 (79%), Gaps = 21/806 (2%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LAAETAA
Sbjct: 1 DGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLAAETAAT 60
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
+T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +G+ + +VA +I++
Sbjct: 61 LTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVAKSTLDIVLA 120
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSA 186
N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK+D D+A
Sbjct: 121 NKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAA 180
Query: 187 LKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAG 246
++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+ISKSAG
Sbjct: 181 IETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAG 240
Query: 247 GIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHA 306
GIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIYLEPWH
Sbjct: 241 GIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHL 300
Query: 307 DIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIE 366
DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL + WG E
Sbjct: 301 DIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEE 360
Query: 367 FEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD-SCNRKSNQQNLGTIKS 425
FE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KD S N+KSNQQNLGTIK
Sbjct: 361 FEKLYESYEKQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKDYSYNQKSNQQNLGTIKC 420
Query: 426 SNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERL 485
SNLCTEIVE++S +E AVCNLAS+AL YV + +DF++L
Sbjct: 421 SNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTYDFKKL 461
Query: 486 AEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQ 545
AEVTK+I NLNKIID+N+YPI SN HRPIGIG+QGLAD FIL+ PFESPEAQ
Sbjct: 462 AEVTKVIVRNLNKIIDINYYPIPEAHLSNKCHRPIGIGVQGLADAFILMRYPFESPEAQL 521
Query: 546 LNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLRE 605
LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW L+E
Sbjct: 522 LNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKLLKE 581
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLT 665
I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HLLKDLT
Sbjct: 582 KIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLT 641
Query: 666 ELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQ 725
E GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAADRG +IDQSQ
Sbjct: 642 ERGLWNEEMKNQIIACNGSIQSILEIPDDLKQLYKTVWEISQKTVLKMAADRGAFIDQSQ 701
Query: 726 SLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRAD 785
SLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++ +
Sbjct: 702 SLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKEKASKE 761
Query: 786 NDVEA-NLAQVVCSLKNQEECMACGS 810
+ + N A +VCSL+N++EC+ CGS
Sbjct: 762 EEEKERNTAAMVCSLENRDECLMCGS 787
>gi|403218291|emb|CCK72782.1| hypothetical protein KNAG_0L01620 [Kazachstania naganishii CBS
8797]
Length = 904
Score = 1084 bits (2804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/787 (62%), Positives = 630/787 (80%), Gaps = 15/787 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPV+FDKITAR+ +L YGL + D V V Q++ +GVY+GVTT++LD LA
Sbjct: 1 MYVIKRDGRKEPVKFDKITARISRLCYGLDPQRIDAVKVTQRIISGVYEGVTTSELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA RVA+SNLHK T FS+ + D+++Y N +GK A +++D+V
Sbjct: 61 AETCAYMTTVHPDYATLAARVAISNLHKQTTKQFSQVVADLHDYINPATGKHAPMISDEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++I+MKN ++ AI+YDRDF F+YFGFKTLERSYLL+++ +V ERPQH++MRV++GIH
Sbjct: 121 FDIVMKNKDAINSAIVYDRDFQFNYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +S +TY+LMS +F HA+PTLFNAGTP+PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 NDLESVFETYNLMSLRYFLHASPTLFNAGTPKPQMSSCFLVAMKDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV + W+LF PS A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEANEDWTLFSPSSAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE EGR K I A+KLW+ IL +Q ETGTP+M++KD+CN+KSNQ+NL
Sbjct: 361 DIYGDEFEALYTKYEREGRGK-TIKAQKLWYSILEAQTETGTPFMIYKDACNQKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+S P ETAVCNLAS+ALP ++ S D + +
Sbjct: 420 GTIKSSNLCCEIVEYSDPNETAVCNLASVALPAFIET--------------SEDGTSSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+ K+IT NLNK+ID N+YP+ RRSN+RHRPI +G+QGLADTF+LL LPFES
Sbjct: 466 NFKKLHEIAKVITRNLNKVIDRNYYPVPEARRSNMRHRPIALGVQGLADTFMLLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+ LN+ IFETIY+ +L+AS ELA KDG YET+ SP ++G+LQ+DMWN P WDW
Sbjct: 526 PEARLLNEQIFETIYHASLEASCELAQKDGTYETFKTSPSAQGVLQMDMWNAKPYGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y RRVLSGEF VVN +L
Sbjct: 586 DTLRDDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYQRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W+ ++K +I NGS+ + IP+ELK +YKTVWEI QK +++MAADR Y
Sbjct: 646 LRDLVDLGIWNESMKQHLITANGSIQSLPNIPQELKDLYKTVWEISQKQIINMAADRSIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS S+N+ ++ P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D +V +
Sbjct: 706 IDQSHSMNLFLQAPTMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQNVADQAG 765
Query: 781 ANRADND 787
AD D
Sbjct: 766 TTIADMD 772
>gi|190406283|gb|EDV09550.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a]
gi|256269776|gb|EEU05042.1| Rnr3p [Saccharomyces cerevisiae JAY291]
Length = 869
Score = 1084 bits (2803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/775 (63%), Positives = 621/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPV+FDKIT+R+ +LSYGL D V V Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ I+D++++ N +GK A +++D++
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +S LKTY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+GL I+NIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RK GKEE RARDLF ALW+PDLFM+RV++DG W+LF PS A GL
Sbjct: 301 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSAAPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EGR K I A+KLW+ IL +Q ETGTP+M++KD+CNRK+NQQNL
Sbjct: 361 DVWGDEFEELYTRYEREGRGK-TIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+SSP+ETAVCNLASIALP +V S D K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FERL E+ K+IT NLN++ID N+YP+ R SN++HRPI +G+QGLADT+++L LPFES
Sbjct: 466 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
AQ LNK IFETIY+ L+AS ELA K+G Y T+ GSP SKGILQ DMWN P WDW
Sbjct: 526 EVAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W ++K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQS SLN+ ++ P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 760
>gi|332876815|ref|ZP_08444572.1| ribonucleoside-diphosphate reductase, alpha subunit [Capnocytophaga
sp. oral taxon 329 str. F0087]
gi|332685241|gb|EGJ58081.1| ribonucleoside-diphosphate reductase, alpha subunit [Capnocytophaga
sp. oral taxon 329 str. F0087]
Length = 777
Score = 1083 bits (2802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/810 (63%), Positives = 641/810 (79%), Gaps = 33/810 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G+KE V FDKITAR+ KL YGLS D + +A+KV G+Y +TTT+LD LA
Sbjct: 1 MFVIKRNGKKEAVHFDKITARIHKLIYGLSISEKDVIEIAKKVIQGIYDNITTTELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAA T HPD+++LA R+AVSNLHK T SFS+T + +Y Y + + A L+++++
Sbjct: 61 AETAAAQTTIHPDFSVLAARIAVSNLHKNTLKSFSKTAQLLYEYTDPITQTHAPLISEEI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II KNA LD ++IYDRD++FDYFGFKTLERSYL++ + +V ERPQH+ MRV++GI+K
Sbjct: 121 YKIIRKNADELDSSVIYDRDYNFDYFGFKTLERSYLIRTNGKVTERPQHLFMRVALGIYK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +A++TY+LMS+ WF HATPTLFNAGTP+PQ+SSCFLL M +DSI GI+DTLK+CA+
Sbjct: 181 EDIQAAIETYNLMSEKWFIHATPTLFNAGTPKPQMSSCFLLSMTEDSIAGIFDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIG+SIHNIR++GSYI GT G SNGI+PML+VFNDTARYVDQGGGKRKGA A+Y
Sbjct: 241 ISQSAGGIGVSIHNIRSTGSYIKGTGGISNGIIPMLRVFNDTARYVDQGGGKRKGAIAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH DIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV D WSLF P++A GL
Sbjct: 301 IEPWHLDIFDFIDIRKNHGKEEMRARDLFPALWIPDLFMQRVEADQMWSLFDPNEAQGLY 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ +G +F LY+ YE EG+ + I AR+LW IL +QIETGTPYM +KD+ N KSNQ+N+
Sbjct: 361 EVYGEKFNELYTTYENEGKFRKQIKARELWTAILEAQIETGTPYMCYKDAVNEKSNQKNI 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+++ +E AVCNLAS+ALPRYV G F
Sbjct: 421 GTIRSSNLCTEIMEYTNADEVAVCNLASLALPRYVSSGG--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTKI+T NLNKIID N+YPI T+ SN RHRPIG+G+QGLAD F+LL LPFES
Sbjct: 461 DFQKLYEVTKIVTRNLNKIIDGNYYPIPETKTSNDRHRPIGLGVQGLADVFLLLRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LNKDIFETIY+ +++AS +LA + G Y ++ GSP+S+G Q D+W + PSDRWDW
Sbjct: 521 PEARRLNKDIFETIYFASMEASMDLAKEQGAYSSFAGSPLSEGKFQFDLWQVVPSDRWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LR+ + +GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVLSGEF+VVNK L
Sbjct: 581 EKLRQEVMTHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEFVVVNKFL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL ELGLW+ +K K+I ENGSV I EIP ELK +YKTVWEIKQKT++DMAA+RG +
Sbjct: 641 LKDLIELGLWNPTMKNKLIAENGSVQNIPEIPTELKELYKTVWEIKQKTIIDMAAERGAF 700
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
I QSQSLN+ M +P+ KLTS+HF+AW G+KTGMYYLRT+AA DAIKFTVDT +L +
Sbjct: 701 ICQSQSLNLFMAEPNLAKLTSMHFHAWKSGLKTGMYYLRTKAAVDAIKFTVDTQLLLGQ- 759
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+QV CSL N EEC+ACGS
Sbjct: 760 ------------SQVACSLDNPEECLACGS 777
>gi|268573646|ref|XP_002641800.1| C. briggsae CBR-RNR-1 protein [Caenorhabditis briggsae]
Length = 790
Score = 1083 bits (2802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/807 (62%), Positives = 635/807 (78%), Gaps = 26/807 (3%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV+KRDGR E V FDKIT+R++KLSYGL+ + DPV VA KV +G+YKGVTT +LD LAA
Sbjct: 8 YVVKRDGRMENVHFDKITSRIQKLSYGLNMDFVDPVAVAIKVISGLYKGVTTVELDNLAA 67
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA+MT HP+YALLA R+AVSNLHK T FSE +K ++ +++ +GK A +++D+ +
Sbjct: 68 ETAASMTTQHPEYALLAARIAVSNLHKKTNKVFSEVMKTLHEFHHPHTGKHAPMISDETW 127
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
EII KNA L+ AI+YDRD+ + YFGFKTLERSYLLK++ VVERPQ MLMRV++GIH
Sbjct: 128 EIIQKNADKLNSAIVYDRDYSYTYFGFKTLERSYLLKINKEVVERPQQMLMRVAIGIHGK 187
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D +A++TY+LMS+ + THA+PTLFN+GT +PQ+SSCFLL M +DSI GIYDTLK+CA+I
Sbjct: 188 DISAAIETYNLMSERYMTHASPTLFNSGTCRPQMSSCFLLTMSEDSILGIYDTLKQCALI 247
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKSAGGIGL++H IRA+GS I GTNG+SNG++PML+V+N+TARYVDQGG KR GAFAIYL
Sbjct: 248 SKSAGGIGLNVHKIRATGSVIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIYL 307
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHADIFEF+ LRKN G EE RARDLF ALWVPDLFM+RV D WSL CP + GL D
Sbjct: 308 EPWHADIFEFVALRKNTGPEEERARDLFLALWVPDLFMKRVEKDQDWSLMCPCECPGLDD 367
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EFE LY++YE EGR + + ARKLW I+++QIETG PY+ +KD+ NRKSNQQNLG
Sbjct: 368 CWGEEFETLYAKYEAEGRVRKTVKARKLWEHIVSNQIETGLPYITYKDAANRKSNQQNLG 427
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIK SNLCTEI+E+S+P+E AVCNLASIAL R+V + ++ FD
Sbjct: 428 TIKCSNLCTEIIEYSAPDEVAVCNLASIALNRFV-------------------TNDKKFD 468
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F +LAEVTK+IT+NLNKIIDVN+YPIE R SN+RHRPIG+G+QGLAD F+L+ PF SP
Sbjct: 469 FVKLAEVTKVITKNLNKIIDVNYYPIEEARNSNMRHRPIGLGVQGLADCFMLMRYPFTSP 528
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
+A+ LNK IFETIYY AL+AS ELA +DGPY TY GSP+SKG LQ DMW +TP+++ +W
Sbjct: 529 QARDLNKRIFETIYYAALEASCELAERDGPYSTYEGSPVSKGQLQFDMWGVTPTNQCNWD 588
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
LR+ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSG+F +VN H+L
Sbjct: 589 ELRKKIAKHGVRNSLLMAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQIVNPHML 648
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
KDL E GLW+ +K ++I NGS+ I IP+++K +Y TVWEI QK +++MAADRG +I
Sbjct: 649 KDLVERGLWTDEMKNRLIANNGSIQNIPGIPDDIKELYLTVWEISQKEIIEMAADRGAFI 708
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
DQSQSLNIHM +P + +TS+HFY W KG+KTGMYYLRT+ A +A++FTVD + L +
Sbjct: 709 DQSQSLNIHMAKPSYAAITSMHFYGWKKGLKTGMYYLRTKPAVNAVQFTVDKAALQQKNV 768
Query: 782 NRADNDVEANLAQVVCSLKNQEECMAC 808
+A++ V + AQ E C+ C
Sbjct: 769 QKAESRVASPEAQ-------DEGCLMC 788
>gi|344234166|gb|EGV66036.1| ribonucleoside-diphosphate reductase large chain 1 [Candida tenuis
ATCC 10573]
Length = 863
Score = 1083 bits (2802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/772 (62%), Positives = 628/772 (81%), Gaps = 16/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KR G KEPVRFDKITAR+++L YGL +H D V + Q+V +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRGGHKEPVRFDKITARVQRLCYGLDTKHVDAVAITQRVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T +S+ K++Y+Y N ++GK + +++D+
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQYSQVSKELYDYINPKTGKHSPMISDET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y +I K+A L+ AI+YDRDF+++YFGFKTLERSYLL++D +V ERPQH++MRV+VGIH
Sbjct: 121 YAVIQKHADELNSAIVYDRDFNYNYFGFKTLERSYLLRIDGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+ MSQ +FTH +PTLFNAGTP PQ+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 DDIERVIETYNYMSQRYFTHGSPTLFNAGTPSPQMSSCFLVAMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIR++G+YI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFMERV +G W+LF P++A GLA
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMERVEANGDWTLFSPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ +G EF+ LY +YE E R + I A+KLW+ +L +Q ETGTP+ML+KD+CN K+NQ+NL
Sbjct: 361 EVYGDEFKQLYEKYERENRGRQTIKAQKLWYAVLEAQTETGTPFMLYKDACNLKTNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+S PEE +VCNLASIALP +V D + +
Sbjct: 421 GTIKSSNLCCEIVEYSDPEEVSVCNLASIALPSFVET----------------DETSAWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FE+L +++K++T NLN+IID N+YP+ +RSN+R+RPI +G+QGLAD F+ L LPF+S
Sbjct: 465 NFEKLHDISKVVTRNLNRIIDRNYYPVPEAKRSNMRNRPIALGVQGLADAFMALRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ A++AS ELA +G YE+Y GSP S+G+LQ D+WN P++ WDW
Sbjct: 525 QEAKELNIQIFETIYHGAVEASIELAATEGAYESYPGSPASQGLLQYDLWNRKPTELWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSN+Y+RRVLSGEF +VN +L
Sbjct: 585 DTLKQKMAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNMYSRRVLSGEFQIVNPYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LGLW+ ++K II NGS+ ++ IP+++KA+YKTVWEI QK ++DMAADR +
Sbjct: 645 LKDLVDLGLWNESMKNNIISNNGSIQGLTNIPDQIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQSLNIH++ P GKLTS+HFY W KG+KTGMYYLRT+AAA AI+FT+D
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTID 756
>gi|389740180|gb|EIM81371.1| ribonucleotide reductase alpha subunit [Stereum hirsutum FP-91666
SS1]
Length = 923
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/779 (63%), Positives = 625/779 (80%), Gaps = 20/779 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV KR GRKE V+FDKITAR+ KL YGL H +P VAQKV GVY+GVTT++LD LAA
Sbjct: 17 YVFKRGGRKERVQFDKITARISKLCYGLDNSHIEPAEVAQKVIQGVYQGVTTSELDNLAA 76
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA +T HPDYA+LA R+AVSNLHK TK +FS I D+YNY N ++GK A +++D+ Y
Sbjct: 77 ETAAYLTTKHPDYAILAARIAVSNLHKDTKKNFSHVIADLYNYVNPKTGKAAGMISDETY 136
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
I +NA LD AIIY+RDF++++FGFKTLERSYLLK++ R ERPQHM+MRV+ GIH
Sbjct: 137 RFISENAERLDSAIIYERDFNYNFFGFKTLERSYLLKINGRTAERPQHMIMRVACGIHGH 196
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D + A++TY+LMS+ +FTHA+PTLFNAGTP PQL+SCFL+CMKDDSIEGIYDTLK+CA+I
Sbjct: 197 DVERAIETYNLMSERYFTHASPTLFNAGTPHPQLASCFLVCMKDDSIEGIYDTLKQCAMI 256
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK+AGGIGLSIHNIRA+G+YI GTNG SNGIVPML+ F+ TARYVDQGG KR GAFAIY+
Sbjct: 257 SKTAGGIGLSIHNIRATGAYIAGTNGYSNGIVPMLRAFDATARYVDQGGNKRPGAFAIYI 316
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+FEFLDLRKN GKEE RARDLFYALW+PDLFM+R+ ++G W+LF +A GL +
Sbjct: 317 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRISENGNWTLFSADEAPGLHE 376
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
+G EFE LY +YE+EGR + + A+KLW+ I+++QIETG P+M +KD+ NRKSNQ+NLG
Sbjct: 377 VYGDEFEALYEKYEKEGRGRKTMPAQKLWYAIMDAQIETGGPFMCYKDAANRKSNQKNLG 436
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
IKSSNLCTEI+E+S+P+ETAVCNLAS+ALP ++ N +++
Sbjct: 437 VIKSSNLCTEIMEYSAPDETAVCNLASLALPTFI--------------------DNGIYN 476
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L +V K++T NLN++IDVN+YP+ R SN+RHRPIG+G+QGLAD F++L + F+S
Sbjct: 477 FQKLHDVAKVVTYNLNRVIDVNYYPVPEARNSNMRHRPIGLGVQGLADAFMILRMAFDSD 536
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
A++LN+ IFETIY+ A++AS E+A ++GPYE+Y GSP SKG LQ DMW +TP+D WDW
Sbjct: 537 AARKLNQQIFETIYHAAVEASCEIAEEEGPYESYEGSPASKGELQYDMWGVTPTDLWDWE 596
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
L+ ++++G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYTRRVL+GEF VV LL
Sbjct: 597 ELKAKVAQHGLRNSLLVAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVCPWLL 656
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
++L EL LW +K KII NGS+ I EIP+++KAIYKTVWEI QK ++D+AADRG +I
Sbjct: 657 RELVELKLWDDDMKNKIIAHNGSIQAIPEIPDDVKAIYKTVWEISQKKVLDLAADRGAFI 716
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
QSQSLN+H++ P +LTS+HFY W KG+KTGMYYLRTR AA AI+FT+D ++ K
Sbjct: 717 CQSQSLNVHLQSPTVNQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTLDHKLVEQTK 775
>gi|403215030|emb|CCK69530.1| hypothetical protein KNAG_0C04280 [Kazachstania naganishii CBS
8797]
Length = 845
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/785 (62%), Positives = 627/785 (79%), Gaps = 15/785 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPVRFDKITAR+ +L YGL + DPV+V Q++ +GVY+GV+T +LD LA
Sbjct: 1 MYVIKRDGRKEPVRFDKITARITRLCYGLDPKRVDPVIVTQRIISGVYEGVSTEELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDY LA R+A+SNLHK T FS+ + D+Y+Y N +GK A +++D V
Sbjct: 61 AETAAYMTTIHPDYGTLAARLAISNLHKQTTKLFSQVVSDLYHYVNPANGKHAPMISDKV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+MKN L+ I+YDRDF ++YFGFKTLERSYLL+++ +V ERPQH++MRV++GIH
Sbjct: 121 YDIVMKNKELLNSTIVYDRDFAYNYFGFKTLERSYLLRINGKVAERPQHLVMRVALGIHL 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +S ++TY+LMS +FTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSIEGI+DTLK+CA+
Sbjct: 181 DDLESVVRTYNLMSMRYFTHASPTLFNAGTPRPQMSSCFLIAMKDDSIEGIFDTLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNG++PM++VFN+T+RYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTSRYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV +G W+LF PSDA GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEANGDWTLFSPSDAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG E+E LY +YE EGR K I A KLW+ IL +Q ETGTP+M++KD+CNRKSNQQNL
Sbjct: 361 DVWGEEYEQLYERYEREGRGK-TIKAHKLWYAILEAQTETGTPFMIYKDACNRKSNQQNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+S+P+ETAVCNLASIALP ++ S D K +
Sbjct: 420 GTIKSSNLCCEIVEYSAPDETAVCNLASIALPAFIET--------------SEDGKVSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E++K++T NLN++ID N+YP+ SN+RHRPI +G+QGLADT++LL LPFES
Sbjct: 466 NFDKLHEISKVVTHNLNRVIDNNYYPVPEAENSNMRHRPIALGVQGLADTYMLLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LNK IFETIY+ +L+AS ELA KDG Y ++ G PMSKGI Q+DMW+ P WDW
Sbjct: 526 EEARTLNKQIFETIYHASLEASCELAQKDGTYSSWEGCPMSKGIFQMDMWDAKPFGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I ++G+RNSL +APMPTASTSQI+G NECFEP TSN+Y RRVLSGEF VVN +L
Sbjct: 586 ETLRKDIIEHGLRNSLTMAPMPTASTSQIMGYNECFEPLTSNMYQRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W ++K +I NGS+ + IP+ELK +YKTVWEI QK +++MAADR Y
Sbjct: 646 LRDLVDLGVWDESMKQHLITANGSIQGLPNIPDELKELYKTVWEISQKKILEMAADRSIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLN+ ++ P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V +
Sbjct: 706 IDQSHSLNLFLQAPTMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKVADRAA 765
Query: 781 ANRAD 785
AD
Sbjct: 766 TMVAD 770
>gi|213409966|ref|XP_002175753.1| ribonucleoside-diphosphate reductase large chain
[Schizosaccharomyces japonicus yFS275]
gi|212003800|gb|EEB09460.1| ribonucleoside-diphosphate reductase large chain
[Schizosaccharomyces japonicus yFS275]
Length = 824
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/844 (61%), Positives = 654/844 (77%), Gaps = 54/844 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D V Q+V +GVY GVTT +LD LA
Sbjct: 1 MFVYKRDGRKEKVQFDKITARVSRLCYGLDPEHVDAAAVTQRVISGVYPGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T +FS ++ ++++ N ++GK A +++D+V
Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKQTDKAFSSVVQKLHDWVNPKTGKHAPMISDEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEI+MK+ LD AIIYDRDF ++YFGFKTLERSYLL++D +V ERPQH++MRV+VGIH
Sbjct: 121 YEIVMKHKDELDSAIIYDRDFTYNYFGFKTLERSYLLRIDGKVAERPQHLIMRVAVGIHH 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD ++A++TY+ MSQ +FTHA+PTLFNAGTP+PQLSSCFL+ MKDDSIEGIY+TLK CA+
Sbjct: 181 DDIEAAIETYNYMSQRYFTHASPTLFNAGTPRPQLSSCFLVTMKDDSIEGIYETLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG++IHNIRA+GSYI GTNG+SNGIVPML+VFN+TARYVDQGG KR GAFA Y
Sbjct: 241 ISKTAGGIGINIHNIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAAY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+ +F++LRK GKEE RAR+LFYALW+PDLFM RV + +WS FCP++A GLA
Sbjct: 301 LEPWHPDVLDFVELRKTHGKEEMRARELFYALWIPDLFMRRVEKNEQWSFFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY +YE EGRA+ V+ A+K+W+EI+ +Q ETG P+ML+KDSCNRKSNQ+NL
Sbjct: 361 DVWGEEFEELYERYEREGRARRVLPAQKVWYEIIRAQSETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLCTEIVE+SSP+E AVCNLASIALP ++ D K +
Sbjct: 421 GTIRCSNLCTEIVEYSSPDEVAVCNLASIALPMFI-----------------HDGK---Y 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L V K++T NLN++IDVN+YP+ RRSNLRHRP+G+G+QGLAD F L P+ES
Sbjct: 461 DFQQLHNVAKVVTRNLNRVIDVNYYPVPEARRSNLRHRPVGLGVQGLADAFFKLRYPYES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LN IFETIY+ AL+AS ELA ++GPYETY GSP S+GILQ DMWN+TP+D WDW
Sbjct: 521 PEARKLNLLIFETIYHAALEASCELAAEEGPYETYEGSPASQGILQYDMWNVTPTDLWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+SL+ I+K+G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y RRVLSGEF +VN L
Sbjct: 581 ASLKAKIAKHGLRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LGLW +K K++ +GS+ I EIP++LK +YKTVWEI Q+T++D AADRG +
Sbjct: 641 LRDLVDLGLWDEEMKNKLVLYDGSIQAIPEIPQDLKNLYKTVWEISQRTVIDYAADRGAF 700
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD-------- 772
IDQSQSLNIH++ P GK+TS+HFY W KG+KTGMYYLRT AA+ AIKFTVD
Sbjct: 701 IDQSQSLNIHIKDPSFGKITSMHFYGWKKGLKTGMYYLRTMAASAAIKFTVDPLSVKQTN 760
Query: 773 --------------------TSVLNNEKANR---ADNDVEANLAQ---VVCSLKNQEECM 806
++V NEK N +DN + ++ + CS+KN E C
Sbjct: 761 SASAPSPAPASIRPKSSASVSAVNKNEKENEQNSSDNQEKVDIYNSKVIACSIKNPEACE 820
Query: 807 ACGS 810
C +
Sbjct: 821 MCSA 824
>gi|388855438|emb|CCF50884.1| probable RNR1-ribonucleoside-diphosphate reductase large subunit
[Ustilago hordei]
Length = 892
Score = 1083 bits (2800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/781 (62%), Positives = 625/781 (80%), Gaps = 18/781 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV KRDGRKE V+FDK+TAR+ KL YGL + + DP+ + +KV G+Y+GVTT +LD LA
Sbjct: 2 IYVYKRDGRKEVVKFDKVTARISKLCYGLDQNYVDPIEITRKVIDGIYEGVTTVELDNLA 61
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA T HPDYA+LA R+A+SNLHK T +FS+ ++D+Y Y N ++ + + +++D
Sbjct: 62 AETAAYKTTTHPDYAVLAARIAISNLHKETSKNFSQVVQDLYEYVNPKNRRHSPMISDAT 121
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+++M++ LD AIIY+RDF +++FGFKTLERSYLL+++ +V ERPQHM+MRV+VGIH
Sbjct: 122 YKVVMQHKDQLDSAIIYERDFHYNFFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 181
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +SA++TY+LMSQ +FTHA+PTLFNAGTP PQLSSCFL+ MKDDSI+GIYDTLK CA+
Sbjct: 182 QDIESAIETYNLMSQKYFTHASPTLFNAGTPHPQLSSCFLVTMKDDSIDGIYDTLKTCAM 241
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IR +GSYI GTNG SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 242 ISKTAGGIGLNIHCIRGTGSYIAGTNGVSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 301
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+D+FEFLDLRKN GKEE RAR+LFYALWVPDLFM+RV +G WSL CP++ GLA
Sbjct: 302 IEPWHSDVFEFLDLRKNHGKEEVRARELFYALWVPDLFMKRVEQNGDWSLMCPNECPGLA 361
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EGR K + A+KLW+ IL SQ ETG P++L+KD+ NRKSNQ+NL
Sbjct: 362 DCYGDEFERLYERYEAEGRCKRTVKAQKLWYAILESQTETGNPFILYKDAANRKSNQKNL 421
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI+E+S+P+E AVCNLASIALP ++ D +++
Sbjct: 422 GTIKCSNLCTEIIEYSAPDEVAVCNLASIALPTFI------------------DPVTKVY 463
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF+RL EV K I +NLNKIID+N+YP+E RRSN+RHRPIGIG+QGLAD F+++G FES
Sbjct: 464 DFKRLHEVAKAICKNLNKIIDINYYPVEEARRSNMRHRPIGIGVQGLADAFMIMGYAFES 523
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LN IFETIY+ AL+ S ELA + G YETY GSP S+G LQ DMW +TPSD WDW
Sbjct: 524 PEARRLNVQIFETIYHAALERSCELAQEHGTYETYQGSPASQGELQYDMWGVTPSDLWDW 583
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+SL+ I+K+G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 584 ASLKANIAKHGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 643
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L++L E GLW+ +K +II GS+ + IP+ +K +YKTVWEI QK ++DMAADRG +
Sbjct: 644 LRELVEQGLWNDTMKNRIIAHGGSIQNVPGIPDRIKKLYKTVWEISQKAIIDMAADRGAF 703
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
I QSQSLNIH+ P G+LTS+HFY W KG+KTG YYLRT+ A++A++FT+ + +N K
Sbjct: 704 ICQSQSLNIHLSAPTFGQLTSMHFYGWKKGLKTGTYYLRTKPASNAVQFTLSVAEVNEAK 763
Query: 781 A 781
A
Sbjct: 764 A 764
>gi|223999029|ref|XP_002289187.1| ribonucleotide reductase large chain subunit [Thalassiosira
pseudonana CCMP1335]
gi|220974395|gb|EED92724.1| ribonucleotide reductase large chain subunit [Thalassiosira
pseudonana CCMP1335]
Length = 813
Score = 1083 bits (2800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/826 (59%), Positives = 639/826 (77%), Gaps = 29/826 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDG+K+ +FDKI +R+ KL YGL ++ + +++QKV GVY GVTTT+LDELA
Sbjct: 1 MYVVKRDGKKQSCQFDKIQSRISKLCYGLDQKFVNEAVISQKVIQGVYPGVTTTELDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+TAA+ + HPDYA+LA R+ VSNLHK T+ FS+ ++ YNY + ++G+ A LV+ +V
Sbjct: 61 AQTAASFSTQHPDYAVLAARIEVSNLHKETEKQFSKVVEAFYNYTHPKTGEPAPLVSKEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+++ N LDGA+I+DRDF+FDYFG+KTLE+SYLLK+ + ERPQHMLMRVSVGIH
Sbjct: 121 YDVVNANKDVLDGAVIHDRDFEFDYFGYKTLEKSYLLKLHGEIAERPQHMLMRVSVGIHM 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D + L+TY+L+SQ +FTHATPTLFNAGTP PQ+SSCFL C+K DSI+GIYDTLK CA+
Sbjct: 181 GDIERVLETYNLLSQRFFTHATPTLFNAGTPNPQMSSCFLTCIKADSIDGIYDTLKNCAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+SI N+RAS SYI GTNG+SNGIVPML+VFN+TARYVDQGGGKRKG+ A Y
Sbjct: 241 ISKYAGGIGMSISNVRASASYIRGTNGTSNGIVPMLRVFNNTARYVDQGGGKRKGSIAAY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF FLDLRKN G E RARDLFYALW+PDLFM+RV +G W+L CP++ GL
Sbjct: 301 IEPWHADIFAFLDLRKNHGNEMERARDLFYALWIPDLFMQRVEQNGDWTLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
WG EF+ LY +YE EG+ + I A++LWF +L+SQ+ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 TCWGEEFKTLYEKYEREGKGRKTIKAQQLWFAVLDSQVETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+++P+E AVCNLASI+L ++V P + G F
Sbjct: 421 GTIKCSNLCTEIVEYTAPDEIAVCNLASISLSKFV----TPADN-----FGGEGH----F 467
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D E L ++K++T+NLN++ID N YP+E RRSN+RHRPIGIG+QGLAD F+++ LPFES
Sbjct: 468 DLENLKHISKVVTKNLNRVIDRNFYPVEEARRSNMRHRPIGIGVQGLADAFMMMKLPFES 527
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLNKDIFETIY+ A +AS ELA ++GPYETY GSP SKG LQ DMW + PS+ WDW
Sbjct: 528 PEARQLNKDIFETIYFGACEASMELAEQEGPYETYEGSPASKGQLQFDMWGVEPSNLWDW 587
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+ I+++G+RNSLL+APMPTAST+QILGNNE EP+TSN+Y RRVL+GEF +VNKHL
Sbjct: 588 AGLKAKIAQHGMRNSLLMAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTIVNKHL 647
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L++LT GLW+ ++ +II + GSV +++IP+ ++ +YKTVWEI Q+ ++DMAADRG +
Sbjct: 648 LRELTANGLWTERVRNQIIAQGGSVQAVADIPKSIRDVYKTVWEIPQRAILDMAADRGAF 707
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
I QSQS+N+H+ +P KLTS+HFYAW KG+KTGMYYLRTR ADAI+FTV+ +L
Sbjct: 708 ICQSQSMNVHIGEPSTSKLTSMHFYAWKKGLKTGMYYLRTRPKADAIQFTVNQEMLAEST 767
Query: 781 ANRADNDVEANLAQVVCSLKN----------------QEECMACGS 810
+ A + +E N + + +EEC+ CG+
Sbjct: 768 SKPAQDQLERNPSPTSVTAAGKVSVNSKFAGLQMKDEEEECLNCGA 813
>gi|340617899|ref|YP_004736352.1| ribonucleoside-diphosphate reductase, large subunit [Zobellia
galactanivorans]
gi|339732696|emb|CAZ95964.1| Ribonucleoside-diphosphate reductase, large subunit [Zobellia
galactanivorans]
Length = 828
Score = 1082 bits (2799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/777 (64%), Positives = 624/777 (80%), Gaps = 24/777 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGRKE V FDKITAR++KL YGL+ DP+ VA +V G+Y GVTT++LD LA
Sbjct: 1 MFVIKRDGRKEMVMFDKITARVRKLCYGLNG-LVDPLKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT HPDYA LA R++VSNLHK TK SFSET+KD+Y Y N R+ KKA L++D+V
Sbjct: 60 AEIAATMTTTHPDYAKLAARISVSNLHKNTKKSFSETMKDLYEYVNPRTNKKAPLLSDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I +N+ LD IIY+RDF +DYFGFKTLERSYLLK++ ++ ERPQHMLMRVSVGIH
Sbjct: 120 YKVISENSERLDSTIIYNRDFGYDYFGFKTLERSYLLKINGKIAERPQHMLMRVSVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL MKDDSI+GIYDTLK+ A
Sbjct: 180 NDLDAAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLAMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPMLQVFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLQVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADI+ FLDL+KN GKEE RARDLFYA+W+ DLFM RV + +W+L CP++ GL
Sbjct: 300 MEPWHADIYAFLDLKKNHGKEEMRARDLFYAMWISDLFMRRVEANEEWTLMCPNECPGLF 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
EFE LY +YE EG+ + + AR+LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 THHSEEFEELYLKYEAEGKGRKTVKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLASIALP +V KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFV--------------------KNGSF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +VTK +T NLNK+ID N+YP++ SN+RHRPIG+G+QGLAD FI+L LPF S
Sbjct: 460 DHKELFKVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA++LN++IFET+Y+ A+ AS E+A ++GPY T+ GSP+S+G Q ++W + S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEMAKEEGPYSTFEGSPISQGEFQHNLWGVKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW LR+ + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWEKLRKEVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL LGLW+ +K +++ NGS+ I IP++++ +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVNLGLWNENMKQELMRANGSIQHIETIPQDIRDLYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
G +IDQSQSLN+ ME ++ KLTS+HFYAW G+KTGMYYLRT+AA DAIKFT+D S
Sbjct: 700 GYFIDQSQSLNLFMENANYAKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLDNS 756
>gi|443896993|dbj|GAC74335.1| hypothetical protein PANT_11d00009 [Pseudozyma antarctica T-34]
Length = 1291
Score = 1082 bits (2799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/781 (62%), Positives = 625/781 (80%), Gaps = 18/781 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV KRDGRKE V+FDK+TAR+ KL YGL + + DP+ + +KV G+Y+GVTT +LD LA
Sbjct: 2 IYVYKRDGRKEVVKFDKVTARISKLCYGLDQNYVDPIEITRKVIDGIYEGVTTVELDNLA 61
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA T HPDYA+LA R+A+SNLHK T +FS+ ++ +Y+Y N ++G+ + +++D
Sbjct: 62 AETAAYKTTTHPDYAVLAARIAISNLHKETSKNFSQVVQALYDYINPKNGRHSPMISDAT 121
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+++M + LD AIIY+RDF +++FGFKTLERSYLL+++ +V ERPQHMLMRV+VGIH
Sbjct: 122 YKVVMAHKDQLDSAIIYERDFHYNFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 181
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +SA++TY+LMSQ +FTHA+PTLFNAGTP PQLSSCFL+ MKDDSI+GIYDTLK CA+
Sbjct: 182 EDIESAIETYNLMSQKYFTHASPTLFNAGTPHPQLSSCFLVTMKDDSIDGIYDTLKTCAM 241
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IR +GSYI GTNG SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 242 ISKTAGGIGLNIHCIRGTGSYIAGTNGVSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 301
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+D+FEFLDLRKN GKEE RAR+LFYALWVPDLFM+RV +G WSL CP++ GLA
Sbjct: 302 IEPWHSDVFEFLDLRKNHGKEEVRARELFYALWVPDLFMKRVEQNGDWSLMCPNECPGLA 361
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EGR+K + A+KLW+ IL SQ ETG P++L+KD+ NRKSNQ+NL
Sbjct: 362 DCYGDEFERLYERYEAEGRSKRTVKAQKLWYAILESQTETGNPFILYKDAANRKSNQKNL 421
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI+E+SSP+E AVCNLASIALP ++ D ++ +
Sbjct: 422 GTIKCSNLCTEIIEYSSPDEVAVCNLASIALPTFI------------------DPVSKTY 463
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF+RL V K I +NLNKIID+N+YP+E RRSN+RHRPIGIG+QGLAD F+++G FES
Sbjct: 464 DFKRLHSVAKAICKNLNKIIDINYYPVEEARRSNMRHRPIGIGVQGLADAFMIMGYAFES 523
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LN IFETIY+ AL+ S ELA + G YETY GSP S+G LQ DMW +TPSD WDW
Sbjct: 524 PEARKLNVQIFETIYHAALERSCELAQQHGTYETYAGSPASQGELQYDMWGVTPSDLWDW 583
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+ I+++G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 584 AELKAKIAQHGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 643
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L++L E GLW+ +K +II GS+ + IP+ +K +YKTVWEI QK ++DMAADRG +
Sbjct: 644 LRELVEQGLWNDTMKNRIIAHGGSIQNVPGIPDRIKKLYKTVWEISQKAIIDMAADRGAF 703
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
I QSQSLNIH+ P G+LTS+HFY W KG+KTG YYLRT+ A++A++FT+ + +N K
Sbjct: 704 ICQSQSLNIHLSAPTFGQLTSMHFYGWKKGLKTGTYYLRTKPASNAVQFTLSVAEVNEAK 763
Query: 781 A 781
A
Sbjct: 764 A 764
>gi|325953831|ref|YP_004237491.1| ribonucleoside-diphosphate reductase subunit alpha [Weeksella
virosa DSM 16922]
gi|323436449|gb|ADX66913.1| ribonucleoside-diphosphate reductase, alpha subunit [Weeksella
virosa DSM 16922]
Length = 779
Score = 1082 bits (2798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/810 (63%), Positives = 636/810 (78%), Gaps = 31/810 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKR+G++E V FDKITAR+ KL YGLS + D + +A+KV G+Y VTTT+LD LA
Sbjct: 1 MYVIKRNGKQEAVHFDKITARIHKLVYGLSVDEKDVIEIAKKVIQGIYDNVTTTELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA T HPD+A+LA R++VSNLHK T SFS+T K +Y+Y + + +A L++++
Sbjct: 61 AETAATYTTVHPDFAVLAARISVSNLHKNTLKSFSKTAKLLYDYIDPVTNTRAPLLSEET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II NA +D +IIYDRD++FDYFGFKTLERSYL++ + +V ERPQH+ MRV++GIHK
Sbjct: 121 YDIIRNNADEIDSSIIYDRDYNFDYFGFKTLERSYLIRTNGKVTERPQHLFMRVALGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +A++TY+LMS+ WF HATPTLFN+GTP+PQ+SSCFLL M +DSI GI+DTLK+CA+
Sbjct: 181 QDIKAAIETYNLMSEKWFIHATPTLFNSGTPKPQMSSCFLLSMTEDSIVGIFDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GT G SNGI+PML+V+NDTARYVDQGGGKRKGA A+Y
Sbjct: 241 ISQSAGGIGLSIHNVRATGSYIKGTGGISNGIIPMLRVYNDTARYVDQGGGKRKGAIAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FL+LRKN GKEE RARDLF ALW+PDLFM+RV ++ WSLF P++A GL
Sbjct: 301 LEPWHADIFDFLNLRKNHGKEEMRARDLFPALWIPDLFMQRVEENADWSLFDPNEAPGLY 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G FE LY YE +G + + AR+LW IL +QIETGTPYM +KD+ N KSNQ+N+
Sbjct: 361 DVYGSSFEELYQHYENDGIFRKKVKARELWNAILEAQIETGTPYMCYKDAANEKSNQKNI 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G I+SSNLCTEI+E++S +E AVCNLAS+ALPRYV E G F
Sbjct: 421 GVIRSSNLCTEIMEYTSADEVAVCNLASLALPRYVSENG--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTKI+T NLNK+ID N+YP+ T SN +HRPIG+G+QGLAD F+LL +PFES
Sbjct: 461 DFQKLYEVTKIVTRNLNKVIDGNYYPVPETENSNFKHRPIGLGVQGLADVFLLLRMPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+A+QLNKDIFETIYY A+++S ELA ++G YE++ GSP+S+G Q D+WN+ PSDRWDW
Sbjct: 521 EKARQLNKDIFETIYYAAMESSMELAKEEGAYESFKGSPLSEGKFQFDLWNVQPSDRWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LR+ + + GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF+VVNKHL
Sbjct: 581 KGLRKNVMEFGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEFVVVNKHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+KDL EL LW +K K+I ENGSV I EIP LK +YKTVWEIKQKT++DMAADRG +
Sbjct: 641 IKDLIELNLWDARMKNKLIAENGSVQNIEEIPANLKELYKTVWEIKQKTIIDMAADRGAF 700
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
I QSQSLN+ M +P+ KLTS+HFYAW G+KTGMYYLRT+AAADAIKFTV EK
Sbjct: 701 ICQSQSLNLFMAEPNMAKLTSMHFYAWKSGLKTGMYYLRTKAAADAIKFTV-------EK 753
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ E + CSL N +EC+ CGS
Sbjct: 754 VQSS----EDKQVDISCSLDNPDECIVCGS 779
>gi|195473603|ref|XP_002089082.1| GE26085 [Drosophila yakuba]
gi|194175183|gb|EDW88794.1| GE26085 [Drosophila yakuba]
Length = 812
Score = 1082 bits (2798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/820 (60%), Positives = 638/820 (77%), Gaps = 29/820 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YVIKRDGR+E V FDKIT+R++KL Y L+ + DPV + +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA +T NHPDYA+LA R+AVSNLHK TK FS+ +D+Y + NK + +K LV++
Sbjct: 72 AEIAAGLTCNHPDYAILAARIAVSNLHKETKKVFSDVFEDLYEHVNKETNQKVPLVSEFH 131
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y ++ KNA L+ +IIYDRDF ++YFGFKTLERSYLLK + ++ ERPQHMLMRV++GIH
Sbjct: 132 YNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ +FTHA+PTLF A T +PQLSSCFLL M DSIEGI+ ++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA G+ I GTNG+SNG+VPML+VFN+ ARYVDQGGGKR GAFAIY
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+FEFL+L+KN GKEE RARDLFYALW+PDLFM+RV +G WSL CP GL
Sbjct: 312 LEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLQ 371
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY +YE+EGRA + A+ LWF I+ +Q+ETG PYMLFKD+CNRKSNQQN+
Sbjct: 372 DVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+S+P+E AVCNLASIAL +V + + +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTKI+T+NLNKIID+N+YP+ ++SNLRHRP+GIG+QG AD IL+ P+ES
Sbjct: 473 DFKKLKEVTKIVTKNLNKIIDINYYPLPEAKKSNLRHRPVGIGVQGFADALILMRFPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA LN+ IFETIYY AL+AS ELA +GPYETY GSP+SKGILQ DMW+ P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYYGALEASCELAQAEGPYETYEGSPVSKGILQYDMWDKVPTNLWDW 592
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I ++GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIYTRRVLSGEF VVN HL
Sbjct: 593 QKLKESIKQHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLTEL LW +K +II GS+ I IP++++ +YKTVWEI K+ + MAADRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIEAIPQKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS----VL 776
IDQSQS NIH+ +P++GKLTS+HFY+W G+KTGMYYLRT+ AA+AI+FTV+ +
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKQGAVSI 772
Query: 777 NNEKA------NRADNDVEANLAQVVCSLKNQEECMACGS 810
N + + + D E +A +VCSL+N++ CM+CGS
Sbjct: 773 NGQNGASEGSPQKFEEDRERKMADMVCSLENKDACMSCGS 812
>gi|225012155|ref|ZP_03702592.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacteria
bacterium MS024-2A]
gi|225003710|gb|EEG41683.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacteria
bacterium MS024-2A]
Length = 814
Score = 1082 bits (2798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/835 (61%), Positives = 646/835 (77%), Gaps = 46/835 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGRKEP+ FDKITAR++KL+YGL+ DPV VA +V G+Y GVTT++LD LA
Sbjct: 1 MFVLKRDGRKEPIMFDKITARIRKLNYGLNP-LVDPVRVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT HPDYA LA R++VSNLHK TK SFSET+ D+Y Y N R+GKKA L++D+V
Sbjct: 60 AEIAATMTTTHPDYAKLAARISVSNLHKNTKKSFSETMTDLYKYVNPRTGKKAPLLSDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++II KNA LD +IIY+RDF +D+FGFKTLERSYLLK++ +VERPQHMLMRVS+GIH
Sbjct: 120 HDIIQKNADKLDSSIIYNRDFGYDFFGFKTLERSYLLKLNGVIVERPQHMLMRVSIGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++AL+TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL MKDDSI+GIYDTLK+ A
Sbjct: 180 EDIEAALETYELMSKRYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FL+L+KN GKEE RARDLFYA+W PDLFM+RV ++ W+L CP++ L
Sbjct: 300 VEPWHADIFDFLELKKNHGKEEMRARDLFYAMWTPDLFMKRVEENADWTLMCPNECPDLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ G EF+ +Y +YE EGR + I AR+LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 NVHGDEFDAMYLKYESEGRGRRTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+++P+E AVCNLASIALP +V++ F
Sbjct: 420 GTIRSSNLCTEIMEYTAPDEVAVCNLASIALPMFVKDGA--------------------F 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +VT +T+NLN++ID N+YP+ + SN RHRP+G+G+QGLAD FI+L LPF S
Sbjct: 460 DHQALYDVTVRVTKNLNRVIDRNYYPVIEAQNSNFRHRPVGLGVQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA++LN++IFET+Y+ A+ AS+E A ++GPYETY GSP++ G Q ++W I S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASSEEAKREGPYETYKGSPIANGEFQHNLWGIKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW++LR+ + K GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWAALRKTVKKQGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL + GLW+ +K +++ NGSV I IPE+LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVDRGLWNEDMKQELMRNNGSVQSIEGIPEDLKELYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDT---- 773
G +IDQSQSLN+ ME KLTS+HFY W G+KTGMYYLRT++A DAIKFT+DT
Sbjct: 700 GYFIDQSQSLNLFMEGATMAKLTSMHFYGWKSGLKTGMYYLRTKSAVDAIKFTLDTKSKA 759
Query: 774 ------------SVLNNEKANRADNDVEA----NLAQVVCSLKNQE--ECMACGS 810
S KA +A VE L Q++ K E +C+ CGS
Sbjct: 760 KVPEVEAAVGAVSTATAGKAAQAPVPVEPLSPQELKQMLAQAKEGEDDDCLMCGS 814
>gi|453080262|gb|EMF08313.1| ribonucleoside-diphosphate reductase large chain [Mycosphaerella
populorum SO2202]
Length = 914
Score = 1082 bits (2798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/776 (63%), Positives = 625/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + KV GVY+GVTT QLD+LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDSTAITMKVINGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK TK FS + D+Y Y N ++ K + +++D
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVSDLYTYVNPKNNKPSPMISDYT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+++M++A L+ AI+YDRDF++ YFGFKTLERSYLL+++ +V ERPQHM+MRV+VGIH
Sbjct: 121 YKVVMEHADELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD ++A++TY+ MS +FTHA+PTLF+AGTP QL+SCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 DDIEAAIETYNYMSNKYFTHASPTLFSAGTPNAQLASCFLIDMKDDSIEGIYDTLKICAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+ H IRA+GSYI GTNG+SNG++PML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKNAGGIGLNCHKIRATGSYIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+ F+DLRKN GKEE RARDLF+ALW+PDLFM+RV + +W+L CP++ GLA
Sbjct: 301 LEPWHADVISFMDLRKNHGKEEVRARDLFFALWIPDLFMKRVEQNAEWTLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+EGR + + A+K+W+ IL +Q ETG P++L+KD+ NRKSNQ+NL
Sbjct: 361 DVYGDEFEELYTRYEKEGRGRETVRAQKVWYAILEAQTETGGPFILYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+++P+E AVCNLAS+ALP YV D +N F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASLALPTYV------------------DLENEKF 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EV +++T+NLNKII+VNHYP+ ++SN+RHRPIG+G+ GLAD F+ L +PFES
Sbjct: 463 DFQKLHEVVQVVTKNLNKIIEVNHYPVPEAKKSNMRHRPIGLGVSGLADAFLALRMPFES 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ AL AS +LA K GPYETY GSP+SKG LQ DMW +TPSD WDW
Sbjct: 523 PEARQLNIQIFETIYHAALTASCDLAKKLGPYETYEGSPVSKGELQYDMWGVTPSDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+ I+++GVRNSLLVAPMPTASTSQI+G NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 DSLKAKIAEHGVRNSLLVAPMPTASTSQIMGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL + GLWS +K +II + GS+ +I I ++LKA+YKTVWEI Q+ +V MAADRG +
Sbjct: 643 LKDLVDRGLWSENMKNRIIADGGSIQRIPNIGDDLKALYKTVWEISQRNIVQMAADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT+AA+ I+FTVD +L
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTQAASAPIQFTVDQEML 758
>gi|399033616|ref|ZP_10732238.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
sp. CF136]
gi|398068051|gb|EJL59512.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
sp. CF136]
Length = 796
Score = 1082 bits (2797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/822 (63%), Positives = 641/822 (77%), Gaps = 38/822 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDG KEPV FDKIT R+KKL YGL+ E DPV VA +V G+Y GV+T++LD LA
Sbjct: 1 MYVVKRDGHKEPVMFDKITERIKKLCYGLN-ELVDPVKVAMRVIEGLYDGVSTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT+ HPDYA LA RVA+SNLH TK SFSET+KDMY+Y N R+G+ A L++D+V
Sbjct: 60 AETAASMTIAHPDYAQLAARVAISNLHSNTKKSFSETMKDMYHYVNPRNGQDAPLLSDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++I +NAA LD IIY RDF++DYFGFKTLERSYLLK++ ++VERPQHMLMRVSVGIH
Sbjct: 120 FKVIQENAAFLDSHIIYTRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD S ++TY LMS+ +FTHATPTLFNAGTP+PQ+SSCFLL M+DDSI+GIYDTLK+ A
Sbjct: 180 DDLKSVIETYDLMSKKYFTHATPTLFNAGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+E WHADIFEFLDL+KN GKEE RARDLF+A+W DLFM+RV++D W+L CP++ GL
Sbjct: 300 IETWHADIFEFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVQEDTTWTLMCPNECPGLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY YE G+ + I AR+LW +IL SQIETGTPYML+KD+ NRKSN +NL
Sbjct: 360 DVYGEEFEALYMDYEFRGKGRKTIRARELWEKILESQIETGTPYMLYKDAANRKSNHKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++S +E AVCNLASI+LP ++ +N F
Sbjct: 420 GTIRSSNLCTEIMEYTSKDEIAVCNLASISLPMFI--------------------ENGKF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L VTK +T NLNK+ID N+YP++ SN+RHRP+G+G+QGLAD FI+L LPF S
Sbjct: 460 DHQALYNVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPVGLGVQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA+ LN++IFET+Y+ A+ AS E+A ++GPY T+ GSPMSKG Q +MW + S R
Sbjct: 520 DEAKALNQEIFETLYFAAVTASMEMAKEEGPYSTFEGSPMSKGEFQYNMWGMKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+SLR+ + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWASLRKEVVEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL DL E GLW+ LK +I+ NGSV I IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLHDLVERGLWNETLKQEIMRHNGSVQNIDVIPQDLKELYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQSLN+ M+ ++ KLTS+HFYAW G+KTGMYYLRT++A DAIKFT LN
Sbjct: 700 GYFIDQSQSLNLFMQDANYSKLTSMHFYAWQSGLKTGMYYLRTKSAVDAIKFT-----LN 754
Query: 778 NEK--------ANRADNDVEANLAQVV-CSLKNQEECMACGS 810
N+K A + VE A ++ + E+C CGS
Sbjct: 755 NDKKEEVPSLVAETEEISVEDYKAMLLKAQAADPEDCEMCGS 796
>gi|406604875|emb|CCH43750.1| ribonucleoside-diphosphate reductase subunit M1 [Wickerhamomyces
ciferrii]
Length = 877
Score = 1081 bits (2796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/780 (62%), Positives = 630/780 (80%), Gaps = 14/780 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGR+EPV+FDKITAR+ +L YGL H D V + Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRREPVKFDKITARISRLCYGLDPAHIDAVKITQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS + ++YNY N R+GK + +++ D
Sbjct: 61 AETCAYMTTIHPDYATLAARIAISNLHKQTTKQFSAVVDELYNYINPRTGKHSPMLSKDT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+ + + AI+Y+RDF+++YFGFKTLERSYLL++D +V ERPQH++MRV++GIH
Sbjct: 121 YDIVQEFKDEFNSAIVYNRDFNYNYFGFKTLERSYLLRVDGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +S ++TY+LMS+ +FTHA+PTLFNAGTP PQ+SSCFL+ M+DDSI+GIY+TLK+CA+
Sbjct: 181 RDIESVVETYNLMSERYFTHASPTLFNAGTPHPQMSSCFLVAMQDDSIDGIYETLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+ DLFM+RV +G+W+LF P++A GL
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWISDLFMKRVESNGEWTLFSPNEAPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+++G EFE LY +YE+EGR + + A+KLW+ IL +Q ETGTPYML+KD+CN+K+NQ+NL
Sbjct: 361 ETYGDEFEELYERYEKEGRGRKTVKAQKLWYAILEAQTETGTPYMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLCTEIVE+SSP+E AVCNLASIALP ++ S D K + +
Sbjct: 421 GIIKSSNLCTEIVEYSSPDEVAVCNLASIALPAFIEV--------------SADRKTQFY 466
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FE+L ++ K++T+NLN+IID N YP+E RRSN+R+RPI +G+QGLAD F+ L LPFES
Sbjct: 467 NFEQLHKIAKVVTKNLNRIIDRNFYPVEEARRSNMRNRPIALGVQGLADAFMALRLPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+A++LN IFETIY+ A++AS ELA K+G YET+ GSP S+G+LQ D+W+ P+ W+W
Sbjct: 527 QKAKELNIQIFETIYHAAVEASVELAKKEGAYETFQGSPASQGLLQFDLWDQKPTGLWNW 586
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+ + K GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN +L
Sbjct: 587 DDLKADVVKYGVRNSLLVAPMPTASTSQILGYNECFEPYTSNIYSRRVLAGEFQIVNPYL 646
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W A+K+ II +NGS+ + IP+ELK +YKTVWEI QKT++DMAADR Y
Sbjct: 647 LRDLVDLGVWDDAMKSHIIADNGSIQNLPNIPKELKDLYKTVWEISQKTVIDMAADRSAY 706
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FTVD+SV N +
Sbjct: 707 IDQSQSLNIHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTVDSSVAANAQ 766
>gi|341877710|gb|EGT33645.1| CBN-RNR-1 protein [Caenorhabditis brenneri]
Length = 786
Score = 1081 bits (2796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/797 (62%), Positives = 631/797 (79%), Gaps = 19/797 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV+KRDGR E V FDKIT+R++KLSYGL+ E DPV VA KV +G+YKGVTT +LD LAA
Sbjct: 8 YVVKRDGRSEDVHFDKITSRIQKLSYGLNMEFVDPVAVAIKVISGLYKGVTTVELDNLAA 67
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA+MT HP+YALLA R+AVSNLHK T FSE ++ ++N+++ +GK A +++D+ +
Sbjct: 68 ETAASMTTQHPEYALLAARIAVSNLHKKTNKVFSEVMRTLHNFHHPHTGKHAPMISDETW 127
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
II KNA L+ AI+YDRD+ + YFGFKTLERSYLLK++ VVERPQ MLMRV++GIH +
Sbjct: 128 AIIEKNADKLNSAIVYDRDYSYTYFGFKTLERSYLLKINKEVVERPQQMLMRVAIGIHGN 187
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D +A++TY+LMS+ + THA+PTLFN+GT +PQ+SSCFLL M +DSI GIYDTLK+CA+I
Sbjct: 188 DIAAAIETYNLMSERYMTHASPTLFNSGTCRPQMSSCFLLTMSEDSILGIYDTLKQCALI 247
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKSAGGIGL++H IRA+GS I GTNG+SNG++PML+V+N+TARYVDQGG KR GAFAIYL
Sbjct: 248 SKSAGGIGLNVHKIRATGSVIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIYL 307
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+FEF+ LRKN G EE RARDLF ALWVPDLFM+RV D WSL CP + GL D
Sbjct: 308 EPWHADVFEFVALRKNTGPEEERARDLFLALWVPDLFMKRVEKDQDWSLMCPCECPGLDD 367
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EFE LY++YE EGR + V+ ARKLW I+++QIETG PY+ +KD+ NRKSNQQNLG
Sbjct: 368 CWGEEFEKLYTRYEAEGRFRKVVKARKLWEHIVSNQIETGLPYITYKDAANRKSNQQNLG 427
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIK SNLCTEI+E+S+P+E AVCNLASIAL R+V + + FD
Sbjct: 428 TIKCSNLCTEIIEYSAPDEIAVCNLASIALNRFV-------------------TPEKTFD 468
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++LAEVTK+IT+NLNKIIDVN+YP+E R SN+RHRPIG+G+QGLAD F+L+ PF S
Sbjct: 469 FKKLAEVTKVITKNLNKIIDVNYYPVEEARNSNMRHRPIGLGVQGLADCFMLMRFPFTSE 528
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
A+ LNK IFETIYY AL+AS ELA KDGPY TY GSP+SKG LQ DMW +TP+D+ +W+
Sbjct: 529 GARDLNKRIFETIYYAALEASCELAEKDGPYSTYQGSPVSKGQLQFDMWGVTPTDQCNWN 588
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
+LR+ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSG+F +VN H+L
Sbjct: 589 ALRQKIAKHGVRNSLLMAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQIVNPHML 648
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
KDL E GLWS +K ++I NGS+ I IP+++K +Y+TVWEI QK +++MAADRG +I
Sbjct: 649 KDLVERGLWSDEMKNRLIANNGSIQNIPGIPDDIKELYRTVWEISQKEIIEMAADRGAFI 708
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
DQSQSLNIHM +P + +TS+HFY W KG+KTGMYYLRT+ A +A++FTVD S L
Sbjct: 709 DQSQSLNIHMAKPSYAGITSMHFYGWKKGLKTGMYYLRTKPAVNAVQFTVDKSALKTPSK 768
Query: 782 NRADNDVEANLAQVVCS 798
+ + V+CS
Sbjct: 769 QEVAKEEPQDEGCVMCS 785
>gi|187608195|ref|NP_001120566.1| ribonucleotide reductase M1 [Xenopus (Silurana) tropicalis]
gi|171847253|gb|AAI61529.1| LOC100145720 protein [Xenopus (Silurana) tropicalis]
Length = 797
Score = 1081 bits (2795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/816 (63%), Positives = 651/816 (79%), Gaps = 25/816 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ E DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNLEFVDPAQITMKVIQGLYNGVTTIELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +V+ +
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKIFSDVMEDLYNYVNPLNGKHSPMVSKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++++ N L+ +IIYDRDF +++FGFKTLERSYLLK+D +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDLVLANKDRLNSSIIYDRDFSYNFFGFKTLERSYLLKIDGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLLCMKDDSIEGIYDTLK+CA+
Sbjct: 181 TDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+FEFLDL+KN GKEE RARDLFYA+W+PDLFM+RV ++ WSL CP + GL
Sbjct: 301 LEPWHYDVFEFLDLKKNTGKEEQRARDLFYAMWIPDLFMKRVENNLDWSLMCPHECPGLE 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG +FE LY +YE EGRA+ V+ A++LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGDKFEELYERYEREGRARKVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSDDEVAVCNLASLALNMYV-------------------TPERSF 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LA+VTK+I NLNKII++N YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLADVTKVIVRNLNKIIEINFYPVPEAEYSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL++S ELA + GPY+TY GSP+SKGILQ DMWN+TP+ WDW
Sbjct: 522 EEAQLLNKQIFETIYYAALESSCELAKELGPYDTYEGSPVSKGILQYDMWNVTPTGLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+E I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 AALKEKIAKYGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+KDLTE GLW+ +K +II NGS+ + +IP +LK +YKTVWEI QKT++ MAADRG +
Sbjct: 642 MKDLTERGLWNEEMKNQIIANNGSIQNVPDIPADLKELYKTVWEISQKTVITMAADRGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HF+ W +G+KTGMYYLRTR AA+ I+FT++ L ++
Sbjct: 702 IDQSQSLNIHVAEPNYGKLTSMHFFGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKEKE 761
Query: 781 ------ANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ + E N A +VCSL+N++EC+ CGS
Sbjct: 762 LISKETMEKDKEEKEKNKAAMVCSLENRDECLMCGS 797
>gi|379729067|ref|YP_005321263.1| ribonucleoside-diphosphate reductase subunit alpha [Saprospira
grandis str. Lewin]
gi|378574678|gb|AFC23679.1| ribonucleoside-diphosphate reductase, alpha subunit [Saprospira
grandis str. Lewin]
Length = 803
Score = 1080 bits (2793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/822 (59%), Positives = 639/822 (77%), Gaps = 31/822 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+GRKE V FDKI R+ L GL + D + +++KV G+Y GV+T LD+LA
Sbjct: 1 MQVTKRNGRKEDVSFDKIMRRIYYLCDGLDNRYIDVIEISKKVILGLYDGVSTEVLDKLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+M HPDYA+LA R++VS+LHK + NSF+ET++ ++ Y + ++G+ A ++ADD
Sbjct: 61 AETAASMATEHPDYAILAARISVSDLHKGSSNSFTETMRRLHQYIDPKTGENAQMIADDF 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++ K++ LD AI+++RD+D+D+FGFKTLERSYL+K++ +++ERPQ+M+MR ++GIH
Sbjct: 121 MALVEKHSEQLDAAIVHERDYDYDFFGFKTLERSYLMKVNGKIIERPQYMIMRTALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
++ ++AL+TY LMS+ WFTHATPTLFN+GTP+PQLSSCFLL M DDSI GI++TL +CA
Sbjct: 181 ENIEAALQTYKLMSERWFTHATPTLFNSGTPRPQLSSCFLLSMTDDSIPGIFETLSRCAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA GSYI GT G+SNGIVPML+V+NDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISQSAGGIGLSIHNIRAKGSYIKGTGGNSNGIVPMLRVYNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDL+KN GKEE RARDLFYALW+PDLFM+RV D +W+L CP++ GL
Sbjct: 301 LEPWHADVFEFLDLKKNHGKEEQRARDLFYALWIPDLFMQRVEQDAEWTLMCPNECPGLY 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
DS+G EFE Y +E EG+ + I AR+LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 361 DSYGEEFEKRYLAFEAEGKGRQTIKARELWMKILESQIETGTPYMLYKDHANRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G I+SSNLCTEI+E+SSP+E AVCNLASIAL ++V E G +
Sbjct: 421 GVIRSSNLCTEIMEYSSPDEVAVCNLASIALSKFVTEDGQ-------------------Y 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF+RL EVT+I+T NLNK+ID+N+YPI+ + SN+RHRP+GIG+QGLAD F+++ LPFES
Sbjct: 462 DFQRLYEVTRIVTRNLNKVIDINYYPIQEAKNSNMRHRPVGIGVQGLADAFLMMRLPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A+QLN+DIFETIY+ A+ S ++A ++GPY TY GSP+S+G Q D+W++TPSDRWDW
Sbjct: 522 EAARQLNRDIFETIYFAAMSESCQMAKEEGPYSTYEGSPISQGKFQFDLWDVTPSDRWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I +GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RR LSGE++VVNKHL
Sbjct: 582 EALRQEILAHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRTLSGEYVVVNKHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL E G W+ LK +I NGSV I +P+E+K +YKT +EIKQ+ ++DM+ADRG +
Sbjct: 642 LKDLIERGYWTQELKEMLIAANGSVQNIEGLPQEIKELYKTAYEIKQRAIIDMSADRGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL---- 776
I QSQSLN+ +E P+ KLTS+HF+AW +G+KTGMYYLR++AA D IKFT+
Sbjct: 702 ICQSQSLNLFVESPNFAKLTSMHFHAWKRGLKTGMYYLRSKAAVDPIKFTLSAKYQQKFV 761
Query: 777 ------NNEKANRADNDVEANLAQ--VVCSLKNQEECMACGS 810
N A R +E +Q V CS+ N ++C+ CGS
Sbjct: 762 GQNGGSNQALAGRTAAQIEEANSQEGVACSIDNPDDCLMCGS 803
>gi|325190738|emb|CCA25231.1| ribonucleosidediphosphate reductase large subunit p [Albugo
laibachii Nc14]
Length = 782
Score = 1080 bits (2793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/811 (62%), Positives = 637/811 (78%), Gaps = 30/811 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKE V+FDKITAR+ KL Y L+ E+ DPV ++QKV AGVY GVTT++LDELA
Sbjct: 1 MYVIKRDGRKEVVKFDKITARITKLCYNLNTEYVDPVQISQKVIAGVYPGVTTSELDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA + HPD++ LA R+A+SNLHK T FSE I+ Y + + A L+A+DV
Sbjct: 61 AETAAYCSTQHPDFSKLAARIAISNLHKNTNKVFSENIQLFYENKHDTTKVPAPLIAEDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y +++KN L+ AII DRDFD+DYFGFKTLE+SYLL+++ +V ERPQHM+MRV+VGIHK
Sbjct: 121 YRVVIKNKEALNSAIIGDRDFDYDYFGFKTLEKSYLLRVNGKVCERPQHMIMRVAVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
++ ++ L+TY MSQ +FTHATPTLFNAGTP+PQLSSCFLL M+DDSI+GIYDTLK+CA
Sbjct: 181 ENLEAVLETYECMSQKFFTHATPTLFNAGTPRPQLSSCFLLSMQDDSIDGIYDTLKQCAC 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+SI NIR + SYI GTNGSSNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISKWAGGIGVSISNIRCTNSYIRGTNGSSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFL+LRKN G E RARDLFYALW+PDLFM+RV D+ +WSLFCP++A L
Sbjct: 301 LEPWHADIFEFLELRKNHGNELHRARDLFYALWIPDLFMKRVEDNQEWSLFCPNEAPRLY 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
++WG EF+ LY +YE A+ + A++LWF IL+SQIETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 ETWGNEFDALYLKYESMNIARKTVKAQQLWFAILDSQIETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLC EI+E+S +E AVCNLAS+AL ++V +K F
Sbjct: 421 GTIRSSNLCCEIIEYSDSKEVAVCNLASVALSKFVYQKE--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
F +L E+TKI+T+NLNKIID+N+YPI + SN RHRPIGIG+QGLADTF+L+GLPFES
Sbjct: 461 QFTKLYEITKIVTKNLNKIIDINYYPIPEAQSSNQRHRPIGIGVQGLADTFLLMGLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
A+ LNK+IFET+Y+ A++AS ELA + GPYE+Y GSP+SKG Q DMW +TP S RWD
Sbjct: 521 KAARDLNKEIFETMYFAAMEASMELARELGPYESYSGSPVSKGTFQFDMWQVTPDSGRWD 580
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W SL+E ++ +G+RNSLL+APMPTAST+QILGN E EP+TSN++ RRVL+GEF +VNK+
Sbjct: 581 WKSLKEQVAAHGIRNSLLLAPMPTASTAQILGNCESIEPFTSNMFNRRVLAGEFTIVNKY 640
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
L+++L E+ LW+ ++ +I+ + GSV I EIP +K YKTVWEIKQK+++DMAADRG
Sbjct: 641 LMEELIEMNLWTSDVRNQILRDRGSVQNIVEIPPNVKEKYKTVWEIKQKSILDMAADRGA 700
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YI QSQSLNIH+ P KLTS+HFYAW KG+KTGMYYLRTR ADAI+FTVD L
Sbjct: 701 YICQSQSLNIHIADPTVSKLTSMHFYAWKKGLKTGMYYLRTRPRADAIQFTVDQKSL--- 757
Query: 780 KANRADNDVEANLAQVVCSLKNQEECMACGS 810
D+ A L+Q + +EEC+ CG+
Sbjct: 758 -----DDSALAKLSQTQ-DVDEEEECLVCGA 782
>gi|71020483|ref|XP_760472.1| hypothetical protein UM04325.1 [Ustilago maydis 521]
gi|46100377|gb|EAK85610.1| hypothetical protein UM04325.1 [Ustilago maydis 521]
Length = 1117
Score = 1080 bits (2792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/794 (62%), Positives = 625/794 (78%), Gaps = 18/794 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV KRDGRKE V+FDK+TAR+ KL YGL + + DP+ + +KV G+Y+GVTT +LD LA
Sbjct: 233 IYVYKRDGRKEVVKFDKVTARISKLCYGLDQNYVDPIEITRKVIEGIYEGVTTVELDNLA 292
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA T HPDYA+LA R+A+SNLHK T +FS+ ++ +Y Y N ++G+ + +++D
Sbjct: 293 AETAAYKTTTHPDYAVLAARIAISNLHKETSKNFSQVVQALYEYVNPKNGRHSPMISDAT 352
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+++M++ LD AIIY+RDF +++FGFKTLERSYLL+++ +V ERPQHMLMRV+VGIH
Sbjct: 353 YKVVMEHKDQLDSAIIYERDFHYNFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 412
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +SA++TY+LMSQ +FTHA+PTLFNAGTP PQLSSCFL+ MKDDSI+GIYDTLK CA+
Sbjct: 413 QDIESAIETYNLMSQKYFTHASPTLFNAGTPHPQLSSCFLVTMKDDSIDGIYDTLKTCAM 472
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IR +GSYI GTNG SNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 473 ISKTAGGIGLNIHCIRGTGSYIAGTNGVSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 532
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+D+FEFLDLRKN GKEE RAR+LFYALWVPDLFM+RV +G WSL CP++ GLA
Sbjct: 533 IEPWHSDVFEFLDLRKNHGKEEVRARELFYALWVPDLFMKRVEQNGDWSLMCPNECPGLA 592
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EGR+K + A+KLW+ IL SQ ETG P++L+KD+ NRKSNQ+NL
Sbjct: 593 DCYGDEFERLYERYEAEGRSKRTVKAQKLWYAILESQTETGNPFILYKDAANRKSNQKNL 652
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI+E+S+P+E AVCNLASIALP ++ D + +
Sbjct: 653 GTIKCSNLCTEIIEYSAPDEVAVCNLASIALPTFI------------------DPVTKTY 694
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF+RL V K I +NLNKIID+N+YP+E R+SN+RHRPIGIG+QGLAD F+++G FES
Sbjct: 695 DFKRLHSVAKAICKNLNKIIDINYYPVEEARKSNMRHRPIGIGVQGLADAFMIMGYAFES 754
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ AL+ S ELA + G YETY GSP S+G LQ DMW +TPSD WDW
Sbjct: 755 AEARRLNVQIFETIYHAALERSCELAEQHGSYETYAGSPASQGELQYDMWGVTPSDLWDW 814
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+ I+K+G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 815 AELKAKIAKHGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 874
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L++L E GLW+ +K +II GS+ + IP+ +K +YKTVWEI QK ++DMAADRG +
Sbjct: 875 LRELVEQGLWNDTMKNRIIAHGGSIQNVPGIPDRIKKLYKTVWEISQKAIIDMAADRGAF 934
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
I QSQSLNIH+ P G+LTS+HFY W KG+KTG YYLRT+ A++AI+FT+ + +N K
Sbjct: 935 ICQSQSLNIHLSAPTFGQLTSMHFYGWKKGLKTGTYYLRTKPASNAIQFTLSVAEVNEAK 994
Query: 781 ANRADNDVEANLAQ 794
A N L Q
Sbjct: 995 AAGKRNGGAVELKQ 1008
>gi|444324020|ref|XP_004182650.1| hypothetical protein TBLA_0J01350 [Tetrapisispora blattae CBS 6284]
gi|387515698|emb|CCH63131.1| hypothetical protein TBLA_0J01350 [Tetrapisispora blattae CBS 6284]
Length = 886
Score = 1080 bits (2792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/795 (61%), Positives = 636/795 (80%), Gaps = 20/795 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPVRFDKITAR+ +L YGL H DPV V Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVCKRDGRKEPVRFDKITARVSRLCYGLDSNHIDPVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+A+SNLHK T FS I+ +YNY N + + A L+A DV
Sbjct: 61 AETAAYMTTVHPDYAILAARLAISNLHKQTTKVFSNLIEQLYNYVNPSNNQPAPLIAKDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M N ++ AI+YDRDF F+YFG+KTLERSYLL+M+ +V ERPQH++MRV +GIH
Sbjct: 121 YETVMANRDEINSAIVYDRDFQFNYFGYKTLERSYLLRMNGQVAERPQHLIMRVCLGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +AL++Y+LMS +FTHATPTLFN+GTP+PQ+SSCFL+ MK+DSIEGIYDTLK+CA+
Sbjct: 181 SDIKAALESYNLMSHRYFTHATPTLFNSGTPRPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+ +HNIR++GSYI GTNG+SNG++PM++V+N+TARYVDQGG KR GA AI+
Sbjct: 241 ISKSAGGIGIHMHNIRSTGSYIAGTNGTSNGLIPMIRVYNNTARYVDQGGNKRPGAIAIF 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV+++G W+LF PS+A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVKENGDWTLFSPSEAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++Y EEG+ + I A+KLW+ IL +Q ETGTP++ +KD+ N+KSNQ+NL
Sbjct: 361 DVYGDEFEALYNRYVEEGKGRKTIKAQKLWYSILEAQTETGTPFICYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EI+E+S+P+ETAVCNLAS+ALP ++ D + +
Sbjct: 421 GTIKSSNLCCEIIEYSAPDETAVCNLASVALPAFIETAA--------------DGTTQTY 466
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L +V K+IT NLNK+ID ++YP+ R SN+RHRPI +GIQGLADT+ LL +PFES
Sbjct: 467 NFQKLHDVCKVITRNLNKVIDRSYYPVPEARNSNMRHRPIALGIQGLADTYQLLRIPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A++LN IFET+Y+ +L+AS ELA DGPY +Y GSP+S+GILQ DMWN+ P+D WDW
Sbjct: 527 DRAKELNIHIFETLYHASLEASCELAEVDGPYSSYEGSPVSQGILQYDMWNVKPTDLWDW 586
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+ I K+GVRNSL++APMPTASTSQILG NECFEP+TSN+Y+RR LSGEF VVN +L
Sbjct: 587 DSLKAKIKKHGVRNSLVLAPMPTASTSQILGYNECFEPFTSNMYSRRTLSGEFQVVNPYL 646
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W A+K +I +NGS+ + IP+ELK +YKTVWEI QK ++D+AADR +
Sbjct: 647 LRDLVDLGVWDDAMKQHLITDNGSIQNLPNIPQELKELYKTVWEISQKKIIDLAADRSAF 706
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLNIH++ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V
Sbjct: 707 IDQSHSLNIHIQAPTMGKLTSMHFYGWQKGLKTGMYYLRTQAASAAIQFTIDKKV----- 761
Query: 781 ANRADNDVEANLAQV 795
A++A N V A+L+++
Sbjct: 762 ADQAGNKV-ADLSKL 775
>gi|17555242|ref|NP_499039.1| Protein RNR-1 [Caenorhabditis elegans]
gi|417657|sp|Q03604.1|RIR1_CAEEL RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|3880121|emb|CAA79574.1| Protein RNR-1 [Caenorhabditis elegans]
Length = 788
Score = 1079 bits (2791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/808 (62%), Positives = 635/808 (78%), Gaps = 30/808 (3%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV+KRDGRKE V FDKIT+R++KLSYGL+ + DPV VA KV +G+YKGVTT +LD LAA
Sbjct: 8 YVVKRDGRKEDVHFDKITSRIQKLSYGLNMDFVDPVAVAIKVISGLYKGVTTVELDNLAA 67
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA+MT HP+YALLA R+AVSNLHK T FSE +K ++ +++ +GK A +++D+ +
Sbjct: 68 ETAASMTTQHPEYALLAARIAVSNLHKKTNKVFSEVMKTLHEFHHPHTGKHAPMISDETW 127
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
II KNA L+ AI+YDRD+ + YFGFKTLERSYLLK++ +VERPQ MLMRVS+GIH D
Sbjct: 128 AIIEKNADKLNSAIVYDRDYSYTYFGFKTLERSYLLKINKEIVERPQQMLMRVSIGIHGD 187
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D SA++TY+LMS+ + THA+PTLFN+GT +PQ+SSCFLL M +DSI GIYDTLK+CA+I
Sbjct: 188 DITSAIETYNLMSERYMTHASPTLFNSGTCRPQMSSCFLLTMSEDSILGIYDTLKQCALI 247
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKSAGGIGL++H IRA+GS I GTNG+SNG++PML+V+N+TARYVDQGG KR GAFAIYL
Sbjct: 248 SKSAGGIGLNVHKIRATGSVIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIYL 307
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHADIFEF+ LRKN G EE RARDLF ALW+PDLFM+RV D +WSL CP + GL D
Sbjct: 308 EPWHADIFEFVSLRKNTGPEEERARDLFLALWIPDLFMKRVEKDQEWSLMCPCECPGLDD 367
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EFE LY++YE EGR + + ARKLW I+++QIETG PY+ +KD+ NRKSNQQNLG
Sbjct: 368 CWGEEFEALYAKYEAEGRVRKTVKARKLWEHIVSNQIETGLPYITYKDAANRKSNQQNLG 427
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIK SNLCTEI+E+S+P+E AVCNLASIAL RYV + + FD
Sbjct: 428 TIKCSNLCTEIIEYSAPDEIAVCNLASIALNRYV-------------------TPEKKFD 468
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F +LAEVTK+IT NLNKIIDVN+YP+E R SN+RHRPIG+G+QGLAD F+L+ PF S
Sbjct: 469 FVKLAEVTKVITRNLNKIIDVNYYPVEEARNSNMRHRPIGLGVQGLADCFMLMRYPFTSA 528
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA+ LNK IFETIYY AL+AS ELA +GPY TY GSP+SKG LQ DMW +TP+D+ DW+
Sbjct: 529 EARDLNKRIFETIYYAALEASCELAELNGPYSTYEGSPVSKGQLQFDMWGVTPTDQCDWA 588
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
+LR+ I+K+G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSG+F +VN H+L
Sbjct: 589 TLRKKIAKHGIRNSLLMAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQIVNPHML 648
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
KDL E GLW+ +K ++I NGS+ I IP ++K +Y+TVWEI QK +++MAADRG YI
Sbjct: 649 KDLVERGLWTDEMKNRLIANNGSIQNIDGIPSDIKELYRTVWEISQKDIIEMAADRGAYI 708
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL-NNEK 780
DQSQSLNIHM +P + +TS+HFY W KG+KTGMYYLRT+ A +A++FTVD + L N++
Sbjct: 709 DQSQSLNIHMAKPSYAGITSMHFYGWKKGLKTGMYYLRTKPAVNAVQFTVDKNALKTNQQ 768
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMAC 808
A + A +A+ E C+ C
Sbjct: 769 A-----ETPATVAE-----SQDEGCLMC 786
>gi|325286575|ref|YP_004262365.1| ribonucleoside-diphosphate reductase subunit alpha [Cellulophaga
lytica DSM 7489]
gi|324322029|gb|ADY29494.1| ribonucleoside-diphosphate reductase, alpha subunit [Cellulophaga
lytica DSM 7489]
Length = 825
Score = 1079 bits (2791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/777 (64%), Positives = 621/777 (79%), Gaps = 24/777 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGRKE + FDKITAR++KL YGL+ DP+ VA +V G+Y GVTT++LD LA
Sbjct: 1 MYVVKRDGRKELIMFDKITARVRKLCYGLNA-LVDPLKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT HPDYA LA R++VSNLHK TK SFSE +KD+Y Y N R+GKKA L++D+V
Sbjct: 60 AEIAATMTTTHPDYAKLAARISVSNLHKNTKKSFSEVMKDLYEYVNPRTGKKAPLLSDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++I N+ LD IIY+RDF +DYFGFKTLERSYLLK++ ++ ERPQHMLMRVS+GIH
Sbjct: 120 FKVIQDNSEKLDSTIIYNRDFGYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSIGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL M+DDSI+GIYDTLK+ A
Sbjct: 180 NDLDAAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNG+VPML+V+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGVVPMLRVYNDTARYVDQGGGKRKGSFAVY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIFEFLDL+KN GKEE RARDLFYA+W+PDLFM+RV + W+L CP++ L
Sbjct: 300 VEPWHADIFEFLDLKKNHGKEEMRARDLFYAMWIPDLFMQRVEANADWTLMCPNECPDLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
EFE Y +E EG+ + I AR LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 KKHDKEFEEAYLAFEAEGKGRKTIKARDLWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+++P+E AVCNLASIALP +V KN F
Sbjct: 420 GTIRSSNLCTEIMEYTAPDEVAVCNLASIALPMFV--------------------KNGEF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L VTK +T NLN +ID N+YP+ SN+RHRPIG+G+QGLAD FI++ +PF S
Sbjct: 460 DHKELFRVTKRVTRNLNTVIDRNYYPVVEAENSNMRHRPIGLGVQGLADAFIMMRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA++LN++IFET+YY A+ AS E+A +DGPY +Y GSP+SKG Q ++W I S R
Sbjct: 520 DEAKKLNQEIFETLYYAAVTASMEMAKEDGPYSSYEGSPISKGDFQHNLWGIKDDELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW LR+ + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWEKLRKSVLKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL +LGLW+ +LK +++ NGS+ I IPE++K +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVQLGLWNESLKQELMRANGSIQHIDIIPEDIKELYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
G +IDQSQSLN+ ME ++ KLTS+HFYAW G+KTGMYYLRT+AAADAIKFTVD S
Sbjct: 700 GYFIDQSQSLNLFMENANYSKLTSMHFYAWKSGLKTGMYYLRTKAAADAIKFTVDNS 756
>gi|365760174|gb|EHN01914.1| Rnr3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 870
Score = 1079 bits (2791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/775 (63%), Positives = 621/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPV+FDKIT+R+ +LSYGL D V V Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA RVA+SNLHK T FS+ I+D++++ N +GK A +++D+V
Sbjct: 61 AETCAYMTTVHPDYATLAARVAISNLHKQTTKQFSKVIEDLHDWVNPATGKLAPMISDEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFKYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +S LKTY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+GL I+NIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RK GKEE RARDLF ALW+PDLFM+RV++DG W+LF PS A GL
Sbjct: 301 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSSAPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EGR K I+A+KLW+ IL SQ ETGTP+M++KD+CNRK+NQQNL
Sbjct: 361 DVWGDEFEELYTRYEREGRGK-TITAQKLWYAILQSQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+SSPEETAVCNLASIALP +V + D K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPEETAVCNLASIALPAFVEV--------------AEDGKTATY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F+ L ++ K+IT NLN++ID N+YP+ R SN+RHRPI +G+QGLADT+++L LPFE
Sbjct: 466 NFQSLHDIAKVITHNLNRVIDRNYYPVPEARNSNMRHRPIALGVQGLADTYMMLRLPFEC 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIY+ L+AS ELA K+G Y T+ GSP SKGILQ DMWN P WDW
Sbjct: 526 DEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPSSKGILQFDMWNAKPFGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 ETLKKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W ++K +I +NGS+ + +P++LK +YKTVWEI QKT+++MAADR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIKDLPNVPQDLKELYKTVWEISQKTIINMAADRSIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQS SLN+ ++ P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQSPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQDV 760
>gi|392397203|ref|YP_006433804.1| ribonucleoside-diphosphate reductase subunit alpha [Flexibacter
litoralis DSM 6794]
gi|390528281|gb|AFM04011.1| ribonucleoside-diphosphate reductase, alpha subunit [Flexibacter
litoralis DSM 6794]
Length = 842
Score = 1079 bits (2791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/779 (64%), Positives = 627/779 (80%), Gaps = 19/779 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKE V KITAR+++L L + P + KV AG+Y VTT +LDELA
Sbjct: 1 MYVIKRDGRKEEVIMQKITARIERLCDNLDTRYIKPKEITYKVLAGLYDNVTTIELDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA M HPDYA+LA R+A+SNLHK TK++FSETI+++YNY N ++ + A L++D+V
Sbjct: 61 AETAATMATVHPDYAILASRIAISNLHKETKDAFSETIEELYNYINPKTNESAGLISDEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K A L+ A+ Y RD+++DYFGFKTLERSYLL++D +V ERPQ M+MRVSVGIH
Sbjct: 121 VQVVRKYAHVLNQAVDYSRDYEYDYFGFKTLERSYLLRLDGKVTERPQQMIMRVSVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A+KTYHL+S+ WFTHATPTLFNAGTP+PQ+SSCFLL ++ DS++GIYDTLK+CA
Sbjct: 181 ADIDAAIKTYHLISERWFTHATPTLFNAGTPKPQMSSCFLLEVQGDSVDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIG+S+HN+RA+GSYI GTNG SNGIVPML+VFNDTARY+DQGG KRKGAFA+Y
Sbjct: 241 ISQSAGGIGVSVHNVRATGSYIRGTNGYSNGIVPMLKVFNDTARYIDQGGNKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDL+KN GKEE RARDLFYALW+ D+FM+RV++DG+WSLFCP++A GLA
Sbjct: 301 LEPWHADVFEFLDLKKNHGKEEARARDLFYALWISDIFMKRVQEDGEWSLFCPNEARGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G E E LY++YE EG+A+ I A++LWF IL +QIETGTPYML+KD N KSNQ+NL
Sbjct: 361 DCYGTEHEELYTRYEREGKARKTIRAQELWFAILEAQIETGTPYMLYKDHANNKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+++P+E AVCNLAS+ALP++V + G ++ F
Sbjct: 421 GTIKSSNLCTEIMEYTAPDEVAVCNLASLALPKFVMDNGNGLE----------------F 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ E+L EV T NLN+IID N+YP+E R SN+RHRPIG+G+QGLAD FILL +PFES
Sbjct: 465 NHEKLYEVAYTATVNLNRIIDRNYYPVEEARNSNMRHRPIGLGVQGLADAFILLRMPFES 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA LNK+IFET+Y+ A+ AS +LA+ +G YET+ GSP+SKG Q DMWN+ S R
Sbjct: 525 EEAAALNKEIFETMYFAAMTASKDLAITEGAYETFEGSPLSKGQFQFDMWNVDEDYHSGR 584
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
W+W LR + K+G RNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVLSGEF+VVN
Sbjct: 585 WNWEELRGEVVKHGARNSLLLAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFVVVN 644
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLLKDL + +W +K ++I NGSV I IP+ELK IYKTVWEI Q+T++DM+ADR
Sbjct: 645 KHLLKDLIAIDMWDDQMKNELISANGSVQNIKRIPQELKDIYKTVWEISQRTIIDMSADR 704
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
G YI QSQSLN+H++ P GKLTS+HF+AW +G+KTGMYYLRT+AAADAIKFTVD L
Sbjct: 705 GVYICQSQSLNVHIQNPTFGKLTSMHFHAWKRGLKTGMYYLRTKAAADAIKFTVDKDAL 763
>gi|401839256|gb|EJT42552.1| RNR3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 866
Score = 1079 bits (2791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/775 (63%), Positives = 621/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPV+FDKIT+R+ +LSYGL D V V Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA RVA+SNLHK T FS+ I+D++++ N +GK A +++D+V
Sbjct: 61 AETCAYMTTVHPDYATLAARVAISNLHKQTTKQFSKVIEDLHDWVNPATGKLAPMISDEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFKYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +S LKTY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+GL I+NIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RK GKEE RARDLF ALW+PDLFM+RV++DG W+LF PS A GL
Sbjct: 301 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSSAPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EGR K I+A+KLW+ IL SQ ETGTP+M++KD+CNRK+NQQNL
Sbjct: 361 DVWGDEFEELYTRYEREGRGK-TITAQKLWYAILQSQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+SSPEETAVCNLASIALP +V + D K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPEETAVCNLASIALPAFVEV--------------AEDGKTATY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F+ L ++ K+IT NLN++ID N+YP+ R SN+RHRPI +G+QGLADT+++L LPFE
Sbjct: 466 NFQSLHDIAKVITHNLNRVIDRNYYPVPEARNSNMRHRPIALGVQGLADTYMMLRLPFEC 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIY+ L+AS ELA K+G Y T+ GSP SKGILQ DMWN P WDW
Sbjct: 526 DEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPSSKGILQFDMWNAKPFGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 ETLKKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W ++K +I +NGS+ + +P++LK +YKTVWEI QKT+++MAADR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIKDLPNVPQDLKELYKTVWEISQKTIINMAADRSIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQS SLN+ ++ P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQSPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQDV 760
>gi|409124161|ref|ZP_11223556.1| ribonucleoside-diphosphate reductase large chain [Gillisia sp.
CBA3202]
Length = 824
Score = 1079 bits (2791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/774 (64%), Positives = 622/774 (80%), Gaps = 24/774 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDG KEPV FDKITAR++KL YGL+ E DP+ VA +V G+Y GVTT++LD LA
Sbjct: 1 MYVLKRDGHKEPVMFDKITARIRKLCYGLN-ELVDPLKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE +A MT +HPDYA LA R++VSNLHK TK +FSE + D++ Y N R+GKKA L+AD+V
Sbjct: 60 AEVSATMTTSHPDYAKLAARISVSNLHKNTKKTFSEVMTDLHEYVNPRTGKKAPLLADEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++I +N LD IIY+RDF++DYFGFKTLERSYLLK++ ++ ERPQHMLMRVS+GIH
Sbjct: 120 QKVIQENKELLDSTIIYNRDFNYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSIGIHI 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +A++TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL MKDDSI+GIYDTLK+ A
Sbjct: 180 DDIAAAIETYDLMSKKFFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FLDL+KN GKEE RARDLFYA+W+PDLFM+RV D W+L CP++ GL
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWIPDLFMQRVEKDENWTLMCPNECPGLF 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D G EFE LY +YEEEG+ + I AR+LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 DIHGEEFEALYHKYEEEGKGRKSIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLASIALP ++ K F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFI--------------------KGNEF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L ++TK + +NLNK+ID N+YP++ SN+RHRP+G+G+QGLAD FI L +PF S
Sbjct: 460 DHKELYKITKRVIKNLNKVIDRNYYPVKEAENSNVRHRPVGLGVQGLADAFIKLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD---R 597
EA+ LN++IFET+Y+ ++ AS ELA+++GPY +Y GSPMSKG Q +MW I D R
Sbjct: 520 DEAKALNQEIFETLYFASVTASMELAIEEGPYSSYEGSPMSKGEFQYNMWGIKDEDLSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+ LR+ + KNGVRNSLL+APMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWAKLRKQVMKNGVRNSLLMAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL E LW+ +K I+ NGSV I IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVERNLWTEDVKNAILRANGSVQGIDIIPQDLKELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
G +IDQSQSLN+ ME ++ KLTS+HFYAW G+KTGMYYLRT++A DAIKFT+
Sbjct: 700 GYFIDQSQSLNLFMENANNSKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTL 753
>gi|294948956|ref|XP_002785979.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
gi|294948958|ref|XP_002785980.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239900087|gb|EER17775.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239900088|gb|EER17776.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
Length = 792
Score = 1079 bits (2790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/817 (62%), Positives = 634/817 (77%), Gaps = 38/817 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKR+G+K V+FDKIT R++ L+ GL++++ D + QKV G+Y GVTTT+LD LA
Sbjct: 3 MYVIKRNGQKADVQFDKITRRIRPLTRGLNEDYVDVTQITQKVAEGIYPGVTTTELDSLA 62
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A M+ HPD++ LA R+AVSNLHK T FS+T+ ++Y + R G+ A LV+++V
Sbjct: 63 AETCAYMSQVHPDFSTLAARIAVSNLHKNTHEKFSDTVTELYQITDGR-GRHAPLVSEEV 121
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM--DSRVVERPQHMLMRVSVGI 178
Y I+M NA LD AI Y+RDFD+DYFGFKTLERSYLLK D +ERPQHM+MRV+VGI
Sbjct: 122 YNIVMANAEKLDKAIDYERDFDYDYFGFKTLERSYLLKRPSDKSCIERPQHMIMRVAVGI 181
Query: 179 HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
H DD D+A++TY LMS FTHATPTLFN+GTP PQ+SSCFLL MK DSIEGIYDTLK+C
Sbjct: 182 HGDDVDAAIETYDLMSTRVFTHATPTLFNSGTPHPQMSSCFLLSMKGDSIEGIYDTLKQC 241
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIG++I IRA+ SYI GTNG SNGIVPML+VFNDTARYVDQGGGKRKG+FA
Sbjct: 242 AMISKTAGGIGVAITGIRATESYIRGTNGFSNGIVPMLRVFNDTARYVDQGGGKRKGSFA 301
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
+YLEPWHAD+FEFLDL+KN GKEE RARDLFYALW+PDLFM+RV +G W+LFCP++A G
Sbjct: 302 VYLEPWHADVFEFLDLKKNHGKEEQRARDLFYALWIPDLFMKRVMSNGDWTLFCPNEAPG 361
Query: 359 LADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQ 418
L D++G EFE LY +YE++G + + A+ LWF+IL SQ ETG PYML+KDS NRKSNQ+
Sbjct: 362 LQDTYGDEFEALYEKYEKDGIGRKTVKAQSLWFKILESQQETGIPYMLYKDSANRKSNQK 421
Query: 419 NLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNR 478
NLGTI+ SNLC EI+E++SP+E AVCNLASIAL +V D K R
Sbjct: 422 NLGTIRCSNLCCEIIEYTSPDEVAVCNLASIALNMFV------------------DKKTR 463
Query: 479 LFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
+DF+RL VTK++T NLNK+ID N+YP+ RRSN+RHRPIGIG+QGLAD F+L+ P+
Sbjct: 464 TYDFDRLHRVTKVVTRNLNKVIDRNYYPVPEARRSNMRHRPIGIGVQGLADAFLLMRFPY 523
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDR 597
ESPEA +LN +IFETIY+ A +AS ELA KDGPYET+ GSP S+GILQ DMW++TP S R
Sbjct: 524 ESPEALKLNNEIFETIYHAACEASMELAKKDGPYETFEGSPASEGILQFDMWDVTPDSGR 583
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+SL+E I KNG+RNSLL+APMPTAST+QILGNNE FEPYT NIY RRVL+GEF+ VN
Sbjct: 584 WDWNSLKEEIKKNGMRNSLLIAPMPTASTAQILGNNEAFEPYTQNIYVRRVLAGEFVQVN 643
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
+HL+ DL ELGLW+ +K KII + GSV + EIP+E++ +YKTVWEIKQK ++DMAA R
Sbjct: 644 RHLVDDLMELGLWNDEIKDKIIRQKGSVQGVEEIPKEVQELYKTVWEIKQKKILDMAAGR 703
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G YIDQSQSLNIHM + KL+S+HFY W G+KTG YYLRT+AAADAI+FT+D +
Sbjct: 704 GPYIDQSQSLNIHMTNCTNAKLSSMHFYGWKLGLKTGQYYLRTKAAADAIQFTLDAKKIT 763
Query: 778 NEKANRADNDVEANLAQVVCSLKNQ------EECMAC 808
+E+ L LK Q E C+AC
Sbjct: 764 ----------MESPLKPRTSPLKPQYVQEDEETCIAC 790
>gi|241672125|ref|XP_002411450.1| ribonucleotide reductase, alpha subunit, putative [Ixodes
scapularis]
gi|215504101|gb|EEC13595.1| ribonucleotide reductase, alpha subunit, putative [Ixodes
scapularis]
Length = 779
Score = 1078 bits (2789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/810 (62%), Positives = 646/810 (79%), Gaps = 31/810 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
++ I GR+E V FDKIT+R++KL YGL+ + DP L+ QKV G+Y GVTT +LD LA
Sbjct: 1 IFYIVSGGRRETVHFDKITSRIQKLCYGLNMDFVDPCLITQKVINGLYPGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+A+SNLHK TK FSE ++D+YN ++++ + +++D+
Sbjct: 61 AETAATMTTKHPDYAILAARIAISNLHKETKKVFSEVVEDLYNMVSEKTRLRTPMISDET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+M+NA + AIIYDRDF++++FGFKTLERSYLLK++ +VVERPQHMLMRVSVGIH
Sbjct: 121 YKIVMENAEAFNSAIIYDRDFNYNFFGFKTLERSYLLKINGKVVERPQHMLMRVSVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +S L TY+LMS+ WFTHA+PTLFN+GTP+PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 ADVESVLNTYNLMSEKWFTHASPTLFNSGTPRPQLSSCFLLQMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG++IH IRASGSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVNIHCIRASGSYIAGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F+FLDL+KN GKEE RARDLFYALW+PDLFM RV D WSL CP + GL
Sbjct: 301 LEPWHADVFDFLDLKKNTGKEENRARDLFYALWIPDLFMRRVEQDQMWSLMCPHECPGLH 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ +G +FE LY++YE E R + + A++LW+ IL SQIETGTPYML+KD+CN KSNQ+NL
Sbjct: 361 EVYGEDFEKLYTKYEGEKRYRRQVQAQQLWYAILESQIETGTPYMLYKDACNSKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTE++E+++P+E AVCNLASIAL R+V E GS F
Sbjct: 421 GTIKCSNLCTEVIEYTAPDEVAVCNLASIALNRFVHE-------------GS-------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EV+++IT+NLN+IID+N YPI +SN HRPIGIG+QGLADTFILL LPF+
Sbjct: 461 DFQKLREVSQVITKNLNRIIDINFYPIPEAEKSNKSHRPIGIGVQGLADTFILLRLPFDC 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+A+ LNK IFETIYY AL+AS +LA + GPYETY G P+S+GILQ DMW +TP+D WDW
Sbjct: 521 EKARLLNKQIFETIYYGALEASCDLAKELGPYETYPGCPVSQGILQYDMWGVTPTDMWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+ I++ GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN+HL
Sbjct: 581 AALKARIAQYGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGEFQVVNQHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLT+ GLW+ LK +I NGSV ++ +IP++LK +Y+TVWEI QK ++ MAADRG +
Sbjct: 641 LKDLTDRGLWNEDLKNSLIANNGSVQEL-DIPDDLKELYRTVWEIPQKNILQMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
+DQSQSLN+H+ QP++GKLTS+HF+ W G+KTGMYYLRT+ AA AI+FTVD + L ++
Sbjct: 700 VDQSQSLNVHIAQPNYGKLTSMHFFGWKLGLKTGMYYLRTKPAASAIQFTVDKTALRKKE 759
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
A V CSLKN++EC+ C +
Sbjct: 760 QMNA----------VTCSLKNKDECLMCSA 779
>gi|401625263|gb|EJS43279.1| rnr3p [Saccharomyces arboricola H-6]
Length = 869
Score = 1078 bits (2788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/775 (63%), Positives = 620/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+EPV+FDKIT+R+ +LSYGL D V V Q++ +GVY GVTT +LD LA
Sbjct: 1 MFVIKRDGRQEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ I+D++++ N +GK A +++D++
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL++D V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFKYTYFGFKTLERSYLLRLDGEVAERPQHLVMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++ LKTY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 SDLEAVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+GL I+NIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RK GKEE RARDLF ALW+PDLFM+RV++DG W+LF PS A GL
Sbjct: 301 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGAWTLFSPSAAPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EGR K I A+KLW+ IL +Q ETGTP+M++KD+CNRK+NQQNL
Sbjct: 361 DVWGDEFEALYTRYETEGRGK-TIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+SSP+ETAVCNLASIALP +V S D K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEL--------------SEDGKTATY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FE L E+ K+IT NLN++ID N+YP+ R SN+RHRPI +G+QGLADT+++L LPFES
Sbjct: 466 NFESLHEIAKVITHNLNRVIDRNYYPVPEARNSNMRHRPIALGVQGLADTYMMLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIY+ L+AS ELA K+G Y T+ GSP SKGILQ DMWN P WDW
Sbjct: 526 DEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I ++G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 ETLRKDIVEHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W ++K +I ENGS+ + +P+ LK +YKTVWEI QKT+++MAADR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITENGSIQGLPNVPQVLKELYKTVWEISQKTIINMAADRSIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQS SLN+ ++ P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 760
>gi|120437795|ref|YP_863481.1| ribonucleoside-diphosphate reductase large chain [Gramella forsetii
KT0803]
gi|117579945|emb|CAL68414.1| ribonucleoside-diphosphate reductase large chain [Gramella forsetii
KT0803]
Length = 819
Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/775 (64%), Positives = 622/775 (80%), Gaps = 24/775 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGRKEPV FDKITAR+KKL YGL+ E DPV VA +V G+Y VTT++LD LA
Sbjct: 1 MYVVKRDGRKEPVMFDKITARVKKLCYGLN-ELVDPVKVAMRVIEGLYDNVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT +HPDYA LA R++VSNLHK TK +FSE + D+Y Y N R+G+KA L++D+V
Sbjct: 60 AEIAATMTTSHPDYAKLAARISVSNLHKNTKKTFSEVMTDLYEYVNPRTGEKAPLLSDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I++N LD IIY+RDF +DYFGFKTLERSYLLK++ ++ ERPQHMLMRVS+GIH
Sbjct: 120 YKVIIENKEKLDSTIIYNRDFSYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSIGIHI 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD D+A++TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL MKDDSI+GIYDTLK+ A
Sbjct: 180 DDLDAAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FLDL+KN GKEE RARDLFYA+W+PDLFM+RV + KW+L CP + GL
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWMPDLFMKRVEQNEKWTLMCPQECPGLF 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G EFE LY +YE E + + I AR+LW +I SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 DTYGEEFEKLYEKYEAENKGRKTIKARELWEKITESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLASIALP ++ K F
Sbjct: 420 GTIRSSNLCTEILEYTSPDEVAVCNLASIALPMFI--------------------KGNEF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L ++TK +T+NLNK+ID N+YP++ SN+RHRP+G+G+QGLADTFI L +PF S
Sbjct: 460 DHKELFKITKRVTKNLNKVIDRNYYPVKEAENSNMRHRPVGLGVQGLADTFIKLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD---R 597
+A++LN++IFET+Y+ A+ AS ELA ++GPY T+ GSP+S+G Q ++W I D R
Sbjct: 520 DKAKKLNQEIFETLYFAAVTASMELAKEEGPYSTFKGSPISEGEFQYNLWGIKDEDLSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW LR+ + K GVRNSLL+APMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWGKLRKQVMKEGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL LW +K I+ NGSV I IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVSRNLWDDEVKNAIMRNNGSVQDIDIIPDDLKELYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
G +IDQSQSLN+ ME ++ KLTS+HFYAW G+KTGMYYLRT++A DAIKFT++
Sbjct: 700 GYFIDQSQSLNLFMENANYSKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLE 754
>gi|19115403|ref|NP_594491.1| ribonucleoside reductase large subunit Cdc22 [Schizosaccharomyces
pombe 972h-]
gi|1350600|sp|P36602.2|RIR1_SCHPO RecName: Full=Ribonucleoside-diphosphate reductase large chain;
AltName: Full=Ribonucleotide reductase
gi|1067207|emb|CAA91952.1| ribonucleoside reductase large subunit Cdc22 [Schizosaccharomyces
pombe]
Length = 811
Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/831 (60%), Positives = 648/831 (77%), Gaps = 41/831 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL +H DPV + QKV +GVY GVTT +LD LA
Sbjct: 1 MFVYKRDGRQEKVAFDKITARVSRLCYGLDSDHVDPVEITQKVISGVYPGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T+ FS ++ +++Y N ++ K A +++D +
Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKQTEKVFSTVVQQLHDYVNPKTDKPAPMISDKI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+MK+ LD AIIYDRDF +++FGFKTLERSYLL++D +V ERPQHM+MRV+VGIH
Sbjct: 121 YDIVMKHKDELDSAIIYDRDFTYNFFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A++TY+LMSQ +FTHA+PTLFNAGTP+PQLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 EDIEAAIETYNLMSQRYFTHASPTLFNAGTPRPQLSSCFLVTMKDDSIEGIYDTLKMCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG++IHNIRA+GSYI GTNG+SNGIVPM++V+N+TARYVDQGG KR GAFA Y
Sbjct: 241 ISKTAGGIGINIHNIRATGSYIAGTNGTSNGIVPMIRVYNNTARYVDQGGNKRPGAFAAY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+ +FL+LRK G E+ RAR++FYALW+PDLFM+RV + +W+ FCP++A GLA
Sbjct: 301 LEPWHADVMDFLELRKTHGNEDFRAREMFYALWIPDLFMQRVERNEQWTFFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EF LY +YE+E R + + A+K+W+ IL SQ+ETG P+ML+KDSCNRKSNQ+N+
Sbjct: 361 DVWGDEFVALYEKYEKENRGRRSLPAQKVWYAILQSQVETGNPFMLYKDSCNRKSNQKNV 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLCTEIVE+SSP+E AVCNLAS+ALP ++ +D K +
Sbjct: 421 GTIRCSNLCTEIVEYSSPDEVAVCNLASVALPTFI-----------------KDGK---Y 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L +V K++T NLNKIIDVN+YP+ RRSN+RHRP+G+G+QGLAD F L LPFES
Sbjct: 461 NFQKLHDVVKVVTRNLNKIIDVNYYPVPEARRSNMRHRPVGLGVQGLADAFFALRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A++LN IFETIY+ AL+AS E+A +G YE+Y GSP S+GILQ DMWN+ P+D WDW
Sbjct: 521 AGAKKLNIQIFETIYHAALEASCEIAQVEGTYESYEGSPASQGILQYDMWNVNPTDLWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+E I+K+G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y RRVLSGEF +VN L
Sbjct: 581 AELKEKIAKHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL E LW+ +K K++ +GS+ I EIP++LK +YKTVWEI QKT++D AADRG +
Sbjct: 641 LKDLVERDLWNEDMKNKLVMLDGSIQAIPEIPQDLKDLYKTVWEISQKTVIDYAADRGPF 700
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL--NN 778
IDQSQSLNIH++ P +GK+TS+HFY W KG+KTGMYYLRT AA+ AIKFTVD L N
Sbjct: 701 IDQSQSLNIHLKDPSYGKITSMHFYGWKKGLKTGMYYLRTMAASAAIKFTVDPVALRARN 760
Query: 779 EKAN-----------RADNDVEANLAQV--------VCSLKNQEECMACGS 810
E++N +A+ E ++ CS+KN E C C +
Sbjct: 761 EESNEENKKPVIKNGKAEISAEPTKEEIDIYNEKVLACSIKNPEACEMCSA 811
>gi|194761754|ref|XP_001963091.1| GF14111 [Drosophila ananassae]
gi|190616788|gb|EDV32312.1| GF14111 [Drosophila ananassae]
Length = 812
Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/820 (61%), Positives = 635/820 (77%), Gaps = 29/820 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YVIKRDGR+E V FDKIT+R++KL Y L+ + DPV + +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE +A +T NH DYA+LA R+AVSNLHK T+ FS+ + +Y + NK + +A LV++
Sbjct: 72 AEISAGLTCNHADYAILAARIAVSNLHKETRKVFSDVFEALYTHVNKETNLRAPLVSEFH 131
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y ++ KNA L+ +IIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRV++GIH
Sbjct: 132 YNVVKKNADRLNSSIIYDRDFGYNYFGFKTLERSYLLKINGKVAERPQHMLMRVAIGIHG 191
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ +FTHA+PTLF A T +PQLSSCFLL M DSIEGI+ ++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA G+ I GTNG+SNG+VPML+VFN+ ARYVDQGGGKR GAFAIY
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+FEFLDL+KN GKEE RARDLFYALW+PDLFM+RV + WSL CP GL
Sbjct: 312 LEPWHSDVFEFLDLKKNTGKEEHRARDLFYALWIPDLFMKRVEANEDWSLMCPHKCPGLH 371
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY +YE+EGRA + A+ LWF I+ SQ+ETG PYMLFKD+CNRKSNQQN+
Sbjct: 372 DVWGDEFEKLYVKYEQEGRANRTVKAQSLWFAIIESQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+SSP+E AVCNLASIAL +V + + +
Sbjct: 432 GTIKCSNLCTEIVEYSSPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTK + NLNKIID+N YP+ ++SN+RHRPIGIG+QGLAD IL+ P+ES
Sbjct: 473 DFKKLKEVTKTVARNLNKIIDINFYPLPEAKKSNMRHRPIGIGVQGLADALILMRYPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA LN+ IFETIY+ AL+AS ELA KDG YETY GSP+SKGILQ DMW+ TP+ WDW
Sbjct: 533 EEASLLNQQIFETIYFGALEASCELAQKDGTYETYEGSPVSKGILQYDMWDKTPTGLWDW 592
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+E I ++GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIYTRRVLSGEF VVN HL
Sbjct: 593 KSLKESIKQHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLTEL LW +K +II GS+ I IP++++ +YKTVWEI K+ + MAADRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIESIPQKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV----- 775
IDQSQS NIH+ +P++GKLTS+HFY+W G+KTGMYYLRT+ AA+AI+FTVD +
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVDKKMSALKI 772
Query: 776 -----LNNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ E A ++D E +A +VCSL+N++ CM+CGS
Sbjct: 773 NGQNGVKEESAQDYESDRERKMADMVCSLENKDACMSCGS 812
>gi|308501413|ref|XP_003112891.1| CRE-RNR-1 protein [Caenorhabditis remanei]
gi|308265192|gb|EFP09145.1| CRE-RNR-1 protein [Caenorhabditis remanei]
Length = 786
Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/808 (61%), Positives = 634/808 (78%), Gaps = 32/808 (3%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV+KRDGR E V FDKIT+R++KLSYGL+ E DPV VA KV +G+YKGVTT +LD LAA
Sbjct: 8 YVVKRDGRMEDVHFDKITSRIQKLSYGLNMEFVDPVAVAIKVISGLYKGVTTVELDNLAA 67
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA+MT HP+YALLA R+AVSNLHK T FSE +K ++ +++ +GK A +++D+ +
Sbjct: 68 ETAASMTTQHPEYALLAARIAVSNLHKKTNKVFSEVMKTLHEFHHPHTGKHAPMISDETW 127
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
II KNA L+ AI+YDRD+ + YFGFKTLERSYLLK++ +VERPQ MLMRVS+GIH +
Sbjct: 128 AIIEKNADKLNSAIVYDRDYSYTYFGFKTLERSYLLKINKEIVERPQQMLMRVSIGIHGE 187
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D +A++TY+LMS+ + THA+PTLFN+GT +PQ+SSCFLL M +DSI GIYDTLK+CA+I
Sbjct: 188 DIAAAIETYNLMSERYMTHASPTLFNSGTCRPQMSSCFLLTMSEDSILGIYDTLKQCALI 247
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKSAGGIGL++H IRA+GS I GTNG+SNG++PML+V+N+TARYVDQGG KR GAFAIYL
Sbjct: 248 SKSAGGIGLNVHKIRATGSVIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIYL 307
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+FEF+ LRKN G EE RARDLF ALW+PDLFM+RV D WSL CP + GL D
Sbjct: 308 EPWHADVFEFVSLRKNTGPEEERARDLFLALWIPDLFMKRVEKDQNWSLMCPCECPGLDD 367
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EFE LY++YE EGR + + ARKLW I+++QIETG PY+ +KD+ NRKSNQQNLG
Sbjct: 368 CWGEEFEALYAKYEAEGRVRKTVKARKLWEHIVSNQIETGLPYITYKDAANRKSNQQNLG 427
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIK SNLCTEI+E+S+P+E AVCNLASIAL RYV + + FD
Sbjct: 428 TIKCSNLCTEIMEYSAPDEIAVCNLASIALNRYV-------------------TPEKKFD 468
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++LAEVTK+IT+NLNKIIDVN+YP+E R SN+RHRPIG+G+QGLAD F+L+ PF S
Sbjct: 469 FKKLAEVTKVITKNLNKIIDVNYYPVEEARNSNMRHRPIGLGVQGLADCFMLMRYPFTSK 528
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
+A+ LNK IFETIYY AL+AS ELA +DGPY TY GSP+SKG LQ DMW +TP+D+ DW+
Sbjct: 529 QARDLNKRIFETIYYAALEASCELAERDGPYSTYEGSPVSKGQLQFDMWGVTPTDQCDWA 588
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
+LR+ I+ +G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSG+F +VN H+L
Sbjct: 589 ALRKKIATHGIRNSLLMAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQIVNPHML 648
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
KDL E GLW+ +K ++I NGS+ I EIP ++K +Y TVWEI QK +++MAADRG +I
Sbjct: 649 KDLVERGLWTDEMKNRLIANNGSIQNIPEIPADIKELYLTVWEISQKEIIEMAADRGAFI 708
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
DQSQSLNIHM +P + +TS+HFY W +G+KTGMYYLRT+ A +A++FTVD L
Sbjct: 709 DQSQSLNIHMAKPSYAAITSMHFYGWKQGLKTGMYYLRTKPAVNAVQFTVDKGAL----- 763
Query: 782 NRADNDVEANLAQVVCSLKNQEE-CMAC 808
+A + V +L+ Q+E C+ C
Sbjct: 764 -------KAKVDPKVAALQQQDEGCLMC 784
>gi|241854846|ref|XP_002415982.1| ribonucleotide reductase, alpha subunit, putative [Ixodes
scapularis]
gi|215510196|gb|EEC19649.1| ribonucleotide reductase, alpha subunit, putative [Ixodes
scapularis]
Length = 766
Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/777 (65%), Positives = 630/777 (81%), Gaps = 21/777 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KR+GR E + FDKIT+R+ KL YGL+ + DP ++ QKV G+Y GVTT +LD LA
Sbjct: 10 MFVVKRNGRHESIHFDKITSRISKLCYGLNTDFVDPCVITQKVIVGLYPGVTTVELDNLA 69
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+A+SNLHK TK FSE + D+Y+ N+ +GK +++++
Sbjct: 70 AETAATMTTKHPDYAILAARLAISNLHKETKKVFSEVMTDLYHMVNETNGKSTPMISEET 129
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+M NA L+ +I+YDRDF+++YFGFKTLER++LLK++ +VVERPQHMLMRVS+GIH
Sbjct: 130 YKIVMNNADFLNSSIVYDRDFNYNYFGFKTLERAHLLKINGKVVERPQHMLMRVSIGIHG 189
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD SA++TY+LMS+ WFT A+PTLFNAGTP+PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 190 DDLSSAIETYNLMSEKWFTQASPTLFNAGTPKPQLSSCFLLQMKDDSIEGIYDTLKQCAL 249
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG++IHNIRASGSYI GTNG+SNGIVPML+V+N+TARYVDQGG KR GA AIY
Sbjct: 250 ISKSAGGIGINIHNIRASGSYIAGTNGTSNGIVPMLRVYNNTARYVDQGGNKRPGAIAIY 309
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F+FLDL+KN GKEE RARDLFY LW+PDLFM+RV +DG WSL CP ++ L
Sbjct: 310 LEPWHADVFDFLDLKKNTGKEESRARDLFYGLWIPDLFMKRVEEDGIWSLMCPHESPHLQ 369
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G +FE LY +YE E R + + A++LW I+ SQ ETGTPYML+KD+CNRKSNQ+N+
Sbjct: 370 DVYGEDFEKLYVRYETEKRYRRQVRAQQLWSAIIESQTETGTPYMLYKDACNRKSNQKNV 429
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLASIAL R+V F
Sbjct: 430 GTIKCSNLCTEIVEYTSVDEVAVCNLASIALNRFVYHGH--------------------F 469
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L +VT+++T NLNKIIDVN+YPI + SN+RHRPIGIG+QGLAD FILL LPF+
Sbjct: 470 DFEKLRQVTRVVTRNLNKIIDVNYYPIPEAKLSNMRHRPIGIGVQGLADAFILLRLPFDC 529
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA ++NK IFETIYY AL+ S EL+ K GPYETY GSP+S+GILQ DMWN+TPS+ WDW
Sbjct: 530 DEACEINKKIFETIYYGALEESCELSKKFGPYETYPGSPVSQGILQYDMWNVTPSNLWDW 589
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S+L+E I G+RNSLLVAPMPTAST+QILGNNE EPYTSN+YTRRVLSGEF +VN HL
Sbjct: 590 SALKERIKSFGIRNSLLVAPMPTASTAQILGNNEAMEPYTSNVYTRRVLSGEFQIVNHHL 649
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLT LGLW+ LK ++I NGSV K++ IP+ELK +Y+TVWEI QK +++M+ADRG +
Sbjct: 650 LKDLTRLGLWNDNLKNELIANNGSVQKLN-IPKELKMLYRTVWEISQKNILEMSADRGAF 708
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
+DQSQSLNIH+ QP +GKLTS+HF W G+KTGMYYLRT+ A +AI+FTVD S+LN
Sbjct: 709 VDQSQSLNIHIAQPTYGKLTSMHFCGWKLGLKTGMYYLRTKPAVNAIQFTVDKSLLN 765
>gi|50305185|ref|XP_452551.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641684|emb|CAH01402.1| KLLA0C07887p [Kluyveromyces lactis]
Length = 875
Score = 1077 bits (2785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/788 (62%), Positives = 631/788 (80%), Gaps = 19/788 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDG KEPV+FDKITAR+ +L YGL +H D V + Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGHKEPVQFDKITARVSRLCYGLDAKHIDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ + D+Y + N R+G + +++D+V
Sbjct: 61 AETCAYMTTIHPDYATLAARIAISNLHKQTTKQFSQVVDDLYQWVNPRTGIHSPMISDEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+M N L+ AI+YDRDF F+YFGFKTLERSYLL++D +V ERPQHM+MRV+VGIH
Sbjct: 121 YKIVMDNKDTLNSAIVYDRDFQFNYFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + L+TY+LMSQ +FTHA+PTLFNAGTP PQ+SSCFL+ MK+DSIEGIYDTLK+CA+
Sbjct: 181 NDIERVLETYNLMSQRYFTHASPTLFNAGTPHPQMSSCFLVAMKEDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+DIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV + W+LF P++A GL
Sbjct: 301 IEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEKNQDWTLFSPNEAPGLP 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G EFE +Y +YE EGR + + A+KLW+ IL +Q ETGTP+ML+KD+CN KSNQ+NL
Sbjct: 361 DAYGEEFEEMYERYEREGRGRKTVKAQKLWYAILEAQTETGTPFMLYKDACNLKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+S P ETAVCNLASIALP ++ S D K + +
Sbjct: 421 GTIKSSNLCCEIVEYSDPTETAVCNLASIALPAFIER--------------STDGKTQTY 466
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FE+L + K++T NLN+IID N+YP+ET RRSN+RHRPI +G+QGLAD F++L LPF+S
Sbjct: 467 NFEKLHSIAKVLTRNLNRIIDRNYYPVETARRSNMRHRPIALGVQGLADAFMMLRLPFDS 526
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN +IFETIY+ A +AS ELA ++G YET+ GSP S+G LQ D+W TP+ WDW
Sbjct: 527 EEAKKLNIEIFETIYHGACEASMELAKEEGHYETFPGSPASQGQLQFDLWGKTPTALWDW 586
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+E I NG+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y+RRVLSGEF +VN +L
Sbjct: 587 NTLKEQIKLNGMRNSLLVAPMPTASTSQILGYNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DL +LG+W A+K+ II +NGS+ + IP+ELK +YKTVWE+ QK ++DMAADR Y
Sbjct: 647 LHDLVDLGIWDEAMKSHIIADNGSIQNLPNIPQELKDLYKTVWELSQKHIIDMAADRAAY 706
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D SV
Sbjct: 707 IDQSQSLNIHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKSV----- 761
Query: 781 ANRADNDV 788
A +A N V
Sbjct: 762 AEQAANSV 769
>gi|324506544|gb|ADY42792.1| Ribonucleoside-diphosphate reductase large subunit, partial
[Ascaris suum]
Length = 790
Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/809 (62%), Positives = 626/809 (77%), Gaps = 30/809 (3%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV+KRDGR+E V FDKI R++KL YGL+ ++ D + V+QKV AG++KGV+T QLD LAA
Sbjct: 12 YVVKRDGRREGVHFDKIAHRIEKLCYGLNPDYVDYIEVSQKVIAGLFKGVSTVQLDNLAA 71
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA MT HPDYA+LA R+A+SNLHK TK FSE +YN ++ ++G +++ +V+
Sbjct: 72 ETAADMTTKHPDYAILAARIAISNLHKQTKKMFSEVATVLYNAHHPKTGVHTPMISKEVF 131
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
+II+ NA L+ AI++DRDF F YFGFKTLERSYLLKM+ VERPQH+ MRV+VGIHK+
Sbjct: 132 DIIIANADRLNSAIVHDRDFSFTYFGFKTLERSYLLKMNGEPVERPQHLFMRVAVGIHKE 191
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D D+A++TY+LMS+ WFTHATPTLFN+GT PQ+SSCFLL M++DSIEGI+DTLKKCA+I
Sbjct: 192 DIDAAIETYNLMSERWFTHATPTLFNSGTRLPQMSSCFLLTMQEDSIEGIFDTLKKCALI 251
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKSAGGIGL++H IRA+GS I GT+G SNG+VPML+VFN+TARYVDQGG KR GAFAIYL
Sbjct: 252 SKSAGGIGLNVHCIRATGSSIAGTSGVSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIYL 311
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHADIFE+LDLRKN G E R RDLF+ LWVPDLFM+RVRD+GKWSL CP++ GL D
Sbjct: 312 EPWHADIFEYLDLRKNVGDELERCRDLFFGLWVPDLFMQRVRDNGKWSLMCPAECRGLED 371
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EFE LYS+YE EGR + I AR+LW I+ +QIETG PYM++KD+CNRKSNQQN+G
Sbjct: 372 CWGDEFEKLYSKYEAEGRYRKQIEARRLWEAIITAQIETGVPYMVYKDACNRKSNQQNVG 431
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIK SNLCTEIVE+SSP E AVCNLASIAL R+V + + FD
Sbjct: 432 TIKCSNLCTEIVEYSSPTEVAVCNLASIALNRFV-------------------TTEKTFD 472
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L EVTK++T NLNKIID N+YP+ + SN+RHRPIGIG+QGLAD F+L+ PF S
Sbjct: 473 FKKLHEVTKVVTRNLNKIIDGNYYPVPEAKVSNMRHRPIGIGVQGLADAFMLMRYPFTSA 532
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
A++LNK IFETIY+ AL+AS ELA K GPYE+Y GSP+SKGILQ DMW + P+D+ DW
Sbjct: 533 PARELNKRIFETIYHAALEASCELAKKYGPYESYEGSPISKGILQQDMWGVEPTDQCDWD 592
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
+LR I+K GVRNSLL+APMPTAST+QILGNNE EPYTSN+YTR VLSG F + N HLL
Sbjct: 593 TLRAEIAKYGVRNSLLLAPMPTASTAQILGNNESIEPYTSNVYTRNVLSGNFQIFNPHLL 652
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
KDL +LGLW +K +II GSV I IP E++ +YKTVWE+ QK ++DMAADRG +I
Sbjct: 653 KDLVDLGLWDDEMKLEIIAHKGSVQAIERIPLEIRNLYKTVWELSQKDIIDMAADRGAFI 712
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
DQSQSLNI + +P + TS+HFY WSKG+KTGMYYLRTR A DA++FTVD + L
Sbjct: 713 DQSQSLNIFIAKPSYANCTSMHFYGWSKGLKTGMYYLRTRPAVDAVQFTVDKTRLK---- 768
Query: 782 NRADNDVEANLAQVVCSLKNQEECMACGS 810
E N + C+L + E C+ C S
Sbjct: 769 -------EVNAKMLECALSDPEGCVMCSS 790
>gi|372209391|ref|ZP_09497193.1| ribonucleoside-diphosphate reductase subunit alpha
[Flavobacteriaceae bacterium S85]
Length = 793
Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/813 (61%), Positives = 643/813 (79%), Gaps = 23/813 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDG KE V FDKITAR++K+ YGL+ DPV VA +V G+Y GVTT++LD LA
Sbjct: 1 MYVIKRDGHKESVMFDKITARIRKICYGLNP-IVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT HPDYA LA R++VSNLHK TK SFS+T+ ++Y Y N R+G ++ L++D+V
Sbjct: 60 AEIAATMTTAHPDYAKLAARISVSNLHKNTKKSFSKTMSELYGYVNPRTGLESPLLSDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I NAA LD AI+YDRDF++D+FGFKTLERSYLLK++ ++ ERPQHMLMRV+VGIH
Sbjct: 120 YKVIQDNAALLDSAIVYDRDFNYDFFGFKTLERSYLLKINGKIAERPQHMLMRVAVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + A++TY+LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL M+DDSI+GIYDTLK+ A
Sbjct: 180 NDIEEAIETYNLMSKKFFTHATPTLFNSGTPKPQMSSCFLLQMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA+GSYI GTNG+SNGI+PML+V+NDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIRGTNGTSNGIIPMLKVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FLDLRKN G EE RARDLF ALW+ DLFM+RV ++G W+L CP++ GL
Sbjct: 300 IEPWHADIFDFLDLRKNTGAEEKRARDLFLALWISDLFMKRVEENGDWTLMCPNECPGLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G EFE LY+QYE +G+ + I AR+LW ++L +QIETG PYML+KD+ NRKSNQ+NL
Sbjct: 360 DTYGEEFEALYTQYEAQGKGRKTIKARELWEKVLEAQIETGNPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G I+SSNLCTEI+E+++ +E AVCNLASIA+P +V + + + F
Sbjct: 420 GVIRSSNLCTEIMEYTAKDEVAVCNLASIAIPMFVE---------------TNNKGEKYF 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ ++L +V K +T NL+ +ID N+YP++ SN+RHRP+G+GIQGLAD FI+L LPF S
Sbjct: 465 NHDKLYKVVKKVTRNLDTVIDRNYYPVKEAENSNMRHRPVGLGIQGLADAFIMLRLPFTS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA+ LNKDIFET+Y+ A+++S E+A K G Y T+ GSPMS+G Q ++W + S R
Sbjct: 525 DEAKALNKDIFETLYFAAVESSMEIASKKGAYSTFEGSPMSQGEFQFNLWGVKDEELSGR 584
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW++LRE + KNGVRNSLLVAPMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 585 WDWATLREQVKKNGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 644
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL ELGLW++ LK +++ NGS+ I IP +LK +YKTVWE+ K ++DM+ R
Sbjct: 645 KHLLEDLVELGLWNNDLKEELMRANGSIQHIEGIPADLKELYKTVWELSMKDIIDMSRQR 704
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQSLN+ ME P++ KLTS+HFYAW G+KTGMYYLRT++A +AIKFT+ N
Sbjct: 705 GYFIDQSQSLNLFMESPNYSKLTSMHFYAWKSGLKTGMYYLRTKSAVNAIKFTLS----N 760
Query: 778 NEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
++K E A ++ S +N ++C CGS
Sbjct: 761 DKKQEDKPMSTEEFKAMMLQSKENPDDCEMCGS 793
>gi|424842990|ref|ZP_18267615.1| ribonucleoside-diphosphate reductase, alpha subunit [Saprospira
grandis DSM 2844]
gi|395321188|gb|EJF54109.1| ribonucleoside-diphosphate reductase, alpha subunit [Saprospira
grandis DSM 2844]
Length = 807
Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/822 (59%), Positives = 639/822 (77%), Gaps = 31/822 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+GRKE V FDKI R+ L GL + D + +++KV G+Y GV+T LD+LA
Sbjct: 5 MQVTKRNGRKEDVSFDKIMRRIYYLCDGLDNRYIDVIEISKKVILGLYDGVSTEVLDKLA 64
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+M HPDYA+LA R++VS+LHK + NSF+ET++ ++ Y + ++G+ A ++ADD
Sbjct: 65 AETAASMATEHPDYAILAARISVSDLHKGSSNSFTETMRRLHQYIDPKTGENAQMIADDF 124
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++ K++ LD AI+++RD+D+D+FGFKTLERSYL+K++ +++ERPQ+M+MR ++GIH
Sbjct: 125 MALVEKHSEQLDAAIVHERDYDYDFFGFKTLERSYLMKVNGKIIERPQYMIMRTALGIHG 184
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
++ ++AL+TY LMS+ WFTHATPTLFN+GTP+PQLSSCFLL + DDSI GI++TL +CA
Sbjct: 185 ENIEAALQTYKLMSERWFTHATPTLFNSGTPRPQLSSCFLLSITDDSIPGIFETLSRCAK 244
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA GSYI GT G+SNGIVPML+V+NDTARYVDQGGGKRKGAFAIY
Sbjct: 245 ISQSAGGIGLSIHNIRAKGSYIKGTGGNSNGIVPMLRVYNDTARYVDQGGGKRKGAFAIY 304
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+FEFLDL+KN GKEE RARDLFYALW+PDLFM+RV D +W+L CP++ GL
Sbjct: 305 LEPWHADVFEFLDLKKNHGKEEQRARDLFYALWIPDLFMQRVEQDAEWTLMCPNECPGLY 364
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
DS+G EFE Y +E EG+ + I AR+LW +IL SQIETGTPYML+KD NRKSNQ+NL
Sbjct: 365 DSYGEEFEQRYLAFEAEGKGRQTIKARELWMKILESQIETGTPYMLYKDHANRKSNQKNL 424
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G I+SSNLCTEI+E+SSP+E AVCNLASIAL ++V E G +
Sbjct: 425 GVIRSSNLCTEIMEYSSPDEVAVCNLASIALSKFVTEDGQ-------------------Y 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF+RL EVT+I+T NLNK+ID+N+YPI+ + SN+RHRP+GIG+QGLAD F+LL LPFES
Sbjct: 466 DFQRLYEVTRIVTRNLNKVIDINYYPIQEAKNSNMRHRPVGIGVQGLADAFLLLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+QLN+DIFETIY+ A+ S ++A ++G Y +Y GSP+S+G Q D+W++TPSDRWDW
Sbjct: 526 EEARQLNRDIFETIYFAAMSESCQMAKEEGAYSSYEGSPISQGKFQFDLWDVTPSDRWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ + +GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RR LSGE++VVNKHL
Sbjct: 586 EALRQEVLAHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRTLSGEYVVVNKHL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL E G W+ LK +I NGSV I +P+E+K +YKT +EIKQ+ ++DM+ADRG +
Sbjct: 646 LKDLIERGYWTQELKEMLIAANGSVQNIEGLPQEIKELYKTAYEIKQRAIIDMSADRGAF 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL---- 776
I QSQSLN+ +E P+ KLTS+HF+AW +G+KTGMYYLR++AA D IKFT+
Sbjct: 706 ICQSQSLNLFVESPNFAKLTSMHFHAWKRGLKTGMYYLRSKAAVDPIKFTLSAKYQQKFV 765
Query: 777 ------NNEKANRADNDVEANLAQ--VVCSLKNQEECMACGS 810
N A R +E +Q + CS+ N ++C+ CGS
Sbjct: 766 GQNGGSNQALAGRTAAQIEEANSQEGLACSIDNPDDCLMCGS 807
>gi|305665629|ref|YP_003861916.1| putative ribonucleoside-diphosphate reductase large chain
[Maribacter sp. HTCC2170]
gi|88710385|gb|EAR02617.1| probable ribonucleoside-diphosphate reductase large chain
[Maribacter sp. HTCC2170]
Length = 825
Score = 1076 bits (2782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/777 (64%), Positives = 624/777 (80%), Gaps = 24/777 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGRKE + FDKITAR++KL YGL+ DP+ VA +V G+Y GVTT++LD LA
Sbjct: 1 MYVVKRDGRKELIMFDKITARVRKLCYGLNG-LVDPLKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT HPDYA LA R++VSNLHK TK SFSET++D+Y Y N R+GKKA L++D+V
Sbjct: 60 AEIAATMTTTHPDYAKLAARISVSNLHKNTKKSFSETMEDLYTYVNPRTGKKAPLLSDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I +N+ LD IIY+RDF +DYFGFKTLERSYLLK++ ++ ERPQHMLMRVS+GIH
Sbjct: 120 YKVIAENSVALDSTIIYNRDFGYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSIGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD D+ +TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL MKDDSI+GIYDTLK+ A
Sbjct: 180 DDLDAVKETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLAMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPMLQVFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLQVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIFEFL+L+KN GKEE RARDLFYA+W+ DLFM+RV + +W+L CP++ GL
Sbjct: 300 MEPWHADIFEFLELKKNHGKEEMRARDLFYAMWISDLFMKRVEANEEWTLMCPNECPGLF 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ EFE LY +YE E + + + AR+LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 TNHSEEFEKLYLKYESENKGRKTVRARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLASIALP ++ KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFI--------------------KNGEF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L VTK +T+NLNK+ID N+YP++ SN+RHRPIG+G+QGLAD FILL LPF S
Sbjct: 460 DHKELFRVTKRVTKNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFILLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA++LN++IFET+Y+ A+ AS E A ++G Y +Y GSP+S+G Q ++W I S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEAAKEEGKYSSYDGSPISQGEFQHNLWGIKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+ LR+ + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWTKLRKDVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL LG+W+ +K +++ NGS+ I IP++++ +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVNLGMWNENMKQELMRANGSIQHIETIPQDIRDLYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
G +IDQSQSLN+ ME ++ KLTS+HFYAW G+KTGMYYLRT+AA DAIKFT+D S
Sbjct: 700 GYFIDQSQSLNLFMENANYSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLDNS 756
>gi|344303185|gb|EGW33459.1| hypothetical protein SPAPADRAFT_60812 [Spathaspora passalidarum
NRRL Y-27907]
Length = 845
Score = 1076 bits (2782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/775 (63%), Positives = 629/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPVRFDKITAR+++L YGL +H D V + Q+V +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLDPQHVDAVAITQRVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T +S+ K++Y Y N ++G + +++ +
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTIKQYSQVSKELYEYINPKTGLHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II+KNA L+ AI+YDRDF ++YFGFKTLERSYLL+++ +V ERPQH+LMRV++GIH
Sbjct: 121 YDIIVKNADELNSAIVYDRDFSYNYFGFKTLERSYLLRINGKVAERPQHLLMRVAIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +++Y++MSQ +FTH +PTLFNAGTP PQ+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 DDIPRVIESYNMMSQKYFTHGSPTLFNAGTPSPQMSSCFLVAMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIRA+GSYI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRATGSYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV +G+W+LF P++A GL
Sbjct: 301 LEPWHADIFDFIDIRKNSGKEEIRARDLFPALWIPDLFMKRVEQNGEWTLFSPNEAPGLP 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EGR + A+KLW+ IL +Q ETGTP+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGDEFEELYERYEREGRGVKTVKAQKLWYSILEAQTETGTPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+E AVCNLASIALP +V +D + +
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFVE----------------KDENHSWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FE+L EVTK++T NLN++ID N+YP+ R SN+R+RP+ +G+QGLAD F+ L LPF+S
Sbjct: 465 NFEKLHEVTKVVTRNLNRVIDRNYYPVPEARNSNMRNRPVALGVQGLADAFMALRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ A+++S ELA ++GPY TY GSP SKG+LQ D+W P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVESSVELAQEEGPYPTYEGSPASKGLLQFDLWERKPTELWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ I+K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +VN L
Sbjct: 585 DTLKQKIAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPFL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W+ A+K+ II NGS+ + +P+ELK +YKTVWEI QK ++DMAADR Y
Sbjct: 645 LRDLVDLGIWNEAMKSNIIANNGSIQSLPNVPDELKELYKTVWEISQKHIIDMAADRAAY 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQSQSLNIH+++P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V
Sbjct: 705 IDQSQSLNIHIKEPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKKV 759
>gi|86134367|ref|ZP_01052949.1| ribonucleoside-diphosphate reductase large subunit [Polaribacter
sp. MED152]
gi|85821230|gb|EAQ42377.1| ribonucleoside-diphosphate reductase large subunit [Polaribacter
sp. MED152]
Length = 799
Score = 1075 bits (2781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/820 (63%), Positives = 641/820 (78%), Gaps = 31/820 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDG+KEPV FDKITAR+KK+ YGL+K DPV VA +V G+Y GVTT++LD LA
Sbjct: 1 MYVVKRDGKKEPVMFDKITARVKKMCYGLNK-IVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA LA R+AVSNLHK TK SFSET+ D+Y Y N R+ KKA L+ADDV
Sbjct: 60 AETAATMTTAHPDYAKLAARIAVSNLHKNTKKSFSETMDDLYFYVNPRTEKKAPLLADDV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEII NA LD IIY+RDF++DYFGFKTLERSYLLK++ ++ ERPQHMLMRVS+GIHK
Sbjct: 120 YEIIKANAEKLDSTIIYNRDFNYDYFGFKTLERSYLLKLNGQIAERPQHMLMRVSIGIHK 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D A+ TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL M+DDSIEGIYDTLK+ A
Sbjct: 180 NDIDEAIATYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLQMQDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLS+HNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSLHNIRATGSYIAGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FLDL+KN GKEE RARDLFYA+W+ DLFM+RV++DG+W+L CP + L
Sbjct: 300 LEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWISDLFMKRVQEDGEWTLMCPHECPHLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G EFE LY+ YE G+ + I AR+LW +IL SQIETGTPYML+KD+ NRK+NQ+NL
Sbjct: 360 DTYGEEFERLYTSYEAAGKGRKTIKARELWEKILESQIETGTPYMLYKDAVNRKTNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+++ +E AVCNLASIALP +V E R++ + F
Sbjct: 420 GTIRSSNLCTEIMEYTAKDEVAVCNLASIALPMFVSE---------------RENGEKYF 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ ++L +VTK +T NL+ +ID N YP++ SN RHRP+G+GIQGLADTFI L LPF S
Sbjct: 465 NHKKLFDVTKKVTRNLDTVIDANFYPVKEAENSNFRHRPVGLGIQGLADTFINLRLPFTS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA++LN+DIFET+YY A+ +S E+A PY T+ GSPMS+G Q +MW + S
Sbjct: 525 DEAKKLNQDIFETMYYAAVTSSMEIAKAKEPYSTFKGSPMSEGEFQFNMWGVNDNELSGN 584
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW LR+ + K GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 585 WDWDKLRKNVMKYGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 644
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL ELGLW + +K I+ NGS+ I EIP EL+ +YKTVWE+ K ++DMA R
Sbjct: 645 KHLLEDLVELGLWDNDMKESIMRANGSIQHIEEIPSELRELYKTVWEMSMKDIIDMARHR 704
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD----T 773
G +IDQSQSLN+ ++ PD+GKLTS+HFYAW G+KTGMYYLRT++A +AI+FTV
Sbjct: 705 GYFIDQSQSLNLFLKDPDYGKLTSMHFYAWKSGLKTGMYYLRTKSAVNAIQFTVSKEKKA 764
Query: 774 SVLNNEKANRADNDVEANLAQVVCSLKN---QEECMACGS 810
V+ EK A +V + K ++C+ CGS
Sbjct: 765 EVIEEEKPM-----TPAEFKAMVDASKGAGPDDDCLMCGS 799
>gi|365987435|ref|XP_003670549.1| hypothetical protein NDAI_0E04890 [Naumovozyma dairenensis CBS 421]
gi|343769319|emb|CCD25306.1| hypothetical protein NDAI_0E04890 [Naumovozyma dairenensis CBS 421]
Length = 915
Score = 1075 bits (2781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/785 (62%), Positives = 625/785 (79%), Gaps = 15/785 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPV+FDKITAR+ +L YGL D V V Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVKFDKITARISRLCYGLDPARIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS I+++++Y N +GK A ++++DV
Sbjct: 61 AETCAYMTTVHPDYATLAARLAISNLHKQTTKQFSTVIQNLHDYINPATGKHAPMISEDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M N L+ +I+YDRDF F+YFGFKTLERSYLL+++ +V ERPQH++MRV++GIH
Sbjct: 121 YSIVMDNKDELNSSIVYDRDFQFNYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +AL+TY+LMS +F HA+PTLFNAGTP+PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 RDIKAALETYNLMSLRYFIHASPTLFNAGTPKPQMSSCFLVAMKDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+++RKN GKEE RARDLF ALW+PDLFM+RV +G+W+LF PS A GL+
Sbjct: 301 LEPWHADIFDFIEIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGQWTLFSPSSAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE EGR K I A+KLW+ IL +Q ETGTP++L+KD+CN KSNQ+NL
Sbjct: 361 DCYGEEFEELYTRYEREGRGK-TIKAQKLWYSILEAQTETGTPFILYKDACNEKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+ETAVCNLAS+ALP ++ S D K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E++K+IT NLN++ID N+YP+ R SN+RHRPI +G+QGLADT++LL +PFES
Sbjct: 466 NFKKLHEISKVITRNLNRVIDRNYYPVPEARNSNMRHRPIALGVQGLADTYMLLRMPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LNK IFETIY+ +L+AS ELA KDGPY + SP +KGILQ+DMWN P WDW
Sbjct: 526 DEAKILNKQIFETIYHASLEASCELAQKDGPYLNFEDSPSAKGILQMDMWNQKPFGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR I K G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 DTLRNDIRKYGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W +K II ENGS+ + +P+ELK +YKT+WEI QKT++DMAADR Y
Sbjct: 646 LRDLVDLGIWDDGMKQHIITENGSIQNLPNVPDELKKLYKTIWEISQKTIIDMAADRSIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS S+N+ + P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D ++ +
Sbjct: 706 IDQSHSMNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQAIADKAA 765
Query: 781 ANRAD 785
+N AD
Sbjct: 766 SNIAD 770
>gi|126662514|ref|ZP_01733513.1| ribonucleoside diphosphate reductase, alpha subunit [Flavobacteria
bacterium BAL38]
gi|126625893|gb|EAZ96582.1| ribonucleoside diphosphate reductase, alpha subunit [Flavobacteria
bacterium BAL38]
Length = 810
Score = 1075 bits (2780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/783 (64%), Positives = 627/783 (80%), Gaps = 29/783 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDG KEPV FDKIT R+KKL YGL+ + D V VA +V G+Y GVTT++LD LA
Sbjct: 1 MYVVKRDGHKEPVMFDKITDRIKKLCYGLN-DMVDAVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MTV+HPDYA LA R+A+SNLHK T SFSET+ +MY+Y N R+ ++A L++D+V
Sbjct: 60 AETAASMTVSHPDYAQLAARIAISNLHKNTNKSFSETMNEMYHYVNPRTNQEAPLISDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+I NA LD IIY RDF++DYFGFKTLERSYLL+++ ++VERPQHMLMRVSVGIH
Sbjct: 120 YEVIKANAEFLDSHIIYTRDFNYDYFGFKTLERSYLLRINGKIVERPQHMLMRVSVGIHM 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++ ++TY LMS+ +FTHATPTLFNAGTP+PQ+SSCFLL MKDDSI+GIYDTLK+ A
Sbjct: 180 NDLEAVIETYDLMSKKFFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGL+IHN+RA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLAIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LE WHADIFEFLDL+KN GKEE RARDLF+A+W DLFM+RV +D W+L CP++ L
Sbjct: 300 LETWHADIFEFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVEEDANWTLMCPNECPDLD 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ +G EFE LY+ YE +G+ + I AR+LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 NVYGDEFEALYTSYEAKGKGRKTIRARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLASI+LP +V +N F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEIAVCNLASISLPMFV--------------------ENGKF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ E L VTK +T NLNK+ID N+YP++ SN+RHRP+G+G+QGLAD FI++ LPF S
Sbjct: 460 NHELLFTVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPVGLGVQGLADAFIMMRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA+++N++IFET+Y+ A+ AS E+A ++GPY T+ GSP+SKG Q ++WNI S R
Sbjct: 520 DEAKKVNQEIFETLYFAAVTASMEMAKEEGPYSTFEGSPISKGEFQHNLWNIKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+SLR+ + NGVRNSLLVAPMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWASLRKEVMANGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL DL + GLW+ LK +I+ NGSV I IP +LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLHDLVDRGLWNETLKQEIMRHNGSVQHIDRIPADLKELYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQSLN+ M+ ++ KLTS+HFYAW G+KTGMYYLRT+AA DAIKFT LN
Sbjct: 700 GYFIDQSQSLNLFMQDANYAKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFT-----LN 754
Query: 778 NEK 780
N+K
Sbjct: 755 NDK 757
>gi|365961082|ref|YP_004942649.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
columnare ATCC 49512]
gi|365737763|gb|AEW86856.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
columnare ATCC 49512]
Length = 803
Score = 1074 bits (2777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/783 (64%), Positives = 630/783 (80%), Gaps = 29/783 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDG KEPV FDKIT R+KKL YGL+ + D V VA +V G+Y GVTT++LD LA
Sbjct: 1 MYVVKRDGHKEPVMFDKITDRIKKLCYGLN-DMVDAVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMTV HPDYA LA R+A+SNLHK TK SFSET+ DM++Y + R+GK A L++D+V
Sbjct: 60 AETAAAMTVTHPDYAQLAARIAISNLHKNTKKSFSETMNDMFHYVSPRTGKDAPLISDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++IIM+N+A LD IIY+RDF++DYFGFKTLERSYLLK++ ++ ERPQHMLMRV++GIH
Sbjct: 120 HKIIMENSAFLDSHIIYNRDFNYDYFGFKTLERSYLLKINGKIAERPQHMLMRVAIGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +SA++TY LMS+ +FTHATPTLFNAGTP+PQ+SSCFLL M+DDSI+GIYDTLK+ A
Sbjct: 180 NDLESAIETYELMSKKFFTHATPTLFNAGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+E WHADI +FLDL+KN GKEE RARDLFYA+W DLFM+RV D KW+L CP++ GL
Sbjct: 300 IETWHADIMDFLDLKKNHGKEEMRARDLFYAMWTSDLFMKRVESDDKWTLMCPNECPGLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE E R + I AR+LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 DVYGDEFEALYTKYENEARGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++S +E AVCNLAS++LP +V E F
Sbjct: 420 GTIRSSNLCTEIMEYTSADEIAVCNLASLSLPMFVDEGK--------------------F 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ E L +VTK +T NLNK+ID N+YP++ SN+RHRPIG+G+QGLAD FI+L +PF S
Sbjct: 460 NHELLYKVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
+A++LN++IFET+Y+ A++ S E+A ++GPY T+ GSP+S+G Q ++W +T S R
Sbjct: 520 DDAKKLNQEIFETMYFAAVETSMEMAKEEGPYSTFKGSPISEGQFQYNLWGVTDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+SLR+ + + GVRNSLL+APMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWASLRKEVIEYGVRNSLLMAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL + GLW+ LK +I+ NGSV I IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVKCGLWNEDLKQEIMRHNGSVQNIDRIPQDLKDLYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQSLN+ ME KLTS+HFYAW G+KTGMYYLRT+AA DAIKFT LN
Sbjct: 700 GYFIDQSQSLNLFMEGATFSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFT-----LN 754
Query: 778 NEK 780
NEK
Sbjct: 755 NEK 757
>gi|398389296|ref|XP_003848109.1| hypothetical protein MYCGRDRAFT_101786 [Zymoseptoria tritici
IPO323]
gi|339467983|gb|EGP83085.1| hypothetical protein MYCGRDRAFT_101786 [Zymoseptoria tritici
IPO323]
Length = 916
Score = 1073 bits (2776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/782 (63%), Positives = 624/782 (79%), Gaps = 18/782 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + KV +GVY+GVTT QLD+LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDSAAITMKVISGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA+LA R+AVSNLHK TK FS + D+Y+Y N ++ K A +++D+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSAVVSDLYHYINPKTNKAAPMISDET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y +MK+A L+ AI+YDRDF++ YFGFKTLERSYLL+++ +V ERPQ M+MRV+VGIH
Sbjct: 121 YATVMKHADELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +SA++TY+ MS +FTHA+PTLF+AGTP QL+SCFL+ MKDDSI+GIYDTLK CA+
Sbjct: 181 EDIESAIETYNYMSNKYFTHASPTLFSAGTPNAQLASCFLIDMKDDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA+G+YI GTNG+SNG+VPML+VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKNAGGIGLNVHRIRATGAYISGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHAD+F FLDLRKN GKEE RARDLFY LWVPDLFM+RV + W+L CP + GLA
Sbjct: 301 IEPWHADVFSFLDLRKNHGKEEVRARDLFYGLWVPDLFMKRVEQNTTWTLMCPHECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EG+ + + A+KLW+ IL +Q ETGTPY+L+KD+ N KSNQ+NL
Sbjct: 361 DVYGAEFEELYERYEREGKGRETVRAQKLWYAILEAQTETGTPYILYKDAANSKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+++P+E AVCNLAS+ALP YV D +N F
Sbjct: 421 GTIRSSNLCTEIIEYTAPDEVAVCNLASLALPTYV------------------DIENERF 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L +VT+ +T+NLNKII+VNHYP+ R+SN RHRPIG+G+ GLAD F+ L +PF+S
Sbjct: 463 DFEKLHQVTQTVTKNLNKIIEVNHYPVPEARKSNFRHRPIGLGVNGLADAFLALRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+QLN IFETIY+ AL AS +LA K GPYETY GSP+SKG LQ DMW +TP+D WDW
Sbjct: 523 PEARQLNIQIFETIYHAALTASCDLAAKLGPYETYEGSPVSKGELQYDMWGVTPTDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+ I+++GVRNSLLVAPMPTASTSQI+G NECFEPYTSNIY+RRVL+GEF VVN L
Sbjct: 583 AALKAKIAEHGVRNSLLVAPMPTASTSQIMGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL E GLWS +K +II + GS+ +I IP++LKA+YKTVWEI Q+ +V M+ADRG +
Sbjct: 643 LKDLVERGLWSDNMKNRIIADGGSIQRIPNIPDDLKALYKTVWEISQRHIVQMSADRGAF 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIHM++P GK+TS+HF W G+KTGMYYLRT AA+ I+FTVD +L
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEMLKVAD 762
Query: 781 AN 782
N
Sbjct: 763 TN 764
>gi|126131606|ref|XP_001382328.1| Ribonucleoside-diphosphate reductase large chain 1 [Scheffersomyces
stipitis CBS 6054]
gi|126094153|gb|ABN64299.1| Ribonucleoside-diphosphate reductase large chain 1 [Scheffersomyces
stipitis CBS 6054]
Length = 861
Score = 1073 bits (2776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/772 (63%), Positives = 630/772 (81%), Gaps = 16/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPVRFDKITAR+++L YGL H D V + Q+V +GVY GVTT +LD LA
Sbjct: 1 MYVNKRDGRKEPVRFDKITARVQRLCYGLDPNHVDAVAITQRVISGVYHGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T +S K++Y+Y N ++G + +++ +
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQYSSVSKELYDYINPKTGLHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II+K+ L+ AI+YDRDF+++YFGFKTLERSYLL+++ +V ERPQH++MRV++GIH
Sbjct: 121 YDIILKHTDELNSAIVYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + +++Y+LMSQ FTH +PTLFNAGTP PQ+SSCFL+ MKDDSI+GIYDTLK CA+
Sbjct: 181 DDIEKVIESYNLMSQRLFTHGSPTLFNAGTPSPQMSSCFLVAMKDDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIR++G+YI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV + W+LF P++A GLA
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNADWTLFSPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE E R + I A+KLW+ IL +Q ETGTP+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGDEFEELYERYERENRGRSTIKAQKLWYSILEAQTETGTPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+SSPEE AVCNLASIALP +V +D + +
Sbjct: 421 GMIKSSNLCCEIVEYSSPEEVAVCNLASIALPSFVE----------------KDDSSLWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FE+L EVTK++T+NLNKIID N+YP+ RRSN+R+RPI +G+QGLADTF+ L LPF+S
Sbjct: 465 NFEKLHEVTKVVTKNLNKIIDRNYYPVPEARRSNMRNRPIALGVQGLADTFMALRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+A++LN IFETIY+ A+++S ELA +GPYE+Y GSP SKG+LQ D+W+ P++ WDW
Sbjct: 525 QQARELNIQIFETIYHAAVESSIELAQIEGPYESYEGSPASKGLLQYDLWDRKPTELWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ +SK+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +VN +L
Sbjct: 585 DTLKQNLSKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W+ A+K II NGSV ++ +P+E+KA+YKTVWEI QK ++DMAADR +
Sbjct: 645 LRDLVDLGIWNDAMKNNIIANNGSVQGLANVPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQSLNIH++ P GKLTS+HFY W +G+KTGMYYLRT+AAA AI+FTVD
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKRGLKTGMYYLRTQAAAAAIQFTVD 756
>gi|195050620|ref|XP_001992932.1| GH13371 [Drosophila grimshawi]
gi|193899991|gb|EDV98857.1| GH13371 [Drosophila grimshawi]
Length = 821
Score = 1073 bits (2775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/829 (60%), Positives = 643/829 (77%), Gaps = 38/829 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YVIKRDGR+E + FDKIT+R++KL Y L+ + DPV + KV G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEIHFDKITSRIQKLCYNLNMDFVDPVSITLKVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA++T H DYALLA R+AVSNLHK T+ FS+ +D+Y + NK + + + +V++
Sbjct: 72 AEIAASLTTQHADYALLAARIAVSNLHKETRKVFSDVFEDLYKHINKETNEPSPMVSEFH 131
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+ K+A L+ AIIYDRDF ++YFGFKTLERSYLLK++ ++ ERPQHMLMRVS+GIH
Sbjct: 132 YNIVKKHADRLNSAIIYDRDFGYNYFGFKTLERSYLLKINHKIAERPQHMLMRVSIGIHG 191
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD D+A++TY+L+S+ +FTHA+PTLF A T +PQ+SSCFLL M DSIEGI+ ++++CA+
Sbjct: 192 DDIDAAVETYNLLSERYFTHASPTLFAAATNRPQMSSCFLLTMVSDSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H IRA G+ I GTNG+SNG+VPML+VFN+ ARYVDQGGGKR GAFAIY
Sbjct: 252 ISKAAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI EF+DL+KN GKEE RAR+LFYALW+PDLFM+RV + WSL CP GL
Sbjct: 312 LEPWHSDILEFMDLKKNTGKEEHRARELFYALWIPDLFMKRVEANEDWSLMCPHKCPGLQ 371
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG +FE LY QYE+EG+A VI A+ LWF I+ +Q+ETGTPYMLFKDSCNRKSNQQN+
Sbjct: 372 DVWGDDFEKLYVQYEKEGKANRVIKAQTLWFAIIEAQVETGTPYMLFKDSCNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+S+P+E AVCNLASIAL +V + ++ +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV-------------------TSDKTY 472
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTK +T+NLNKIID+N+YP+ ++SN RHRPIGIG+QG AD IL+ P+ES
Sbjct: 473 DFKKLKEVTKTVTKNLNKIIDINYYPLPEAKKSNFRHRPIGIGVQGFADALILMRHPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA LN+ IFETIY+ AL+AS ELA K+GPYETY GSP+SKGILQ DMW TP+D WDW
Sbjct: 533 EEAALLNQQIFETIYFGALEASCELAQKEGPYETYPGSPVSKGILQYDMWGKTPTDLWDW 592
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+SL+ I ++GVRNSLLVAPMPTAST+QI+GNNE FEPYTSNIYTRRVLSGEF VVN HL
Sbjct: 593 NSLKLSIKEHGVRNSLLVAPMPTASTAQIMGNNESFEPYTSNIYTRRVLSGEFQVVNHHL 652
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLTEL LW +K +II GS+ I IP+ ++ +YKTVWEI KT + MAADRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIIASRGSIQNIESIPKNVRDLYKTVWEISVKTTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV-------DT 773
IDQSQS NIH+ +P++GKLTS+HFY+W G+KTGMYYLRT+ AA+AI+FTV T
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVAKGSPVKQT 772
Query: 774 SVLNN----------EKANRADNDV--EANLAQVVCSLKNQEECMACGS 810
+ L+N E N +++D+ E +A VVCSL+N++ C++CGS
Sbjct: 773 NGLHNTSFVEHNDSMENGNVSESDLERERKMADVVCSLENKDACLSCGS 821
>gi|254580061|ref|XP_002496016.1| ZYRO0C08514p [Zygosaccharomyces rouxii]
gi|238938907|emb|CAR27083.1| ZYRO0C08514p [Zygosaccharomyces rouxii]
Length = 921
Score = 1073 bits (2775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/775 (63%), Positives = 615/775 (79%), Gaps = 14/775 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKEPVRFDKITAR+ KL YGL H D V + Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKEPVRFDKITARISKLCYGLDPSHIDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+AVSNLHK T FS+ I D+Y+Y N +G + +++D++
Sbjct: 61 AETCAYMTTVHPDYATLAARIAVSNLHKQTTKQFSQVISDLYHYVNPANGVHSPMISDEI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ I+M N L+ AI+YDRDF F+YFGFKTLERSYLL+++ ERPQH++MRVS+GIH
Sbjct: 121 FNIVMTNKDELNSAIVYDRDFQFNYFGFKTLERSYLLRINGLTAERPQHLIMRVSLGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D SA++TY+LMS +F HA+PTLFNAGTP PQ++SCFL+ MKDDSIEGIYD+LK+CA+
Sbjct: 181 EDIKSAIETYNLMSLRYFIHASPTLFNAGTPHPQMASCFLVAMKDDSIEGIYDSLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV + +W+LF PS+A GLA
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEKNEEWTLFSPSEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EGR + I A+KLW+ IL +Q ETGTP+ML+KD+CN KSNQ+NL
Sbjct: 361 DVYGEEFEKLYERYEQEGRGRKTIRAQKLWYAILEAQTETGTPFMLYKDACNEKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S +ETA CNLASIALP V S D K + +
Sbjct: 421 GVIKSSNLCCEIVEYSDKDETAACNLASIALPSCVEV--------------SADGKEQWY 466
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
F +L EV K IT NLNK+ID N+YP+ +RSN+RHRPI +G+ GLADTF++L LPFES
Sbjct: 467 SFAKLHEVAKAITRNLNKVIDRNYYPVPEAKRSNMRHRPIALGVNGLADTFMMLRLPFES 526
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA+ LN+ IFETIY+ AL+ S ELA G Y TY GSP+S+G+LQ D+W PS+ WDW
Sbjct: 527 PEAKILNQQIFETIYHGALEQSCELAKIHGTYSTYEGSPISQGLLQFDLWEKNPSELWDW 586
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LR+ I ++GVRNSLLVAPMPTASTSQILG NECFEPYTSN+Y+RRVLSGEF +VN +L
Sbjct: 587 EPLRQGIKEHGVRNSLLVAPMPTASTSQILGYNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LG+W ++K +II +NGS+ I IP+E+K +YKTVWEI Q+ ++DMAADR +
Sbjct: 647 LKDLVDLGIWDESMKQQIITDNGSIQNIPNIPQEIKDLYKTVWEISQRHVLDMAADRAVF 706
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
IDQS SLNIHM P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D +V
Sbjct: 707 IDQSHSLNIHMRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKNV 761
>gi|366989059|ref|XP_003674297.1| hypothetical protein NCAS_0A13590 [Naumovozyma castellii CBS 4309]
gi|342300160|emb|CCC67917.1| hypothetical protein NCAS_0A13590 [Naumovozyma castellii CBS 4309]
Length = 860
Score = 1073 bits (2774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/785 (62%), Positives = 623/785 (79%), Gaps = 15/785 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPV+FDKITAR+ +L YGL D V V Q++ GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITARISRLCYGLDPARIDAVKVTQRIINGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ I D+++Y N +G + +++ V
Sbjct: 61 AETCAYMTTVHPDYATLAARLAISNLHKQTTKQFSQVIYDLHHYVNPANGIHSPMISKKV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+MKN L+ I+YDRDF F+YFGFKTLERSYLLK+D +V ERPQH++MRV++GIH
Sbjct: 121 YDIVMKNKDLLNSTIVYDRDFSFNYFGFKTLERSYLLKLDGKVAERPQHLIMRVALGIHL 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D DS ++TY+LMS +F HA+PTLFNAGTP+PQ+SSCFL+ MKDDSI+GI++TLK+CA+
Sbjct: 181 EDLDSVIETYNLMSLRYFIHASPTLFNAGTPKPQMSSCFLIAMKDDSIDGIFETLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+++RKN GKEE RARDLF ALWVPDLFM+RV ++G+W+LF PS A GL
Sbjct: 301 LEPWHADIFDFIEIRKNHGKEEIRARDLFPALWVPDLFMKRVEENGQWTLFSPSIAPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+EGR K I A+KLW+ IL +Q ETGTP++++KD+CNRK+NQ NL
Sbjct: 361 DVYGDEFEELYTRYEKEGRGK-TIKAQKLWYAILEAQTETGTPFVIYKDACNRKTNQSNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+SSP+ETAVCNLAS+ALP ++ S D K +
Sbjct: 420 GVIKSSNLCCEIVEYSSPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FE+L E+TK++T NLN++ID N+YP+ RSN+RHRPI +G+QGLADT+++L LPFES
Sbjct: 466 NFEKLHEITKVVTRNLNRVIDNNYYPVPEAERSNVRHRPIALGVQGLADTYMMLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA LNK IFET+Y+ +L++S ELA K+GPYET+ G P SKGILQ+DMWN P WDW
Sbjct: 526 EEATILNKQIFETMYHASLESSCELAQKEGPYETWEGCPASKGILQMDMWNAEPFGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ + K G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 DTLRKDVVKYGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W +K II +NGS+ + +P+ELK++YKT+WEI QK ++DMAADR Y
Sbjct: 646 LRDLVDLGIWDDGMKQHIITQNGSIQNLPNVPDELKSLYKTIWEISQKKIIDMAADRSIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLN+ + P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKVADQAA 765
Query: 781 ANRAD 785
N AD
Sbjct: 766 QNIAD 770
>gi|297447|emb|CAA46232.1| ribonucleotide reductase, large subunit [Schizosaccharomyces pombe]
Length = 811
Score = 1072 bits (2773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/831 (60%), Positives = 645/831 (77%), Gaps = 41/831 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL +H DPV + QKV +GVY GVTT +LD LA
Sbjct: 1 MFVYKRDGRQEKVAFDKITARVSRLCYGLDSDHVDPVEITQKVISGVYPGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T+ FS ++ +++Y N ++ K A +++D +
Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKQTEKVFSTVVQQLHDYVNPKTDKPAPMISDKI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+MK+ LD AIIYDRDF +++FGFKTLERSYLL++D +V ERPQHM+MRV+VGIH
Sbjct: 121 YDIVMKHKDELDSAIIYDRDFTYNFFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A++TY+LMSQ +FTHA+PTLFNAGTP+PQLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 EDIEAAIETYNLMSQRYFTHASPTLFNAGTPRPQLSSCFLVTMKDDSIEGIYDTLKMCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+ IHNIRA+GSYI GTNG+SNGIVPM++V+N+TARYVDQGG KR GAFA Y
Sbjct: 241 ISKTAGGIGIYIHNIRATGSYIAGTNGTSNGIVPMIRVYNNTARYVDQGGNKRPGAFAAY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+ +FL+LRK G E+ RAR +FYALW+PDLFM+RV + +W+ FCP++A GLA
Sbjct: 301 LEPWHADVMDFLELRKTHGNEDFRARQMFYALWIPDLFMQRVERNEQWTFFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EF LY +YE+E R + + A+K+W+ IL SQ+ETG P+ML+KDSCNRKSNQ+N+
Sbjct: 361 DVWGDEFVALYEKYEKENRGRRSLPAQKVWYAILQSQVETGNPFMLYKDSCNRKSNQKNV 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+SSP+E AVCNLAS+ALP ++ +D K +
Sbjct: 421 GTIRSSNLCTEIVEYSSPDEVAVCNLASVALPTFI-----------------KDGK---Y 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L +V K++T NLNKIIDVN+YP+ RRSN+RHRP+G+G+QGLAD F L LPFES
Sbjct: 461 NFQKLHDVVKVVTRNLNKIIDVNYYPVPEARRSNMRHRPVGLGVQGLADAFFALRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A++LN IFETIY+ AL+AS E+A +G YE+Y GSP +GILQ DMWN+ P+D WDW
Sbjct: 521 AGAKKLNIQIFETIYHAALEASCEIAQVEGTYESYEGSPCIQGILQYDMWNVNPTDLWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ +E I+K+G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y RRVLSGEF +VN L
Sbjct: 581 AEFKEKIAKHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL E LW+ +K K++ +GS+ I EIP++LK +YKTVWEI QKT++D AADRG +
Sbjct: 641 LKDLVERDLWNEDMKNKLVMLDGSIQAIPEIPQDLKDLYKTVWEISQKTVIDYAADRGPF 700
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL--NN 778
IDQSQSLNIH++ P +GK+TS+HFY W KG+KTGMYYLRT AA+ AIKFTVD L N
Sbjct: 701 IDQSQSLNIHLKDPSYGKITSMHFYGWKKGLKTGMYYLRTMAASAAIKFTVDPVALRARN 760
Query: 779 EKAN-----------RADNDVEANLAQV--------VCSLKNQEECMACGS 810
E++N +A+ E ++ CS+KN E C C +
Sbjct: 761 EESNEENKKPVIKNGKAEISAEPTKEEIDIYNEKVLACSIKNPEACEMCSA 811
>gi|28422346|gb|AAH46846.1| RRM1 protein, partial [Xenopus laevis]
Length = 760
Score = 1072 bits (2773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/772 (65%), Positives = 625/772 (80%), Gaps = 19/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ E DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNLEFVDPAQITMKVIQGLYSGVTTIELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA RVAVSNLHK TK FS+ ++D+YNY N + K + +V+ +
Sbjct: 61 AETAATLTTKHPDYAILAARVAVSNLHKETKKIFSDVMEDLYNYVNPLNSKHSPMVSRET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ +IIYDRDF +++FGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSSIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLLCMKDDSIEGIYDTLK+CA+
Sbjct: 181 TDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+F+FLDL+KN GKEE RARDLFYA+W+PDLFM+RV ++ WSL CP + GL
Sbjct: 301 LEPWHYDVFDFLDLKKNTGKEEQRARDLFYAMWIPDLFMKRVENNLDWSLMCPHECPGLE 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG +FE LY +YE EGR + V+ A+++W I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 EVWGDKFEELYEKYEREGRTRKVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSDKEVAVCNLASLALNMYV-------------------TPERSF 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LA+VTK+I NLNKII++N YP+ SN +HRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLADVTKVIVRNLNKIIEINFYPVPEAEYSNKKHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+AQ LNK IFETIYY AL++S ELA + GPYETY G P+SKGILQ DMWN+TP+D WDW
Sbjct: 522 EKAQMLNKQIFETIYYAALESSCELAKELGPYETYEGCPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 582 TALKEKIAKYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+KDLTE GLW+ +K +II NGS+ + +IP +LK +YKTVWEI QKT++ MAADRG +
Sbjct: 642 MKDLTEQGLWNEEMKNQIIANNGSIQNVPDIPADLKELYKTVWEISQKTVITMAADRGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++
Sbjct: 702 IDQSQSLNIHVAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLN 753
>gi|347535525|ref|YP_004842950.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
branchiophilum FL-15]
gi|345528683|emb|CCB68713.1| Ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
branchiophilum FL-15]
Length = 796
Score = 1072 bits (2773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/821 (61%), Positives = 651/821 (79%), Gaps = 36/821 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KR+G+KEPV FDKIT R+KKL YGL+ + DPV VA +V G+Y GV+TT+LD LA
Sbjct: 1 MFVVKRNGKKEPVMFDKITERVKKLCYGLN-DLVDPVKVAMRVIEGLYDGVSTTELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT+ HPDYA LA RVA+SNLHK TK SFS+T+ DMY Y N R+ + A L++D+V
Sbjct: 60 AETAASMTIAHPDYAQLAARVAISNLHKNTKKSFSDTMTDMYQYVNPRTNQAAPLLSDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y +I++NAA LD IIY RDF++DYFGFKTLERSYLLK++ ++VERPQHMLMRV+VGIH
Sbjct: 120 YRVIIENAAFLDSHIIYTRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVAVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D DS ++TY LMS+ +FTHATPTLFNAGTP+PQ+SSCFLL M+DDSI+GIYDTLK+ A
Sbjct: 180 NDLDSVIETYDLMSKKYFTHATPTLFNAGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+E WHADIFEFLDL+KN GKEE RARDLF+A+W DLFM+RV++D W+L CP++ GL
Sbjct: 300 IETWHADIFEFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVQEDAHWTLMCPNECPGLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ +G +FE LY+ YE +G+ + I AR+LW +IL SQIETGTPYML+KD+ N+KSNQ+NL
Sbjct: 360 EVYGEQFETLYTSYEIQGKGRKTIKARELWEKILESQIETGTPYMLYKDAANQKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++S +E AVCNLAS++LP +V EKG F
Sbjct: 420 GTIRSSNLCTEIMEYTSKDEIAVCNLASLSLPMFV-EKGK-------------------F 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ + L +V K +T NLNK+ID N+YP++ SN+RHRPIG+G+QGLAD FI+L LPF S
Sbjct: 460 NHKLLYKVAKRVTRNLNKVIDRNYYPVKEGENSNMRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD---R 597
EA++LN++IFET+Y+ A+ AS E+A +DG Y TY GSP+S+G+ Q ++W + +D R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEMAKEDGAYSTYEGSPISQGLFQYNLWGLQDADLSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+SLR+ + + GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWASLRKEVLQYGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL DL +LG+W+ LK +I+ +NGSV I+ IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLNDLVKLGIWTDDLKQEIMRQNGSVQNINAIPKDLKELYKTVWEMSMKDIIDMSKHR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G ++DQSQSLN+ M+ ++ KLTS+HFYAW G+KTGMYYLRT++A DAIKFT++ N
Sbjct: 700 GYFVDQSQSLNLFMQDANYAKLTSMHFYAWQSGLKTGMYYLRTKSAVDAIKFTLN----N 755
Query: 778 NEKANRADNDVEA------NLAQVVCSLKNQ--EECMACGS 810
++K A D+ + +++ KN EEC CGS
Sbjct: 756 DKKEAPATVDLHTTPIHKEDYRRMLELAKNADPEECEMCGS 796
>gi|403418237|emb|CCM04937.1| predicted protein [Fibroporia radiculosa]
Length = 958
Score = 1072 bits (2772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/742 (66%), Positives = 602/742 (81%), Gaps = 20/742 (2%)
Query: 39 VAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETI 98
+ QKV AGVY+GVTT +LD LAAETAA +T HPDYA+LA R+AVSNLHK TK +FS I
Sbjct: 117 ITQKVIAGVYQGVTTVELDNLAAETAAYLTTKHPDYAILAARIAVSNLHKETKKNFSAVI 176
Query: 99 KDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK 158
D+YNY N ++G+ A +++ Y+++M NA LD AIIYDRDF++++FGFKTLERSYLLK
Sbjct: 177 SDLYNYVNPKNGRPAGMISKQTYDVVMANAETLDSAIIYDRDFNYNFFGFKTLERSYLLK 236
Query: 159 MDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSC 218
++ R ERPQH+LMRV+VGIH D L+TYHLMS+ +FTHA+PTLFNAGTP QLSSC
Sbjct: 237 LNGRTAERPQHLLMRVAVGIHGSDITRVLETYHLMSERFFTHASPTLFNAGTPNAQLSSC 296
Query: 219 FLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQV 278
FL+CMKDDSIEGIYDTLK CA+ISK+AGGIGLSIHNIRA+GSYI GTNG SNGIVPML+
Sbjct: 297 FLVCMKDDSIEGIYDTLKNCAMISKTAGGIGLSIHNIRATGSYIAGTNGYSNGIVPMLRA 356
Query: 279 FNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLF 338
++ TARYVDQGG KR GAFAIYLEPWH DIFEFLDLRKN GKEE RARDLFYALW+PDLF
Sbjct: 357 YDATARYVDQGGNKRPGAFAIYLEPWHDDIFEFLDLRKNHGKEEVRARDLFYALWIPDLF 416
Query: 339 MERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQI 398
M+RV +GKWSLFCP++A GL + WG EFE LY +YE EGRA+ I A+KLW+ IL++QI
Sbjct: 417 MKRVEANGKWSLFCPNEAPGLHEVWGAEFETLYERYESEGRARRTIDAQKLWYAILDAQI 476
Query: 399 ETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREK 458
ETG P+ML+KD+CN KSNQ++LGTIKSSNLCTEIVE+SSP+ETAVCNLAS+ALP
Sbjct: 477 ETGNPFMLYKDACNAKSNQRHLGTIKSSNLCTEIVEYSSPDETAVCNLASVALP------ 530
Query: 459 GVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHR 518
S + G R ++F+RL +V K++T NLN+II+VN+YP+ RRSN+RHR
Sbjct: 531 --------SCIEGGR------YNFQRLHDVAKVVTFNLNRIIEVNYYPVPEARRSNMRHR 576
Query: 519 PIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGS 578
PIG+G+ GLAD F+ L +PF+SPEA++LNK IFETIY+ AL+AS E+A DGPYETY GS
Sbjct: 577 PIGVGVNGLADAFMALRMPFDSPEARELNKQIFETIYHAALEASCEIAAVDGPYETYEGS 636
Query: 579 PMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
P S+G LQ DMW +TPSD WDW+SL++ I+K+G+RNSLLVAPMPTASTSQILG NECFEP
Sbjct: 637 PASRGELQYDMWGVTPSDLWDWASLKDKIAKHGLRNSLLVAPMPTASTSQILGYNECFEP 696
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
YTSNIYTRRVL+GEF +V LL++L + LW +K +II NGSV IS IP+++KAI
Sbjct: 697 YTSNIYTRRVLAGEFQIVCPWLLRELVDRKLWDDEMKNQIIANNGSVQNISGIPDDIKAI 756
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
YKTVWEI QK ++DMAADRG +I QSQSLN+H++ P +LTS+HFY W KG+KTGMYYL
Sbjct: 757 YKTVWEISQKKVLDMAADRGAFICQSQSLNVHLQSPTTPQLTSMHFYGWKKGLKTGMYYL 816
Query: 759 RTRAAADAIKFTVDTSVLNNEK 780
RTR AA AI+FTVD +L +
Sbjct: 817 RTRPAAQAIQFTVDQGMLKKSQ 838
>gi|365981623|ref|XP_003667645.1| hypothetical protein NDAI_0A02440 [Naumovozyma dairenensis CBS 421]
gi|343766411|emb|CCD22402.1| hypothetical protein NDAI_0A02440 [Naumovozyma dairenensis CBS 421]
Length = 852
Score = 1072 bits (2772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/784 (62%), Positives = 621/784 (79%), Gaps = 15/784 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGRKEPV+FDKITAR+ +L YGL D V V Q++ +GVY GVTT +LD LA
Sbjct: 1 MFVIKRDGRKEPVQFDKITARISRLCYGLDPNRVDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ I D+++Y N +G + +++ V
Sbjct: 61 AETCAYMTTVHPDYATLAARLAISNLHKQTTKRFSQVIYDLHHYVNPLNGIPSPMISKKV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+M N LD +I+YDRDF F+YFGFKTLERSYLLK+D +V ERPQH++MRV++GIH
Sbjct: 121 YDIVMANKDLLDSSIVYDRDFSFNYFGFKTLERSYLLKLDGKVAERPQHLIMRVALGIHL 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +S LKTY+LMS +F HA+PTLFNAGTP+PQ+SSCFLL MK+DSI+GI++TLK+CA+
Sbjct: 181 DDMESVLKTYNLMSMRYFIHASPTLFNAGTPRPQMSSCFLLAMKEDSIDGIFETLKECAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHN+RA+GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNVRATGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+++RKN GKEE RARDLF ALW+PDLFM+RV ++G+W+LF PSDA GL
Sbjct: 301 LEPWHADIFDFIEIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGQWTLFSPSDAPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF LY +YE EG K I A+KLW+ IL +Q ETGTP++++KD+CN K+NQ+NL
Sbjct: 361 DVYGNEFVELYERYEREGLGK-TIKAQKLWYAILEAQTETGTPFIIYKDACNEKTNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+SSP+ETAVCNLAS+ALP ++ S D K +
Sbjct: 420 GVIKSSNLCCEIVEWSSPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FE+L E++K++T NLN++ID N+YP+ RSN+RHRPI +G+QGLADT++LL LPFES
Sbjct: 466 NFEKLHEISKVVTYNLNRVIDNNYYPVPEAERSNVRHRPIALGVQGLADTYMLLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A LNK IFET+Y+ +L+AS ELA KDGPYET+ GSP S+GILQ+DMW+ P WDW
Sbjct: 526 EGASLLNKQIFETMYHASLEASCELAQKDGPYETFQGSPASEGILQMDMWDQEPLGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 ETLRKDIVKYGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W +K II ENGS+ + +P ELKA+YKTVWEI QK ++DMAADR Y
Sbjct: 646 LRDLVDLGIWDEGMKQHIITENGSIQNLPNVPAELKALYKTVWEISQKKIIDMAADRSIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLN+ + P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D +V +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQAVADKAA 765
Query: 781 ANRA 784
+N A
Sbjct: 766 SNIA 769
>gi|298711866|emb|CBJ32887.1| ribonucleotide reductase large chain subunit [Ectocarpus
siliculosus]
Length = 797
Score = 1072 bits (2771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/778 (64%), Positives = 630/778 (80%), Gaps = 20/778 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGRKE V FDKITAR+ L YGL ++ +P L+AQKV +GVY GVTT++LDELA
Sbjct: 1 MFVIKRDGRKETVSFDKITARISHLCYGLDPKYVEPTLIAQKVISGVYPGVTTSELDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+TAA HPD +LLA R++VSNLHK T +FS+TI+ ++ Y ++G+++SL++D+V
Sbjct: 61 AQTAAYQATQHPDMSLLAARISVSNLHKCTWKTFSKTIEMLHTYVLPQTGERSSLISDEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ I+M+N LD AI +RDF++DYFGFKTLE+SYLL+ + VVER QHMLMRV++GIH+
Sbjct: 121 FRIVMENKEVLDSAIQDERDFEYDYFGFKTLEKSYLLRANGFVVERIQHMLMRVAIGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA+++Y LMSQ FTHA+PTLFNAGTP+PQLSSCFLL +K+DSIEGIYDTLK+CA
Sbjct: 181 TDIDSAIESYDLMSQRLFTHASPTLFNAGTPRPQLSSCFLLNVKEDSIEGIYDTLKQCAC 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+SIH+IRA+ SY+ G+NGSSNG+VPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISKFAGGIGVSIHSIRATDSYVAGSNGSSNGLVPMLRVFNDTARYVDQGGGKRKGSFAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
EPWHADIF FLDLRKN G E RARDLFYALW+PDLFM+RV DG WSLFCP++A GL
Sbjct: 301 REPWHADIFAFLDLRKNHGNELERARDLFYALWIPDLFMKRVEADGDWSLFCPNEAPGLP 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY YE +G A+ I AR+LW I+++Q+ETGTPYMLFKD+CN KSNQ+NL
Sbjct: 361 DVFGDEFEALYKSYEAKGLARRSIKARQLWVAIMDAQVETGTPYMLFKDACNSKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVR--EKGVPVQSNVSKLVGSRDSKNR 478
GTIKSSNLCTEI+E++ P+E AVCNLASI+LP +V E G P
Sbjct: 421 GTIKSSNLCTEIIEYTDPDEVAVCNLASISLPAFVSAGEDGQPA---------------- 464
Query: 479 LFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
FDF RL EVTK++T NLN++IDVN YP+E +RSN RHRP+G+G+QGLAD FI++ PF
Sbjct: 465 -FDFHRLYEVTKVVTRNLNRVIDVNFYPVEEAKRSNFRHRPVGLGVQGLADAFIMMRFPF 523
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW 598
ES +A +LN+DIFETIY+ A++AS ELA K G YETY GSP S+G+LQ DMW +TPSDRW
Sbjct: 524 ESEKAAKLNRDIFETIYFGAVEASVELAEKQGTYETYEGSPASQGLLQYDMWGVTPSDRW 583
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
DW+ L+ ++++G+RNSLL+APMPTAST+QILGNNE EP+TSN+Y RRVL+GEF VVNK
Sbjct: 584 DWAGLKAKMAQHGLRNSLLLAPMPTASTAQILGNNESVEPFTSNMYNRRVLAGEFAVVNK 643
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
HLL+DLT GLW+ +++ +II + GSV ++ +IP++LK +YKTVWEIKQK ++DM+ADRG
Sbjct: 644 HLLRDLTTRGLWTPSVRNQIIADQGSVQRV-DIPQDLKDLYKTVWEIKQKVVIDMSADRG 702
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
+I QSQS+N+HM P GKLTS+HFY+W KG+KTGMYYLRT+ A AI+FTVD L
Sbjct: 703 AFICQSQSMNVHMADPTQGKLTSMHFYSWKKGLKTGMYYLRTKPKAHAIQFTVDQESL 760
>gi|319953270|ref|YP_004164537.1| ribonucleoside-diphosphate reductase subunit alpha [Cellulophaga
algicola DSM 14237]
gi|319421930|gb|ADV49039.1| ribonucleoside-diphosphate reductase, alpha subunit [Cellulophaga
algicola DSM 14237]
Length = 825
Score = 1070 bits (2766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/777 (63%), Positives = 622/777 (80%), Gaps = 24/777 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGRKEP+ FDKITAR++KL YGL+ E DP+ V+ +V G+Y GVTT++LD LA
Sbjct: 1 MYVLKRDGRKEPMMFDKITARVRKLCYGLN-ELVDPIKVSMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE +A MT HPD+A LA R++VSNLHK TK SF++T+KD+Y Y N R+GKK+ L++D+V
Sbjct: 60 AEISATMTTTHPDFAKLAARISVSNLHKNTKKSFADTMKDLYEYVNPRNGKKSPLLSDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++I +NAA LD IIY+RDF +DYFGFKTLERSYLLK++ ++ ERPQHMLMRVSVGIH
Sbjct: 120 FKVISENAAFLDSTIIYNRDFGYDYFGFKTLERSYLLKINGQIAERPQHMLMRVSVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD ++ ++TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL MKDDSI+GIYDTLK+ A
Sbjct: 180 DDLEAVVETYELMSKKFFTHATPTLFNSGTPKPQMSSCFLLAMKDDSIDGIYDTLKQTAQ 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPMLQVFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLQVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADI+EFLDL+KN GKEE RARDLFYA+W+PDLFM RV + +W+L CP++ L
Sbjct: 300 VEPWHADIYEFLDLKKNHGKEEMRARDLFYAMWIPDLFMRRVEANEEWTLMCPNECPDLF 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
FE +Y +YE E + + + AR LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 KHHSEVFETMYLKYEAENKGRKTVKARDLWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLASIALP ++ KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFI--------------------KNGEF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L VTK +T NLNK+ID N+YP++ SN+RHRPIG+G+QGLAD FI+L LPF S
Sbjct: 460 DHKELFRVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
A+ LN++IFET+Y+ A+ AS E+A ++GPY +Y GSP+S+G Q ++W I S R
Sbjct: 520 DAAKALNQEIFETLYFAAVTASMEMAKEEGPYSSYEGSPISEGEFQYNLWGIKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW LR+ + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWDKLRKEVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL LGLW+ +LK +++ NGS+ I IP+++K +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVHLGLWNESLKQELMRANGSIQHIDIIPQDIKELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
G +IDQSQSLN+ ME + KLTS+HFYAW G+KTGMYYLRT++A DAIKFT+D +
Sbjct: 700 GYFIDQSQSLNLFMEGANFSKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLDNT 756
>gi|354546793|emb|CCE43525.1| hypothetical protein CPAR2_211690 [Candida parapsilosis]
Length = 866
Score = 1070 bits (2766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/784 (62%), Positives = 633/784 (80%), Gaps = 16/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPVRFDKITAR+++L YGL H +PV + QKV AGVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRKEPVRFDKITARVQRLCYGLDSNHVEPVAITQKVIAGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T +S+ KD+Y Y N + A +++ +
Sbjct: 61 AETAATMTTIHPDYAVLAARIAVSNLHKQTIKLYSQVSKDLYEYINPETNLHAPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II +NA L+ AI+YDRDF+++YFGFKTLERSYLL+++ +V ERPQH++MRV++GIH
Sbjct: 121 YDIIQENADELNSAIVYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++TY+LMSQ +FTH +P LFNAGTP+PQ+SSCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 RDIPRVIETYNLMSQRYFTHGSPCLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIR++G+YI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+++RKN GKEE RARDLF ALW+PDLFM+RV +G W+LF P++A LA
Sbjct: 301 LEPWHADIFDFIEIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPNLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G EF LY +YE+EGR + I A+KLW+ IL +Q ETGTP+ML+KD+CN KSNQ+NL
Sbjct: 361 DTYGDEFVELYEKYEKEGRGRKTIKAQKLWYSILEAQTETGTPFMLYKDACNTKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+E AVCNLASIALP ++ + D K+ +
Sbjct: 421 GVIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFIEQ----------------DGKHAWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L +VTK++T NLN++ID N+YP+ RSN+RHRPI +G+QGLAD F++L + F+S
Sbjct: 465 NFDKLHDVTKVVTRNLNRVIDRNYYPVPEAERSNMRHRPIALGVQGLADAFMVLRIGFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ A++AS ELA ++GPYETY GSP S+G+LQ D+WN P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASIELAAEEGPYETYQGSPASQGLLQYDLWNRKPTELWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +VN +L
Sbjct: 585 DELKEKLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LG+W+ A+K+ II NGS+ + IP+E+KA+YKTVWEI QK ++DMA+DR +
Sbjct: 645 LKDLVDLGIWNDAMKSSIISNNGSIQALPNIPDEIKALYKTVWEISQKHIIDMASDRAAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH++ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D ++ +
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKAIAESAG 764
Query: 781 ANRA 784
N A
Sbjct: 765 LNVA 768
>gi|381187135|ref|ZP_09894700.1| ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Flavobacterium frigoris PS1]
gi|379650745|gb|EIA09315.1| ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Flavobacterium frigoris PS1]
Length = 808
Score = 1069 bits (2765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/783 (63%), Positives = 631/783 (80%), Gaps = 30/783 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDG KEPV FDKIT R+KKL YGL+ E DPV VA +V G+Y GV+T++LD LA
Sbjct: 1 MYVVKRDGHKEPVMFDKITDRIKKLCYGLN-ELVDPVKVAMRVIEGLYDGVSTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT+ HPDYA LA R+A+SNLH T SFSET+ +MY+Y N R+G+ A L++++V
Sbjct: 60 AETAASMTIAHPDYAQLAARIAISNLHSNTTKSFSETMNEMYHYVNPRNGQDAPLLSEEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++I +NA LD IIY+RDF++DYFGFKTLERSYLLK++ ++VERPQHMLMRVSVGIH
Sbjct: 120 HKVIQENAEFLDSHIIYNRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +S L+TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL M+DDSI+GIYDTLK+ A
Sbjct: 180 DDLESVLETYDLMSKKFFTHATPTLFNSGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGG+GLSIHN+RA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGVGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+E WHADIF+FLDL+KN GKEE RARDLF+A+W DLFM+RV++DG W+L CP++ GL
Sbjct: 300 IETWHADIFDFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVQEDGNWTLMCPNECPGLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE +Y+ YE+ G+ + I A +LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 DVYGEEFEKMYTDYEKAGKGRKTIKAHELWEKILESQIETGTPYMLYKDAVNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLAS++LP +V N F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASLSLPMFV--------------------DNGKF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D E L VTK +T NLNK+ID N+YP++ SN+RHRPIG+G+QGLAD FI+L LPF S
Sbjct: 460 DHESLYTVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
A++LN++IFET+Y+ A+ AS E+A ++GPY ++ GSPMS+G Q ++W + S R
Sbjct: 520 DAAKKLNQEIFETLYFAAVTASMEMAKEEGPYSSFKGSPMSQGEFQYNLWGMKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+SLR+ + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWASLRKEVMEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL DL ELGLW+ +K +++ NGSV + +IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLHDLVELGLWNETMKQELMRNNGSVQDL-DIPQDLKELYKTVWEMSMKDIIDMSRQR 698
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G ++DQSQSLN+ M+ ++ KLTS+HFYAW G+KTGMYYLRT+AA DAIKFT LN
Sbjct: 699 GYFVDQSQSLNLFMQNANYSKLTSMHFYAWQSGLKTGMYYLRTKAAVDAIKFT-----LN 753
Query: 778 NEK 780
N+K
Sbjct: 754 NDK 756
>gi|85817070|gb|EAQ38254.1| ribonucleoside-diphosphate reductase large chain [Dokdonia
donghaensis MED134]
Length = 874
Score = 1069 bits (2765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/774 (64%), Positives = 621/774 (80%), Gaps = 24/774 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+EPV FDKITAR+KKL Y LS + DPV ++ +V G+Y GVTT++LD LA
Sbjct: 1 MYVVKRDGRQEPVMFDKITARVKKLCYELS-DFVDPVKISMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT +HPDYA LA R++VSNLHK TK SFSE + D+Y Y N R+GKKA +VAD+V
Sbjct: 60 AETAASMTTSHPDYAKLAARISVSNLHKNTKKSFSEVMTDLYQYVNPRTGKKAPMVADEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++IM N LD IIY+RDF +DYFGFKTLERSYLLK++ ++ ERPQHMLMRVS+GIH
Sbjct: 120 YKVIMDNKDELDSTIIYNRDFGYDYFGFKTLERSYLLKINGQIAERPQHMLMRVSIGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A +TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL MKDDSIEGIYDTLK+ A
Sbjct: 180 NDLEAAKETYMLMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA G+YI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNIRAKGAYIGGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FLDL+KN G EE RARDLFYA+W+ DLFM+RV++DGKW+L CP++ L
Sbjct: 300 MEPWHADIFDFLDLKKNHGAEEMRARDLFYAMWISDLFMKRVQEDGKWTLMCPNECPDLF 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ G EFE LY++YE+E R + I AR+LW +I+ SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 NVHGEEFEALYTKYEQEERGRRTIKARELWEKIMESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++S +E AVCNLASIALP +V KN F
Sbjct: 420 GTIRSSNLCTEILEYTSEDEVAVCNLASIALPMFV--------------------KNGAF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +T T+NLNK+ID N+YP+ SN+RHRPIG+G+QGLADTFI L LPF S
Sbjct: 460 DHQELYNITVRATKNLNKVIDRNYYPVIEAENSNMRHRPIGLGVQGLADTFIKLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA++LN++IFET+Y+ A+ AS ++A +GPY+++ GSP+S+G Q ++WNI S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASKDMAKVEGPYQSFEGSPISQGEFQYNLWNIKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+SLR+ + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWASLRKEVMEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL+DL L LW+ LK I+ NGS+ I IP +LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVALNLWNDDLKAAIMRANGSIQGIDVIPADLKELYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
G +IDQSQSLN+ ME + KLTS+HFYAW G+KTGMYYLRT++A DA KFT+
Sbjct: 700 GYFIDQSQSLNLFMEGANFAKLTSMHFYAWQSGLKTGMYYLRTKSAVDAKKFTL 753
>gi|260061081|ref|YP_003194161.1| ribonucleoside-diphosphate reductase large chain [Robiginitalea
biformata HTCC2501]
gi|88785213|gb|EAR16382.1| probable ribonucleoside-diphosphate reductase large chain
[Robiginitalea biformata HTCC2501]
Length = 812
Score = 1069 bits (2764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/763 (65%), Positives = 615/763 (80%), Gaps = 24/763 (3%)
Query: 15 FDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDY 74
FDKITAR++KL YGLS + DPV VA +V G+Y GVTT++LD LAAE AA +T HPDY
Sbjct: 2 FDKITARVRKLCYGLS-DLVDPVKVAMRVIEGLYDGVTTSELDNLAAEIAATLTTTHPDY 60
Query: 75 ALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGA 134
A LA R++VSNLHK TK SFSET+KD+Y Y N R+GKKA LVADDV+E+I K+A LD
Sbjct: 61 AKLAARISVSNLHKNTKKSFSETMKDLYEYVNPRTGKKAPLVADDVFEVIQKHADTLDSM 120
Query: 135 IIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMS 194
IIY+RDF +DYFGFKTLERSYLLK++ ++VERPQHMLMRVSVGIH DD D+ +TY LMS
Sbjct: 121 IIYNRDFGYDYFGFKTLERSYLLKLNGKIVERPQHMLMRVSVGIHLDDLDAVRETYELMS 180
Query: 195 QHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHN 254
+ +FTHATPTLFN+GTP+PQ+SSCFLL M+DDSI+GIY+TLK+ A IS+SAGGIGLSIHN
Sbjct: 181 KKYFTHATPTLFNSGTPKPQMSSCFLLAMQDDSIDGIYNTLKQTAKISQSAGGIGLSIHN 240
Query: 255 IRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDL 314
IRA+GSYI GTNG+SNG+VPML+VFNDTARYVDQGGGKRKG+FAIYLEPWHADIF+FL+L
Sbjct: 241 IRATGSYIAGTNGTSNGLVPMLRVFNDTARYVDQGGGKRKGSFAIYLEPWHADIFDFLEL 300
Query: 315 RKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQY 374
+KN GKEE RARDLFYA+W+ DLFM+RV D +W+L CP++ GL + EFE LY +Y
Sbjct: 301 KKNHGKEEMRARDLFYAMWISDLFMKRVEADAEWTLMCPNECPGLYTTHSEEFEELYLKY 360
Query: 375 EEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVE 434
E+EG+ + I AR+LW +IL SQIETGTPYML+KD+ NRKSNQ+NLGTI+SSNLCTEI+E
Sbjct: 361 EKEGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNLGTIRSSNLCTEILE 420
Query: 435 FSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITE 494
+++ +E AVCNLASIALP ++ KN FD + L VTK +T+
Sbjct: 421 YTAEDEVAVCNLASIALPMFI--------------------KNGEFDHKELFRVTKRVTK 460
Query: 495 NLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETI 554
NLN++ID N+YPI+ SN+RHRPIG+G+QGLADTFILL LPF S EA++LN++IFET+
Sbjct: 461 NLNRVIDRNYYPIKEAENSNMRHRPIGLGVQGLADTFILLRLPFTSDEAKKLNREIFETL 520
Query: 555 YYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDRWDWSSLREMISKNG 611
YY A AS E+A ++GPY +Y GSP+S+G Q ++W I S RWDW LR+ I KNG
Sbjct: 521 YYAAATASMEMAKEEGPYSSYEGSPISQGQFQHNLWGIEDKELSGRWDWEKLRKSIKKNG 580
Query: 612 VRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWS 671
VRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL+DL LGLW+
Sbjct: 581 VRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLEDLVSLGLWN 640
Query: 672 HALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHM 731
+K +++ NGS+ I IP+ +K +Y+TVWE+ K ++DM+ RG +IDQSQSLN+ M
Sbjct: 641 ENMKQELMRANGSIQHIDAIPDNIKELYQTVWELSMKDIIDMSRQRGYFIDQSQSLNLFM 700
Query: 732 EQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
E ++ KLTS+HFYAW G+KTGMYYLRT+AA DAIKFT+D +
Sbjct: 701 ENANYAKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLDNT 743
>gi|66810005|ref|XP_638726.1| ribonucleotide reductase large subunit [Dictyostelium discoideum
AX4]
gi|74854399|sp|Q54Q71.1|RIR1_DICDI RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|60467345|gb|EAL65376.1| ribonucleotide reductase large subunit [Dictyostelium discoideum
AX4]
Length = 870
Score = 1069 bits (2764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/785 (63%), Positives = 627/785 (79%), Gaps = 16/785 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLK---KLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLD 57
MYV+KRDG KE V FDKIT+R+ ++ L+ + DP+ VAQKV +GV+ GV TT+LD
Sbjct: 16 MYVVKRDGTKENVSFDKITSRISFLCEMEPKLNSDIVDPIEVAQKVVSGVFPGVKTTELD 75
Query: 58 ELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVA 117
LAAETAA M+ HPDY +LA R++VSNLHK T SF ET+K Y + N +S A LV+
Sbjct: 76 NLAAETAAYMSTRHPDYGILAARISVSNLHKQTSKSFVETVKKQYEFINPKSNLLAPLVS 135
Query: 118 DDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
++YEI+MK+ L+ I Y RDFD+D+FGFKTLERSYL +++ ++VERPQHMLMRVS+G
Sbjct: 136 KELYEIVMKHGERLESVIDYYRDFDYDFFGFKTLERSYLHRINGKIVERPQHMLMRVSIG 195
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
IH +D +SA+ TY +S+ FTHATPTLFNAGTP PQ+SSCFL+ MK+DSI+GIYDTLK+
Sbjct: 196 IHGEDLESAINTYKRLSEKLFTHATPTLFNAGTPSPQMSSCFLVQMKEDSIDGIYDTLKQ 255
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIG+++H IRA+ SYI GTNG+SNG+VPML+VFNDTARYVDQGGGKRKGAF
Sbjct: 256 CALISKSAGGIGIAVHKIRAAQSYIRGTNGTSNGLVPMLRVFNDTARYVDQGGGKRKGAF 315
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
A+YLEPWHAD+FEF+DL+KN GKEE RARDLFYALWV D+FMERV +G W+LFCP++A
Sbjct: 316 AVYLEPWHADVFEFIDLKKNTGKEEMRARDLFYALWVSDIFMERVEQNGDWALFCPNEAP 375
Query: 358 GLADSWGIEFEHLYSQYEE-EGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSN 416
GLA++ E LY +YE + VI A++LWF I+ SQ+ETGTP++L+KD+CN KSN
Sbjct: 376 GLAETHSEEHRALYLKYEATPDLPRRVIKAQELWFAIMESQVETGTPFILYKDACNAKSN 435
Query: 417 QQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSK 476
Q+NLGTI SSNLCTEI++++SP+E AVCNLASIALP++VR+K VGS D K
Sbjct: 436 QKNLGTISSSNLCTEIIQYTSPDEIAVCNLASIALPKFVRQK-----------VGSTDPK 484
Query: 477 NRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGL 536
+ FD + L E+TK+IT NLN IID N+YP+ + SNLRHRPIGIGIQGLAD FI + +
Sbjct: 485 EKEFDHQFLFEITKLITVNLNVIIDRNYYPVAEAKTSNLRHRPIGIGIQGLADVFIKMRM 544
Query: 537 PFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD 596
PF+S A +LN +I ETIY+ AL AS ELA++DG YE++ GSP SKGILQ DMWN+TPS
Sbjct: 545 PFDSVAAAKLNVEIAETIYFAALTASHELAIRDGTYESFKGSPASKGILQFDMWNVTPSS 604
Query: 597 RWDWSSLRE-MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
RW+W+ L++ +++K G+RNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +
Sbjct: 605 RWNWAELKDNIVNKGGLRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFTI 664
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VNK LL+DL ELG+WS +K +I+ GS+ I IP++LK +YKTVWEI+Q+TL+DMAA
Sbjct: 665 VNKQLLEDLMELGIWSPEMKNQIVAARGSIQSIGGIPDDLKELYKTVWEIRQRTLIDMAA 724
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
DRG +IDQSQS N+ + +P KLTS+HFY+W KG+KTGMYYLRTR AADAI+FTVD V
Sbjct: 725 DRGAFIDQSQSFNVFIAEPTFAKLTSMHFYSWKKGLKTGMYYLRTRPAADAIQFTVDPIV 784
Query: 776 LNNEK 780
K
Sbjct: 785 SQTPK 789
>gi|170038940|ref|XP_001847305.1| ribonucleoside-diphosphate reductase large subunit [Culex
quinquefasciatus]
gi|167862546|gb|EDS25929.1| ribonucleoside-diphosphate reductase large subunit [Culex
quinquefasciatus]
Length = 838
Score = 1068 bits (2763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/857 (60%), Positives = 641/857 (74%), Gaps = 66/857 (7%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKE V DKIT+R++KL YGL+ + DPV + KV G+Y GVTT +LD LA
Sbjct: 1 MYVFKRDGRKEEVHLDKITSRIQKLCYGLNMDFVDPVAITLKVINGLYTGVTTQELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T H DYA+LA R+AVSNLHK TK FS+ + D+YN N+ K+ +++D+
Sbjct: 61 AETAATLTTEHADYAILAARLAVSNLHKETKKHFSDVMADLYNMENEFLKTKSPMISDEH 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+IIM NA L+ AIIYDRDF ++YFGFKTLERSYLLK+ +VVERPQHMLMRV+VGIH
Sbjct: 121 YKIIMDNADRLNSAIIYDRDFGYNYFGFKTLERSYLLKIKGKVVERPQHMLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A++TY+L+S+ +FTHA+PT+F A T +PQLSSCFLL M DDSI+GIYDTLK+CA+
Sbjct: 181 LDIDAAIETYNLLSERYFTHASPTMFAAATRRPQLSSCFLLTMSDDSIDGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++H IRA G+YI GTNG SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVNVHCIRAKGTYIAGTNGISNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARD+FYALW+PDLFM+RV + W L CP D GL
Sbjct: 301 LEPWHGDIFEFLDLKKNTGKEEVRARDMFYALWIPDLFMKRVEANEDWCLMCPHDCPGLP 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
++WG EFE LY+ YE EGR + A+ LWF I+ SQ+ETG PYML+KD+CNRKSNQQN+
Sbjct: 361 ETWGEEFEKLYTTYENEGRYIRKVKAQDLWFAIIESQVETGVPYMLYKDACNRKSNQQNI 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+SS +E AVCNLASIA+ +V+ ++ +
Sbjct: 421 GTIKCSNLCTEIVEYSSKDEIAVCNLASIAVNMFVK-------------------PDKSY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EV+KI+T+NLNKIID+N+YP+ +RSN+RHRPIGIG+QG+AD FIL+ P+ES
Sbjct: 462 DFQKLKEVSKIVTKNLNKIIDINYYPVPEAKRSNMRHRPIGIGVQGMADAFILMRFPYES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ+LN+ IFETIYY AL+AS E+A KDG YETY G P+SKGILQ DMWN PSD WDW
Sbjct: 522 EEAQKLNQQIFETIYYGALEASCEIAEKDGTYETYDGCPVSKGILQYDMWNKAPSDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+E I+K+GVRNSLL+APMPTAST+QILGNNE FEPYTSN+Y RRVLSGEF VVN HL
Sbjct: 582 APLKEKIAKHGVRNSLLLAPMPTASTAQILGNNESFEPYTSNVYNRRVLSGEFQVVNHHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTEL LW +K KII NGS+ I EIP+ ++ +YKTVWEI KT + MAADRG +
Sbjct: 642 LKDLTELELWDDDMKNKIIASNGSIQHIDEIPKHIRELYKTVWEISVKTCIKMAADRGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN--- 777
IDQSQS NIH+ +P++GKLTS+HFY W G+KTGMYYLRT+ A +AI+FTVD L
Sbjct: 702 IDQSQSFNIHVAEPNYGKLTSIHFYGWKMGLKTGMYYLRTKPAVNAIQFTVDKVKLGQTQ 761
Query: 778 ------------------------NEKANRADNDVEA--------------------NLA 793
N +++ A D A +A
Sbjct: 762 SAQNGTTSPSKSMLMNGSSTPRKMNGESSMAMADTSAIAAGTAGETSMNGSYAERNRRMA 821
Query: 794 QVVCSLKNQEECMACGS 810
++VCSL+N+E+CM CGS
Sbjct: 822 EMVCSLENKEDCMMCGS 838
>gi|50290817|ref|XP_447841.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527152|emb|CAG60790.1| unnamed protein product [Candida glabrata]
Length = 894
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/785 (63%), Positives = 622/785 (79%), Gaps = 16/785 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KR GRKEPV+FDKITAR+ +L YGL D V V Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRSGRKEPVKFDKITARISRLCYGLDP-RIDAVKVTQRIISGVYEGVTTVELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA RVA+SNLHK T FS+ + ++Y+Y N +GK A +++D+V
Sbjct: 60 AETCAYMTTIHPDYATLAARVAISNLHKQTTKQFSQVVSNLYHYINPATGKHAPMISDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+M N LD AI+YDRDF F+YFGFKTLERSYLL+++ V ERPQH++MRV++GIH
Sbjct: 120 YQIVMDNKDELDSAIVYDRDFQFNYFGFKTLERSYLLRINGEVAERPQHLIMRVALGIHG 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++AL+TY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 180 RDLEAALETYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIEGIYDTLKECAL 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIRA+GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 240 ISKTAGGIGLHIHNIRATGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALWVPDLFM+RV +G W+LF PS A GL+
Sbjct: 300 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWVPDLFMKRVEQNGNWTLFSPSSAPGLS 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EGR K I A+KLW+ IL +Q ETGTP+M++KD+CN KSNQ+NL
Sbjct: 360 DCYGKEFEELYERYEREGRGK-TIKAQKLWYSILEAQTETGTPFMIYKDACNEKSNQRNL 418
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+SSP+ETAVCNLASIALP ++ S D K +
Sbjct: 419 GVIKSSNLCCEIVEYSSPDETAVCNLASIALPAFIET--------------SEDGKTSTY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L ++ K+IT NLNK+ID N+YP+ + SN+RHRPI +G+QGLADTF+LL LPF+S
Sbjct: 465 NFQKLHDIAKVITRNLNKVIDRNYYPVPEAKNSNMRHRPIALGVQGLADTFMLLRLPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A +LN IFETIY+ +L+AS ELA KDGPY++Y GSP+SKG+ Q DMWN P WDW
Sbjct: 525 EGAAKLNIQIFETIYHASLEASCELAQKDGPYQSYQGSPISKGVFQFDMWNAKPFGMWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K+GVRNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 585 DALRKDILKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W +K II +NGS+ + IP+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 645 LRDLVDLGIWDEGMKQHIITQNGSIQNLPNIPQELKDLYKTVWEISQKTIINMAADRSVY 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLN+ ++ P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D SV
Sbjct: 705 IDQSHSLNLFLQAPTMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQSVAQQAA 764
Query: 781 ANRAD 785
N AD
Sbjct: 765 NNIAD 769
>gi|89890042|ref|ZP_01201553.1| ribonucleoside-diphosphate reductase large chain [Flavobacteria
bacterium BBFL7]
gi|89518315|gb|EAS20971.1| ribonucleoside-diphosphate reductase large chain [Flavobacteria
bacterium BBFL7]
Length = 828
Score = 1066 bits (2757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/774 (65%), Positives = 621/774 (80%), Gaps = 24/774 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDG KEPV FDKITAR++KL YGLS H DPV VA +V G+Y GVTT++LD LA
Sbjct: 1 MFVVKRDGHKEPVMFDKITARVRKLCYGLSN-HVDPVKVAMRVIDGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA LA R++VSNLHK TK +F++ + D+Y Y N R+ KKA +++D+V
Sbjct: 60 AETAATMTTAHPDYARLAARISVSNLHKNTKKTFTDVVTDLYEYVNPRTEKKAPMISDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I NA L+ AIIY+RDF +DYFGFKTLERSYLLK++ ++ ERPQHMLMRVSVGIH
Sbjct: 120 YQVIQDNADRLNSAIIYNRDFGYDYFGFKTLERSYLLKINGKIAERPQHMLMRVSVGIHM 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD D+A++TY LMS+ +FTHATPTLFNAGTP+PQ+SSCFLL M+DDSIEGIYDTLK+ A
Sbjct: 180 DDLDAAIETYELMSKKFFTHATPTLFNAGTPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA GSYI GTNG+SNGIVPML+V+NDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNIRARGSYIGGTNGTSNGIVPMLKVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FLDL+KN GKEE RARDLFYA+W+ DLFM+RV + W+L CP + L
Sbjct: 300 MEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWMSDLFMKRVEANDTWTLMCPHECPDLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ +G EFE LY++YE+EG+ + I AR+LW +IL SQIETGTPYML+KD+ N KSNQ+NL
Sbjct: 360 NVYGDEFEALYTKYEQEGKGRKTIQARELWDKILESQIETGTPYMLYKDAANNKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLASIALP ++++ F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFIKDGA--------------------F 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +VTK +T NLNK+ID N+YP+ R SN+RHRP+G+GIQGLAD FI+L LPF S
Sbjct: 460 DHKALYKVTKRVTRNLNKVIDRNYYPVIEARNSNMRHRPVGLGIQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD---R 597
EA++LN +IFET+Y+ A +AS E+A ++G Y T+ GSPMS+G Q +MWNI SD R
Sbjct: 520 DEAKKLNSEIFETLYFAACEASMEMAQEEGAYSTFEGSPMSQGEFQFNMWNINDSDLSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
W+WS LR + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIYTRR LSGEFIVVN
Sbjct: 580 WNWSDLRTKVMEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRTLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLLKDL +LGLW +LK I+ NGS+ I IPE++K +YKTVWE+K K ++DM+ R
Sbjct: 640 KHLLKDLVDLGLWDDSLKNAIMRNNGSIQAIEGIPEDIKELYKTVWELKMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
G +IDQSQSLN+ ME KLTS+HFYAW G+KTGMYYLRT+AA DAIKFTV
Sbjct: 700 GYFIDQSQSLNLFMENVTTSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTV 753
>gi|195146786|ref|XP_002014365.1| GL19156 [Drosophila persimilis]
gi|194106318|gb|EDW28361.1| GL19156 [Drosophila persimilis]
Length = 821
Score = 1066 bits (2757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/829 (59%), Positives = 639/829 (77%), Gaps = 38/829 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
++V+KRDGR+E V FDKIT+R++KL Y L+ + DPV + +V G+Y GVTT +LD LA
Sbjct: 12 LFVVKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVSITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE +A +T NH DYA+LA R+AVSNLHK TK FS+ +D++ N+ + + +V++
Sbjct: 72 AEISAGLTCNHADYAILAARIAVSNLHKETKKVFSDVFEDLFKNINRETNTASPMVSEFH 131
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+ NA L+ AIIYDRDF ++YFGFKTLERSYLLK++ ++ ERPQHMLMRV++GIH
Sbjct: 132 YNIVKNNADRLNSAIIYDRDFGYNYFGFKTLERSYLLKINGKIAERPQHMLMRVALGIHG 191
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD D+A++TY+L+S+ +FTHA+PTLF A T +PQLSSCFLL M DSIEGI+ ++++CA+
Sbjct: 192 DDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMNSDSIEGIFKSVEQCAL 251
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA G+ I GTNG+SNG+VPML+VFN+ ARYVDQGGGKR GAFAIY
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+D+FEFLDL++N GKEE RARDLFYALW+PDLFM+RV + WSL CP GL
Sbjct: 312 LEPWHSDVFEFLDLKRNTGKEENRARDLFYALWIPDLFMKRVEANESWSLMCPHKCPGLQ 371
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG +FE LY +YE+EGRA + A+ LWF I+ SQ+ETG PYMLFKDSCNRKSNQQN+
Sbjct: 372 DVWGEKFEELYVKYEQEGRANRTVEAQALWFAIIESQVETGNPYMLFKDSCNRKSNQQNV 431
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+S+P+E AVCNLASIAL +V + + +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEVAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTK + +NLNKIID+N+YP+ ++SNLRHRPIGIG+QGLAD IL+ P+ES
Sbjct: 473 DFKKLKEVTKTVAKNLNKIIDINYYPLPEAKKSNLRHRPIGIGVQGLADALILMRFPYES 532
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA LN+ IFETIY+ AL+AS ELA + G YETY GSP+SKGILQ DMW+ TP++ WDW
Sbjct: 533 EEAGLLNQQIFETIYFGALEASCELAEEFGVYETYEGSPVSKGILQYDMWDKTPTNLWDW 592
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL+E I K+G+RNSLLVAPMPTAST+QI+GNNE FEPYT+NIYTRRVLSGEF VVN HL
Sbjct: 593 QSLKEDIKKHGIRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLTEL LW +K KII GS+ I IP++++ +YKTVWEI K+ + MAADRG +
Sbjct: 653 LRDLTELDLWDDEMKNKIISSRGSIQDIETIPQKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD-------- 772
IDQSQS N+H+ +P++GKLTS+HF++W G+KTGMYYLRT+ AA+AI+FTVD
Sbjct: 713 IDQSQSFNVHVAEPNYGKLTSIHFFSWKAGLKTGMYYLRTKPAANAIQFTVDKKQAASAL 772
Query: 773 --------TSVLNNEKANRA---DNDVEANLAQVVCSLKNQEECMACGS 810
S L +E N + ++D E ++A++VCSL+N++ C++CGS
Sbjct: 773 NDLNGSFNKSTLLDESTNNSHHIESDRERHMAEMVCSLENKDACLSCGS 821
>gi|389739083|gb|EIM80277.1| hypothetical protein STEHIDRAFT_105343 [Stereum hirsutum FP-91666
SS1]
Length = 917
Score = 1066 bits (2756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/779 (62%), Positives = 623/779 (79%), Gaps = 20/779 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV KR RKE ++ DK+TAR+KKLSYGL H D V QKV GVY G+TT++LD LAA
Sbjct: 15 YVFKRGKRKESIQADKLTARVKKLSYGLDDMHLDANEVTQKVIQGVYPGITTSELDNLAA 74
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA +T HPDYA+LA R+AVSNLHK TK SFS+TI D+Y+Y N ++G+ A +++D+ Y
Sbjct: 75 ETAAYLTTKHPDYAILAARIAVSNLHKTTKESFSQTISDLYHYVNPKTGRAAGMISDETY 134
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
+ + ++A LD AI++ RDF++++FG+KTLERSYLLK++ R ERPQH+LMRV+ GIH +
Sbjct: 135 KFVNEHAERLDSAIVWSRDFEYNFFGYKTLERSYLLKINGRTAERPQHLLMRVACGIHPN 194
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D D AL++Y LMSQ +FTH +PTLFNAGTP PQL+SCFL+CMKDDSIEGIYDTLK CA+I
Sbjct: 195 DIDRALESYTLMSQRYFTHGSPTLFNAGTPNPQLASCFLVCMKDDSIEGIYDTLKSCAMI 254
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKSAGGIGL+IHNIRA+GSYI GTNG SNGIVPML+ F+ TARYVDQGG KR GAFAIYL
Sbjct: 255 SKSAGGIGLNIHNIRATGSYIAGTNGYSNGIVPMLRAFDATARYVDQGGNKRPGAFAIYL 314
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+FEFLDLRKN GKEE RARDLFYALW+PDLFM+R+ ++G WSLF P +A GL +
Sbjct: 315 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRIGENGNWSLFSPDEAPGLHE 374
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
+G EFE LY +YE EG+A I A+KLW+ I+++QIETG P+M +KD+ NRK+NQ+NLG
Sbjct: 375 VYGDEFEALYEKYEREGKAMKTIPAQKLWYAIMDAQIETGGPFMCYKDAANRKTNQKNLG 434
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
IKSSNLCTEI+E+S+P+ETAVCNLAS+ALP ++ +N +++
Sbjct: 435 VIKSSNLCTEIMEYSAPDETAVCNLASLALPSFI--------------------ENGVYN 474
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L +VTK++T NLN++ID+N YPI R SN+RHRPIG+G+QGLAD F++L +PF+S
Sbjct: 475 FQKLHDVTKVVTYNLNRVIDLNFYPIPEARNSNMRHRPIGLGVQGLADAFMILRMPFDSD 534
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA++LN IFETIY+ A++AS ++A +G Y +Y GSP SKG LQ D+W + PS+ WDW+
Sbjct: 535 EARKLNLQIFETIYHAAVEASCDIAKVEGAYASYEGSPASKGELQFDLWGVKPSELWDWA 594
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
L+ ++++G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL+GEF VV LL
Sbjct: 595 ELKAKVAQHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 654
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
++L L LW +K +II NGSV I EIP+++KAIYKTVWEI QK ++D+AADRG +I
Sbjct: 655 RELIRLDLWDDNMKNRIIAHNGSVQYIPEIPDDVKAIYKTVWEISQKKVLDLAADRGAFI 714
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
QSQSLNIH++ P G+LTS+HFY W +G+KTGMYYLRT+ A+ AI+FT+D +++ K
Sbjct: 715 CQSQSLNIHLQAPTVGQLTSMHFYGWKRGLKTGMYYLRTKPASQAIQFTLDHNLVKETK 773
>gi|405962741|gb|EKC28390.1| Ribonucleoside-diphosphate reductase large subunit [Crassostrea
gigas]
Length = 790
Score = 1066 bits (2756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/808 (62%), Positives = 634/808 (78%), Gaps = 33/808 (4%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DGR+E V FDKIT+R+ KL YGL + DP + KV G+Y GVTT +LD LAAETAA
Sbjct: 12 DGRQEKVMFDKITSRISKLCYGLHADFVDPAAITLKVINGLYPGVTTVELDNLAAETAAT 71
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
MT HPDYA+LA R+AVSNLHK TK FS+ + D+Y + N ++ K + +++ +++ IIMK
Sbjct: 72 MTTKHPDYAILAARIAVSNLHKETKKVFSDVMDDLYKWINPKTNKHSPMISPEIHSIIMK 131
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSA 186
NA L+ AII+DRDF++ YFGFKTLERSYLL+++ +V ERPQHMLMRV+VGIH +D D A
Sbjct: 132 NADRLNSAIIFDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHHNDIDGA 191
Query: 187 LKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAG 246
++TY+L+S+ WFTHA+PTLFNAGT +PQLSS IEGIYDTLK+CA+ISKSAG
Sbjct: 192 IETYNLLSEKWFTHASPTLFNAGTNRPQLSS----------IEGIYDTLKQCALISKSAG 241
Query: 247 GIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHA 306
GIGL++H IR++GSYI GTNG+SNG++PML+V+N+TARYVDQGG KR GAFAIYLEPWHA
Sbjct: 242 GIGLNVHCIRSTGSYIAGTNGTSNGLLPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHA 301
Query: 307 DIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIE 366
D+F FLD +KN GKEE RARDLFYA+W+PDLFM+RV + +W+L P + GL D WG E
Sbjct: 302 DVFMFLDCKKNTGKEEQRARDLFYAMWIPDLFMKRVEKNEEWTLMDPHECPGLHDCWGEE 361
Query: 367 FEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSS 426
FE LY +YE+EG+ + I A++LW+ I+ +Q ETGTPYML+KD CNRKSNQQNLGTIK S
Sbjct: 362 FETLYQKYEQEGKGRKTIKAQQLWYAIIEAQTETGTPYMLYKDHCNRKSNQQNLGTIKCS 421
Query: 427 NLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLA 486
NLCTEIVE+SSP+E AVCNLASIAL YV+ ++ +DFE+L
Sbjct: 422 NLCTEIVEYSSPDEVAVCNLASIALNMYVK-------------------PDKTYDFEKLK 462
Query: 487 EVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQL 546
VTK+I NLNKIID+N+YP+ RSN+RHRPIGIG+QGLAD FIL+ PFES EAQ L
Sbjct: 463 SVTKVIVRNLNKIIDINYYPVPEAERSNMRHRPIGIGVQGLADAFILMRYPFESEEAQLL 522
Query: 547 NKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREM 606
NK IFETIYY AL+AS ELA +DGPYETY G P+SKGILQ DMWN+TP+D DW+SLR
Sbjct: 523 NKQIFETIYYAALEASCELAERDGPYETYQGCPVSKGILQHDMWNVTPTDLHDWNSLRAK 582
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTE 666
I K+G+RNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF VVN+HL+KD+TE
Sbjct: 583 IKKHGIRNSLLLAPMPTASTAQILGNNESIEAYTSNIYSRRVLSGEFQVVNQHLMKDMTE 642
Query: 667 LGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQS 726
GLW +K KII GS+ I +IP+E++ +YKTVWEI QKT++ MAADRG +IDQSQS
Sbjct: 643 RGLWDDDMKNKIIAYGGSIQNIEKIPKEIRDLYKTVWEISQKTVLKMAADRGAFIDQSQS 702
Query: 727 LNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA-NRAD 785
LNIH+ +P++GKLTS+HFYAW G+KTGMYYLRT+ AA AIKFTVD + L + A+
Sbjct: 703 LNIHIAEPNYGKLTSMHFYAWKLGLKTGMYYLRTKPAASAIKFTVDKTKLTQPSGKSAAE 762
Query: 786 NDVE---ANLAQVVCSLKNQEECMACGS 810
++E N+A +VCSL+N+E+CM CGS
Sbjct: 763 QEMEETTQNMAAMVCSLQNKEDCMMCGS 790
>gi|406025256|ref|YP_006705557.1| ribonucleoside-diphosphate reductase large subunit [Cardinium
endosymbiont cEper1 of Encarsia pergandiella]
gi|404432855|emb|CCM10137.1| Ribonucleoside-diphosphate reductase large subunit [Cardinium
endosymbiont cEper1 of Encarsia pergandiella]
Length = 778
Score = 1066 bits (2756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/772 (63%), Positives = 623/772 (80%), Gaps = 20/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+KRDGR E ++FDKIT R++KL YGL++++ D + + +K+ G++ V T+ +D LA
Sbjct: 1 MLVVKRDGRLESIKFDKITLRIEKLCYGLNRDYIDIIAIVKKIIEGIHDRVATSAIDSLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET AAM V HPDY +LA R+A+SNLHK T SFS TIK +Y Y N +G ASL+ +
Sbjct: 61 AETVAAMAVYHPDYTILAARIAISNLHKATSKSFSSTIKRLYTYVNPATGTNASLIDKAI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+ ++AA LD AI+++RDF +D+FGFKTLERSYLLK++ ++VERPQ+MLMRV++GIH
Sbjct: 121 YKIVSEHAATLDDAIVHERDFSYDFFGFKTLERSYLLKINGKIVERPQYMLMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ ++ L TY LMS+ WFTHATPTLFNAGTP+PQLSSCFLL ++DSIEGIY+TL +CA
Sbjct: 181 DNLNAVLDTYQLMSEKWFTHATPTLFNAGTPRPQLSSCFLLTTQNDSIEGIYNTLTQCAK 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+ AGGIGLSIHNIRA+GSYI GTNG SNGIVPML+ F+ TARYVDQGGG+RKG+F+IY
Sbjct: 241 ISQFAGGIGLSIHNIRATGSYIRGTNGMSNGIVPMLRNFDMTARYVDQGGGRRKGSFSIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FL+L+KN GKEE RARDLFY LW+PDLFMERV D WSLFCP++A GLA
Sbjct: 301 LEPWHADIFDFLELKKNHGKEERRARDLFYGLWIPDLFMERVEADEMWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G FE Y QYE+EGRA+ I A+ LWF IL +QIETGTPYML+KD+ N KSNQ+NL
Sbjct: 361 DCYGAAFEQKYKQYEKEGRARTSIKAQTLWFAILEAQIETGTPYMLYKDAANEKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+++P+E AVCNLASIALP +V + NR F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEIAVCNLASIALPMFVDD-------------------NRSF 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D +L EVT ++T+NLNK+ID N+YP+ R SNL+HRP+G+G+QGLAD F+ + L F+S
Sbjct: 462 DHTKLYEVTYLVTKNLNKVIDRNYYPLPEARYSNLKHRPMGLGVQGLADAFLKMRLVFDS 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD-RWD 599
PEA+ LN++IFETIY+ AL AS +LA K+G YE+Y GSPMS+GILQ DMW +TPS RW+
Sbjct: 522 PEARLLNQEIFETIYFAALTASKDLAQKEGVYESYPGSPMSEGILQFDMWGVTPSSGRWN 581
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W LR+ I+++G+RN+LLVAPMPTASTSQILGNNECFEPYT+NIYTRRVLSGEFIVVNK+
Sbjct: 582 WDHLRKEIAQHGIRNALLVAPMPTASTSQILGNNECFEPYTANIYTRRVLSGEFIVVNKY 641
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL DL +LGLW+ +K +I NGS+ +I+ IPE +K +Y+TVWEI QK+++DMAADR
Sbjct: 642 LLADLIQLGLWNEEVKEALIIGNGSIQQIACIPEYIKKMYRTVWEIPQKSIIDMAADRAP 701
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
YI QSQSLN++++ KLTS+HFYAW KG+KTGMYYLRT+AAADAIKFT+
Sbjct: 702 YICQSQSLNLYVKDATMAKLTSMHFYAWKKGLKTGMYYLRTKAAADAIKFTI 753
>gi|330805291|ref|XP_003290618.1| ribonucleotide reductase large subunit [Dictyostelium purpureum]
gi|325079257|gb|EGC32866.1| ribonucleotide reductase large subunit [Dictyostelium purpureum]
Length = 855
Score = 1066 bits (2756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/790 (62%), Positives = 631/790 (79%), Gaps = 16/790 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLK---KLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLD 57
MYVIKRDG+K+ V FDKIT+R++ ++ L++E DP VAQKV +GV+ GV TT+LD
Sbjct: 16 MYVIKRDGQKQNVTFDKITSRIRFLCEMEPRLNEEIVDPAEVAQKVISGVFPGVKTTELD 75
Query: 58 ELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVA 117
LAAETAA M+ HPDY +LA R++VSNLHK T S ET+K Y Y N ++ A LV+
Sbjct: 76 NLAAETAAYMSTRHPDYGVLAARISVSNLHKQTSTSLVETVKIQYEYINSKTNLPAPLVS 135
Query: 118 DDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
++Y+I+ ++A L+ AI Y RDFD+D+FGFKTLERSYL ++++ +VERPQHMLMRVS+G
Sbjct: 136 KELYDIVNEHAERLEKAIDYQRDFDYDFFGFKTLERSYLHRINNSIVERPQHMLMRVSIG 195
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
IH +D D+A+ TY +SQ FTHATPTLFNAGTP PQ+SSCFL+ MK+DSI+GIYDTLK+
Sbjct: 196 IHGNDIDNAILTYEKLSQKLFTHATPTLFNAGTPYPQMSSCFLVQMKEDSIDGIYDTLKQ 255
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIG++ H IRA+ SYI GTNG+SNG+VPML+VFNDTARYVDQGGGKRKGAF
Sbjct: 256 CALISKSAGGIGIACHKIRAAQSYIRGTNGTSNGLVPMLRVFNDTARYVDQGGGKRKGAF 315
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
A+YLEPWH+DIFEF++L+KN GKEE RARDLFYALWV DLFMERV +G WSLFCP++A
Sbjct: 316 AVYLEPWHSDIFEFIELKKNHGKEEMRARDLFYALWVSDLFMERVEQNGDWSLFCPNEAP 375
Query: 358 GLADSWGIEFEHLYSQYEE-EGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSN 416
L ++ E LY +YE G A+ VI A++LWF I+ SQ+ETGTP++L+KDSCN KSN
Sbjct: 376 RLDETHSEEHRELYLKYENTPGLARRVIKAQELWFAIMESQVETGTPFILYKDSCNSKSN 435
Query: 417 QQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSK 476
Q+NLGTI SSNLCTEI++++SP+E AVCNLASIALP+++R K GS + K
Sbjct: 436 QKNLGTISSSNLCTEIIQYTSPDEIAVCNLASIALPKFIRRKE-----------GSTNPK 484
Query: 477 NRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGL 536
+ FD ++L E+TKI+T+NLNKIID N+YP++ + SNLRHRPIGIGIQGLAD FI L +
Sbjct: 485 EKEFDHQKLYEITKIVTKNLNKIIDRNYYPVQEAKTSNLRHRPIGIGIQGLADVFIQLRM 544
Query: 537 PFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD 596
PF+ A +LN +I ETIY+ AL AS EL++ +GPYET+ GSP S+GILQ D WN+TP++
Sbjct: 545 PFDGTAAAKLNIEIAETIYFAALTASHELSLIEGPYETFKGSPASQGILQYDFWNVTPTN 604
Query: 597 RWDWSSLRE-MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
RW+W+ L++ +++K G+RNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +
Sbjct: 605 RWNWTDLKDKIVNKGGLRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFTI 664
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VNK LL+DL ELG+WS LK +I+ GS+ I IP++LK +YKTVWEI+Q+TL+DMAA
Sbjct: 665 VNKQLLEDLMELGIWSPELKNQIVLNRGSIQSIPSIPDDLKELYKTVWEIRQRTLIDMAA 724
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
DRG +IDQSQS N+ + +P KLTS+HFY+W KG+KTGMYYLRTR AADAI+FTVD +V
Sbjct: 725 DRGAFIDQSQSFNVFIAEPTFAKLTSMHFYSWKKGLKTGMYYLRTRPAADAIQFTVDPTV 784
Query: 776 LNNEKANRAD 785
K D
Sbjct: 785 QQTPKPVEKD 794
>gi|448513340|ref|XP_003866926.1| Rnr1 large subunit of ribonucleotide reductase [Candida
orthopsilosis Co 90-125]
gi|380351264|emb|CCG21488.1| Rnr1 large subunit of ribonucleotide reductase [Candida
orthopsilosis Co 90-125]
Length = 866
Score = 1065 bits (2754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/784 (62%), Positives = 634/784 (80%), Gaps = 16/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPVRFDKITAR+++L YGL H +PV + QKV AGVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRKEPVRFDKITARVQRLCYGLDSNHVEPVAITQKVIAGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T +S+ KD+Y Y N + A +++ +
Sbjct: 61 AETAATMTTIHPDYAVLAARIAVSNLHKQTIKLYSQVSKDLYEYINPETNLHAPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II +NA L+ AI+YDRDF+++YFGFKTLERSYLL+++ +V ERPQH++MRV++GIH
Sbjct: 121 YDIIQENADELNSAIVYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++TY+LMSQ +FTH +P LFNAGTP+PQ+SSCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 RDIPRVIETYNLMSQRYFTHGSPCLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIR++G+YI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIF+F+++RKN GKEE RARDLF ALW+PDLFM+RV +G+W+LF P++A GLA
Sbjct: 301 LEPWHSDIFDFIEIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGEWTLFSPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G EF LY +YE EGR + I A+KLW+ IL +Q ETGTP+ML+KD+CN KSNQ+NL
Sbjct: 361 DTYGDEFVELYEKYEREGRGRKTIKAQKLWYSILEAQTETGTPFMLYKDACNTKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+E AVCNLASIALP +V + D K+ +
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFVEQ----------------DGKHAWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L +VTK++T NLN++ID N+YP+ +SN+RHRPI +G+QGLAD F++L + F+S
Sbjct: 465 NFDKLHDVTKVVTRNLNRVIDRNYYPVPEAEKSNMRHRPIALGVQGLADAFMVLRIGFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ A++AS ELA ++GPYETY GSP S+G+LQ D+W+ P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASIELAQEEGPYETYQGSPASQGLLQYDLWDRKPTELWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +VN +L
Sbjct: 585 DELKKKLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL +LG+W+ A+K+ II NGS+ + IP+E+KA+YKTVWEI QK ++DMA+DR +
Sbjct: 645 LKDLVDLGIWNDAMKSSIISNNGSIQALPNIPDEIKALYKTVWEISQKHIIDMASDRAAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH++ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D ++ +
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKAIAESAG 764
Query: 781 ANRA 784
N A
Sbjct: 765 LNVA 768
>gi|443242948|ref|YP_007376173.1| ribonucleoside-diphosphate reductase [Nonlabens dokdonensis DSW-6]
gi|442800347|gb|AGC76152.1| ribonucleoside-diphosphate reductase [Nonlabens dokdonensis DSW-6]
Length = 868
Score = 1065 bits (2754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/810 (63%), Positives = 629/810 (77%), Gaps = 37/810 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDG KEPV FDKITAR++KL YGLS H DPV VA +V G+Y GVTT++LD LA
Sbjct: 1 MFVVKRDGHKEPVMFDKITARVRKLCYGLSN-HVDPVKVAMRVIDGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA LA R++VSNLHK TK +FS+ + D+Y Y N R+ KKA +++D+V
Sbjct: 60 AETAATMTTAHPDYARLAARISVSNLHKNTKKTFSDVVTDLYEYVNPRTSKKAPMISDEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I NA L+ AIIY+RDF +DYFGFKTLERSYLLK++ ++ ERPQHMLMRVSVGIH
Sbjct: 120 YKVIQDNADRLNSAIIYNRDFGYDYFGFKTLERSYLLKINGQIAERPQHMLMRVSVGIHI 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD D+A++TY LMS+ +FTHATPTLFNAGTP+PQ+SSCFLL M+DDSIEGIYDTLK+ A
Sbjct: 180 DDLDAAIETYELMSKKFFTHATPTLFNAGTPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA GSYI GTNG+SNGIVPML+V+NDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNIRARGSYIGGTNGTSNGIVPMLKVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FLDL+KN GKEE RARDLFYA+W+ DLFM+RV + W+L CP + L
Sbjct: 300 MEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWISDLFMKRVETNDTWTLMCPHECPDLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ G EFE LY++YE+EG+ + I AR+LW +IL SQIETGTPYML+KD+ N KSNQ+NL
Sbjct: 360 NVHGDEFEALYTKYEQEGKGRKTIPARELWDKILESQIETGTPYMLYKDAANNKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+++P+E AVCNLASIALP +V++ F
Sbjct: 420 GTIRSSNLCTEIIEYTAPDEVAVCNLASIALPMFVKDGA--------------------F 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +VTK +T NLNK+ID N+YP++ SN+RHRP+G+GIQGLAD FI+L LPF
Sbjct: 460 DHKALYKVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPVGLGIQGLADAFIMLRLPFTC 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
EA+QLN DIFET+Y+ A +AS E+A ++G Y T+ GSPMS+G Q +MWNI S R
Sbjct: 520 DEAKQLNSDIFETLYFAACEASMEMAQEEGAYSTFAGSPMSQGQFQYNMWNINDDQLSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
W+W+ LR + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIYTRR LSGEFIVVN
Sbjct: 580 WNWADLRTKVMEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRTLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLLKDL +LGLW +LK I+ NGS+ I IPE++K +YKTVWE+K K ++DM+ +R
Sbjct: 640 KHLLKDLVDLGLWDDSLKNAIMRNNGSIQAIEGIPEDIKELYKTVWELKMKDIIDMSRER 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFT------- 770
G +IDQSQSLN+ ME KLTS+HFYAW G+KTGMYYLRT+AA DAIKFT
Sbjct: 700 GYFIDQSQSLNLFMENVTTSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTVTKEKKA 759
Query: 771 ------VDTSVLNNEKANRADNDVEANLAQ 794
V T V+N +A N + A Q
Sbjct: 760 VPVATPVSTPVINTAAPAQAANTLRAQQVQ 789
>gi|383853838|ref|XP_003702429.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Megachile rotundata]
Length = 821
Score = 1065 bits (2754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/836 (61%), Positives = 638/836 (76%), Gaps = 47/836 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGRKE V FDKIT+R++KL Y L ++ DP + +V +G+Y GVTT +LD LA
Sbjct: 7 MFVVKRDGRKEDVHFDKITSRIQKLCYNLDMDYVDPSAITFRVISGLYSGVTTVELDNLA 66
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK TK SFSE I D+Y+ + K ++++
Sbjct: 67 AETAATMTTKHPDYAVLAARIAVSNLHKETKKSFSEVIHDLYHVQEQYLNKPRPVISEKY 126
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y II NA+ L+ AIIYDRDF ++YFGFKTLERSYLLK+ +VVERPQHMLMRV+V IH
Sbjct: 127 YNIIQNNASKLNSAIIYDRDFSYNYFGFKTLERSYLLKIHGKVVERPQHMLMRVAVAIHG 186
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + A++TY+ +S+ +FTHA+PTLF+A T Q+SSCFLL M +DSIEGIYDTLK+CA+
Sbjct: 187 EDIEKAIETYNFLSERYFTHASPTLFSACTVTQQMSSCFLLSMTEDSIEGIYDTLKRCAL 246
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA G+ I GT G SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 247 ISKSAGGIGLNVHCIRARGTPIAGTLGVSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 306
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDL+KN GKEE RAR+LFYALW+PDLFM+RV ++G W+L CP ++ GLA
Sbjct: 307 LEPWHADIFEFLDLKKNTGKEENRARELFYALWIPDLFMKRVLENGVWTLMCPHESPGLA 366
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE E R K I AR LW IL +Q+ETGTPYML+KD CNRKSNQQN+
Sbjct: 367 DVWGDEFETLYTRYENEKRFKRQIQARDLWTAILIAQVETGTPYMLYKDHCNRKSNQQNI 426
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTE+V++SS +E AVCNLASIA+ +V +S N+ F
Sbjct: 427 GTIKSSNLCTEVVQYSSADEVAVCNLASIAVNMFV------------------NSSNKTF 468
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +VTKI+T NL+K+IDVN+YPI ++SN RHRPIGIGIQGLAD F+L+ PFES
Sbjct: 469 DFQKLKKVTKIVTCNLDKVIDVNYYPIPEAKKSNFRHRPIGIGIQGLADAFLLMRYPFES 528
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ+LN IFET+YY AL+AS ELA + G YETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 529 EEAQKLNIQIFETLYYGALEASCELAEEKGTYETYEGSPVSKGILQYDMWNVTPTDLWDW 588
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+E I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 589 AALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 648
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLTE LW +K +II NGS+ I IP +LK +YKTVWEI QK ++ MAADRG +
Sbjct: 649 LRDLTERDLWDENMKNEIIANNGSIQDIERIPSDLKMLYKTVWEISQKVVLKMAADRGAF 708
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS------ 774
IDQSQSLN+HM +P KLTS+HFY W G+KTGMYYLRT+ AA+A++FTVD S
Sbjct: 709 IDQSQSLNVHMAKPTTEKLTSMHFYGWQMGLKTGMYYLRTKPAANALQFTVDKSKLRSAT 768
Query: 775 ------VLNNEKAN--------------RADNDVEANLAQVVCSLKNQEECMACGS 810
LN E N R+ D+EA LA CS +N + CMACGS
Sbjct: 769 STPANQSLNLESGNDEGYMNSSKKWLQDRSSEDIEAVLA---CSRENGDACMACGS 821
>gi|447146|prf||1913428A ribonucleotide reductase:SUBUNIT=large
Length = 811
Score = 1065 bits (2753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/831 (60%), Positives = 643/831 (77%), Gaps = 41/831 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGR+E V FDKITAR+ +L YGL +H DPV + QKV +GVY GVTT +LD LA
Sbjct: 1 MFVYKRDGRQEKVAFDKITARVSRLCYGLDSDHVDPVEITQKVISGVYPGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T+ FS ++ +++Y N ++ K A +++D +
Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKQTEKVFSTVVQQLHDYVNPKTDKPAPMISDKI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+MK+ LD AIIYDRDF +++FGFKTLERSYLL++D +V ERPQHM+MRV+VGIH
Sbjct: 121 YDIVMKHKDELDSAIIYDRDFTYNFFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A++TY+LMSQ +FTHA+PTLFNAGTP+PQLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 EDIEAAIETYNLMSQRYFTHASPTLFNAGTPRPQLSSCFLVTMKDDSIEGIYDTLKMCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AG + +IHNIRA+GSYI GTNG+SNGIVPM++V+N+TARYVDQGG KR GAFA Y
Sbjct: 241 ISKTAGVLVFNIHNIRATGSYIAGTNGTSNGIVPMIRVYNNTARYVDQGGNKRPGAFAAY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+ +FL+LRK G E+ RAR +FYALW+PDLFM+RV + +W+ FCP++A GLA
Sbjct: 301 LEPWHADVMDFLELRKTHGNEDFRARQMFYALWIPDLFMQRVERNEQWTFFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EF LY +YE+E R + + A+K+W+ IL SQ+ETG P+ML+KDSCNRKSNQ+N+
Sbjct: 361 DVWGDEFVALYEKYEKENRGRRSLPAQKVWYAILQSQVETGNPFMLYKDSCNRKSNQKNV 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEIVE+SSP+E AVCNLAS+ALP ++ +D K +
Sbjct: 421 GTIRSSNLCTEIVEYSSPDEVAVCNLASVALPTFI-----------------KDGK---Y 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L +V K++T NLNKIIDVN+YP+ RRSN+RHRP+G+G+QGLAD F L LPFES
Sbjct: 461 NFQKLHDVVKVVTRNLNKIIDVNYYPVPEARRSNMRHRPVGLGVQGLADAFFALRLPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A++LN IFETIY+ AL+AS E+A +G YE+Y GSP +GILQ DMWN+ P+D WDW
Sbjct: 521 AGAKKLNIQIFETIYHAALEASCEIAQVEGTYESYEGSPCIQGILQYDMWNVNPTDLWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ +E I+K+G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y RRVLSGEF +VN L
Sbjct: 581 AEFKEKIAKHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDL E LW+ +K K++ +GS+ I EIP++LK +YKTVWEI QKT++D AADRG +
Sbjct: 641 LKDLVERDLWNEDMKNKLVMLDGSIQAIPEIPQDLKDLYKTVWEISQKTVIDYAADRGPF 700
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL--NN 778
IDQSQSLNIH++ P +GK+TS+HFY W KG+KTGMYYLRT AA+ AIKFTVD L N
Sbjct: 701 IDQSQSLNIHLKDPSYGKITSMHFYGWKKGLKTGMYYLRTMAASAAIKFTVDPVALRARN 760
Query: 779 EKAN-----------RADNDVEANLAQV--------VCSLKNQEECMACGS 810
E++N +A+ E ++ CS+KN E C C +
Sbjct: 761 EESNEENKKPVIKNGKAEISAEPTKEEIDIYNEKVLACSIKNPEACEMCSA 811
>gi|401882642|gb|EJT46892.1| ribonucleoside-diphosphate reductase large chain [Trichosporon
asahii var. asahii CBS 2479]
gi|406700693|gb|EKD03858.1| ribonucleoside-diphosphate reductase large chain [Trichosporon
asahii var. asahii CBS 8904]
Length = 863
Score = 1064 bits (2751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/784 (61%), Positives = 613/784 (78%), Gaps = 18/784 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M++ KRDGRKEPV FDK+TAR+ KLSYGL +P ++ QKV G++ +TT +LD LA
Sbjct: 3 MWIYKRDGRKEPVAFDKVTARINKLSYGLDTNFVEPAIITQKVVQGIHPYITTVELDNLA 62
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAA++ HPD+A+LA R+A+SNLHK TK FS+ I+D+Y ++N ++GK A +V+++V
Sbjct: 63 AETAAALSPMHPDWAILAARIAISNLHKETKKQFSQVIEDLYQWHNPKTGKHAPMVSEEV 122
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+ KN LD AIIYDRDF ++YFGFKTLERSYLL++D ++ ERPQHMLMRVSVGIH
Sbjct: 123 YNIVSKNKEALDAAIIYDRDFAYNYFGFKTLERSYLLRIDGKIAERPQHMLMRVSVGIHG 182
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMS+ +FTHA+PTLFN+GTP Q+SSCFL+ MK+DSI+GIYDTLK CA
Sbjct: 183 DDIEKVIETYNLMSERYFTHASPTLFNSGTPHAQMSSCFLVAMKEDSIDGIYDTLKTCAQ 242
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIRA GSYI GTNG SNGIVPML+ ++ TARYVDQGG KR GAFAIY
Sbjct: 243 ISKTAGGIGLHIHNIRAKGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIY 302
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FLDLRKN GKEE RARDLFYALW+ DLFM+RV DG W+L CP++ GLA
Sbjct: 303 LEPWHADIFDFLDLRKNHGKEEVRARDLFYALWISDLFMKRVESDGDWTLMCPAECPGLA 362
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D EFE LY YE G+ + I A+KLWF IL +Q ETG P+ML+KD+ NRKSNQQ+L
Sbjct: 363 DVHSEEFEKLYESYERAGKGRKTIKAQKLWFAILEAQTETGGPFMLYKDAANRKSNQQHL 422
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+SSP+E AVCNLASIALP +V + + + +
Sbjct: 423 GTIKSSNLCTEIIEYSSPDEVAVCNLASIALPAFV------------------NFETKTY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L E+TK++T NL+++I N+YP+ R SN+RHRP+G+G+QGLADTF+ L +PF+S
Sbjct: 465 DFKKLHEITKVVTRNLDQVITRNYYPVPEARNSNMRHRPVGLGVQGLADTFMALRMPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+QLN IFETIY+ AL+AS E+A K G Y +Y GSPMS+G +Q D+W + P+D WDW
Sbjct: 525 REARQLNLQIFETIYHAALEASCEMAQKLGKYPSYEGSPMSQGKIQPDLWGVEPTDLWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ LR I+++GVRNSLLVAPMPTASTSQILG NECFEPYTS +Y+RRVLSG+F VV L
Sbjct: 585 TELRANIAQHGVRNSLLVAPMPTASTSQILGWNECFEPYTSMLYSRRVLSGDFAVVCPWL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL LG+W +K II GS+ I IP+++KAIYKTVWEI QK ++D+AADRG +
Sbjct: 645 LRDLINLGIWDEEMKNLIIASGGSIQHIPNIPDDIKAIYKTVWEISQKAVIDLAADRGAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ P +LTS+HFY W +G+KTG YYLRTR AA+AI+FT+D L K
Sbjct: 705 IDQSQSLNIHLANPSFSQLTSMHFYGWKRGLKTGAYYLRTRPAANAIQFTIDAKTLKQAK 764
Query: 781 ANRA 784
AN +
Sbjct: 765 ANES 768
>gi|91080433|ref|XP_968671.1| PREDICTED: similar to AGAP010198-PA [Tribolium castaneum]
gi|270005754|gb|EFA02202.1| hypothetical protein TcasGA2_TC007859 [Tribolium castaneum]
Length = 808
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/818 (60%), Positives = 632/818 (77%), Gaps = 27/818 (3%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV KRDGRKE V DKIT+R++KL YGL+ E DPV + KV +G+Y GVTT +LD LAA
Sbjct: 9 YVCKRDGRKEEVHIDKITSRIQKLCYGLNMEFVDPVSITLKVISGLYPGVTTVELDTLAA 68
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA MT NHPDYA+LA R+AVSNLHK TK FS+ I D++ + ++G+K +++D+ +
Sbjct: 69 ETAAMMTTNHPDYAILAARIAVSNLHKETKKQFSDVIDDLHKAVSSKTGRKTQMISDEHH 128
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
I+MKNA L+ IIYDRDF ++YFGFKTLERSYLLK++ ++VERPQHMLMRV+VGIH
Sbjct: 129 AIVMKNADRLNSCIIYDRDFSYNYFGFKTLERSYLLKINGKIVERPQHMLMRVAVGIHGS 188
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D DSA++TY+ MS+ +FTHA+PTLF+A TP+PQLSSCFL+ + +D++EGI L +CA+I
Sbjct: 189 DIDSAIETYNYMSEKYFTHASPTLFSAATPKPQLSSCFLVTLPEDNLEGISRCLTQCAMI 248
Query: 242 SKSAGGIGLSIHNIRASGSY----IHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
SK+AGG+G+SIHN+RA G+ + GT S+GIVP+L+VFN++ARYVDQGG KR GA
Sbjct: 249 SKTAGGLGVSIHNLRAKGTTFRTTLAGTPKVSDGIVPVLRVFNNSARYVDQGGNKRPGAC 308
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
AIYLEPWHADI +FL+L+KN GKE+ RARDLF+ALW PDLFM RV++D KWSL CP +
Sbjct: 309 AIYLEPWHADILDFLNLKKNTGKEQLRARDLFFALWTPDLFMRRVKNDEKWSLMCPHQSP 368
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
GLAD WG EFE LY +YE +GR + AR +W I SQ+ETGTPYML+KD+CNRKSNQ
Sbjct: 369 GLADCWGEEFEKLYEKYETDGRYVRQLPARDVWRAICVSQVETGTPYMLYKDACNRKSNQ 428
Query: 418 QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKN 477
QNLGTI+SSNLCTEIVEF+SP+E AVCNLASIA+ +V+ +
Sbjct: 429 QNLGTIRSSNLCTEIVEFTSPDEIAVCNLASIAVNMFVK------------------ADR 470
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
+DF +L E+TK++ +NLNK+ID+N+YP+ R+SNLRHRP+GIG+QGLAD FILL +P
Sbjct: 471 SGYDFNKLKEITKVVAKNLNKVIDLNYYPLPEARKSNLRHRPVGIGVQGLADAFILLRMP 530
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR 597
F+SPEA+ LN+ IFET+YY AL+AS ELA K GPYETY GSP+S+G+LQ DMW +TP++
Sbjct: 531 FDSPEAKALNRQIFETLYYGALEASCELAEKYGPYETYEGSPVSQGVLQYDMWGVTPTNL 590
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDWS L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY RRVLSGEF VVN
Sbjct: 591 WDWSDLKKKIAKYGVRNSLLLAPMPTASTAQILGNNESTEPYTSNIYVRRVLSGEFQVVN 650
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
+HLLKDLTE GLW +K +II GS+ I IP++LK +YKTVWEI QK ++DMAADR
Sbjct: 651 QHLLKDLTERGLWDDTMKNQIIANYGSIQNIPGIPDDLKQLYKTVWEISQKVIIDMAADR 710
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQS+NIH+ P++G ++S+HFY W KG+KTGMYYLRT+ AA+ I+FTVD S L
Sbjct: 711 GAFIDQSQSMNIHIAAPNYGVMSSMHFYGWDKGLKTGMYYLRTKPAANPIQFTVDKSKLI 770
Query: 778 NEKANRADNDVEANL-----AQVVCSLKNQEECMACGS 810
+ + E A +VCSL+N E C C +
Sbjct: 771 TKTSTGVGKVQETKTTPEEEAALVCSLRNPEACEMCSA 808
>gi|281204858|gb|EFA79053.1| ribonucleotide reductase large subunit [Polysphondylium pallidum
PN500]
Length = 868
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/798 (64%), Positives = 630/798 (78%), Gaps = 18/798 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKL---SYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLD 57
MYVIKRDG K V++DKIT RL+ L L+ E DP V QKV +GV+ GV TT+LD
Sbjct: 21 MYVIKRDGTKASVQYDKITQRLQSLCDLEPKLNGEVIDPSEVTQKVASGVFPGVKTTELD 80
Query: 58 ELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVA 117
LAAETAA M+ HPDY +LA R++VSNLHK T +SF ET++ +++ N ++G+ A LV+
Sbjct: 81 NLAAETAAYMSTKHPDYGVLAARISVSNLHKQTSSSFLETVEKQHSFTNPKTGQPAPLVS 140
Query: 118 DDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
D++Y ++ + L+ AI Y RDF++D+FGFKTLERSYL +++ ++ERPQ MLMRVS+G
Sbjct: 141 DELYNLVKIHHKRLEEAIDYRRDFEYDFFGFKTLERSYLHRINDIIIERPQQMLMRVSIG 200
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
IH DD DSA++TY+L+SQ FTHATPTLFN+GTP PQ+SSCFL+ MK+DSI+GIYDTLK+
Sbjct: 201 IHGDDIDSAIETYNLLSQRLFTHATPTLFNSGTPSPQMSSCFLVQMKEDSIDGIYDTLKQ 260
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIG+++H IRA+ SYI GTNG+SNG+VPML+VFNDTARYVDQGGGKRKGAF
Sbjct: 261 CALISKSAGGIGIAVHKIRAARSYIRGTNGTSNGLVPMLRVFNDTARYVDQGGGKRKGAF 320
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
A+YLEPWHADI EFLDLRKN GKEE RARDLFYALWV DLFMERV +D W+LFCP++A
Sbjct: 321 AVYLEPWHADIVEFLDLRKNHGKEEMRARDLFYALWVSDLFMERVENDDVWNLFCPNEAP 380
Query: 358 GLADSWGIEFEHLYSQYEE-EGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSN 416
GLAD WG EF LY +YE G ++ I A+ LWF I+ SQIETGTPY L+KD+CN KSN
Sbjct: 381 GLADCWGDEFRALYEKYENTPGLSRRTIKAQDLWFTIIESQIETGTPYFLYKDACNSKSN 440
Query: 417 QQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSK 476
QQNLGTI+ SNLCTEI++++S +E AVCNLASIALP+YVRE ++++
Sbjct: 441 QQNLGTIQCSNLCTEIIQYTSADEVAVCNLASIALPKYVRE--------------NKETG 486
Query: 477 NRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGL 536
FD + L EVTK IT NLNKIID N+YP+ R SN RHRPIGIGIQGLAD FI L L
Sbjct: 487 KPEFDHQYLFEVTKTITRNLNKIIDRNYYPVLEARNSNFRHRPIGIGIQGLADVFIRLRL 546
Query: 537 PFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD 596
PFES A LNK+I ETIY+ AL ASAELA +DGPYE++ GSP SKG LQ D WN+TPS
Sbjct: 547 PFESNGAAILNKEIAETIYFAALTASAELAERDGPYESFKGSPASKGTLQQDFWNVTPSP 606
Query: 597 RWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVV 656
RWDW+SL++ I G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVL+GEF VV
Sbjct: 607 RWDWTSLKQKIISTGLRNSLLIAPMPTASTSQILGNNEAFEPYTSNIYSRRVLAGEFTVV 666
Query: 657 NKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAAD 716
NK LL+DL +L LW+ +K +II GS+ I +IP++LK +YKTVWEI+Q+TL+DMAAD
Sbjct: 667 NKQLLQDLMDLDLWTPEMKNQIIAHRGSIQNIEDIPDDLKELYKTVWEIRQRTLIDMAAD 726
Query: 717 RGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
RG +IDQSQS N+ + +P KLTS+HFYAW KG+KTGMYYLRTRAAADAI+FTVD ++L
Sbjct: 727 RGAFIDQSQSFNVFIAEPTFQKLTSMHFYAWKKGLKTGMYYLRTRAAADAIQFTVDQTML 786
Query: 777 NNEKANRADNDVEANLAQ 794
N++ A+ A+ AQ
Sbjct: 787 ANKEQKDANATATADGAQ 804
>gi|350414638|ref|XP_003490375.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Bombus impatiens]
Length = 805
Score = 1063 bits (2748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/817 (62%), Positives = 629/817 (76%), Gaps = 25/817 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKE V FDKIT+R++KL Y L ++ DP + +V +G+Y GVTT +LD LA
Sbjct: 7 MYVIKRDGRKEDVHFDKITSRIQKLCYNLDMDYVDPSAITFRVISGLYSGVTTVELDNLA 66
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+A+SNLHK TK SFSE I ++YN + + ++++
Sbjct: 67 AETAATMTTKHPDYAILAARIAISNLHKETKKSFSEVIHNLYNVKEHYTNEVRPVISEKY 126
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y II NA L+ AIIYDRDF ++YFGFKTLERSYLLK+ +VVERPQHMLMRV+V IH
Sbjct: 127 YNIIQNNANKLNSAIIYDRDFSYNYFGFKTLERSYLLKIQGKVVERPQHMLMRVAVAIHG 186
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D A++TY+ +S+ +FTHA+P+LF A T Q Q+SSCFLL M DDSI+GIYDTLK+CA+
Sbjct: 187 EDIDKAIETYNFLSERYFTHASPSLFFACTRQQQMSSCFLLTMSDDSIDGIYDTLKRCAL 246
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA G+ I GT G SNG++PML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 247 ISKSAGGIGLNVHCIRARGTPIAGTLGVSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 306
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDL+KN GKEE RAR+LFYALW+PDLFM+RV D+G WSL CP ++ GL
Sbjct: 307 LEPWHADIFEFLDLKKNIGKEENRARELFYALWIPDLFMKRVFDNGVWSLMCPHESPGLP 366
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE E R K I AR LW IL SQ+ETGTPYML+KD CNRKSN QNL
Sbjct: 367 DVWGDEFEALYTRYENEKRYKRQIQARDLWTAILVSQVETGTPYMLYKDHCNRKSNHQNL 426
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIV++SSP+E AVCNLASIA+ +V +S N+ F
Sbjct: 427 GTIKSSNLCTEIVQYSSPDEIAVCNLASIAVNMFV------------------NSSNQTF 468
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L +VTKI+T NL+KIIDVN+YP+ + SN +HRPIGIGIQGLAD F+L+ PFES
Sbjct: 469 DFEKLRKVTKIVTCNLDKIIDVNYYPVHEAKTSNFKHRPIGIGIQGLADAFLLMRYPFES 528
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ+LN IFET+YY AL+AS ELA + G YETY GSP+SKGILQ DMWN+TP++ W+W
Sbjct: 529 EEAQKLNIQIFETLYYGALEASCELAAEKGTYETYEGSPVSKGILQYDMWNVTPTNLWNW 588
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+E I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY RRVLSGEF VVN HL
Sbjct: 589 TILKEKIAKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYARRVLSGEFQVVNPHL 648
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLTE LW +K +II NGSV I IP +LK +YKTVWEI QK ++ MAADRG +
Sbjct: 649 LRDLTERDLWDEDMKNEIIANNGSVQNIERIPNDLKMLYKTVWEIPQKVILKMAADRGAF 708
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL---- 776
IDQSQS+N+HM +P KLTS+HFY W G+KTGMYYLRT+ A +A++FTVD S L
Sbjct: 709 IDQSQSMNVHMAKPTTEKLTSMHFYGWKMGLKTGMYYLRTKPAVNALQFTVDKSKLRNTV 768
Query: 777 ---NNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
+N+ N ++ E + CS +N + CMACGS
Sbjct: 769 STTSNQSVNSESSNDEKLIEVFACSRENGDACMACGS 805
>gi|118346189|ref|XP_976850.1| Ribonucleotide reductase, barrel domain containing protein
[Tetrahymena thermophila]
gi|89288340|gb|EAR86328.1| Ribonucleotide reductase, barrel domain containing protein
[Tetrahymena thermophila SB210]
Length = 2928
Score = 1062 bits (2747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/776 (61%), Positives = 616/776 (79%), Gaps = 21/776 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
++I R K + +I RL+ L++ L + + L+ QKV G+Y G+ TT+LDELAA
Sbjct: 2087 HIINRKNEKMNLDLIRIKERLEALTFNLDRNFVNMDLIIQKVVNGMYDGIHTTELDELAA 2146
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA MT+ HP Y+L A R+AVSNLHK T +SF ETI +YNY +K SG++A L+A DVY
Sbjct: 2147 ETAAYMTIIHPHYSLFAARIAVSNLHKETSSSFFETISALYNYVDK-SGRQAGLIAKDVY 2205
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
EI+ +NA ++ I YDRD+ +D+FGFKTLERSYLLK+ ++ ERPQHMLMRVS+GIHK
Sbjct: 2206 EIVKENAEAIEKVINYDRDYTYDFFGFKTLERSYLLKIHGKIAERPQHMLMRVSIGIHKR 2265
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D +SA +TY+LMS+ WFTHATPTLFN+GTP+PQ+SSCFLL MK DSIEGIYDTLK+ A+I
Sbjct: 2266 DLESAFRTYNLMSEKWFTHATPTLFNSGTPKPQMSSCFLLQMKGDSIEGIYDTLKQSALI 2325
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKSAGGIG+S+HNIRA SYI GTNG SNG+VPML+VFNDTARYVDQGGGKRKG+FAIYL
Sbjct: 2326 SKSAGGIGISVHNIRARDSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAIYL 2385
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWH+DIFEFL L+KN GKEE RARDLFYALW+PDLFM+RV DG W+L CP++ GL D
Sbjct: 2386 EPWHSDIFEFLQLKKNHGKEEQRARDLFYALWIPDLFMKRVISDGTWTLMCPNECPGLPD 2445
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EFE LY++YE EG+ + I+AR+LW +I++SQIETGTPYML+KD+CNRKSNQQNLG
Sbjct: 2446 VWGDEFEALYTKYENEGKGRKTINARELWQDIVDSQIETGTPYMLYKDACNRKSNQQNLG 2505
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+E++SP+E AVCNLASI+L ++V+E G +D
Sbjct: 2506 TIKSSNLCTEIIEYTSPDEVAVCNLASISLVKFVKENGE-------------------YD 2546
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
+++L E++K++T NLNK+ID N+YP+ + SN+RHRPIGIG+QGLAD FI + + FES
Sbjct: 2547 YQKLYEISKVVTFNLNKVIDENYYPVIEAKNSNMRHRPIGIGVQGLADAFIKMRISFESD 2606
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD-RWDW 600
EAQ +N+ IFETIY+ A +AS E+A+K+GPYET+ GSP SKG LQ D+WN P +DW
Sbjct: 2607 EAQIVNEKIFETIYFGACEASMEIAIKEGPYETFKGSPASKGQLQFDLWNYKPHLCGYDW 2666
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I ++G+RNSLL++PMPTASTSQILGN E FEPYTSN+YTRRVL+GEF+ +N HL
Sbjct: 2667 DGLKQKIVEHGMRNSLLISPMPTASTSQILGNCESFEPYTSNLYTRRVLAGEFVCINPHL 2726
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
++DL E LW+ ++K +++ NGSVS++ +IP+++K +YKTVWE+ QK ++++A R +
Sbjct: 2727 VQDLIERNLWNPSIKNQLLAFNGSVSQVPDIPDDIKQLYKTVWEVSQKAIINLAVGRSPF 2786
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
IDQSQSLNIH+ P + K+TS+HFYAW KG+KTGMYYLR+R AAD IKFT+D L
Sbjct: 2787 IDQSQSLNIHISDPSYSKITSMHFYAWEKGLKTGMYYLRSRPAADPIKFTLDVESL 2842
>gi|194388656|dbj|BAG60296.1| unnamed protein product [Homo sapiens]
Length = 762
Score = 1062 bits (2747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/777 (64%), Positives = 622/777 (80%), Gaps = 20/777 (2%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSF 94
DP + KV G+Y GVTT +LD LAAETAA +T HPDYA+LA R+AVSNLHK TK F
Sbjct: 5 DPAQITMKVIQGLYSGVTTVELDTLAAETAATLTTKHPDYAILAARIAVSNLHKETKKVF 64
Query: 95 SETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERS 154
S+ ++D+YNY N +GK + +VA +I++ N L+ AIIYDRDF ++YFGFKTLERS
Sbjct: 65 SDVMEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERS 124
Query: 155 YLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQ 214
YLLK++ +V ERPQHMLMRVSVGIHK+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQ
Sbjct: 125 YLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQ 184
Query: 215 LSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVP 274
LSSCFLL MKDDSIEGIYDTLK+CA+ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VP
Sbjct: 185 LSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVP 244
Query: 275 MLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWV 334
ML+V+N+TARYVDQGG KR GAFAIYLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+
Sbjct: 245 MLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWI 304
Query: 335 PDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEIL 394
PDLFM+RV + WSL CP++ GL + WG EFE LY+ YE++GR + V+ A++LW+ I+
Sbjct: 305 PDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAII 364
Query: 395 NSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRY 454
SQ ETGTPYML+KDSCNRKSNQQNLGTIK SNLCTEIVE++S +E AVCNLAS+AL Y
Sbjct: 365 ESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMY 424
Query: 455 VREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSN 514
V + +DF++LAEVTK++ NLNKIID+N+YP+ SN
Sbjct: 425 V-------------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSN 465
Query: 515 LRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYET 574
RHRPIGIG+QGLAD FIL+ PFES EAQ LNK IFETIYY AL+AS +LA + GPYET
Sbjct: 466 KRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYET 525
Query: 575 YFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNE 634
Y GSP+SKGILQ DMWN+TP+D WDW L+E I+K G+RNSLL+APMPTAST+QILGNNE
Sbjct: 526 YEGSPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNE 585
Query: 635 CFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEE 694
EPYTSNIYTRRVLSGEF +VN HLLKDLTE GLW +K +II NGS+ I EIP++
Sbjct: 586 SIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDD 645
Query: 695 LKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTG 754
LK +YKTVWEI QKT++ MAA+RG +IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTG
Sbjct: 646 LKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTG 705
Query: 755 MYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
MYYLRTR AA+ I+FT++ L +++ + + + N A +VCSL+N++EC+ CGS
Sbjct: 706 MYYLRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 762
>gi|422294256|gb|EKU21556.1| ribonucleoside-diphosphate reductase subunit M1 [Nannochloropsis
gaditana CCMP526]
Length = 974
Score = 1062 bits (2746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/784 (62%), Positives = 617/784 (78%), Gaps = 11/784 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGR+EPV FDKIT RL+ L GL+ ++ DP VAQKV G+Y GV+T +LD LA
Sbjct: 130 MHVVKRDGRREPVAFDKITKRLRSLCKGLNTDYVDPGRVAQKVVQGMYNGVSTAELDNLA 189
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA + ++HPDYA LA RV+VSNLHK T SFS+T++ +Y++ + +G A ++++V
Sbjct: 190 AETAAYLNIDHPDYARLAARVSVSNLHKETNPSFSQTMRQLYDHVDPATGHAAGFISEEV 249
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++ + LD A+ ++RD+ FDYFGFKT+ER+YLLK+ +VVERPQ+ML+RV++GIH
Sbjct: 250 MALVAAHGPTLDAAVRHERDYFFDYFGFKTMERAYLLKIGRKVVERPQYMLLRVALGIHG 309
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +AL+TY LMS WF HA+PTLF+AGT PQ+SSCFLL M+ DSI GIYDTLK+CA+
Sbjct: 310 EDLPAALETYELMSNKWFIHASPTLFHAGTRFPQMSSCFLLAMQADSIVGIYDTLKQCAV 369
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGLS+HNIRA G+YI GT G+SNG+VPML+VF+ TARYVDQGGGKR GAFAIY
Sbjct: 370 ISKAAGGIGLSVHNIRAHGAYIKGTKGTSNGLVPMLRVFDVTARYVDQGGGKRPGAFAIY 429
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFE LDLRKN GKEE RARDLFY LW+PDLFMERV +D WSL CP GLA
Sbjct: 430 LEPWHADIFEVLDLRKNHGKEEARARDLFYGLWIPDLFMERVEEDRTWSLMCPDQCPGLA 489
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D G F LY +YE EGR K + A+ LWF IL+SQIETGTPYML+KD+CN KSNQQNL
Sbjct: 490 DCHGQAFRDLYLKYEREGRVKKTVRAQDLWFAILDSQIETGTPYMLYKDACNLKSNQQNL 549
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREK----------GVPVQSNVSKLV 470
GTIKSSNLCTEIV+++S EE AVCNLAS+ LP++V +K + + K
Sbjct: 550 GTIKSSNLCTEIVQYTSAEEVAVCNLASVVLPKFVVQKAGTGGKDDGQAADLTAQRGKRP 609
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
GS+ + FD + L VTK++ NLNK+ID N YP+ RSN RHRPIG+G+QGLADT
Sbjct: 610 GSKSRQELTFDHQALYNVTKVVVRNLNKVIDRNLYPVPEAERSNRRHRPIGLGVQGLADT 669
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
FI L LPF+SPEA+Q N++IFET+Y+ A +AS ELA K+GPYE+Y GSP S+G LQ D+W
Sbjct: 670 FIKLRLPFDSPEARQTNQEIFETMYFAASEASMELAKKEGPYESYPGSPASQGKLQFDLW 729
Query: 591 NITP-SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL 649
+TP S RWDW+ L++ I+++G+RNSLL+APMPTAST+QILG NEC EPYTSN+Y RRV
Sbjct: 730 GVTPQSGRWDWAGLKKEIAQHGLRNSLLLAPMPTASTAQILGYNECIEPYTSNLYARRVK 789
Query: 650 SGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKT 709
+GEFIVVN HLL+DLT GLW+ A++ ++ E GSV I +P+E+K IY+TVWEIKQK+
Sbjct: 790 AGEFIVVNPHLLEDLTAQGLWTPAVRNALVAEGGSVQNIPGLPQEMKEIYRTVWEIKQKS 849
Query: 710 LVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKF 769
L+DMAADRG YIDQSQSLN M +PD+ +LTS+HFY W +G+KTGMYYLRT+ AA+AI+F
Sbjct: 850 LIDMAADRGAYIDQSQSLNAFMAEPDYSRLTSMHFYGWKRGLKTGMYYLRTKPAANAIQF 909
Query: 770 TVDT 773
TVD+
Sbjct: 910 TVDS 913
>gi|150024560|ref|YP_001295386.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
psychrophilum JIP02/86]
gi|149771101|emb|CAL42568.1| Ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
psychrophilum JIP02/86]
Length = 806
Score = 1061 bits (2745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/783 (63%), Positives = 629/783 (80%), Gaps = 30/783 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDG KEPV FDKIT R+KKL YGL+ + D V VA +V G+Y GV T++LD LA
Sbjct: 1 MYVIKRDGHKEPVMFDKITERIKKLCYGLN-DLVDAVKVAMRVIEGLYDGVATSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+MT+ HPDYA LA R+A+SNLH T SFSET+ +MY+Y N R+G++A L++++V
Sbjct: 60 AETAASMTIAHPDYAQLAARIAISNLHSNTNKSFSETMNEMYHYVNPRNGQEAPLLSEEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ +I +NAA L+ IIY RDF++DYFGFKTLERSYLLK++ ++VERPQHMLMRVSVGIH
Sbjct: 120 HTVIQENAAFLNSHIIYTRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D S ++TY LMS+ +FTHATPTLFNAGTP+PQ+SSCFLL M+DDSI+GIYDTLK+ A
Sbjct: 180 NDLKSVIETYDLMSKKFFTHATPTLFNAGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHN+RA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FAIY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+E WHADIFEFLDL+KN GKEE RARDLF+A+W DLFM+RV ++G W+L CP++ GL
Sbjct: 300 IETWHADIFEFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVEENGDWTLMCPNECPGLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE +Y+ YE+ G+ + I A +LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 DVYGEEFEKMYTNYEKAGKGRKTIKAHELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++S +E AVCNLAS++LP ++ +N F
Sbjct: 420 GTIRSSNLCTEIMEYTSKDEIAVCNLASLSLPMFI--------------------ENGTF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ + L VTK +T NLNK+ID N+YP++ SN RHRPIG+G+QGLAD FI+L LPF S
Sbjct: 460 NHDLLFTVTKRVTRNLNKVIDRNYYPVKEGENSNKRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDR 597
+A++LN++IFET+Y+ A+ AS E+A+++GPY T+ GSP+S+G Q ++W + S R
Sbjct: 520 DQAKKLNQEIFETLYFAAVTASMEMAIEEGPYSTFAGSPISQGEFQYNLWGLKDEELSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW++LR+ + KNGVRNSLLVAPMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WDWANLRKEVMKNGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLL DL E GLW+ LK +++ ENGSV K++ IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLNDLVERGLWTEDLKQQLMRENGSVQKLN-IPQDLKELYKTVWEMSMKDIIDMSRQR 698
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G ++DQSQSLN+ M+ ++ KLTS+HFYAW G+KTGMYYLRT+AA DAIKFT LN
Sbjct: 699 GYFVDQSQSLNLFMQDANYSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFT-----LN 753
Query: 778 NEK 780
N+K
Sbjct: 754 NDK 756
>gi|323449664|gb|EGB05550.1| hypothetical protein AURANDRAFT_30730 [Aureococcus anophagefferens]
Length = 787
Score = 1061 bits (2745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/810 (60%), Positives = 631/810 (77%), Gaps = 23/810 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+KR+G+KE VR+DKIT+R+KKL YGL ++ P + QKV GVY GVTT +LDELA
Sbjct: 1 MQVVKRNGKKETVRYDKITSRIKKLCYGLDAKYIKPNQITQKVIQGVYDGVTTHELDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T A M HPD+++LA R++VSNLHK T +FS+ ++ ++ + + ++ K A+L++D+
Sbjct: 61 AQTTAYMATQHPDFSVLAARISVSNLHKSTDKTFSDVVEKLHKHVHPKTKKPAALISDET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y + K+ ++ AI+YDRDF++DYFGFKTLERSYL+++D + ERPQHM+MRV++GIH
Sbjct: 121 YATVQKHKDAINAAIVYDRDFEYDYFGFKTLERSYLMRLDGAIAERPQHMIMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD AL+TY +MSQ FTHATPTLFNAGTP+PQLSSCFLL MK+DSIEGIYDTLK+CA
Sbjct: 181 DDLAGALETYEMMSQKMFTHATPTLFNAGTPRPQLSSCFLLAMKEDSIEGIYDTLKRCAA 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLS+HNIRA+ SYI G+NG+SNGIVPML+V+NDTARYVDQGGGKRKG+FAIY
Sbjct: 241 ISKYAGGIGLSVHNIRATDSYIRGSNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI +LDL+KN G E RARDLFY LW+PDLFM+RV +G WSL CP++ GLA
Sbjct: 301 LEPWHADIETWLDLKKNHGNELERARDLFYGLWIPDLFMKRVEANGSWSLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D G EFE LY +YE EGRA+ I A++LWF IL+SQ+ETGTPYML+KD+CN KSNQ++L
Sbjct: 361 DCHGAEFEALYERYEAEGRARKAIPAQQLWFAILDSQVETGTPYMLYKDACNGKSNQKHL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIVE+++P+E AVCNLASI L +V GS D+ F
Sbjct: 421 GTIKSSNLCTEIVEYTAPDEIAVCNLASINLTAHVE--------------GSGDAAT--F 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L ++T+NLNK+IDVN+YP+E + SNL+HRPIGIG+QG+AD + L P+ES
Sbjct: 465 DFAKLKRTAYVVTKNLNKVIDVNYYPVEEAKSSNLKHRPIGIGVQGMADALVKLRYPYES 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+A+++NKD+FETIY+ A++AS +LA + GPY++Y GSP S+G+ Q D+WN+ PSDRWDW
Sbjct: 525 DDAKRINKDVFETIYFGAMEASIDLARELGPYDSYEGSPTSQGLFQFDLWNVKPSDRWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LR + ++G RNSLL+APMPTAST+QILGNNE FEP+TSN+YTRRVL+GEF VVNK+L
Sbjct: 585 EGLRARLGEHGCRNSLLLAPMPTASTAQILGNNESFEPFTSNMYTRRVLAGEFAVVNKYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL GLW+ ++ +II + GSV ++ IP++LKA+YKT WEIKQK ++DM+ADRG +
Sbjct: 645 LQDLIARGLWTSEIRNQIIADKGSVQGVAAIPDDLKALYKTTWEIKQKCVLDMSADRGAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
I QSQSLN+H+ P+ GKLTS+HFYAW KG+KTGMYYLRTR ADAI FTVD ++ +
Sbjct: 705 ICQSQSLNLHIADPNPGKLTSMHFYAWKKGLKTGMYYLRTRPKADAIAFTVDQAMAAKSR 764
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
A L + + EC++CG+
Sbjct: 765 GGAA-------LKPANGQQEEEHECLSCGA 787
>gi|157126851|ref|XP_001660977.1| ribonucleoside-diphosphate reductase large chain [Aedes aegypti]
gi|18087345|gb|AAL58843.1|AF411296_1 ribonucleotide reductase 1 [Aedes aegypti]
gi|108873131|gb|EAT37356.1| AAEL010644-PA [Aedes aegypti]
Length = 844
Score = 1060 bits (2741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/858 (58%), Positives = 640/858 (74%), Gaps = 69/858 (8%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKE V DKIT+R++KL YGL+ + DPV + KV G+Y GVTT +LD LA
Sbjct: 8 MYVFKRDGRKEEVHLDKITSRIQKLCYGLNMDFVDPVAITLKVINGLYSGVTTQELDNLA 67
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT H DYA+LA R+AVSNLHK TK FS+ + D+Y N+ K+ ++++
Sbjct: 68 AETAATMTTEHADYAILAARLAVSNLHKETKKHFSDVMHDLYMMENEHLKKRTPMISEFH 127
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++IM +A L+ AIIYDRDF ++YFGFKTLERSYLLK+ ++VERPQHMLMRV++GIH
Sbjct: 128 YKVIMDHADRLNSAIIYDRDFGYNYFGFKTLERSYLLKIKGKIVERPQHMLMRVAIGIHG 187
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ +FTHA+PT+F A T +PQLSSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 188 EDIDAAIETYNLLSERYFTHASPTMFAAATCRPQLSSCFLLTMSDDSIEGIYDTLKQCAL 247
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA G+YI GTNG SNG++PML+V+N+TA+YVDQGG KR GAFAIY
Sbjct: 248 ISKSAGGIGLNVHCIRAKGTYIAGTNGISNGLIPMLRVYNNTAKYVDQGGNKRPGAFAIY 307
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+FEFLDL+KN G E+ RARD+FYALW+PDLFM+RV + W L CP + GL+
Sbjct: 308 LEPWHGDVFEFLDLKKNTGAEDVRARDMFYALWIPDLFMKRVEANEDWCLMCPHECPGLS 367
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D+WG EFE LY+ YE EGR + A+ LWF I+ SQ+ETG PYML+KD+CNRKSNQQN+
Sbjct: 368 DTWGEEFEKLYTSYEAEGRYIRKVKAQDLWFAIIESQVETGVPYMLYKDACNRKSNQQNI 427
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+SS +E AVCNLASIAL +V+ ++ +
Sbjct: 428 GTIKCSNLCTEIVEYSSKDEIAVCNLASIALNMFVK-------------------PDKTY 468
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EV KI T+NLNKIID+N YP+ +RSN+RHRPIGIG+QG+AD FIL+ P++S
Sbjct: 469 DFQKLKEVAKIATKNLNKIIDINFYPVPEAKRSNMRHRPIGIGVQGMADAFILMRYPYDS 528
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ+LN+ IFETIYY AL+AS ELA K+G YETY G P+SKG+LQ DMWN P+D WDW
Sbjct: 529 EEAQKLNQQIFETIYYGALEASCELAEKEGTYETYPGCPVSKGVLQYDMWNKEPTDMWDW 588
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+E I+K+GVRNSLL+APMPTAST+QILGNNE FEPYTSN+Y RRVLSGEF +VN HL
Sbjct: 589 AALKEKIAKHGVRNSLLLAPMPTASTAQILGNNESFEPYTSNVYNRRVLSGEFQIVNHHL 648
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTEL LW +K +II NGS+ I EIP+ ++ +YKTVWEI K+ + MAADRG +
Sbjct: 649 LKDLTELDLWDDDMKNRIIANNGSIQNIEEIPQHIRDLYKTVWEISVKSCIKMAADRGAF 708
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQS NIH+ +P++GKLTS+HFY W G+KTGMYYLRT+ A +AI+FTVD + LN +
Sbjct: 709 IDQSQSFNIHVAEPNYGKLTSIHFYGWKMGLKTGMYYLRTKPAVNAIQFTVDKTRLN--Q 766
Query: 781 ANRADNDVEAN------------------------------------------------L 792
+NR +N N +
Sbjct: 767 SNRINNSDTVNGSPSKMNGATSTPSKMNGTATSSASPVKASSDNSQQQLNGSHAERNRRM 826
Query: 793 AQVVCSLKNQEECMACGS 810
A++VCSL+N+E+CM CGS
Sbjct: 827 AEMVCSLENKEDCMMCGS 844
>gi|313233631|emb|CBY09802.1| unnamed protein product [Oikopleura dioica]
gi|313245650|emb|CBY40318.1| unnamed protein product [Oikopleura dioica]
Length = 832
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/848 (59%), Positives = 639/848 (75%), Gaps = 57/848 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+ V KRDGR E V FDKIT+R+KKL Y L P+ V +KV G+Y GVTT +LD LA
Sbjct: 4 LKVKKRDGRLEEVFFDKITSRIKKLCYNLDMNILSPLSVTRKVIDGIYDGVTTVELDNLA 63
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNY--YNKRSGKKASLVAD 118
AETAA M+VNHPDYA+LA R++VSNLHK TK F+E I+D+ N YN GKK L+++
Sbjct: 64 AETAAQMSVNHPDYAILAARISVSNLHKETKKLFTEVIEDLRNVEGYN---GKKKPLISE 120
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
Y+I++ N L+ A+I+DRD++++YFGFKTLERSYL+K+D + +ERPQHMLMRVSVGI
Sbjct: 121 KTYKIVVANKDKLNSAVIHDRDYEYNYFGFKTLERSYLMKIDGKTIERPQHMLMRVSVGI 180
Query: 179 HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
H +D D+AL+TY+ MS +FTHA+PTLFN+GTP+PQ+SSCFL+ M+DDSIEGIYDTLK C
Sbjct: 181 HGEDIDAALETYNFMSLKYFTHASPTLFNSGTPRPQMSSCFLVAMQDDSIEGIYDTLKTC 240
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIG+++HNIRA GSYI GTNG SNG++PML+V+N+TARYVDQGG KR GAFA
Sbjct: 241 ALISKNAGGIGVNVHNIRARGSYIGGTNGHSNGLIPMLRVYNNTARYVDQGGNKRPGAFA 300
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
+YLEPWHADIFEFLD +KN G EE RARDLFYALW+PDLFM+RV +G W+LFCP +A G
Sbjct: 301 VYLEPWHADIFEFLDAKKNTGSEETRARDLFYALWIPDLFMKRVESNGDWTLFCPDEAPG 360
Query: 359 LADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQ 418
L + WG EFE L+ +YE+EGR K I A+ LW++I+ +QIE G PYML+KD+CNRKSNQQ
Sbjct: 361 LHECWGEEFEALFEKYEKEGRGKETIKAQALWYKIIEAQIEVGVPYMLYKDACNRKSNQQ 420
Query: 419 NLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNR 478
NLGTIK SNLCTEIVE+SS +E AVCNLAS++LP ++R+ D
Sbjct: 421 NLGTIKCSNLCTEIVEYSSKDEVAVCNLASLSLPAFIRKN---------------DQGFS 465
Query: 479 LFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
++DF+ L + TKI+T NLNK+ID+N YP+E R SN++HRPIGIG+QGLADTF +L L F
Sbjct: 466 VYDFQDLYDKTKIVTRNLNKVIDINFYPVEQARFSNMQHRPIGIGVQGLADTFCMLKLAF 525
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFG------------SPMSKGILQ 586
ES EA+ LNK IFETIY+ A++AS ELA K+GPY ++ SPM++G Q
Sbjct: 526 ESDEAKLLNKQIFETIYFAAVEASCELAEKEGPYLSFRAHTHPITGQKNPDSPMAQGKFQ 585
Query: 587 VDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTR 646
D+W +TP+D WDW SLRE ++++GVRNSLLV+PMPTAST+QILGNNE EP+T+NIYTR
Sbjct: 586 FDLWGVTPTDLWDWDSLREKVTRHGVRNSLLVSPMPTASTAQILGNNESIEPFTNNIYTR 645
Query: 647 RVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIK 706
RVLSGEF VVN HLL++LTE+ W ++ +I+ +NGS+ + +IP ++K Y+TVWEIK
Sbjct: 646 RVLSGEFQVVNPHLLRELTEINYWDDEIRQQIVQDNGSIQNL-DIPADIKERYRTVWEIK 704
Query: 707 QKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADA 766
QK ++ MAADRG +IDQSQSLNIH+ QP +G LTS+HF W G+KTGMYYLRT+ AA A
Sbjct: 705 QKNVLQMAADRGPFIDQSQSLNIHVAQPKYGTLTSMHFTGWKMGLKTGMYYLRTKPAAAA 764
Query: 767 IKFTVDTSVLNNEKANRADNDVEA------------------------NLAQVVCSLKNQ 802
IKFTVD S + E+ + +EA N A +VCSL+N+
Sbjct: 765 IKFTVDKSKVKVEEKENVEVKIEAATKSPVKAVSSLKEGPSEDDIRRLNEAALVCSLENK 824
Query: 803 EECMACGS 810
E CM C S
Sbjct: 825 EACMMCSS 832
>gi|58267480|ref|XP_570896.1| ribonucleoside-diphosphate reductase large chain [Cryptococcus
neoformans var. neoformans JEC21]
gi|134112167|ref|XP_775272.1| hypothetical protein CNBE3330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257927|gb|EAL20625.1| hypothetical protein CNBE3330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227130|gb|AAW43589.1| ribonucleoside-diphosphate reductase large chain, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 863
Score = 1058 bits (2736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/781 (61%), Positives = 610/781 (78%), Gaps = 18/781 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M++ KRDGRKEPV FDK+TAR+ KLSYGL +P + QKV G++ G+TT +LD LA
Sbjct: 3 MWIYKRDGRKEPVAFDKVTARINKLSYGLDPNFVEPAEITQKVVQGIHAGITTVELDNLA 62
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+A+SNLHK TK FS + D++ + N ++GK + ++ DDV
Sbjct: 63 AETAAYLTTKHPDYAILAARIAISNLHKETKKVFSAVVHDLHAWVNPKTGKHSPMIDDDV 122
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+M N LD AIIYDRDF ++YFGFKTLERSYLL+++ ++VERPQHM+MRV+VGIH
Sbjct: 123 YKIVMDNKDILDSAIIYDRDFAYNYFGFKTLERSYLLRINGKIVERPQHMIMRVAVGIHG 182
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+ D ++TY+LMS+ +FTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSI+GIYDTLK CA
Sbjct: 183 SNIDKVIETYNLMSERYFTHASPTLFNAGTPRPQMSSCFLVAMKDDSIDGIYDTLKTCAQ 242
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIRA GSYI GTNG SNGI+PML+ ++ TARYVDQGG KR GAFAIY
Sbjct: 243 ISKTAGGIGLHIHNIRAKGSYIAGTNGYSNGIIPMLRAYDATARYVDQGGNKRPGAFAIY 302
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F+F+DLRKN GKEE RARDLFYALW+PDLFM+RV DG W+L CP++ GLA
Sbjct: 303 LEPWHADVFDFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVESDGDWTLMCPAECPGLA 362
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY YE +G+ + I A+KLWF IL +Q ETG PY+ +KD+ N KSNQ+ L
Sbjct: 363 DVYGEEFEKLYESYERKGKGRKTIKAQKLWFAILEAQTETGVPYICYKDAANSKSNQKQL 422
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+SSP+E AVCNLAS+ALP +V D + R++
Sbjct: 423 GTIKSSNLCTEIMEYSSPDEVAVCNLASLALPAFV------------------DLERRVY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L E+TK++T+NL+ +I N+YP+ R SN+RHRP+G+G+QGLAD F+ L +PF+S
Sbjct: 465 DFKKLHEITKVVTKNLDTVITRNYYPVPEARNSNMRHRPVGLGVQGLADAFMALRMPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA++LN IFETIY+ AL+AS ELA + G YE+Y GSP+SKGILQ DMW P+D WDW
Sbjct: 525 PEARELNIQIFETIYHAALEASCELAEEFGTYESYEGSPISKGILQYDMWGRVPTDLWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+ I+++GVRNSLLVAPMPTASTSQILG NECFEPYTS +Y RRVLSG+F VV L
Sbjct: 585 TELKAKIAQHGVRNSLLVAPMPTASTSQILGWNECFEPYTSMLYARRVLSGDFQVVCPWL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL L LW +K II GS+ I IP++LK IY+TVWEI QK ++D+AADRG +
Sbjct: 645 LRDLINLDLWDDNMKQLIIAAGGSIQSIPNIPDDLKKIYRTVWEISQKAVIDLAADRGAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ P +LTS+HFY W +G+KTG YYLRTR +A+AI+FTVD S L K
Sbjct: 705 IDQSQSLNIHLSNPSFPQLTSMHFYGWKRGLKTGCYYLRTRPSANAIQFTVDASTLKTAK 764
Query: 781 A 781
+
Sbjct: 765 S 765
>gi|323308679|gb|EGA61920.1| Rnr3p [Saccharomyces cerevisiae FostersO]
Length = 887
Score = 1057 bits (2734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/777 (62%), Positives = 614/777 (79%), Gaps = 17/777 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDG KEPV+FDKIT+R+ +LSYGL D V V Q++ +GVY GVTT +LD LA
Sbjct: 17 MYVIKRDGXKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 76
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ I+D++++ N +GK A +++D++
Sbjct: 77 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 136
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ V ERPQH++MRV++GIH
Sbjct: 137 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 196
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +S LKTY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 197 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 256
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+GL I+NIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA++
Sbjct: 257 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 316
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RK GKEE RARDLF ALW+PDLFM+RV++DG W+LF PS A GL
Sbjct: 317 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSXAPGLD 376
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLF-KDSCNRK-SNQQ 418
D WG EFE LY++YE EGR K I A+KLW+ IL +Q ETG + F KD+C ++ NQQ
Sbjct: 377 DVWGDEFEELYTRYEREGRGK-TIKAQKLWYAILQAQTETGNTFPWFYKDACKQEGQNQQ 435
Query: 419 NLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNR 478
NLGTIKSSNLC EIVE+SSP+ETAVCNLASIALP +V S D K
Sbjct: 436 NLGTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTA 481
Query: 479 LFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
++FERL E+ K+IT NLN++ID N+YP+ R SN++HRPI +G+QGLADT ++L LPF
Sbjct: 482 SYNFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTXMMLRLPF 541
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW 598
ES EAQ LNK IFETIY+ L+AS ELA K+G Y T+ GSP SKGILQ DMWN P W
Sbjct: 542 ESEEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMW 601
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
DW +LR+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN
Sbjct: 602 DWETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNP 661
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
+LL+DL +LG+W ++K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR
Sbjct: 662 YLLRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRA 721
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
YIDQS SLN+ ++ P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D V
Sbjct: 722 IYIDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 778
>gi|340715220|ref|XP_003396116.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Bombus terrestris]
Length = 821
Score = 1057 bits (2734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/836 (62%), Positives = 631/836 (75%), Gaps = 47/836 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKE V FDKIT+R++KL Y L ++ DP + +V +G+Y GVTT +LD LA
Sbjct: 7 MYVIKRDGRKEDVHFDKITSRIQKLCYNLDMDYVDPSAITFRVISGLYSGVTTVELDNLA 66
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+A+SNLHK TK SFSE I +YN + + ++ +
Sbjct: 67 AETAATMTTKHPDYAILAARIAISNLHKETKKSFSEVIHSLYNVKEHYTNEVRPVINEKY 126
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y II NA L+ AIIYDRDF ++YFGFKTLERSYLLK+ +VVERPQHMLMRV+V IH
Sbjct: 127 YNIIQNNANKLNSAIIYDRDFSYNYFGFKTLERSYLLKIQGKVVERPQHMLMRVAVAIHG 186
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D A++TY+ +S+ +FTHA+P+LF A T Q Q+SSCFLL M DDSI+GIYDTLK+CA+
Sbjct: 187 EDIDKAIETYNFLSERYFTHASPSLFFACTRQQQMSSCFLLTMSDDSIDGIYDTLKRCAL 246
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA G+ I GT G SNG++PML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 247 ISKSAGGIGLNVHCIRARGTPIAGTLGVSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 306
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDL+KN GKEE RAR+LFYALW+PDLFM+RV D+G WSL CP ++ GL
Sbjct: 307 LEPWHADIFEFLDLKKNIGKEENRARELFYALWIPDLFMKRVLDNGVWSLMCPHESPGLP 366
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE E R K I AR LW IL SQ+ETGTPYML+KD CNRKSN QNL
Sbjct: 367 DVWGDEFEALYTRYETEKRYKRQIQARDLWTAILISQVETGTPYMLYKDHCNRKSNHQNL 426
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIV++SSP+E AVCNLASIA+ +V +S N+ F
Sbjct: 427 GTIKSSNLCTEIVQYSSPDEIAVCNLASIAVNMFV------------------NSSNQTF 468
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L +VTKI+T NL+KIIDVN+YP+ + SN +HRPIGIGIQGLAD F+L+ PFES
Sbjct: 469 DFEKLRKVTKIVTCNLDKIIDVNYYPVPEAKTSNFKHRPIGIGIQGLADAFLLMRYPFES 528
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ+LN IFET+YY AL+AS ELA + G YETY GSP+SKGILQ DMWN+TP+D W+W
Sbjct: 529 EEAQKLNIQIFETLYYGALEASCELAAEKGTYETYEGSPVSKGILQYDMWNVTPTDLWNW 588
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+E I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY RRVLSGEF VVN HL
Sbjct: 589 TILKEKIAKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYARRVLSGEFQVVNPHL 648
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLTE LW +K +II NGSV I IP +LK +YKTVWEI QK ++ MAADRG +
Sbjct: 649 LRDLTERDLWDENMKNEIIANNGSVQNIERIPNDLKMLYKTVWEIPQKIILKMAADRGAF 708
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL---- 776
IDQSQS+N+HM +P KLTS+HFY W G+KTGMYYLRT+ A +A++FTVD S L
Sbjct: 709 IDQSQSMNVHMAKPTAEKLTSMHFYGWKMGLKTGMYYLRTKPAVNALQFTVDKSKLQNTI 768
Query: 777 -------------NNEKANRADN---------DVEANLAQVVCSLKNQEECMACGS 810
N+E+ N +N ++EA A CS +N + CMACGS
Sbjct: 769 STTSNQSVNSECNNDEELNSTENKWLQNQSSENIEAVFA---CSRENGDACMACGS 821
>gi|408491218|ref|YP_006867587.1| ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Psychroflexus torquis ATCC 700755]
gi|408468493|gb|AFU68837.1| ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Psychroflexus torquis ATCC 700755]
Length = 815
Score = 1057 bits (2733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/805 (61%), Positives = 629/805 (78%), Gaps = 28/805 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G+KEPV FDKITAR++KL YGL+ +P VA +V G+Y GVTT++LD LA
Sbjct: 1 MHVIKRNGQKEPVMFDKITARIRKLCYGLNP-LVEPAKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE +A MTV+HPDYA LA R++VSNLHK TK SFSE + D+Y Y N R+ KK+ L+ADDV
Sbjct: 60 AEISATMTVSHPDYAQLAARISVSNLHKNTKKSFSEVMADLYEYVNPRNNKKSPLIADDV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++I ++ LD IIY RDF++DYFGFKTLERSYLLK++ ++ ERPQHMLMRVS+GIH
Sbjct: 120 YKVIEEHKDELDSRIIYSRDFNYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSLGIHG 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +S L+TY LMS+ +FTHATPTLFN+GTP+PQ+SSCFLL M+DDSI+GIYDTLK+ A
Sbjct: 180 EDLESVLETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMQDDSIDGIYDTLKQTAR 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IS+SAGGIGLSIHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIAGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF FLDL+KN G EE RARDLFYA+W+PDLFM+RV ++ W+L CP++ L
Sbjct: 300 VEPWHADIFSFLDLKKNHGAEEMRARDLFYAMWIPDLFMKRVEENSTWTLMCPNECPNLY 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ EF+ LY +YE+E + + I AR+LW +IL SQIETGTPYML+KD+ NRKSNQ+NL
Sbjct: 360 NVHSEEFDELYLKYEQENKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E++SP+E AVCNLASIALP +V KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFV--------------------KNGEF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ L ++TK I +NLNK+ID N+YP++ SN RHRP+G+GIQGLAD FI+L +PF S
Sbjct: 460 QHKELYKITKQIIKNLNKVIDRNYYPVKEAENSNFRHRPVGLGIQGLADAFIMLRMPFTS 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD---R 597
EA++LN++IFET+Y+ A+++S ELA +GPY ++ GSP+SKG Q ++W +T +D R
Sbjct: 520 DEAKKLNQEIFETLYFAAVESSMELAKIEGPYSSFEGSPISKGEFQFNLWGLTDNDTSGR 579
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
W+WS LRE + K+GVRNSLL+APMPTASTSQILGNNE FEPYTSNIYTRRVLSGEFIVVN
Sbjct: 580 WNWSKLREKVMKHGVRNSLLMAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KHLLKDL LGLW LK I+ NGSV I IP+++K +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLKDLVSLGLWDDDLKDAIMRANGSVQGIDIIPDDIKELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQSLN+ ME KLTS+HFYAW G+KTGMYYLRT++A DAIKFT+ +
Sbjct: 700 GYFIDQSQSLNLFMEGATFAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLKSE--- 756
Query: 778 NEKANRADNDVEANLAQVVCSLKNQ 802
+K A + V N A+ ++Q
Sbjct: 757 -KKEKEAPSQVVQNAAKTYEEAQSQ 780
>gi|68525530|ref|XP_723625.1| ribonucleoside-diphosphate reductase large chain [Plasmodium yoelii
yoelii 17XNL]
gi|23477980|gb|EAA15190.1| ribonucleoside-diphosphate reductase large chain [Plasmodium yoelii
yoelii]
Length = 847
Score = 1056 bits (2730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/824 (60%), Positives = 633/824 (76%), Gaps = 36/824 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+ R G +E + FD+I R+++LSYGL E DP V Q V G+Y G+ T +LDELA
Sbjct: 42 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 100
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T A M HPD+++LA R+ NLHK T + ++ + +Y+Y + R G+ ASL++ +V
Sbjct: 101 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDIAKVAEALYSYKDIR-GRSASLISKEV 159
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ IM++ L+ I Y RDF++DYFGFKTLERSYLL+++++++ERPQH+LMRVS+GIH
Sbjct: 160 YDFIMEHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHI 219
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + AL+TYHLMSQ +FTHATPTLFN+GTP+PQ+SSCFLL MK DSIEGI++TLK+CA+
Sbjct: 220 DDLEKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKSDSIEGIFETLKQCAL 279
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+++ +IR SYI GTNG SNG+VPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 280 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 339
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+DIFEFLDLRKN GKEE RARDLFYA+WVPDLFM+RV+++ W+L CP++ GL+
Sbjct: 340 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAIWVPDLFMKRVKENRNWTLMCPNECPGLS 399
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+SWG EFE LY++YEEE K + A+ LWF IL SQIETG PYML+KD+CN KSNQ+NL
Sbjct: 400 ESWGEEFEKLYTKYEEENLGKKTVLAQDLWFAILQSQIETGVPYMLYKDACNSKSNQKNL 459
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLC EI+E++SP+E AVCNLASIAL ++V D + + F
Sbjct: 460 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DREKKEF 501
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L ++TKIIT NL+KII+ N+YPI+ +SN RHRPIGIG+QGLADTF+LL P+ES
Sbjct: 502 DFKKLYDITKIITRNLDKIIERNYYPIKEAEKSNKRHRPIGIGVQGLADTFMLLRYPYES 561
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-WD 599
EA++LNK IFET+YY AL+ S ELA GPYE+Y GSP S+GILQ DMWN+ ++ WD
Sbjct: 562 DEAKELNKRIFETMYYAALEMSVELAQIHGPYESYKGSPASQGILQFDMWNVKVDNKYWD 621
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L++ IS +G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 622 WDLLKKKISMHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 681
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDL + GLW +K ++I NGSV ISEIP +LK +YKTVWEIKQK ++DMAADRG
Sbjct: 682 LLKDLFDRGLWDEDMKQQLIAHNGSVQYISEIPADLKELYKTVWEIKQKNIIDMAADRGV 741
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN- 778
+IDQSQSLNI++++P KL+S+HFY W KG+KTG YYLRT+AA DAIKFTVDT V N
Sbjct: 742 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTQVAKNA 801
Query: 779 EKANRADN------------DVEANLAQVVCSLK--NQEECMAC 808
EK AD E+ + Q C L+ N E C+ C
Sbjct: 802 EKLKNADGVAITREVSRETISTESTVTQNACPLRRNNDEPCLMC 845
>gi|328875304|gb|EGG23669.1| ribonucleotide reductase large subunit [Dictyostelium fasciculatum]
Length = 942
Score = 1055 bits (2727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/802 (62%), Positives = 621/802 (77%), Gaps = 36/802 (4%)
Query: 1 MYVIKRDG-----------------RKE-PVRFDKITARLK---KLSYGLSKEHCDPVLV 39
M+V+KRDG +KE V++DKIT RL+ L L DP +
Sbjct: 74 MFVVKRDGTRVAVCNRPTSTQLYFYKKEIDVKYDKITTRLQYLCDLEPKLDTNIIDPSEI 133
Query: 40 AQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIK 99
QKV +GV+ GV TT+LD LAAETAA M+ HPDYA+LA R+AVSNLHK T SF ET+K
Sbjct: 134 TQKVASGVFPGVKTTELDNLAAETAAYMSTKHPDYAVLAARIAVSNLHKQTHESFLETVK 193
Query: 100 DMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM 159
+ Y + ++G A LV+D++ + K+ ++ AI Y RDF++D+FGFKTLERSYL ++
Sbjct: 194 LQHGYVSPKTGAPAPLVSDEILALANKHVDRIEAAIKYTRDFEYDFFGFKTLERSYLHRV 253
Query: 160 DSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCF 219
+ ++ERPQH+LMRVS+GIH DD D+A+ TY +S +FTHATPTLFNAGT PQ+SSCF
Sbjct: 254 NDMIIERPQHLLMRVSLGIHGDDIDAAIDTYDQLSNRYFTHATPTLFNAGTNSPQMSSCF 313
Query: 220 LLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVF 279
L+ MKDDSIEGIYDTLK+CA+ISKSAGGIG+++H IRA+ SYI GTNG+SNG+VPML+VF
Sbjct: 314 LVQMKDDSIEGIYDTLKQCALISKSAGGIGIAVHKIRAARSYIRGTNGTSNGLVPMLRVF 373
Query: 280 NDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFM 339
NDTARYVDQGGGKRKGAFA+YLEPWH+DIFEFLDL+KN GKEE RARDLFYALWV DLFM
Sbjct: 374 NDTARYVDQGGGKRKGAFAVYLEPWHSDIFEFLDLKKNHGKEEMRARDLFYALWVSDLFM 433
Query: 340 ERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEE-EGRAKMVISARKLWFEILNSQI 398
ERV + +WSLFCP++A GLAD +G +F LY YE+ G A+ V+ A+ LWF I++SQI
Sbjct: 434 ERVEQNAEWSLFCPNEAPGLADCYGDKFRDLYLSYEQTPGLARKVVKAQDLWFAIIDSQI 493
Query: 399 ETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREK 458
ETGTPY+L+KD+CN KSNQ+NLGTI+ SNLCTEI++++S +E AVCNLASIALP++V+
Sbjct: 494 ETGTPYILYKDACNEKSNQKNLGTIQCSNLCTEIIQYTSADEVAVCNLASIALPKFVKR- 552
Query: 459 GVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHR 518
S S FD LAE+T+IIT NLNKIID N YP+E RRSN+RHR
Sbjct: 553 -------------SSPSAVASFDHNHLAEITRIITRNLNKIIDRNFYPVEEARRSNMRHR 599
Query: 519 PIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGS 578
P GIGIQGLAD FI L +PF+SP A LNK+I ETIYY +L AS +LA +DGPYET+ GS
Sbjct: 600 PTGIGIQGLADVFIALRMPFDSPAAAVLNKEIAETIYYASLDASCQLAERDGPYETFAGS 659
Query: 579 PMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
P S+GILQ DMW++ PS RWDW++L++ I K+G+RNSLLVAPMPTASTSQILGNNECFEP
Sbjct: 660 PASQGILQFDMWDVQPSARWDWAALKQRIVKHGLRNSLLVAPMPTASTSQILGNNECFEP 719
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
YTSNIY+R+VL+GEF VVNK LL+DL LGLW+ +K +II GSV + IP++LK +
Sbjct: 720 YTSNIYSRKVLAGEFTVVNKQLLQDLMALGLWTPEMKNQIIANRGSVQNVQGIPDDLKEL 779
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
YK+ WEI+Q+TL+DMAADRG +IDQSQS N+ + +P+ KLTS+HFYAW KG+KTGMYYL
Sbjct: 780 YKSAWEIRQRTLIDMAADRGAFIDQSQSFNVFIAEPNFAKLTSMHFYAWKKGLKTGMYYL 839
Query: 759 RTRAAADAIKFTVDTSVLNNEK 780
RTRAAADAI+FTVD +L K
Sbjct: 840 RTRAAADAIQFTVDQQMLTQTK 861
>gi|221059988|ref|XP_002260639.1| ribonucleoside-diphosphate reductase, large subunit [Plasmodium
knowlesi strain H]
gi|193810713|emb|CAQ42611.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Plasmodium knowlesi strain H]
Length = 848
Score = 1054 bits (2726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/825 (60%), Positives = 630/825 (76%), Gaps = 37/825 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+ R G +E + FD+I R+++LSYGL E DP V Q V G+Y G+ T +LDELA
Sbjct: 42 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 100
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T A M HPD+++LA R+ NLHK T + +E + +Y Y + R G+ ASL++ +V
Sbjct: 101 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDIAEVAEALYMYKDVR-GRPASLISKEV 159
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ ++++ L+ I Y RDF++DYFGFKTLERSYLL+++ +++ERPQH+LMRVS+GIH
Sbjct: 160 YDFMIQHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINGKIIERPQHLLMRVSIGIHI 219
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D + AL+TYHLMSQ +FTHATPTLFN+GTP+PQ+SSCFLLCMK DSIEGI++TLK+CA+
Sbjct: 220 GDLEKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLCMKSDSIEGIFETLKQCAL 279
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+++ +IR SYI GTNG SNG+VPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 280 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 339
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+DIFEFLDLRKN GKEE RARDLFYA+WVPDLFM+RV+++ W+L CP++ GL+
Sbjct: 340 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENQNWTLMCPNECPGLS 399
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+SWG EFE LY +YEEEG K + A+ LWF IL SQIETG PYML+KDSCN KSNQ+NL
Sbjct: 400 ESWGAEFEKLYLKYEEEGMGKKTVLAQDLWFAILQSQIETGVPYMLYKDSCNAKSNQKNL 459
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLC EI+E++SP+E AVCNLASIAL ++V D R F
Sbjct: 460 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DVDKREF 501
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+TKIIT NL++II+ N+YP++ RSN RHRPIGIG+QGLADTF+LL P+ES
Sbjct: 502 NFKKLYEITKIITRNLDQIIERNYYPVQEAERSNKRHRPIGIGVQGLADTFMLLRYPYES 561
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-WD 599
A++LNK IFET+YY AL+ S ELA GPYETY GSP S+GILQ DMWN+ ++ WD
Sbjct: 562 DSAKELNKRIFETMYYAALEMSMELAQIYGPYETYQGSPASQGILQFDMWNVKVDNKYWD 621
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L+E I K+G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 622 WDKLKEKIKKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 681
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDL + GLW +K ++I NGSV ISEIP +LK +YKTVWEIKQK ++DMAADRG
Sbjct: 682 LLKDLFDRGLWDEDMKQQLIAHNGSVQYISEIPNDLKELYKTVWEIKQKNIIDMAADRGA 741
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN- 778
+IDQSQSLNI++++P KL+S+HFY W KG+KTG YYLRT+AA DAIKFTVDT V N
Sbjct: 742 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTQVAKNA 801
Query: 779 ------------EKANRADNDVEANLAQ-VVCSLKNQ--EECMAC 808
+ +R E+ + Q VVC L+ ++C+ C
Sbjct: 802 AKMKNEEGVAITREVSRETISTESTVTQNVVCPLRRNKDDQCLMC 846
>gi|156101822|ref|XP_001616604.1| ribonucleoside-diphosphate reductase large chain [Plasmodium vivax
Sal-1]
gi|148805478|gb|EDL46877.1| ribonucleoside-diphosphate reductase large chain, putative
[Plasmodium vivax]
Length = 848
Score = 1054 bits (2725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/825 (60%), Positives = 630/825 (76%), Gaps = 37/825 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+ R G +E + FD+I R+++LSYGL E DP V Q V G+Y G+ T +LDELA
Sbjct: 42 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 100
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T A M HPD+++LA R+ NLHK T + E + +Y Y + R G+ ASL++ +V
Sbjct: 101 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDIGEVAEALYKYTDVR-GRPASLISKEV 159
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE ++++ L+ I Y RDF++DYFGFKTLERSYLL+++ +++ERPQH+LMRVS+GIH
Sbjct: 160 YEFMIEHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINGKIIERPQHLLMRVSIGIHI 219
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D + AL+TYHLMSQ +FTHATPTLFN+GTP+PQ+SSCFLLCMK DSIEGI++TLK+CA+
Sbjct: 220 GDLEKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLCMKSDSIEGIFETLKQCAL 279
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+++ +IR SYI GTNG SNG+VPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 280 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 339
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+DIFEFLDLRKN GKEE RARDLFYA+WVPDLFM+RV+++ W+L CP++ GL+
Sbjct: 340 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPNECPGLS 399
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+SWG EFE LY++YEEE K + A+ LWF IL SQIETG PYML+KDSCN KSNQ+NL
Sbjct: 400 ESWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPYMLYKDSCNAKSNQKNL 459
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLC EI+E++SP+E AVCNLASIAL ++V D + R F
Sbjct: 460 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DVEKREF 501
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+TKIIT NL++II+ N+YP+E +RSN RHRPIGIG+QGLADTF+LL P+ES
Sbjct: 502 NFKKLYEITKIITRNLDQIIERNYYPVEEAKRSNKRHRPIGIGVQGLADTFMLLRYPYES 561
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-WD 599
A++LNK IFET+YY AL+ S ELA GPYETY GSP S+GILQ DMWN+ + WD
Sbjct: 562 DSAKELNKRIFETMYYGALEMSMELAQLYGPYETYQGSPASQGILQFDMWNVKVDKKYWD 621
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L+ I K+G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 622 WDELKAKIKKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 681
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDL + GLW +K ++I NGSV ISEIP +LK +YKTVWEIKQK ++DMAADRG
Sbjct: 682 LLKDLFDRGLWDEDMKQQLIAHNGSVQYISEIPADLKELYKTVWEIKQKNIIDMAADRGA 741
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN- 778
+IDQSQSLNI++++P KL+S+HFY W KG+KTG YYLRT+AA DAIKFTVDT V N
Sbjct: 742 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTQVAKNA 801
Query: 779 ------------EKANRADNDVEANLAQ-VVCSLK--NQEECMAC 808
+ +R ++ + Q VVC L+ N ++C+ C
Sbjct: 802 AKMKNAEPVAITREVSRETISTDSTVTQNVVCPLRRNNDDQCLMC 846
>gi|442750421|gb|JAA67370.1| Putative ribonucleotide reductase alpha subunit [Ixodes ricinus]
Length = 762
Score = 1053 bits (2724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/772 (64%), Positives = 625/772 (80%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGR++ V FDKITAR++KL YGL+++ D +A+KV G+Y+GVTT +LD LA
Sbjct: 1 MFVVKRDGRRQTVYFDKITARIQKLCYGLNQDFVDSCSIAKKVINGLYEGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYALLA R+AVSNLHK TK SFSE I ++Y+ N+ + ++ +++
Sbjct: 61 AETAATMTTKHPDYALLAARIAVSNLHKETKKSFSEVISNLYHMINESNNLHTPMIDEEI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+M+NA + AI+YDRDF+++YFGFKTLER+YLL+++ +VVERPQHMLMRVS+GIH
Sbjct: 121 YKIVMENADTFNSAIVYDRDFNYNYFGFKTLERAYLLRINGKVVERPQHMLMRVSIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + L+TY+LMS+ WFTHA+PTLFN+GTP+PQLSSCFLL MK DSIEGIYDTLK+CA+
Sbjct: 181 NDLKNVLETYNLMSEKWFTHASPTLFNSGTPRPQLSSCFLLQMKSDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++HNIRA+GSYI G+NG S+GIVPML+V+N+TARYVDQGG KR GA AIY
Sbjct: 241 ISKSAGGIGLNVHNIRAAGSYIAGSNGKSSGIVPMLRVYNNTARYVDQGGNKRPGAIAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F+FLDL+KN GKEE RARDLFYALW+PDLFMERV + WSL CP+D GL
Sbjct: 301 LEPWHADVFDFLDLKKNTGKEENRARDLFYALWIPDLFMERVEKNETWSLMCPNDCPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G +FE LY++YE E R + A+KLW+ I+ SQ ETGTPYML+KD+CN KSNQ+N+
Sbjct: 361 DVYGKKFEQLYTKYESEKRYIRQVPAQKLWYAIVESQTETGTPYMLYKDACNEKSNQKNI 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLASIAL R+VR N F
Sbjct: 421 GTIKCSNLCTEIVEYTSDKEVAVCNLASIALNRFVR--------------------NGHF 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L V++IIT NLN+II+ N YPI + SN+RHRPIGIG+QGLADTFILL LPF+S
Sbjct: 461 DFEQLRRVSRIITVNLNRIIERNFYPIPEAKLSNMRHRPIGIGVQGLADTFILLRLPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN+ IFETIYY AL+ S ELA GPYETY GSP+SKG+LQ DMW + P++ WDW
Sbjct: 521 EEARLLNRQIFETIYYGALEQSCELAKNLGPYETYPGSPVSKGLLQYDMWGVKPTEMWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+SL++ I K GVRNSLLVAPMPTAST+QILGNNE EPYT+N+YTRRVLSGEF VVN HL
Sbjct: 581 TSLKKQIVKYGVRNSLLVAPMPTASTAQILGNNESIEPYTTNVYTRRVLSGEFQVVNYHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLT+ GLW+ LK +I +GSV K++ IP++LK +Y+TVWEI QK +++MAADRG +
Sbjct: 641 LKDLTDRGLWNDELKNALIANHGSVQKLN-IPDDLKHLYRTVWEIPQKHILEMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQSLNIH+ QP + K+TS+HF+ W G+KTGMYYLRT+ AA+AI+FTVD
Sbjct: 700 IDQSQSLNIHIAQPTYSKITSMHFFGWKLGLKTGMYYLRTKPAANAIQFTVD 751
>gi|405120842|gb|AFR95612.1| ribonucleoside-diphosphate reductase large chain [Cryptococcus
neoformans var. grubii H99]
Length = 863
Score = 1053 bits (2723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/780 (61%), Positives = 608/780 (77%), Gaps = 18/780 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M++ KRDGRKEPV FDK+TAR+ KLSYGL +P + QKV G++ G+TT +LD LA
Sbjct: 3 MWIYKRDGRKEPVAFDKVTARINKLSYGLDPNFVEPAEITQKVVQGIHAGITTVELDNLA 62
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+A+SNLHK TK FS + D++ + N ++GK + ++ DDV
Sbjct: 63 AETAAYLTTKHPDYAILAARIAISNLHKETKKVFSAVVHDLHAWVNPKTGKHSPMIDDDV 122
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+++M N LD AIIYDRDF ++YFGFKTLERSYLL+++ ++VERPQHM+MRV+VGIH
Sbjct: 123 YKVVMDNKDILDSAIIYDRDFAYNYFGFKTLERSYLLRINGKIVERPQHMIMRVAVGIHG 182
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+ D ++TY+LMS+ +FTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSI+GIYDTLK CA
Sbjct: 183 SNIDKVIETYNLMSERYFTHASPTLFNAGTPRPQMSSCFLVAMKDDSIDGIYDTLKTCAQ 242
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIRA GSYI GTNG SNGI+PML+ ++ TARYVDQGG KR GAFAIY
Sbjct: 243 ISKTAGGIGLHIHNIRAKGSYIAGTNGYSNGIIPMLRAYDATARYVDQGGNKRPGAFAIY 302
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F+F+DLRKN GKEE RARDLFYALW+ DLFM+RV DG W+L CP++ GLA
Sbjct: 303 LEPWHADVFDFIDLRKNHGKEEVRARDLFYALWISDLFMKRVESDGDWTLMCPAECPGLA 362
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY YE +G+ + I A+KLWF IL +Q ETG PY+ +KD+ N KSNQ++L
Sbjct: 363 DVYGEEFEKLYESYERQGKGRKTIKAQKLWFAILEAQTETGVPYICYKDAANSKSNQKHL 422
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+SSP+E AVCNLAS+ALP +V D + R++
Sbjct: 423 GTIKSSNLCTEIMEYSSPDEVAVCNLASLALPAFV------------------DLERRVY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L E+TK++T+NL+ +I N+YP+ R SN+RHRP+G+G+QGLAD F+ L +PF+S
Sbjct: 465 DFKKLHEITKVVTKNLDTVITRNYYPVPEARNSNMRHRPVGLGVQGLADAFMALRMPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ AL+AS ELA + G YE+Y GSP+SKGILQ DMW P+D WDW
Sbjct: 525 AEARELNIQIFETIYHAALEASCELAEEFGTYESYEGSPISKGILQYDMWGRVPTDLWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+ I++NGVRNSLLVAPMPTASTSQILG NECFEPYTS +Y RRVLSG+F VV L
Sbjct: 585 TELKAKIAQNGVRNSLLVAPMPTASTSQILGWNECFEPYTSMLYARRVLSGDFQVVCPWL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL L LW +K II GS+ I IP++LK IY+TVWEI QK ++D+AADRG +
Sbjct: 645 LRDLINLDLWDDNMKQLIIAAGGSIQSIPNIPDDLKKIYRTVWEISQKAVIDLAADRGAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ P +LTS+HFY W +G+KTG YYLRTR +A+AI+FTVD S L K
Sbjct: 705 IDQSQSLNIHLSNPSFPQLTSMHFYGWKRGLKTGCYYLRTRPSANAIQFTVDASTLKTAK 764
>gi|380020101|ref|XP_003693934.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase large subunit-like [Apis florea]
Length = 822
Score = 1053 bits (2722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/839 (61%), Positives = 631/839 (75%), Gaps = 52/839 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKE V FDKIT+R+ KL Y L ++ DP + +V +G+Y GVTT +LD LA
Sbjct: 7 MYVIKRDGRKEDVHFDKITSRISKLCYNLDMDYIDPSAITFRVISGLYSGVTTVELDNLA 66
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+A+SNLHK T SFSE + ++Y+ + + + ++++
Sbjct: 67 AETAATMTTKHPDYAILAARIAISNLHKETTKSFSEVMYNLYHVKEQYTNNQKPVISEKY 126
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y II KNA L+ AIIYDRDF ++YFGFKTLERSYLLK+ +VVERPQHMLMRV+V IH
Sbjct: 127 YNIIQKNANKLNSAIIYDRDFSYNYFGFKTLERSYLLKIHGKVVERPQHMLMRVAVAIHG 186
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D A++TY+ +S+ +FTHA+PTLF+A T Q Q+SSCFLL M +DSIEGIYDTLK+CA+
Sbjct: 187 EDIDKAIETYNFLSERYFTHASPTLFSACTRQQQMSSCFLLTMSEDSIEGIYDTLKRCAL 246
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++H IRA G+ I GT G SNG++PM++V+N+TARYVDQGG KR GAFAIY
Sbjct: 247 ISKSAGGIGLNVHCIRARGTPIAGTLGVSNGLIPMIRVYNNTARYVDQGGNKRPGAFAIY 306
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDL+KN GKEE RAR+LFYALW+PDLFM+RV D+G W+L CP ++ GLA
Sbjct: 307 LEPWHADIFEFLDLKKNTGKEENRARELFYALWIPDLFMKRVLDNGIWTLMCPHESPGLA 366
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE E R K I AR LW IL SQ+ETGTPYML+KD CNRKSN QN+
Sbjct: 367 DVWGNEFEILYTRYENEKRYKRQIQARDLWTAILISQVETGTPYMLYKDHCNRKSNHQNI 426
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTE+V++SSP+E AVCNLASIA+ +V + N+ F
Sbjct: 427 GTIKSSNLCTEVVQYSSPDEVAVCNLASIAVNMFV------------------NPNNQTF 468
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +VTKI+T NL+KIIDVN+YPI R+SN RHRPIGIGIQGLAD F+L+ PFES
Sbjct: 469 DFQKLLKVTKIVTCNLDKIIDVNYYPIPEARKSNFRHRPIGIGIQGLADAFLLMRYPFES 528
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ+LN IFET+YY AL+AS ELA + G YETY GSP+SKGILQ DMWN+ P++ WDW
Sbjct: 529 EEAQKLNIQIFETLYYGALEASCELAEEKGTYETYEGSPVSKGILQYDMWNVIPTNLWDW 588
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 589 TILKXKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQVVNPHL 648
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLTE LW +K +II NGS+ I IP++LK +YKTVWEI QK ++ MAADRG +
Sbjct: 649 LRDLTERDLWDEDMKNEIIANNGSIQDIERIPDDLKMLYKTVWEIPQKIILKMAADRGAF 708
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN-- 778
IDQSQSLN+HM +P KLTS+HFY W G+KTGMYYLRT+ AA+A++FTVD S L N
Sbjct: 709 IDQSQSLNVHMAKPTTEKLTSMHFYGWKMGLKTGMYYLRTKPAANALQFTVDKSKLRNIT 768
Query: 779 ---------------------------EKANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ N+ D D+ + CS +N + CMACGS
Sbjct: 769 NITSNQSINSENDNNEELNNSSQNGWLQDQNKEDVDI-----VLACSRENGDACMACGS 822
>gi|389585613|dbj|GAB68343.1| ribonucleoside-diphosphate reductase large chain [Plasmodium
cynomolgi strain B]
Length = 837
Score = 1053 bits (2722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/825 (60%), Positives = 630/825 (76%), Gaps = 37/825 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+ R G +E + FD+I R+++LSYGL E DP V Q V G+Y G+ T +LDELA
Sbjct: 31 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 89
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T A M HPD+++LA R+ NLHK T + E + +Y Y + R G+ ASL++ +V
Sbjct: 90 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDIGEVAEALYMYKDVR-GRPASLISKEV 148
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE ++++ L+ I Y RDF++DYFGFKTLERSYLL+++ +++ERPQH+LMRVS+GIH
Sbjct: 149 YEFMIQHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINGKIIERPQHLLMRVSIGIHI 208
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D + AL+TYHLMSQ +FTHATPTLFN+GTP+PQ+SSCFLLCMK DSIEGI++TLK+CA+
Sbjct: 209 GDLEKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLCMKSDSIEGIFETLKQCAL 268
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+++ +IR SYI GTNG SNG+VPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 269 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 328
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+DIFEFLDLRKN GKEE RARDLFYA+WVPDLFM+RV+++ W+L CP++ GL+
Sbjct: 329 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPNECPGLS 388
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+SWG EFE LY++YEEE K + A+ LWF IL SQIETG PYML+KDSCN KSNQ+NL
Sbjct: 389 ESWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPYMLYKDSCNAKSNQKNL 448
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLC EI+E++SP+E AVCNLASIAL ++V D + R F
Sbjct: 449 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DVEKREF 490
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+TKIIT NL++II+ N+YP++ RSN RHRPIGIG+QGLADTF+LL P+ES
Sbjct: 491 NFKKLYEITKIITRNLDQIIERNYYPVQEAERSNKRHRPIGIGVQGLADTFMLLRYPYES 550
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-WD 599
A++LNK IFET+YY AL+ S ELA GPYETY GSP S+GILQ DMWN+ ++ W+
Sbjct: 551 DSAKELNKRIFETMYYAALEMSMELAQIYGPYETYQGSPASQGILQFDMWNVKVDNKYWN 610
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L+ I K+G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 611 WDELKAKIKKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 670
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDL + GLW +K ++I NGSV ISEIP +LK +YKTVWEIKQK ++DMAADRG
Sbjct: 671 LLKDLFDRGLWDEDMKQQLIAHNGSVQYISEIPSDLKELYKTVWEIKQKNIIDMAADRGA 730
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN- 778
+IDQSQSLNI++++P KL+S+HFY W KG+KTG YYLRT+AA DAIKFTVDT V N
Sbjct: 731 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTQVAKNA 790
Query: 779 ------------EKANRADNDVEANLAQ-VVCSLK--NQEECMAC 808
+ +R E+ + Q VVC L+ N ++C+ C
Sbjct: 791 AKMKNAEGVAITREVSRETISTESTVTQNVVCPLRRNNDDQCLMC 835
>gi|149248790|ref|XP_001528782.1| ribonucleoside-diphosphate reductase large chain 1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146448736|gb|EDK43124.1| ribonucleoside-diphosphate reductase large chain 1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 881
Score = 1052 bits (2721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/785 (61%), Positives = 623/785 (79%), Gaps = 16/785 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPVRFDKITAR+++L YGL H +PV + QKV AGVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLDPTHVEPVAITQKVIAGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA+LA R+AVSNLHK T +S K +Y Y N + + +++ +
Sbjct: 61 AETAATMTTIHPDYAVLAARIAVSNLHKQTTKQYSAVSKILYEYINPETKLHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II ++ L+ AI+YDRDF+++YFGFKTLERSYLL+++ +V ERPQH++MRV++GIH
Sbjct: 121 YDIIQEHEDELNSAIVYDRDFNYNYFGFKTLERSYLLRVNGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++TY+LMSQ +FTH +P LFNAGTP+PQ+SSCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 RDIPRVIETYNLMSQRYFTHGSPCLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIR++G+YI GTNG+SNGI+PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIFEF+++RKN GKEE RARDLF ALW+PDLFM+RV +G W+LF P++A GLA
Sbjct: 301 LEPWHSDIFEFIEIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++Y EGR + I A+KLW+ IL Q ETGTP+ML+KD+CN KSNQ+NL
Sbjct: 361 DCYGEEFEELYNKYVAEGRGRQTIKAQKLWYSILECQTETGTPFMLYKDACNAKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+SSPEE AVCNLASIALP ++ + D +
Sbjct: 421 GMIKSSNLCCEIVEYSSPEEVAVCNLASIALPSFIEQ----------------DENKIWY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FE+L +VTK++T NLN++ID N+YP+ +SN+RHRPI +G+QGLAD F++L + F+S
Sbjct: 465 NFEKLHDVTKVVTRNLNRVIDRNYYPVPEAEKSNMRHRPIALGVQGLADAFMVLRIAFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ A++AS ELA ++G YETY GSP S+G+LQ D+WN P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASIELAQEEGAYETYQGSPASQGLLQFDLWNRKPTELWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +VN +L
Sbjct: 585 DELKAKLAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W+ A+K+ II NGS+ + IP+E+KA+YKTVWEI QK ++DMA+DR +
Sbjct: 645 LRDLVDLGIWNDAMKSSIISNNGSIQALPNIPDEIKALYKTVWEISQKHIIDMASDRAAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH++ P GKLTS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D +
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKKIAEQAG 764
Query: 781 ANRAD 785
AD
Sbjct: 765 NTVAD 769
>gi|1710391|sp|P50648.1|RIR1_PLAF4 RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase R1 subunit
gi|497904|gb|AAA50171.1| ribonucleotide reductase large subunit [Plasmodium falciparum]
Length = 806
Score = 1052 bits (2721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/824 (60%), Positives = 630/824 (76%), Gaps = 36/824 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+ R G +E + FD+I R+++LSYGL E DP V Q V G+Y G+ T +LDELA
Sbjct: 1 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T A M HPD+++LA R+ NLHK T + +E + +Y Y + R G+ ASL++ +V
Sbjct: 60 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDVAEVAEALYTYKDVR-GRPASLISKEV 118
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ I+ + L+ I Y RDF++DYFGFKTLERSYLL+++++++ERPQH+LMRVS+GIH
Sbjct: 119 YDFILLHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHI 178
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD D AL+TYHLMSQ +FTHATPTLFN+GTP+PQ+SSCFLL MK DSIEGI++TLK+CA+
Sbjct: 179 DDIDKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKADSIEGIFETLKQCAL 238
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+++ +IR SYI GTNG SNG+VPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 239 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 298
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+DIFEFLDLRKN GKEE RARDLFYA+WVPDLFM+RV+++ W+L CP++ GL+
Sbjct: 299 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPNECPGLS 358
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
++WG EFE LY++YEEE K + A+ LWF IL SQIETG PYML+KDSCN KSNQ+NL
Sbjct: 359 ETWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPYMLYKDSCNAKSNQKNL 418
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLC EI+E++SP+E AVCNLASIAL ++V D + + F
Sbjct: 419 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DLEKKEF 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+TKIIT NL+KII+ N+YP++ + SN RHRPIGIG+QGLADTF+LL P+ES
Sbjct: 461 NFKKLYEITKIITRNLDKIIERNYYPVKEAKTSNTRHRPIGIGVQGLADTFMLLRYPYES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-WD 599
A++LNK IFET+YY AL+ S ELA GPYE+Y GSP S+GILQ DMWN ++ WD
Sbjct: 521 DAAKELNKRIFETMYYAALEMSVELASIHGPYESYQGSPASQGILQFDMWNAKVDNKYWD 580
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L+ I K+G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 581 WDELKAKIRKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 640
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDL + GLW +K ++I NGS+ ISEIP++LK +YKTVWEIKQK ++DMAADRG
Sbjct: 641 LLKDLFDRGLWDEDMKQQLIAHNGSIQYISEIPDDLKELYKTVWEIKQKNIIDMAADRGI 700
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN- 778
+IDQSQSLNI++++P KL+S+HFY W KG+KTG YYLRT+AA DAIKFTVDT V N
Sbjct: 701 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTHVAKNA 760
Query: 779 ------------EKANRADNDVEANLAQVVCSLK--NQEECMAC 808
+ +R E+ + Q VC L+ N E+C+ C
Sbjct: 761 VKLKNADGVQITREVSRETISTESTVTQNVCPLRRNNDEQCLMC 804
>gi|68070011|ref|XP_676917.1| ribonucleoside-diphosphate reductase, large subunit, [Plasmodium
berghei strain ANKA]
gi|56496825|emb|CAH95342.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Plasmodium berghei]
Length = 847
Score = 1052 bits (2721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/824 (60%), Positives = 630/824 (76%), Gaps = 36/824 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+ R G +E V FD+I R+++LSYGL E DP V Q V G+Y G+ T +LDELA
Sbjct: 42 MYVLNRKGEEEDVSFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 100
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T A M HPD+++LA R+ NLHK T + + + +Y Y + R G+ ASL++ +V
Sbjct: 101 AQTCAYMATTHPDFSILAARITTDNLHKSTNDDIGKVAEALYTYKDIR-GRSASLISKEV 159
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ IM++ L+ I Y RDF++DYFGFKTLERSYLL+++++++ERPQH+LMRVS+GIH
Sbjct: 160 YDFIMEHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHI 219
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + AL+TYHLMSQ +FTHATPTLFN+GTP+PQ+SSCFLL MK DSIEGI++TLK+CA+
Sbjct: 220 DDLEKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKSDSIEGIFETLKQCAL 279
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+++ +IR SYI GTNG SNG+VPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 280 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 339
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+DIFEFLDLRKN GKEE RARDLFYA+WVPDLFM+RV+++ W+L CP++ GL+
Sbjct: 340 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAIWVPDLFMKRVKENKNWTLMCPNECPGLS 399
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+SWG EFE LY++YEEE K + A+ LWF IL SQIETG PYML+KD+CN KSNQ+NL
Sbjct: 400 ESWGDEFEKLYTKYEEENLGKKTVLAQDLWFAILQSQIETGVPYMLYKDACNSKSNQKNL 459
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLC EI+E++SP+E AVCNLASIAL ++V D + + F
Sbjct: 460 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DREKKEF 501
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L ++TKIIT NL+KII+ N+YPI+ +SN RHRPIGIG+QGLADTF+LL P+ES
Sbjct: 502 NFKKLYDITKIITRNLDKIIERNYYPIKEAEKSNKRHRPIGIGVQGLADTFMLLRYPYES 561
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-WD 599
EA++LNK IFET+YY AL+ S ELA GPYE+Y GSP S+GILQ DMWN ++ WD
Sbjct: 562 DEAKELNKRIFETMYYAALEMSVELAQVHGPYESYKGSPASQGILQFDMWNAKVDNKYWD 621
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L++ IS +G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 622 WDLLKKKISIHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 681
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDL + GLW +K ++I NGSV ISEIP +LK +YKTVWEIKQK ++DMAADRG
Sbjct: 682 LLKDLFDRGLWDEDMKQQLIAHNGSVQYISEIPNDLKELYKTVWEIKQKNIIDMAADRGV 741
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN- 778
+IDQSQSLNI++++P KL+S+HFY W KG+KTG YYLRT+AA DAIKFTVDT V N
Sbjct: 742 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTQVAKNA 801
Query: 779 EKANRADN------------DVEANLAQVVCSLK--NQEECMAC 808
EK A+ E+ + Q C L+ N E C+ C
Sbjct: 802 EKLKNAEGATITREVSRETISTESTVTQNACPLRRNNDEPCLMC 845
>gi|321259241|ref|XP_003194341.1| ribonucleoside-diphosphate reductase large chain [Cryptococcus
gattii WM276]
gi|317460812|gb|ADV22554.1| ribonucleoside-diphosphate reductase large chain, putative
[Cryptococcus gattii WM276]
Length = 863
Score = 1051 bits (2719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/780 (61%), Positives = 609/780 (78%), Gaps = 18/780 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M++ KRDGRKEPV FDK+TAR+ KLSYGL +P + QKV G++ G+TT +LD LA
Sbjct: 3 MWIYKRDGRKEPVAFDKVTARINKLSYGLDPNFVEPAEITQKVVQGIHAGITTVELDNLA 62
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+A+SNLHK TK FS + D++ + N ++GK + ++ D+V
Sbjct: 63 AETAAYLTTKHPDYAILAARIAISNLHKETKKVFSAVVHDLHAWVNPKTGKHSPMIDDEV 122
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+++M N LD AIIYDRDF ++YFGFKTLERSYLL+++ ++VERPQHM+MRV+VGIH
Sbjct: 123 YKVVMDNKDILDSAIIYDRDFAYNYFGFKTLERSYLLRINGKIVERPQHMIMRVAVGIHG 182
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+ D ++TY+LMS+ +FTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSI+GIYDTLK CA
Sbjct: 183 ANIDKVIETYNLMSERYFTHASPTLFNAGTPRPQMSSCFLVAMKDDSIDGIYDTLKTCAQ 242
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIRA GSYI GTNG SNGI+PML+ ++ TARYVDQGG KR GAFAIY
Sbjct: 243 ISKTAGGIGLHIHNIRAKGSYIAGTNGYSNGIIPMLRAYDATARYVDQGGNKRPGAFAIY 302
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+F+F+DLRKN GKEE RARDLFYALW+PDLFM+RV DG W+L CP++ GLA
Sbjct: 303 LEPWHADVFDFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVESDGDWTLMCPAECPGLA 362
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY YE +G+ + I A+KLWF IL +Q ETG PY+ +KD+ N KSNQ++L
Sbjct: 363 DVYGEEFEKLYESYERQGKGRKTIKAQKLWFAILEAQTETGVPYICYKDAANSKSNQKHL 422
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+SSP+E AVCNLAS+ALP +V D + R++
Sbjct: 423 GTIKSSNLCTEIMEYSSPDEVAVCNLASLALPAFV------------------DLERRVY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L E+TK++T+NL+ +I N+YP+ R SN+RHRP+G+G+QGLAD F+ L +PF+S
Sbjct: 465 DFKKLHEITKVVTKNLDTVITRNYYPVPEARNSNMRHRPVGLGVQGLADAFMALRMPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFETIY+ AL+AS ELA + G YE+Y GSP+SKGILQ DMW P+D WDW
Sbjct: 525 LEARELNIQIFETIYHAALEASCELAEEQGTYESYEGSPLSKGILQYDMWGRVPTDLWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+ I+++GVRNSLLVAPMPTASTSQILG NECFEPYTS +Y RRVLSG+F VV L
Sbjct: 585 TELKAKIAQHGVRNSLLVAPMPTASTSQILGWNECFEPYTSMLYARRVLSGDFQVVCPWL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL L LW +K II GS+ I IP++LK IY+TVWEI QK ++D+AADRG +
Sbjct: 645 LRDLINLDLWDDNMKQLIIAAGGSIQSIPNIPDDLKKIYRTVWEISQKAVIDLAADRGAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ P +LTS+HFY W +G+KTG YYLRTR +A+AI+FT+D S L K
Sbjct: 705 IDQSQSLNIHLSNPSFPQLTSMHFYGWKRGLKTGCYYLRTRPSANAIQFTIDASTLKTAK 764
>gi|124809244|ref|XP_001348526.1| ribonucleoside-diphosphate reductase, large subunit [Plasmodium
falciparum 3D7]
gi|23497421|gb|AAN36965.1|AE014821_52 ribonucleoside-diphosphate reductase, large subunit [Plasmodium
falciparum 3D7]
Length = 847
Score = 1051 bits (2719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/824 (60%), Positives = 630/824 (76%), Gaps = 36/824 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+ R G +E + FD+I R+++LSYGL E DP V Q V G+Y G+ T +LDELA
Sbjct: 42 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 100
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T A M HPD+++LA R+ NLHK T + +E + +Y Y + R G+ ASL++ +V
Sbjct: 101 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDVAEVAEALYTYKDVR-GRPASLISKEV 159
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ I+ + L+ I Y RDF++DYFGFKTLERSYLL+++++++ERPQH+LMRVS+GIH
Sbjct: 160 YDFILLHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHI 219
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD D AL+TYHLMSQ +FTHATPTLFN+GTP+PQ+SSCFLL MK DSIEGI++TLK+CA+
Sbjct: 220 DDIDKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKADSIEGIFETLKQCAL 279
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+++ +IR SYI GTNG SNG+VPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 280 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 339
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+DIFEFLDLRKN GKEE RARDLFYA+WVPDLFM+RV+++ W+L CP++ GL+
Sbjct: 340 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPNECPGLS 399
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
++WG EFE LY++YEEE K + A+ LWF IL SQIETG PYML+KDSCN KSNQ+NL
Sbjct: 400 ETWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPYMLYKDSCNAKSNQKNL 459
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLC EI+E++SP+E AVCNLASIAL ++V D + + F
Sbjct: 460 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DLEKKEF 501
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+TKIIT NL+KII+ N+YP++ + SN RHRPIGIG+QGLADTF+LL P+ES
Sbjct: 502 NFKKLYEITKIITRNLDKIIERNYYPVKEAKTSNTRHRPIGIGVQGLADTFMLLRYPYES 561
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-WD 599
A++LNK IFET+YY AL+ S ELA GPYE+Y GSP S+GILQ DMWN ++ WD
Sbjct: 562 DAAKELNKRIFETMYYAALEMSVELASIHGPYESYQGSPASQGILQFDMWNAKVDNKYWD 621
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L+ I K+G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 622 WDELKAKIRKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 681
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDL + GLW +K ++I NGS+ ISEIP++LK +YKTVWEIKQK ++DMAADRG
Sbjct: 682 LLKDLFDRGLWDEDMKQQLIAHNGSIQYISEIPDDLKELYKTVWEIKQKNIIDMAADRGI 741
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN- 778
+IDQSQSLNI++++P KL+S+HFY W KG+KTG YYLRT+AA DAIKFTVDT V N
Sbjct: 742 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTHVAKNA 801
Query: 779 ------------EKANRADNDVEANLAQVVCSLK--NQEECMAC 808
+ +R E+ + Q VC L+ N E+C+ C
Sbjct: 802 VKLKNADGVQITREVSRETISTESTVTQNVCPLRRNNDEQCLMC 845
>gi|294941788|ref|XP_002783240.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239895655|gb|EER15036.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
Length = 792
Score = 1050 bits (2716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/817 (62%), Positives = 636/817 (77%), Gaps = 38/817 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKR+G+K V+FDKIT R++ L+ GL++++ D + QKV G+Y GVTTT+LD LA
Sbjct: 3 MYVIKRNGQKADVQFDKITKRIRPLTRGLNEDYVDVTQITQKVAEGIYPGVTTTELDSLA 62
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A M+ HPD++ LA R+AVSNLHK T SFSET+ ++YN + R G+ + LV+++V
Sbjct: 63 AETCAYMSQVHPDFSTLAARIAVSNLHKNTHESFSETVTELYNITDSR-GRSSPLVSEEV 121
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM--DSRVVERPQHMLMRVSVGI 178
Y +++ NA LD AI YDRDFD+DYFGFKTLERSYLLK D +ERPQHM+MRV+VGI
Sbjct: 122 YNLVLMNADKLDKAIDYDRDFDYDYFGFKTLERSYLLKRPSDKTCIERPQHMIMRVAVGI 181
Query: 179 HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
H DD D+A++TY LMS FTHATPTLFN+GTP PQ+SSCFLL +K+DSIEGIYDTLK+C
Sbjct: 182 HGDDVDAAIETYALMSTRVFTHATPTLFNSGTPHPQMSSCFLLSIKEDSIEGIYDTLKQC 241
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIG++I IRA+ SYI GTNG SNGIVPML+VFNDTARYVDQGGGKRKG+FA
Sbjct: 242 AMISKTAGGIGVAITGIRATESYIRGTNGFSNGIVPMLRVFNDTARYVDQGGGKRKGSFA 301
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
+YLEPWHAD+FEFLDL+KN GKEE RARDLFYALW+PDLFM+RV +G W+LFCP++A G
Sbjct: 302 VYLEPWHADVFEFLDLKKNHGKEEHRARDLFYALWIPDLFMKRVMANGDWTLFCPNEAPG 361
Query: 359 LADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQ 418
L D++G EFE LY +YE++G + + A+ LWF+IL SQ ETG PYML+KDS NRKSNQ+
Sbjct: 362 LQDTYGDEFEALYEKYEKDGIGRKTVKAQSLWFKILESQQETGIPYMLYKDSANRKSNQK 421
Query: 419 NLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNR 478
NLGTI+ SNLC EI+E++SP+E AVCNLASIAL +V D K R
Sbjct: 422 NLGTIRCSNLCCEIIEYTSPDEVAVCNLASIALNMFV------------------DKKTR 463
Query: 479 LFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
+DF RL V K++T+NLNK+ID N+YP+ R+SN+RHRPIGIG+QGLAD F+L+ P+
Sbjct: 464 TYDFGRLHRVAKVVTKNLNKVIDRNYYPVPEARKSNMRHRPIGIGVQGLADAFLLMRFPY 523
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDR 597
ESPEA +LN DIFETIY+ A +AS ELA +DGPYET+ GSP S+GILQ DMW++TP S R
Sbjct: 524 ESPEALKLNNDIFETIYHAACEASMELAKRDGPYETFQGSPASEGILQFDMWDVTPDSGR 583
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+SL+E + KNG+RNSLL+APMPTAST+QILGNNE FEPYT NIY RRVL+GEF+ VN
Sbjct: 584 WDWASLKEEVKKNGMRNSLLIAPMPTASTAQILGNNEAFEPYTQNIYVRRVLAGEFVQVN 643
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
+HL+ DL ELGLW+ +K KII + GSV + EIP E++A+Y+TVWEIKQK ++DMAA R
Sbjct: 644 RHLVDDLMELGLWNDEIKDKIIRKKGSVQGVEEIPMEIQALYRTVWEIKQKKILDMAAGR 703
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G YIDQSQSLNIHM + KL+S+HFY W G+KTG YYLRT+AAADAI+FT+D +
Sbjct: 704 GPYIDQSQSLNIHMTNCTNAKLSSMHFYGWKLGLKTGQYYLRTKAAADAIQFTLDAKKVT 763
Query: 778 NEKANRADNDVEANLAQVVCSLKNQ------EECMAC 808
VE+ L LK Q E C+AC
Sbjct: 764 ----------VESPLKPRSSPLKPQYVQEDEETCIAC 790
>gi|392575022|gb|EIW68156.1| hypothetical protein TREMEDRAFT_39705 [Tremella mesenterica DSM
1558]
Length = 856
Score = 1048 bits (2711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/781 (62%), Positives = 609/781 (77%), Gaps = 18/781 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M++ KRDGRKE V FDK+TAR+ KLSYGL +P + QKV G++ G+TT +LD LA
Sbjct: 3 MWIYKRDGRKEHVAFDKVTARINKLSYGLDPNFIEPAEITQKVIQGIHTGITTVELDNLA 62
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+A+SNLHK TK SFS + D+Y++ N ++GK A ++AD+V
Sbjct: 63 AETAAYLTTKHPDYAILAARIAISNLHKETKKSFSAVVHDLYSWVNPKTGKHAPMIADEV 122
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y++IM N LD AIIYDRDF ++YFGFKTLERSYLL+++ ++VERPQHM+MRV+VGIH
Sbjct: 123 YKVIMDNKDTLDAAIIYDRDFAYNYFGFKTLERSYLLRVNGKIVERPQHMIMRVAVGIHG 182
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ D L+TY+LMS+ +FTHA+PTLFNAGTP Q+SSCFL+ M+DDSIEGIYDTLK CA
Sbjct: 183 DNIDKVLETYNLMSERYFTHASPTLFNAGTPHAQMSSCFLVAMRDDSIEGIYDTLKTCAQ 242
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIRA GSYI GTNG SNGIVPML+ F+ TARYVDQGG KR GAFAIY
Sbjct: 243 ISKTAGGIGLHIHNIRAKGSYIAGTNGYSNGIVPMLRAFDATARYVDQGGNKRPGAFAIY 302
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FLDLRKN GKEE RARDLFYALW+ DLFM+RV DG W+L CP++ GLA
Sbjct: 303 LEPWHADIFDFLDLRKNHGKEEVRARDLFYALWISDLFMKRVESDGDWTLMCPAECPGLA 362
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D FE LY +YE EG+ + I A+KLWF IL +Q ETG P+ML+KD+ N KSNQQ+L
Sbjct: 363 DVHSEAFEELYERYEREGKGRKTIKAQKLWFAILEAQTETGGPFMLYKDAANAKSNQQHL 422
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E+S+P+E AVCNLAS+ALP +V D + R++
Sbjct: 423 GTIKSSNLCTEIIEYSAPDEVAVCNLASLALPAFV------------------DMERRVY 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L E+TK++T+NL+ +I N+YP+ RSN+RHRP+G+G+QGLAD F+ L +PF+S
Sbjct: 465 DFKKLHEITKVVTKNLDTVISRNYYPVPEAHRSNMRHRPVGLGVQGLADAFMALRMPFDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
P A++LN IFETIY+ AL++S E+A + G YETY GSP+S+G LQ D+W P+D WDW
Sbjct: 525 PAARELNIQIFETIYHAALESSCEMAQERGKYETYEGSPISQGKLQFDLWGRVPTDLWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ LR I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTS +Y RRVLSG+F VV L
Sbjct: 585 TELRANIAKHGVRNSLLVAPMPTASTSQILGWNECFEPYTSMLYARRVLSGDFQVVCPWL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL LGLW +K II GS+ I IP ELKAIYKTVWEI QK ++D+AADRG Y
Sbjct: 645 LRDLINLGLWDDHMKNLIIAAGGSIQNIPSIPAELKAIYKTVWEISQKAVIDLAADRGAY 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ P +LTS+HFY W +G+KTG+YYLRT+ +A AI+FT+D S L K
Sbjct: 705 IDQSQSLNIHLANPSFSQLTSMHFYGWKRGLKTGLYYLRTKPSAQAIQFTIDASTLKQAK 764
Query: 781 A 781
A
Sbjct: 765 A 765
>gi|323452424|gb|EGB08298.1| hypothetical protein AURANDRAFT_37557 [Aureococcus anophagefferens]
Length = 793
Score = 1048 bits (2709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/810 (59%), Positives = 630/810 (77%), Gaps = 23/810 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+KR+G+KE VR+DKIT+R++KL YGL ++ P + QKV GVY GVTT +LDELA
Sbjct: 7 MQVVKRNGKKETVRYDKITSRIQKLCYGLDAKYIKPNQITQKVIQGVYDGVTTHELDELA 66
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T A M HPD+++LA R++VSNLHK T N+FS+ ++ ++ + + ++ K A+L++D+
Sbjct: 67 AQTTAYMATQHPDFSVLAARISVSNLHKSTDNTFSDVVEKLHKHMHPKTKKPAALISDET 126
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y + K+ ++ AI+Y+RDF++DYFGFKTLERSYL+++D + ERPQHM+MRV++GIH
Sbjct: 127 YATVQKHKDAINAAIVYERDFEYDYFGFKTLERSYLMRLDGAIAERPQHMIMRVALGIHG 186
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +AL+TY +MSQ FTHATPTLFNAGTP+PQLSSCFLL MK+DSIEGIYDTLK+CA
Sbjct: 187 DDLAAALETYEMMSQKMFTHATPTLFNAGTPRPQLSSCFLLAMKEDSIEGIYDTLKRCAA 246
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLS+HNIRA+ SYI G+NG+SNGIVPML+V+NDTARYVDQGGG+RKG+FAIY
Sbjct: 247 ISKYAGGIGLSVHNIRATDSYICGSNGTSNGIVPMLRVYNDTARYVDQGGGRRKGSFAIY 306
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI +LDL+KN G E RARDLFY LW+PDLFM+RV +G WSL CP++ GLA
Sbjct: 307 LEPWHADIETWLDLKKNHGNELERARDLFYGLWIPDLFMKRVEANGFWSLMCPNECPGLA 366
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D G EFE LY +YE EGRA+ I A++LWF IL+SQ+ETGTPYML+KD+CN KSNQ++L
Sbjct: 367 DCHGAEFEALYERYEAEGRARKAIPAQQLWFAILDSQVETGTPYMLYKDACNDKSNQKHL 426
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIVE+++ +E AVC LASI L +V G+ D+ F
Sbjct: 427 GTIKSSNLCTEIVEYTASDEIAVCTLASINLTVHVD--------------GAGDAAT--F 470
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L ++T+NLNK++DVN+YP+E + SNL+HRP+GIG+QG+AD L P+ES
Sbjct: 471 DFAKLKRTAYVVTKNLNKVVDVNYYPVEEAKSSNLKHRPVGIGVQGMADALAKLRHPYES 530
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+A+++N+D+FETIY+ A++AS +LA + GPY++Y GSP S+G+ Q D+WN+ PSDRWDW
Sbjct: 531 DDAKRINRDVFETIYFGAMEASIDLAQELGPYDSYAGSPTSQGLFQFDLWNVKPSDRWDW 590
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LR + ++G RNSLL+APMPTAST+QILGNNE FEP+TSN+YTRRVL+GEF VVNK+L
Sbjct: 591 EGLRARLGEHGCRNSLLLAPMPTASTAQILGNNESFEPFTSNMYTRRVLAGEFAVVNKYL 650
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL LGLW+ ++ +II + GSV + IP++LKA+YKT WEIKQK ++DM+ADRG +
Sbjct: 651 LRDLIALGLWTSEIRNQIIADKGSVQGVLAIPDDLKALYKTTWEIKQKCVLDMSADRGAF 710
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
I QSQSLN+H+ P+ GKLTS+HFYAW KG+KTGMYYLRTR ADAI FTVD ++ +
Sbjct: 711 ICQSQSLNLHVADPNPGKLTSMHFYAWKKGLKTGMYYLRTRPKADAIAFTVDQAMAAKSR 770
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
A A+ + EC++CG+
Sbjct: 771 GGAALELANGQEAE-------EHECLSCGA 793
>gi|291244082|ref|XP_002741928.1| PREDICTED: ribonucleoside-diphosphate reductase M1 chain-like,
partial [Saccoglossus kowalevskii]
Length = 759
Score = 1047 bits (2708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/776 (63%), Positives = 614/776 (79%), Gaps = 23/776 (2%)
Query: 39 VAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETI 98
+ +V GVY GVTT +LD LAAETAA+MT HPDYA+LA R+AVSNLHK TK +FS +
Sbjct: 3 ITMRVITGVYPGVTTVELDTLAAETAASMTTKHPDYAVLAARIAVSNLHKETKKTFSAVM 62
Query: 99 KDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK 158
D++NY N R+ K + +++ +++II NA L+ AIIYDRDF++++FGFKTLERSYLLK
Sbjct: 63 DDLFNYVNPRNNKPSPMISTKIHDIITNNAERLNSAIIYDRDFNYNFFGFKTLERSYLLK 122
Query: 159 MDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSC 218
++ +V ERPQHMLMRVSVGIH +D + A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSC
Sbjct: 123 INGKVAERPQHMLMRVSVGIHHNDIEGAIETYNLLSEKWFTHASPTLFNAGTCRPQLSSC 182
Query: 219 FLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQV 278
FLL MKDDSIEGIYDTLK+CA+ISKSAGGIG+++H IRASGSYI GTNGSSNG++PML+V
Sbjct: 183 FLLTMKDDSIEGIYDTLKQCALISKSAGGIGVNVHCIRASGSYIAGTNGSSNGLLPMLRV 242
Query: 279 FNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLF 338
+N+TARYVDQGG KR GAFAIYLEPWHADIF+FLD +KN GKEE RARDLFYALW+PDLF
Sbjct: 243 YNNTARYVDQGGNKRPGAFAIYLEPWHADIFDFLDAKKNTGKEEQRARDLFYALWIPDLF 302
Query: 339 MERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQI 398
M+RV + W+L CP++ GL D WG EFE LY +YE E + I A+ LW+ I+ +Q
Sbjct: 303 MKRVETNQDWTLMCPNECPGLHDVWGKEFEDLYEKYERENKGTKTIKAQLLWYAIIEAQT 362
Query: 399 ETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREK 458
ETGTPYML+KD+CNRKSN QNLGTIK SNLCTEIVEFSSP+E AVCNLASIA+ +V+
Sbjct: 363 ETGTPYMLYKDACNRKSNHQNLGTIKCSNLCTEIVEFSSPDEVAVCNLASIAVNMFVK-- 420
Query: 459 GVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHR 518
++ +DF++L +VT +I NLNKIIDVN YP+E R SN+RHR
Sbjct: 421 -----------------PDKTYDFKKLEQVTGVIVRNLNKIIDVNFYPVEEARNSNMRHR 463
Query: 519 PIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYF-- 576
PIGIG+QGLAD FIL+ PF+S EA LNK IFETIYY ALKAS ELA +DG YE+Y
Sbjct: 464 PIGIGVQGLADAFILMRFPFDSDEAMLLNKQIFETIYYGALKASCELAERDGAYESYKFG 523
Query: 577 -GSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
G P+SKGILQ DMW++TP+D DW +L++ I+ +G+RNSLL+APMPTAST+QILGNNE
Sbjct: 524 DGCPVSKGILQYDMWDVTPTDLHDWDALKKDIATHGLRNSLLLAPMPTASTAQILGNNES 583
Query: 636 FEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEEL 695
EPYT+NIY+RRVLSGEF VVN HLLKDLTE+GLW+ +K +I NGS+ I IP+ +
Sbjct: 584 VEPYTTNIYSRRVLSGEFQVVNHHLLKDLTEMGLWNDDMKNLLIANNGSIQSIDGIPDHI 643
Query: 696 KAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
K +Y+TVWEI QK ++ MAADRG +IDQSQSLNIH+ +P++GKLTS+HF+AW +G+KTGM
Sbjct: 644 KKLYRTVWEISQKNILIMAADRGAFIDQSQSLNIHIAEPNYGKLTSMHFFAWKQGLKTGM 703
Query: 756 YYLRTRAAADAIKFTVD-TSVLNNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
YYLRTR AAD IKFTV+ TS+ A E N A +VCSL+N+++C+ CGS
Sbjct: 704 YYLRTRPAADPIKFTVNKTSLKPTTNVEAAAEKEEENQAAMVCSLQNKDDCLMCGS 759
>gi|256072094|ref|XP_002572372.1| ribonucleoside-diphosphate reductase alpha subunit [Schistosoma
mansoni]
gi|353231859|emb|CCD79214.1| putative ribonucleoside-diphosphate reductase, alpha subunit
[Schistosoma mansoni]
Length = 837
Score = 1047 bits (2707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/837 (59%), Positives = 629/837 (75%), Gaps = 47/837 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV+KRDGR E + +KIT R++ + YGL++ + D V ++V +G+Y GVTT +LD LA
Sbjct: 17 IYVVKRDGRNEAIHCEKITKRIRAMCYGLNESYIDVEAVTKRVVSGLYPGVTTVELDNLA 76
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A+M H +YA+LA R+AVSNLHK TK+ FS+ ++D+Y Y N R+ K + LV+ +
Sbjct: 77 AETCASMITKHHEYAILAARLAVSNLHKETKSRFSDVVEDLYCYINPRTKKHSPLVSKSL 136
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ + +NA L+ AI Y RD+ ++YFGFKTLERSYLLK++ +V ERPQHMLMRVS+GIH
Sbjct: 137 RDFVRENAGRLNDAIDYQRDYTYNYFGFKTLERSYLLKINGKVHERPQHMLMRVSIGIHT 196
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+LMS+ WFTHA+PTLFNAGTP+PQLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 197 SDIDSAIETYNLMSEKWFTHASPTLFNAGTPKPQLSSCFLITMKDDSIEGIYDTLKECAV 256
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++HNIR+ G+YI GTNG SNGIVPML+VFN TARYVDQGG KR GAFA+Y
Sbjct: 257 ISKNAGGIGLNVHNIRSLGTYIAGTNGESNGIVPMLRVFNSTARYVDQGGNKRPGAFAMY 316
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+F+F+++RKN G EE RARDLF+ALW+PDLFM RV + KW+L P + GL
Sbjct: 317 LEPWHPDVFQFIEMRKNTGAEEIRARDLFFALWIPDLFMRRVESNDKWTLMDPHECPGLP 376
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG +F+ LY +YE EGR + + A++LW+ I+ QIETG P+ML+KDSCNRKSN Q+L
Sbjct: 377 EVWGEDFDTLYEKYEREGRGRQTVKAQELWYAIIECQIETGNPFMLYKDSCNRKSNHQHL 436
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLCTEIVE+SSP+ETAVCNLASI+L ++V +RD N F
Sbjct: 437 GTIRCSNLCTEIVEYSSPDETAVCNLASISLGKFV----------------NRD--NLTF 478
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVTK++T NLNK+IDV YP+E RRSN+RHRPIGIG+QGLAD F LL PF+S
Sbjct: 479 DFAKLQEVTKVVTRNLNKVIDVTFYPVEEARRSNMRHRPIGIGVQGLADAFCLLRYPFDS 538
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR--- 597
PEA LNK IFET+Y+ +L AS +LAV G YE+Y GSP+SKGILQ DMW + +
Sbjct: 539 PEAADLNKRIFETMYFASLDASCQLAVDQGTYESYQGSPVSKGILQPDMWGVDTEELSKV 598
Query: 598 --WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
DWS LR I+K G+RNSLL+APMPTASTSQILGNNE EP+TSN+++RRVLSGEF +
Sbjct: 599 SGLDWSGLRARINKYGLRNSLLLAPMPTASTSQILGNNESTEPFTSNVFSRRVLSGEFQI 658
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VN +LL DLT+L LWS LKT I+ GS+ I IP+ELK +YKTVWEI QK ++DMAA
Sbjct: 659 VNPYLLDDLTKLELWSEELKTAIVLNQGSIQHIDGIPKELKPLYKTVWEISQKKIIDMAA 718
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
R +IDQSQSLN+H+ QP++GK+TS+HFYAW KG+KTGMYYLRTR AAD IKF+VD ++
Sbjct: 719 GRAPFIDQSQSLNLHLAQPNYGKITSMHFYAWRKGLKTGMYYLRTRPAADPIKFSVDKTI 778
Query: 776 L-----NNEKANRADND-------------------VEANLAQVVCSLKNQEECMAC 808
L + K N N+ + NL + CSL N E C++C
Sbjct: 779 LRVLTDSTTKTNEPQNNDSIDQTVEAIEELRIIEEIQKRNLDSIACSLNNPEGCLSC 835
>gi|323454028|gb|EGB09899.1| hypothetical protein AURANDRAFT_24558 [Aureococcus anophagefferens]
Length = 787
Score = 1044 bits (2700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/810 (59%), Positives = 630/810 (77%), Gaps = 23/810 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+KR+G+KE VR+DKIT+R++KL YGL ++ P + QKV GVY GVTT +LDELA
Sbjct: 1 MQVVKRNGKKETVRYDKITSRIQKLCYGLDAKYIKPNQITQKVIQGVYDGVTTHELDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T A M HPD+++LA R++VSNLHK T N+FS+ ++ ++ + + ++ K A+L++D+
Sbjct: 61 AQTTAYMATQHPDFSVLAARISVSNLHKSTDNTFSDVVEKLHKHMHPKTKKPAALISDET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y + K+ ++ AI+YDRDF++DYFGFKTLERSYL+++D + ERPQHM+MRV++GIH
Sbjct: 121 YATVQKHKDAINAAIVYDRDFEYDYFGFKTLERSYLMRLDGAIAERPQHMIMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD A +TY +MSQ FTHATPTLFNAGTP+PQLSSCFLL MK+DSIEGIYDTLK+CA
Sbjct: 181 DDLAGAFETYEMMSQKMFTHATPTLFNAGTPRPQLSSCFLLAMKEDSIEGIYDTLKRCAA 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLS+HNIRA+ SYI G+NG+SNGIVPML+V+NDTARYVDQGGG+RKG+FAIY
Sbjct: 241 ISKYAGGIGLSVHNIRATDSYICGSNGTSNGIVPMLRVYNDTARYVDQGGGRRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI +LDL+KN G E RARDLFY LW+PDLFM+RV +G WSL CP++ GLA
Sbjct: 301 LEPWHADIETWLDLKKNHGNELERARDLFYGLWIPDLFMKRVEANGFWSLMCPNECPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D G EFE LY +YE EGRA+ I A++LWF IL+SQ+ETGTPYML+KD+CN KSNQ++L
Sbjct: 361 DCHGAEFEALYERYEAEGRARKAIPAQQLWFAILDSQVETGTPYMLYKDACNDKSNQKHL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIVE+++ +E AVC LASI L +V G+ D+ F
Sbjct: 421 GTIKSSNLCTEIVEYTASDEIAVCTLASINLTVHVD--------------GAGDAAT--F 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L ++T+NLNK++DVN+YP+E + SNL+HRP+GIG+QG+AD L P+ES
Sbjct: 465 DFAKLRRTAYVVTKNLNKVVDVNYYPVEEAKSSNLKHRPVGIGVQGMADALAKLRHPYES 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+A+++N+D+FETIY+ A++AS +LA + GPY++Y GSP S+G+ Q D+WN+ PSDRWDW
Sbjct: 525 DDAKRINRDVFETIYFGAMEASIDLAQELGPYDSYAGSPTSQGLFQFDLWNVKPSDRWDW 584
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
LR + ++G RNSLL+APMPTAST+QILGNNE FEP+TSN++TRRVL+GEF VVNK+L
Sbjct: 585 EGLRARLGEHGCRNSLLLAPMPTASTAQILGNNESFEPFTSNMFTRRVLAGEFAVVNKYL 644
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL LGLW+ ++ +II + GSV + IP++LKA+YKT WEIKQK ++DM+ADRG +
Sbjct: 645 LRDLIALGLWTSEIRNQIIADKGSVQGVLAIPDDLKALYKTTWEIKQKCVLDMSADRGAF 704
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
I QSQSLN+H+ P+ GKLTS+HFYAW KG+KTGMYYLRTR ADAI FTVD ++ +
Sbjct: 705 ICQSQSLNLHVADPNPGKLTSMHFYAWKKGLKTGMYYLRTRPKADAIAFTVDQAMAAKSR 764
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
A +E Q + + EC++CG+
Sbjct: 765 GGAA---LEPANGQEL----EEHECLSCGA 787
>gi|47225021|emb|CAF97436.1| unnamed protein product [Tetraodon nigroviridis]
Length = 846
Score = 1044 bits (2700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/793 (61%), Positives = 615/793 (77%), Gaps = 22/793 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVVKRDGRQERVMFDKITSRIQKLCYGLNADFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE +A +T HPDYA+LA R+AVSNLHK TK FSE ++D+YNY N + + +V+ +
Sbjct: 61 AEISATLTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNRCHSPMVSKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+++N L+ AIIYDRDF +++FGFKTLERSYLLK++ +V ERPQHMLMRVSVGIH+
Sbjct: 121 LDIVLQNRDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 NDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGHSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+F+FL+L+KN GKEE RARDLFYALW+PDLFM+RV + WSL CP + GL
Sbjct: 301 LEPWHFDVFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVESNQDWSLMCPDECPGLN 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE+EGR K V+ A+++W I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 ECWGEEFEKLYTSYEKEGRVKRVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIVE++S +E AVCNLASIAL YV + F
Sbjct: 421 GTIKSSNLCTEIVEYTSSDEVAVCNLASIALNMYVTPECT-------------------F 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +LA VTK++ NLNKIID+N+YP+ RSN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFHKLAAVTKVVVRNLNKIIDINYYPVPEAERSNRRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LN IFETIYY AL+AS +LA + GPYE+Y GSP+SKG+LQ DMW TP++ WDW
Sbjct: 522 PEAQLLNTQIFETIYYAALEASCQLAAELGPYESYEGSPVSKGVLQYDMWGKTPTELWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+++GVRNSLL+APMPTAST+QILGNNE E YTSNIYTRRVLSGEF +VN HL
Sbjct: 582 QQLKERIARHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K ++I NGSV I IP ++K +YKTVWEI QKT++ MAADRG +
Sbjct: 642 LKDLTERGLWNEDMKNQLIAHNGSVQNIDGIPNDVKQLYKTVWEISQKTVIKMAADRGAF 701
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSK-GMKTGMYYLRTRAAADAI--KFTVDTSVLN 777
IDQSQS+NIH+ +P++GKLTS+HFY W + G +TR + + + D VL
Sbjct: 702 IDQSQSMNIHIAEPNYGKLTSMHFYGWKQVGPAQPQLRPQTRVKTNLLCSPGSEDGDVLP 761
Query: 778 NEKANRADNDVEA 790
++A R + V +
Sbjct: 762 EDEARRQPHPVHS 774
>gi|47222551|emb|CAG02916.1| unnamed protein product [Tetraodon nigroviridis]
Length = 898
Score = 1044 bits (2699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/917 (56%), Positives = 648/917 (70%), Gaps = 132/917 (14%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPV----------------------------- 37
DGR+E V FDKIT+R++KL YGL+ E DPV
Sbjct: 1 DGRQEAVSFDKITSRVQKLCYGLNSEFVDPVSTNRQCGPVGQTGPLCVLVPVTRLLWLCQ 60
Query: 38 -LVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSE 96
+ KV G+Y GVTT +LD LAAETAA +T HPDYA+LA R+AVSNLHK TK FS+
Sbjct: 61 AQITLKVIQGLYSGVTTAELDTLAAETAATLTTKHPDYAILAARIAVSNLHKETKKVFSD 120
Query: 97 TIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYL 156
++D+YNY N + + +++ + II +N A L+ AIIYDRDF +++FGFKTLERSYL
Sbjct: 121 VMEDLYNYVNPLNKLHSPMISKETLHIIRENKARLNSAIIYDRDFSYNFFGFKTLERSYL 180
Query: 157 LKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLS 216
LK++ +V ERPQHMLMRV+VGIH+ D ++A++TY+L+S+ WFTHA+PTLFNAGT + QLS
Sbjct: 181 LKINGKVAERPQHMLMRVAVGIHQADMEAAIETYNLLSERWFTHASPTLFNAGTNRSQLS 240
Query: 217 SCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPML 276
SCFLL MKDDSIEGIYDTLK+CA++SKSAGGIGL++ IRA+GSYI GTNG SNG+VPML
Sbjct: 241 SCFLLTMKDDSIEGIYDTLKQCALVSKSAGGIGLAVSCIRATGSYIAGTNGKSNGLVPML 300
Query: 277 QVFNDTARYVDQGG----------------------------GKRKGAFAIYLEPWHADI 308
+V+N+TARYVDQGG G+R GAFA+YLEPWH+D+
Sbjct: 301 RVYNNTARYVDQGGNKVRMKVGEQTASRLRNIRDVIQVWLFLGQRPGAFAVYLEPWHSDV 360
Query: 309 FEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFE 368
F+FL+L+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CPS+ GL D WG EFE
Sbjct: 361 FDFLELKKNTGKEEQRARDLFFALWIPDLFMKRVESNQDWSLMCPSECPGLTDCWGEEFE 420
Query: 369 HLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNL 428
LY++YE+EGRAK V+ A++LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNLGTI+ SNL
Sbjct: 421 ELYTRYEKEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNLGTIRCSNL 480
Query: 429 CTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEV 488
CTEIVE++S +E AVCNLASIAL YV + R +DF +LA V
Sbjct: 481 CTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPQRTYDFHKLASV 521
Query: 489 TKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNK 548
TK I +NLNKIID+N+YP+ +RSNLRHRPIGIG+QGLAD FIL+ P+ESPEAQ LN
Sbjct: 522 TKTIVKNLNKIIDINYYPVPEAKRSNLRHRPIGIGVQGLADAFILMRHPYESPEAQLLNT 581
Query: 549 DIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMIS 608
IFETIY+ AL+AS ELA + GPY+TY GSP+S+G+LQ DMW TP+D WDW++L+E I+
Sbjct: 582 QIFETIYHAALEASCELAAEFGPYQTYAGSPVSRGVLQYDMWGKTPTDLWDWTALKEKIA 641
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV------------- 655
K+GVRNSLL+APMPTAST+QILGNNE FE YTSNIYTRRVLSGEF V
Sbjct: 642 KHGVRNSLLLAPMPTASTAQILGNNESFEAYTSNIYTRRVLSGEFQVCTRAFRPSLTAAG 701
Query: 656 ------------VNKHLLKDLTELGLWSHALKTKIIYENGSV------------------ 685
VN HLLKDLTE GLWS +K ++I NGS+
Sbjct: 702 KAERKIWPRLQIVNPHLLKDLTERGLWSDGMKNQLIAHNGSIQVERRICCISSTISLWQK 761
Query: 686 -----------SKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQP 734
I EIP++LK +YKTVWEI QKT++ MAADRG +IDQSQSLNIH+ +P
Sbjct: 762 PIFYKYFFNGQQNIPEIPDDLKQLYKTVWEISQKTVLKMAADRGAFIDQSQSLNIHIAEP 821
Query: 735 DHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDV-EANLA 793
++GKLTS+HFY W G+KTGMYYLRT+ AA+ I+FT++ L +A R++ + E N A
Sbjct: 822 NYGKLTSMHFYGWKLGLKTGMYYLRTKPAANPIQFTLNKETLKEAQAARSEEESKERNAA 881
Query: 794 QVVCSLKNQEECMACGS 810
VVCSL N++ECM CGS
Sbjct: 882 AVVCSLANKDECMMCGS 898
>gi|22164662|ref|NP_671575.1| EVM057 [Ectromelia virus]
gi|22123803|gb|AAM92361.1|AF523264_57 EVM057 [Ectromelia virus]
gi|383866777|gb|AFH54620.1| ribonucleotide reductase large subunit [Ectromelia virus]
Length = 771
Score = 1043 bits (2697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/772 (62%), Positives = 609/772 (78%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVVKRNGCRENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +SA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV DDG+WSL CP++ GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVNDDGEWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
++WG EFE LY+QYE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NAWGDEFERLYTQYEREKRYKNIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNVFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYAGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I +G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 ESLKDKIRSHGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +II + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNEEIKNRIIADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+AA+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKAASSPIQFTLD 751
>gi|294871762|ref|XP_002766029.1| ribonucleoside-diphosphate reductase large chain, putative
[Perkinsus marinus ATCC 50983]
gi|239866594|gb|EEQ98746.1| ribonucleoside-diphosphate reductase large chain, putative
[Perkinsus marinus ATCC 50983]
Length = 1504
Score = 1042 bits (2695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/782 (64%), Positives = 622/782 (79%), Gaps = 22/782 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKR+G+K V+FDKIT R++ L+ GL++++ D + QKV G+Y GVTTT+LD LA
Sbjct: 3 MYVIKRNGQKADVQFDKITKRIRPLTRGLNEDYVDVTQITQKVAEGIYPGVTTTELDSLA 62
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A M+ HPD++ LA R+AVSNLHK T SFSETI ++YN + R G+ + LV+++V
Sbjct: 63 AETCAYMSQVHPDFSTLAARIAVSNLHKNTHESFSETITELYNITDSR-GRSSPLVSEEV 121
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM--DSRVVERPQHMLMRVSVGI 178
Y I+ NA LD AI YDRDFD+DYFGFKTLERSYLLK D +ERPQHM+MRV+VGI
Sbjct: 122 YNIVKMNADKLDKAIDYDRDFDYDYFGFKTLERSYLLKRPSDKTCIERPQHMIMRVAVGI 181
Query: 179 HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
H DD D+A++TY LMS FTHATPTLFN+GTP PQ+SSCFLL +K+DSIEGIYDTLK+C
Sbjct: 182 HGDDVDAAIETYALMSTRVFTHATPTLFNSGTPHPQMSSCFLLSIKEDSIEGIYDTLKQC 241
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIG++I IRA+ SYI GTNG SNGIVPML+VFNDTARYVDQGGGKRKG+FA
Sbjct: 242 AMISKTAGGIGVAITGIRATESYIRGTNGFSNGIVPMLRVFNDTARYVDQGGGKRKGSFA 301
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
+YLEPWHAD+FEFLDL+KN GKEE RARDLFYALW+PDLFM+RV +G W+LFCP++A G
Sbjct: 302 VYLEPWHADVFEFLDLKKNHGKEEHRARDLFYALWIPDLFMKRVMANGDWTLFCPNEAPG 361
Query: 359 LADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQ 418
L D++G EFE LY +YE++G + + A+ LWF+IL SQ ETG PYML+KDS NRKSNQ+
Sbjct: 362 LQDTYGEEFEALYEKYEKDGIGRKTVKAQSLWFKILESQQETGIPYMLYKDSANRKSNQK 421
Query: 419 NLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNR 478
NLGTI+ SNLC EI+E++S +E AVCNLASIAL +V D K R
Sbjct: 422 NLGTIRCSNLCCEIIEYTSSDEVAVCNLASIALNMFV------------------DKKTR 463
Query: 479 LFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
+DF+RL V K++T+NLNK+ID N+YP+ R+SN+RHRPIGIG+QGLAD F+L+ P+
Sbjct: 464 TYDFDRLHRVAKVVTKNLNKVIDRNYYPVPEARKSNMRHRPIGIGVQGLADAFLLMRYPY 523
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDR 597
ESPEA +LN DIFETIY+ A +AS ELA +DGPYET+ GSP S+GILQ DMW++ P S R
Sbjct: 524 ESPEALKLNNDIFETIYHAACEASMELAKRDGPYETFQGSPASEGILQFDMWDVIPDSGR 583
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+SL+E I KNG+RNSLL+APMPTAST+QILGNNE FEPYT NIY RRVL+GEF+ VN
Sbjct: 584 WDWASLKEEIKKNGMRNSLLIAPMPTASTAQILGNNEAFEPYTQNIYVRRVLAGEFVQVN 643
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
+HL+ DL ELGLW+ +K KII + GSV + EIP E++ +YKTVWEIKQK ++DMAA R
Sbjct: 644 RHLVDDLMELGLWNDEIKDKIIRKKGSVQGVEEIPSEIQDLYKTVWEIKQKKILDMAAGR 703
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G YIDQSQSLNIHM + KL+S+HFY W G+KTG YYLRT+AAADAI+FT+D +
Sbjct: 704 GPYIDQSQSLNIHMTNCTNAKLSSMHFYGWKLGLKTGQYYLRTKAAADAIQFTLDAKKVT 763
Query: 778 NE 779
E
Sbjct: 764 VE 765
>gi|207345939|gb|EDZ72594.1| YER070Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 732
Score = 1042 bits (2694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/747 (63%), Positives = 604/747 (80%), Gaps = 15/747 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRDGRKEPV+FDKITAR+ +L YGL +H D V V Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ ++D+Y Y N +GK A +++DDV
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+N L+ AI+YDRDF + YFGFKTLERSYLL+++ +V ERPQH++MRV++GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++AL+TY+LMS +FTHA+PTLFNAGTP+PQ+SSCFL+ MK+DSIEGIYDTLK+CA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNG++PM++VFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV ++G W+LF P+ A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+EGR K I A+KLW+ IL +Q ETGTP++++KD+CNRKSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRGK-TIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLC EIVE+S+P+ETAVCNLAS+ALP ++ S D K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+ K++T NLN++ID N+YP+E R+SN+RHRPI +G+QGLADTF+LL LPF+S
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN IFETIY+ +++AS ELA KDGPYET+ GSP S+GILQ DMW+ P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGIRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W +K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAADR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAW 747
IDQS SLN+ + P GKLTS+HFY W
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGW 732
>gi|393909613|gb|EFO27839.2| ribonucleoside-diphosphate reductase large subunit [Loa loa]
Length = 1048
Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/785 (61%), Positives = 604/785 (76%), Gaps = 19/785 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV+KRDGR E V FDKI R+ KL YGLS++ D + ++QKV AG+YKGVTT +LD LAA
Sbjct: 12 YVVKRDGRHEAVSFDKIARRIMKLCYGLSQDRVDHIEISQKVIAGLYKGVTTVELDNLAA 71
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
E AA M HPDYA LA R+AVSNLHK T+ FS+ K +YN + +SG+ L++ +++
Sbjct: 72 EIAADMITKHPDYATLASRIAVSNLHKKTEKLFSKVSKRLYNATHPKSGRHMPLISKNIF 131
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
+II NA LD AII++RDF + YFG KTLERSYLL+++ + ERPQHMLMRV++GIH D
Sbjct: 132 DIIQNNADILDSAIIHERDFCYTYFGLKTLERSYLLQINGELAERPQHMLMRVALGIHGD 191
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
+ ++AL+TY+LMS+ WFTHATPTLFN+GT PQ+SSCFLL M DDSIEGI++TLKKCA+I
Sbjct: 192 NIEAALETYNLMSERWFTHATPTLFNSGTCTPQMSSCFLLTMFDDSIEGIFETLKKCALI 251
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKSAGGIGL++H IRA+GS I GTNG SNG+VPML+VFN+ ARYVDQGG KR GAFA+YL
Sbjct: 252 SKSAGGIGLNVHCIRATGSAIAGTNGVSNGLVPMLRVFNNAARYVDQGGNKRPGAFAVYL 311
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHADIF+FL+LRKN G E R RDLF+ LWVPDLFMERVRDD WSL CP++ GL D
Sbjct: 312 EPWHADIFDFLELRKNVGDELERCRDLFFGLWVPDLFMERVRDDKVWSLMCPAECPGLED 371
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
SWG FE LY QYEEEGR + + ARKLW I+++QIETG PYM++KD+CNRK+NQQNLG
Sbjct: 372 SWGEAFEKLYMQYEEEGRYRKQVPARKLWETIVSTQIETGMPYMVYKDTCNRKTNQQNLG 431
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIK SNLCTE+V +SS EE AVCNLASIAL R+V S FD
Sbjct: 432 TIKCSNLCTEVVLYSSREEIAVCNLASIALSRFV-------------------SSEMTFD 472
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F+ L E+TK++ NLNK+ID N+YP+ RSN RHRPIGIG+QGLAD FIL+ PF S
Sbjct: 473 FKMLREITKVVVRNLNKVIDRNYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFTSE 532
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
+A+ LNK IFET+YY AL+AS ELA++ GPYE+Y SP+S+GILQ DMW +TP+++WDW
Sbjct: 533 KARDLNKRIFETMYYAALEASCELAMEQGPYESYERSPVSRGILQFDMWGVTPTNQWDWE 592
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
+LR+ I+ G+RNSLL+APMPTAST+QILGNNE EPYTSN+YTR VLSG F V N HL+
Sbjct: 593 TLRKKIAMYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNVYTRNVLSGSFQVFNMHLM 652
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
DL L LW +K +II GS+ I IP+E++ +YKTVWE+ Q+ ++DMA DRG +I
Sbjct: 653 NDLMRLDLWDDDMKLEIIKNKGSIRNIERIPQEIRDLYKTVWEMSQRDIIDMAVDRGAFI 712
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
D SQSLNI + +P++G +TS+HFY W KG+KTGMYYLRTR A DA++FTVD + L +
Sbjct: 713 DHSQSLNIFIARPNYGNITSMHFYGWQKGLKTGMYYLRTRPAVDAVQFTVDKTRLKDYAN 772
Query: 782 NRADN 786
AD+
Sbjct: 773 ANADD 777
>gi|410075974|ref|XP_003955569.1| hypothetical protein KAFR_0B01350 [Kazachstania africana CBS 2517]
gi|372462152|emb|CCF56434.1| hypothetical protein KAFR_0B01350 [Kazachstania africana CBS 2517]
Length = 847
Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/784 (59%), Positives = 617/784 (78%), Gaps = 15/784 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPVRFDKITAR+++LSYGL + D + Q++ +G+Y+GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVRFDKITARVERLSYGLDPKQVDAARITQRIISGIYEGVTTQELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDY LA R+A+SNLHK TK FS+ + D+YNY N +GK A +++ V
Sbjct: 61 AETCAYMTTIHPDYGTLAARLAISNLHKQTKKQFSQVMDDLYNYVNPTTGKHAPVISQRV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+EIIMKN +D I+YDRD+ F+YFG+KTLERSYLLK++ +V ERPQH+LMRV++GIH
Sbjct: 121 HEIIMKNKDVIDSTIVYDRDYKFNYFGYKTLERSYLLKINGQVAERPQHLLMRVAIGIHM 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD ++A +TY+LMS+ +F HATPTLFNAGTP+PQ+SSCFL+ MKDDSI+GI++TLK+CA+
Sbjct: 181 DDLEAAFETYNLMSEKYFIHATPTLFNAGTPRPQMSSCFLVSMKDDSIDGIFETLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+ +H+IR +GSYI GTNG+S G++P++ V+N TARYVDQGG +R GA A +
Sbjct: 241 ISKSAGGIGVHVHDIRGTGSYIQGTNGTSKGLMPVVGVYNTTARYVDQGGNRRPGAIAFF 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+F+F+++RKN G E+ RARDLF ALW+PDLFM+RV D KW+LF S+A GL+
Sbjct: 301 LEPWHPDVFDFIEMRKNHGDEKYRARDLFPALWIPDLFMKRVEADTKWTLFSSSEAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE L+ +YE EGR K I ARKLW IL++Q ETGTP+M +KD+ N+KSNQ+NL
Sbjct: 361 DVYGDEFEALFERYEREGRGK-TIKARKLWQAILDAQTETGTPFMCYKDAANQKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EI+E+S+PEETAVCNLAS+ LP ++ S D+K +
Sbjct: 420 GTIKSSNLCCEIIEYSNPEETAVCNLASVCLPTFIEY--------------SEDNKTSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+FE+L +++K+IT NLN++ID N+YP+ R+SN++HRPI +G+QGLADTF+LL LPFES
Sbjct: 466 NFEKLHKISKVITRNLNRVIDNNYYPVPEARKSNMKHRPIALGVQGLADTFMLLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA +LNK IFET+Y+ +L+AS ELA ++G YET+ GSP S+GILQ+D+WN P WDW
Sbjct: 526 DEATKLNKQIFETMYHASLEASCELAQEEGAYETFQGSPASQGILQMDLWNSKPFGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K G+RNSL +APMPTASTSQI+G NECFEP TSN+Y RR +SGEF +VN +L
Sbjct: 586 ETLRKDIVKYGIRNSLTMAPMPTASTSQIMGFNECFEPVTSNMYQRRTISGEFQIVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W +K +I +NGS+ + +P+E+K +YKTVWEI QK ++DMAADR Y
Sbjct: 646 LRDLVDLGIWDDGMKQYLITQNGSIQDLPNVPDEIKELYKTVWEISQKKILDMAADRSIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLN+ + P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D SV +
Sbjct: 706 IDQSHSLNLFIRAPTMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQSVADQAA 765
Query: 781 ANRA 784
N A
Sbjct: 766 NNIA 769
>gi|20178449|ref|NP_619870.1| CPXV083 protein [Cowpox virus]
gi|20153067|gb|AAM13528.1|AF482758_79 CPXV083 protein [Cowpox virus]
Length = 771
Score = 1040 bits (2689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/772 (63%), Positives = 605/772 (78%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +SA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY+QYE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 DVWGDEFERLYTQYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPYETY GS S GILQ D+WN+ PSD WDW
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNVVPSDLWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 ESLKDKIRSYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNEEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|402591720|gb|EJW85649.1| ribonucleoside-diphosphate reductase [Wuchereria bancrofti]
Length = 813
Score = 1040 bits (2688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/821 (59%), Positives = 616/821 (75%), Gaps = 31/821 (3%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV+KRDGR E V FDKI R+ KL YGLS++ D + ++QKV AG+YKGVTT +LD LAA
Sbjct: 12 YVVKRDGRHEAVSFDKIARRIMKLCYGLSQDRVDHIEISQKVIAGLYKGVTTVELDNLAA 71
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
E AA M HPDYA LA R+ VSNLHK T+ SFS+ +YN + +SG+ L++ +++
Sbjct: 72 EIAADMITKHPDYATLASRITVSNLHKKTEKSFSKLSGRLYNATHPKSGRHMPLISKELF 131
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
+II NA LD AI+++RD+ + YFG KTLERSYLL+++ + ERPQHMLMRV++GIH +
Sbjct: 132 DIIQNNANFLDSAIVHERDYLYTYFGLKTLERSYLLQINGELAERPQHMLMRVALGIHGE 191
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
+ ++AL+TY+LMS+ WFTHATPTLFN+GT PQ+SSCFLL M +DSIEGI++TLKKCA+I
Sbjct: 192 NIEAALETYNLMSERWFTHATPTLFNSGTCTPQMSSCFLLTMFEDSIEGIFETLKKCALI 251
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKSAGGIGL++H IRA+GS I GTNG SNG+VPML+VFN+ ARYVDQGG KR GAFAIYL
Sbjct: 252 SKSAGGIGLNVHCIRAAGSAIAGTNGVSNGLVPMLRVFNNAARYVDQGGNKRPGAFAIYL 311
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHADIF+FL+LRKN G E R RDLF+ LWVPDLFMERVRDD WSL CP++ GL D
Sbjct: 312 EPWHADIFDFLELRKNVGDELERCRDLFFGLWVPDLFMERVRDDKIWSLMCPAECPGLED 371
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
SWG FE LY+QYEEEGR + + ARKLW I+ +QIETG PYM++KD+CNRK+NQQNLG
Sbjct: 372 SWGEAFEKLYTQYEEEGRYRKQVPARKLWETIVFTQIETGVPYMVYKDTCNRKTNQQNLG 431
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIK SNLCTE+V +SS EE AVCNLASIAL R+V + +D
Sbjct: 432 TIKCSNLCTEVVLYSSREEIAVCNLASIALSRFV-------------------TSEMTYD 472
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F L EVTK++ +NLNK+ID N+YP+ RSN RHRPIGIG+QGLAD FIL+ PF S
Sbjct: 473 FNMLHEVTKVVVKNLNKVIDRNYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFTSE 532
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
+A+ LNK IFET+YY AL+AS +LA + GPYE+Y GSP+SKGILQ DMW +TP+D+WDW
Sbjct: 533 KARDLNKRIFETMYYAALEASCDLAKEQGPYESYEGSPISKGILQFDMWGVTPTDQWDWE 592
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
LRE I+K G+RNS+L+APMPTAST+QILGNNE EPYTSN+YTR VLSG F + N HL+
Sbjct: 593 ILREKIAKYGIRNSVLLAPMPTASTAQILGNNESIEPYTSNVYTRNVLSGSFQIFNMHLM 652
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
DL L LW +K +II GS+ I IP+E++ +YKTVWE+ Q+ ++DMAADRG +I
Sbjct: 653 NDLMHLDLWDDDMKLEIIKNKGSIQNIERIPQEIRDLYKTVWEMSQRDIIDMAADRGAFI 712
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
DQSQSLNI + +P++G +TS+HFY W KG+KTGMYYLRTR A DA++FTVD + L
Sbjct: 713 DQSQSLNIFIARPNYGNITSMHFYGWQKGLKTGMYYLRTRPAVDAVQFTVDKTRLKEYDN 772
Query: 782 NRAD----------NDVEANLAQVV--CSLKNQEECMACGS 810
AD + LA V C+L +EC+ C S
Sbjct: 773 INADKNSKSSSSSTPATTSKLATKVMECTLSTGDECLMCSS 813
>gi|357612500|gb|EHJ68034.1| hypothetical protein KGM_04264 [Danaus plexippus]
Length = 780
Score = 1040 bits (2688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/810 (61%), Positives = 626/810 (77%), Gaps = 37/810 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV+KRDGR E V DKIT+R+KKL YGL+ + DPV + KV +G+Y GVTT +LD LA
Sbjct: 8 LYVLKRDGRMEEVHIDKITSRIKKLCYGLNMDFVDPVSITLKVISGIYSGVTTVELDNLA 67
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT +HPDYA+LA R+A+SNLHK TK FS+ + D+YN N + K++ +++D
Sbjct: 68 AETAATMTTDHPDYAILAARLAISNLHKETKKHFSDVMTDLYNIINPYTKKRSPMISDFH 127
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIM N LD AI+YDRDF ++YFGFKTLERSYLL+++++V ERPQHMLMRV++GIH
Sbjct: 128 YEIIMNNKDRLDSAIVYDRDFKYNYFGFKTLERSYLLRINNKVAERPQHMLMRVAIGIHD 187
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A+ TY+L+S+ +FTHA+PTLF+A TP+PQLSSCFL+ MKDDSIEGIY
Sbjct: 188 KDIDAAINTYNLLSEKYFTHASPTLFSAATPRPQLSSCFLIGMKDDSIEGIY-------- 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
IGL IH IRA G+YI GTNG SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 240 -------IGLHIHCIRAKGTYIAGTNGISNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 292
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+DIFEFLDL+KN GKEE RAR+LFYALW+PDLFM+RV + WSL CP + GL
Sbjct: 293 VEPWHSDIFEFLDLKKNTGKEEVRARELFYALWIPDLFMKRVERNENWSLMCPHNCPGLY 352
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+E R + A+ LW I+ +Q+ETGTPYML+KD+CNRKSNQ+NL
Sbjct: 353 DCYGEEFEALYEKYEQENRFVRQVRAQILWKAIIEAQVETGTPYMLYKDACNRKSNQKNL 412
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLASIAL +V +N+ F
Sbjct: 413 GTIKCSNLCTEIVEYTSEDEVAVCNLASIALNMFV--------------------ENKKF 452
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTK +T+NLNKIIDVN YP+ + SN++HRPIGIG+QGLAD F+L+ LP+ES
Sbjct: 453 DFKKLKEVTKTVTQNLNKIIDVNFYPVPEAKNSNMKHRPIGIGVQGLADAFVLMRLPYES 512
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+A LN+ IFETIYY AL+AS ELA +DG Y TY GSP S+GILQ DMWN TP+D WDW
Sbjct: 513 EKAILLNQQIFETIYYGALEASCELAERDGVYSTYEGSPASQGILQYDMWNKTPTDLWDW 572
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L+E I+K+G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN HL
Sbjct: 573 AALKEKIAKHGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNHHL 632
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L DLT+ LW +K II+ NGS+ I IP++++ +YKTVWEI KT + MAADRG +
Sbjct: 633 LTDLTQADLWDEEMKNLIIHNNGSIQNIEAIPKDIRDLYKTVWEISVKTTIQMAADRGAF 692
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQS NIH+ +P++GKLTS+HFYAW G+KTGMYYLRT+ AA+AI+FTVD S +
Sbjct: 693 IDQSQSFNIHVAEPNYGKLTSIHFYAWKMGLKTGMYYLRTKPAANAIQFTVDKSKVKITN 752
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
N A D EA+++ + CSL N++EC++CGS
Sbjct: 753 GN-AQKD-EASMSMIACSLANKDECLSCGS 780
>gi|325559314|gb|ADZ30689.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1039 bits (2686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/772 (62%), Positives = 605/772 (78%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +SA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+QYE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTQYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPYETY GS S GILQ D+WN+ PSD WDW
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNVVPSDLWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 ESLKDKIRSYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNEEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|90660311|gb|ABD97425.1| ribonucleotide reductase large subunit [Cowpox virus]
Length = 771
Score = 1038 bits (2684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/772 (62%), Positives = 604/772 (78%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIIAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY+QYE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 DVWGDEFERLYTQYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V ++ F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVIDER--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|325558457|gb|ADZ29836.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1038 bits (2683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/772 (63%), Positives = 604/772 (78%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +SA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY+QYE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 DVWGDEFERLYTQYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD WDW
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 ESLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|325559101|gb|ADZ30477.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1037 bits (2681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/772 (63%), Positives = 605/772 (78%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+QYE E R K +I+AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTQYERERRYKSIINARVIWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFFKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPYETY GS S GILQ D+WNI PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNIVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 ESLKDKIRSYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|325557813|gb|ADZ29195.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1036 bits (2679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/772 (62%), Positives = 604/772 (78%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +SA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY+QYE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 DVWGDEFERLYTQYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNEEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|30519447|emb|CAD90622.1| L4L protein [Cowpox virus]
Length = 771
Score = 1036 bits (2678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/772 (62%), Positives = 604/772 (78%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +SA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY+QYE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 DVWGDEFERLYTQYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNEEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|325558889|gb|ADZ30266.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1035 bits (2677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/772 (62%), Positives = 603/772 (78%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS ELA K+GPYETY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQIVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|325558027|gb|ADZ29408.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/772 (62%), Positives = 604/772 (78%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +SA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEYRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+QYE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTQYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V ++ F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVIDER--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPYETY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|373448219|gb|AEY73601.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 771
Score = 1035 bits (2675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/772 (62%), Positives = 603/772 (78%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRRQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+QYE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTQYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|325558674|gb|ADZ30052.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1035 bits (2675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/772 (62%), Positives = 604/772 (78%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIIAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D G EFE LY+QYE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 DVCGDEFERLYTQYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V ++ F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVIDER--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WNI PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNIVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 581 ESLKDKIRSYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQIVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|373447735|gb|AEY73119.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|373449644|gb|AEY75020.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 771
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/772 (62%), Positives = 603/772 (78%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+QYE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTQYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|325558243|gb|ADZ29623.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1033 bits (2672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/772 (62%), Positives = 603/772 (78%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPYETY GS S GILQ D+WNI PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNIVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 581 ESLKDKIRSYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQIVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|68448942|gb|AAY97064.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
gi|68449144|gb|AAY97265.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
gi|300872688|gb|ADK39090.1| ribonucleotide reductase protein large subunit [Monkeypox virus]
gi|451327749|gb|AGF36621.1| ribonucleotide reductase large subunit [Monkeypox virus]
gi|451327957|gb|AGF36828.1| ribonucleotide reductase large subunit [Monkeypox virus]
gi|451328099|gb|AGF36969.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
Length = 771
Score = 1033 bits (2672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/808 (60%), Positives = 613/808 (75%), Gaps = 39/808 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+A+SNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAISNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +LA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCKLAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EHLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D +
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--- 756
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMAC 808
QVVC + E C +C
Sbjct: 757 ------------PQVVC---DSEICTSC 769
>gi|85001013|ref|XP_955225.1| ribonucleoside-diphosphate reductase large chain [Theileria
annulata strain Ankara]
gi|65303371|emb|CAI75749.1| ribonucleoside-diphosphate reductase large chain, putative
[Theileria annulata]
Length = 891
Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/779 (62%), Positives = 596/779 (76%), Gaps = 27/779 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVI R G KE V FDKI R++KLS GL D V Q V G+Y G+ T++LDELA
Sbjct: 60 MYVINRHGEKEDVSFDKILNRIRKLSLGL-HSLVDAPRVTQSVINGMYTGIRTSELDELA 118
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNY---YNKRSGKKASLVA 117
A+T A M V HPDY+ LA + + NLHK T N FSE I+ +++Y YN ASL++
Sbjct: 119 AQTCAYMAVTHPDYSRLAANITIDNLHKNTLNDFSEVIRVLHSYKHVYNT----NASLIS 174
Query: 118 DDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
DDV+E +M+N L+ I Y RDF +DYFGFKTLERSYLLK + ++VERPQHM+MRVS G
Sbjct: 175 DDVFEFVMENKDRLNAEIDYSRDFQYDYFGFKTLERSYLLKTNGKIVERPQHMIMRVSAG 234
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
IH D + ++TYHLMSQ +FTHATPTLFNAGT PQ+SSCFLL M+DDS+ GI++TL +
Sbjct: 235 IHCGDLERTIQTYHLMSQRYFTHATPTLFNAGTKHPQMSSCFLLDMQDDSLAGIFNTLSQ 294
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
CA ISKSAGGIGL+IH IRASGSYI GTNG SNGIVPML++FN TA+YVDQGGGKRKG+F
Sbjct: 295 CAFISKSAGGIGLAIHKIRASGSYIRGTNGISNGIVPMLKIFNSTAKYVDQGGGKRKGSF 354
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
AIYLEPWHADIF+ LDLRKN G E+ RARDLFYALW+PDLFM+RV + W+L CP +
Sbjct: 355 AIYLEPWHADIFKLLDLRKNHGSEDQRARDLFYALWIPDLFMKRVEANKNWTLMCPDECR 414
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
GL + WG EFE LY+QYE++G + I A+KLWF IL SQIETGTPYML+KD+CN KSNQ
Sbjct: 415 GLYEVWGDEFERLYTQYEQQGMGRKTIPAQKLWFAILQSQIETGTPYMLYKDACNSKSNQ 474
Query: 418 QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKN 477
QNLGTIKSSNLC EIV+F+S +E AVCNLAS+ALP++V +++
Sbjct: 475 QNLGTIKSSNLCCEIVQFTSKDEVAVCNLASVALPKFV------------------NTQT 516
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
R FDF++L E+ ++IT NLNK+ID N+YP++ R SN RHRP+G+G+QGLADTF+L+ P
Sbjct: 517 RTFDFKKLYEICRVITYNLNKVIDRNYYPVKQARASNFRHRPMGVGVQGLADTFMLMRYP 576
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR 597
FES EA++LNK IFET+YY L S +LA + G YE+Y GSP SKG+LQ D+W +
Sbjct: 577 FESDEARELNKRIFETMYYACLSESIDLARQYGTYESYEGSPASKGLLQFDLWGAKVDNS 636
Query: 598 -WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVV 656
WDW L+ + ++G+RNSL +APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VV
Sbjct: 637 LWDWDKLKADLREHGLRNSLFIAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVV 696
Query: 657 NKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAAD 716
N HLL DL +LGLW+ +K K+I NGS+ I EIP +K +YKTVWEIKQK ++DMAAD
Sbjct: 697 NPHLLNDLIDLGLWNETMKQKLIAYNGSLKHIDEIPSHIKELYKTVWEIKQKHIIDMAAD 756
Query: 717 RGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
RG +IDQSQSLNIHMEQP KLTS+HFY W KG+KTG+YYLRT+ A DAIKFTVD S+
Sbjct: 757 RGIFIDQSQSLNIHMEQPTFSKLTSMHFYGWKKGLKTGVYYLRTQPATDAIKFTVDASI 815
>gi|71027825|ref|XP_763556.1| ribonucleotide-diphosphate reductase large subunit [Theileria parva
strain Muguga]
gi|68350509|gb|EAN31273.1| ribonucleotide-diphosphate reductase large subunit, putative
[Theileria parva]
Length = 898
Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/799 (61%), Positives = 604/799 (75%), Gaps = 23/799 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVI R G KE V FDKI R++KLS GL D V Q V G+Y G+ T++LDELA
Sbjct: 60 MYVINRHGEKEDVSFDKILNRIRKLSLGL-HSLVDAPRVTQSVINGMYTGIRTSELDELA 118
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T A M V HPDY+ LA + + NLHK T N FSE I+ +++Y + + ASL++DDV
Sbjct: 119 AQTCAYMAVTHPDYSRLAANITIDNLHKNTLNDFSEVIRTLHSYKHVFN-TNASLISDDV 177
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+E +M N L+ I Y RDF +DYFGFKTLERSYLLK + ++VERPQHM+MRVS GIH
Sbjct: 178 FEFVMANKDRLNAEIDYSRDFQYDYFGFKTLERSYLLKTNGKIVERPQHMIMRVSAGIHC 237
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D + ++TYHLMSQ +FTHATPTLFNAGT PQ+SSCFLL M+DDS+ GI++TL +CA
Sbjct: 238 GDLERTIQTYHLMSQRYFTHATPTLFNAGTRHPQMSSCFLLDMQDDSLAGIFNTLSQCAF 297
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL+IH IRASGSYI GTNG SNGIVPML++FN TA+YVDQGGGKRKG+FAIY
Sbjct: 298 ISKSAGGIGLAIHKIRASGSYIRGTNGISNGIVPMLKIFNATAKYVDQGGGKRKGSFAIY 357
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+ LDLRKN G E+ RARDLFYALW+PDLFM+RV + W+L CP + GL
Sbjct: 358 LEPWHADIFKLLDLRKNHGAEDQRARDLFYALWIPDLFMKRVEANKNWTLMCPDECRGLH 417
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+QYE++G + I A+KLWF IL SQIETGTPYML+KD+CN KSNQQNL
Sbjct: 418 EVWGDEFERLYTQYEQQGLGRKTIPAQKLWFAILQSQIETGTPYMLYKDACNAKSNQQNL 477
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIV+F++ +E AVCNLAS+ALP++V +++ R F
Sbjct: 478 GTIKSSNLCCEIVQFTNKDEVAVCNLASVALPKFV------------------NTQTRTF 519
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L E+ ++IT NLNK+ID N+YP++ R SN RHRP+G+G+QGLADTF+L+ PFES
Sbjct: 520 DFKKLYEICRVITYNLNKVIDRNYYPVKQARVSNFRHRPMGVGVQGLADTFMLMRYPFES 579
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-WD 599
EA++LNK IFET+YY L S +LA + G YETY GSP SKG+LQ D+W + WD
Sbjct: 580 DEARELNKRIFETMYYACLSESIDLARQLGTYETYEGSPASKGLLQFDLWGAKVDNSLWD 639
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L+ + ++G+RNSL +APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 640 WDKLKADLREHGLRNSLFIAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 699
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL DL ELGLW+ +K K+I NGS+ I EIP+ +K +YKTVWEIKQK ++DMAADRG
Sbjct: 700 LLNDLIELGLWNETMKQKLIAYNGSLKHIDEIPQHIKDLYKTVWEIKQKHIIDMAADRGI 759
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
+IDQSQSLNIHMEQP KLTS+HFY W KG+KTG+YYLRT+ A DAIKFTVD S+
Sbjct: 760 FIDQSQSLNIHMEQPTFSKLTSMHFYGWKKGLKTGVYYLRTQPATDAIKFTVDASISQLA 819
Query: 780 KANRADNDV--EANLAQVV 796
K N + + NL ++
Sbjct: 820 KNRAKPNSIMSDGNLTSIM 838
>gi|19718013|gb|AAG37538.1| CMP70L [Camelpox virus CMS]
Length = 771
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/772 (62%), Positives = 603/772 (78%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA++A R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAIIAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHYDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V ++ F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVIDER--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLADTFILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADTFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|94484317|gb|ABF23431.1| ribonucleotide reductase large subunit [Variola virus]
gi|94489961|gb|ABF29047.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/772 (62%), Positives = 600/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE +KD++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G IY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|94483909|gb|ABF23025.1| ribonucleotide reductase large subunit [Variola virus]
gi|94484112|gb|ABF23227.1| ribonucleotide reductase large subunit [Variola virus]
gi|94485317|gb|ABF24426.1| ribonucleotide reductase large subunit [Variola virus]
gi|94485520|gb|ABF24628.1| ribonucleotide reductase large subunit [Variola virus]
gi|94487747|gb|ABF26844.1| ribonucleotide reductase large subunit [Variola virus]
gi|94488154|gb|ABF27249.1| ribonucleotide reductase large subunit [Variola virus]
gi|94488354|gb|ABF27448.1| ribonucleotide reductase large subunit [Variola virus]
gi|109726138|gb|ABG45254.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/772 (62%), Positives = 600/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE +KD++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G IY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKQVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|94485925|gb|ABF25031.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/772 (62%), Positives = 601/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE +KD++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G IY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARAVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW++ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNNEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|94486937|gb|ABF26038.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/772 (62%), Positives = 600/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE +KD++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G IY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASTPIQFTLD 751
>gi|37551518|gb|AAQ93170.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 771
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/772 (62%), Positives = 602/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIKTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|113195253|ref|YP_717383.1| ribonucleotide reductase large subunit [Taterapox virus]
gi|90660529|gb|ABD97642.1| ribonucleotide reductase large subunit [Taterapox virus]
Length = 771
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/772 (62%), Positives = 602/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHFPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|9627579|ref|NP_042102.1| hypothetical protein VARVgp058 [Variola virus]
gi|417658|sp|P32984.1|RIR1_VAR67 RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|62335|emb|CAA47558.1| ribonucleotide reductase (large subunit) [Variola virus]
gi|297239|emb|CAA48999.1| K4L [Variola virus]
gi|438976|gb|AAA60806.1| homolog of vaccinia virus CDS I4L (ribonucleotide reductase, large
subunit); putative [Variola major virus]
gi|544814|gb|AAB29605.1| K4L product [variola virus VAR, India-1967, Peptide, 771 aa]
gi|94483704|gb|ABF22821.1| ribonucleotide reductase large subunit [Variola virus]
gi|94484521|gb|ABF23634.1| ribonucleotide reductase large subunit [Variola virus]
gi|94484719|gb|ABF23831.1| ribonucleotide reductase large subunit [Variola virus]
gi|94484917|gb|ABF24028.1| ribonucleotide reductase large subunit [Variola virus]
gi|94485115|gb|ABF24225.1| ribonucleotide reductase large subunit [Variola virus]
gi|94485722|gb|ABF24829.1| ribonucleotide reductase large subunit [Variola virus]
gi|94486126|gb|ABF25231.1| ribonucleotide reductase large subunit [Variola virus]
gi|94486329|gb|ABF25433.1| ribonucleotide reductase large subunit [Variola virus]
gi|94487140|gb|ABF26240.1| ribonucleotide reductase large subunit [Variola virus]
gi|94487342|gb|ABF26441.1| ribonucleotide reductase large subunit [Variola virus]
gi|94487546|gb|ABF26644.1| ribonucleotide reductase large subunit [Variola virus]
gi|94487951|gb|ABF27047.1| ribonucleotide reductase large subunit [Variola virus]
gi|94488554|gb|ABF27647.1| ribonucleotide reductase large subunit [Variola virus]
gi|94488755|gb|ABF27847.1| ribonucleotide reductase large subunit [Variola virus]
gi|94488956|gb|ABF28047.1| ribonucleotide reductase large subunit [Variola virus]
gi|94489155|gb|ABF28245.1| ribonucleotide reductase large subunit [Variola virus]
gi|94489355|gb|ABF28444.1| ribonucleotide reductase large subunit [Variola virus]
gi|94489557|gb|ABF28645.1| ribonucleotide reductase large subunit [Variola virus]
gi|94490166|gb|ABF29251.1| ribonucleotide reductase large subunit [Variola virus]
gi|109724101|gb|ABG43227.1| ribonucleotide reductase large subunit [Variola virus]
gi|109724305|gb|ABG43430.1| ribonucleotide reductase large subunit [Variola virus]
gi|109724712|gb|ABG43835.1| ribonucleotide reductase large subunit [Variola virus]
gi|109724915|gb|ABG44037.1| ribonucleotide reductase large subunit [Variola virus]
gi|109725119|gb|ABG44240.1| ribonucleotide reductase large subunit [Variola virus]
gi|109725324|gb|ABG44444.1| ribonucleotide reductase large subunit [Variola virus]
gi|109725527|gb|ABG44646.1| ribonucleotide reductase large subunit [Variola virus]
gi|109725731|gb|ABG44849.1| ribonucleotide reductase large subunit [Variola virus]
gi|109725934|gb|ABG45051.1| ribonucleotide reductase large subunit [Variola virus]
gi|109726341|gb|ABG45456.1| ribonucleotide reductase large subunit [Variola virus]
gi|109726544|gb|ABG45658.1| ribonucleotide reductase large subunit [Variola virus]
gi|745175|prf||2015436BP K4L gene
Length = 771
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/772 (62%), Positives = 600/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE +KD++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G IY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|94486532|gb|ABF25635.1| ribonucleotide reductase large subunit [Variola virus]
gi|94486734|gb|ABF25836.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/772 (62%), Positives = 600/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE +KD++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G IY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMTFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|132610|sp|P20503.1|RIR1_VACCC RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|56404829|sp|Q76RD8.1|RIR1_VACCA RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|335407|gb|AAA48059.1| putative I4L [Vaccinia virus Copenhagen]
gi|2772697|gb|AAB96436.1| ribonucleotide reductase, large subunit [Vaccinia virus]
gi|38348940|gb|AAR17916.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|44971425|gb|AAS49775.1| RPXV062 [Rabbitpox virus]
gi|47088393|gb|AAT10463.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|56713441|gb|AAW23481.1| ribonucleoside-diphosphate reductase large subunit [Vaccinia virus]
gi|56713725|gb|AAW23763.1| ribonucleoside-diphosphate reductase large subunit [Vaccinia virus]
gi|88900691|gb|ABD57603.1| VACV069 [Vaccinia virus]
gi|90819733|gb|ABD98543.1| VACV-DUKE-081 [Vaccinia virus]
gi|160857955|emb|CAM58243.1| ribonucleotide reductase large subunit [Vaccinia virus Ankara]
gi|167412562|gb|ABZ79996.1| ribonucleotide reductase large subunit [Vaccinia virus GLV-1h68]
gi|373448450|gb|AEY73831.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|373448691|gb|AEY74071.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|373449403|gb|AEY74780.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|439965920|gb|AGB75794.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 771
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/772 (62%), Positives = 602/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|15617495|ref|NP_258291.1| RR1 [Spodoptera litura NPV]
gi|15553231|gb|AAL01709.1|AF325155_21 ribonucleotide reductase [Spodoptera litura NPV]
Length = 770
Score = 1031 bits (2666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/774 (61%), Positives = 607/774 (78%), Gaps = 20/774 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
+VIKRDGRKE V KI R++KL YGL +P VA +V G+Y GVTT +LD L A
Sbjct: 5 HVIKRDGRKEAVFMYKIKCRIEKLCYGLDMNFVNPTSVAVRVDQGIYSGVTTAELDNLIA 64
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAAAMT++H DY+LLA R+AVSNLHK TK+SF + I DMY + ++G K ++++ Y
Sbjct: 65 ETAAAMTIDHSDYSLLAARLAVSNLHKETKDSFFDVIIDMYEAIDPKTGVKTPMISNFHY 124
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
II NA L+ AI++DRDF++DYFGFKT++RSYL K++ VERPQ+M+MRV++GIH +
Sbjct: 125 NIIAANAYRLNSAIVHDRDFNYDYFGFKTMQRSYLFKINGVTVERPQYMMMRVAIGIHGE 184
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D D+A+ TY+LMS +FTHA+PTLF+A TP+ Q+SSCFL+ K+DSIEGIYDTLK+CA+I
Sbjct: 185 DIDAAIDTYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVATKEDSIEGIYDTLKQCAMI 244
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKS GGIG +HN+RA GS + G G+SNG+VPML+V+N+TARYVDQGG KR GAFA+YL
Sbjct: 245 SKSGGGIGFHVHNVRAKGSSVAGVGGASNGLVPMLRVYNNTARYVDQGGNKRPGAFAVYL 304
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+ +FLDL+KN GKEE RAR+LFYALW+PDLFM RV +D WSL CP + GLAD
Sbjct: 305 EPWHADVLDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVENDSMWSLMCPMQSPGLAD 364
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
+G EF+ LY +YEEEGR + A+ +W I+ SQ+ETGTPYML+KDSCNRKSNQ NLG
Sbjct: 365 CYGAEFDALYQKYEEEGRYVRRVHAQTMWRAIIESQVETGTPYMLYKDSCNRKSNQSNLG 424
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIK SNLCTEIVE++S +E AVCNLASIA+ ++V + GV +D
Sbjct: 425 TIKCSNLCTEIVEYTSKDEVAVCNLASIAVNKFVVQSGV-------------------YD 465
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
FE+L ++TKI+T NLN+ ID N YP+ + SNL++RPIGIG+QG+AD F+++ +P+ES
Sbjct: 466 FEKLKKITKIVTRNLNRTIDSNWYPLPEAKVSNLKNRPIGIGVQGMADAFVMMRMPYESV 525
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-NITPSDRWDW 600
A +LNK IFETIYY AL+AS ELA GPYETY GSP S+G+LQ DMW N+TPSD WDW
Sbjct: 526 AAAELNKKIFETIYYGALEASCELAAIYGPYETYEGSPASRGVLQYDMWDNVTPSDLWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S L+ ISK+G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL
Sbjct: 586 SMLKSKISKHGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+KDLT +GLW+ +K II+ NGSV +I IP E++ +YKTVWE+ +TL++MAADRG +
Sbjct: 646 VKDLTAIGLWNDTIKNLIIHNNGSVQRIESIPLEIRQLYKTVWEMSMRTLINMAADRGAF 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
IDQSQS N++M+ P +GKLTS+HFYAW G+KTGMYYLRT+ AA+AI+FTVD +
Sbjct: 706 IDQSQSFNVYMDLPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAANAIQFTVDKT 759
>gi|94489757|gb|ABF28844.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1031 bits (2666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/772 (62%), Positives = 599/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE +KD++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G IY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKKGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|18640305|ref|NP_570461.1| CMLV071 [Camelpox virus]
gi|18482981|gb|AAL73778.1|AF438165_68 ribonucleotide reductase large subunit [Camelpox virus M-96]
Length = 771
Score = 1031 bits (2666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/772 (62%), Positives = 602/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA++A R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAIIAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHYDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V ++ F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVIDER--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|62288418|gb|AAX78464.1| unknown [synthetic construct]
Length = 797
Score = 1031 bits (2665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/772 (62%), Positives = 602/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 27 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 86
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 87 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 146
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 147 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 206
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 207 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 266
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 267 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 326
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 327 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 386
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 387 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 446
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 447 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 486
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 487 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 546
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 547 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 606
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 607 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 666
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 667 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 725
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 726 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 777
>gi|164659252|ref|XP_001730750.1| hypothetical protein MGL_1749 [Malassezia globosa CBS 7966]
gi|159104648|gb|EDP43536.1| hypothetical protein MGL_1749 [Malassezia globosa CBS 7966]
Length = 850
Score = 1031 bits (2665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/749 (63%), Positives = 606/749 (80%), Gaps = 16/749 (2%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSF 94
DP+ + +KV G+Y+GVTT +LD LAAETAA T HPDYA+LA R+A+SNLHK TK SF
Sbjct: 5 DPIEITRKVIDGIYEGVTTVELDNLAAETAAYKTTTHPDYAVLAARIAISNLHKETKKSF 64
Query: 95 SETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERS 154
S+ I+D+++Y N ++G+ +S+++++ + +MK+ LD AIIY+RDF +++FGFKTLERS
Sbjct: 65 SQVIQDLHDYVNPKTGRPSSMISEETFNTVMKHRELLDSAIIYERDFHYNFFGFKTLERS 124
Query: 155 YLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQ 214
YLL+++ +V ERPQHMLMRV+VGIH +D +SA++TY+ MS+ FTHA+PTLFNAGTP PQ
Sbjct: 125 YLLRINGKVAERPQHMLMRVAVGIHGEDIESAIETYNYMSEKAFTHASPTLFNAGTPNPQ 184
Query: 215 LSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVP 274
+SSCFL+ MK+DSIEGIYDTLK CA+ISK+AGGIGL+IHNIR +GSYI GTNG SNGIVP
Sbjct: 185 MSSCFLVSMKEDSIEGIYDTLKTCAMISKTAGGIGLNIHNIRGTGSYIAGTNGVSNGIVP 244
Query: 275 MLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWV 334
ML+VFN+TARYVDQGG KR GAFAIYLEPWH D+FEF+DLRKN GK+E RARDLF A+WV
Sbjct: 245 MLRVFNNTARYVDQGGNKRPGAFAIYLEPWHPDVFEFVDLRKNHGKDEVRARDLFLAMWV 304
Query: 335 PDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEIL 394
PDLFM+RV + WSL CP++A GLAD +G EFE LY +YE EGRAK + A+KLW+ IL
Sbjct: 305 PDLFMKRVEKNEDWSLMCPAEAPGLADCYGEEFEELYERYEREGRAKRSVKAQKLWYAIL 364
Query: 395 NSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRY 454
+QIETG P+ML+KD+ NRKSNQ+NLGTIKSSNLCTEI+E+SSPEETAVCNLASIALP +
Sbjct: 365 EAQIETGNPFMLYKDAANRKSNQKNLGTIKSSNLCTEIMEYSSPEETAVCNLASIALPTF 424
Query: 455 VREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSN 514
+ G +++++F+RL +V K++ +NLN+IID+N+YP+ + RRSN
Sbjct: 425 IEGTGA----------------SKIYNFQRLHDVAKVVCKNLNRIIDINYYPVPSARRSN 468
Query: 515 LRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYET 574
+RHRPIGIG+QGLAD F+++G PF+S EA++LN IFETIY+ AL+ S ELA + G YET
Sbjct: 469 MRHRPIGIGVQGLADAFMIMGYPFDSQEARRLNLQIFETIYHAALERSCELAEQYGTYET 528
Query: 575 YFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNE 634
Y GSP S+GILQ DMWN TP+D WDW+SL+ I+++G+RNSLL+APMPTASTSQILG NE
Sbjct: 529 YQGSPASQGILQYDMWNRTPTDLWDWASLKAKIAQHGLRNSLLLAPMPTASTSQILGFNE 588
Query: 635 CFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEE 694
CFEPYT+NIY RRVL+GEF VVN LL++L ELGLW+ ++K KII GS+ I IP+
Sbjct: 589 CFEPYTNNIYMRRVLAGEFQVVNPWLLRELVELGLWNDSMKQKIIAHGGSIQNIPGIPDH 648
Query: 695 LKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTG 754
+KA+YKTVWEI QK ++DMAADRG ++ QSQSLNIH+ P G+LTS+HFY W KG+KTG
Sbjct: 649 IKALYKTVWEISQKVIIDMAADRGAFVCQSQSLNIHLSAPSFGQLTSMHFYGWKKGLKTG 708
Query: 755 MYYLRTRAAADAIKFTVDTSVLNNEKANR 783
YYLRTR AA AI+FTV + KA R
Sbjct: 709 SYYLRTRPAASAIQFTVSNEEIAEAKATR 737
>gi|66275870|ref|YP_232955.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|132611|sp|P12848.1|RIR1_VACCW RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|335666|gb|AAB59806.1| ribonucleotide reductase [Vaccinia virus]
gi|29692179|gb|AAO89352.1| ribonucleotide reductase large subunit [Vaccinia virus WR]
gi|325514088|gb|ADZ24082.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1031 bits (2665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/772 (62%), Positives = 602/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|373447260|gb|AEY72646.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 771
Score = 1031 bits (2665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/772 (62%), Positives = 602/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|294471329|gb|ADE80913.1| RR1 [Spodoptera litura NPV]
Length = 770
Score = 1030 bits (2664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/774 (61%), Positives = 607/774 (78%), Gaps = 20/774 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
+VIKRDGRKE V KI R++KL YGL +P VA +V G+Y GVTT +LD L A
Sbjct: 5 HVIKRDGRKEAVFMYKIKCRIEKLCYGLDMNFVNPTSVAVRVDQGIYSGVTTAELDNLIA 64
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAAAMT++H DY+LLA R+AVSNLHK TK+SF + I DMY + ++G K ++++ Y
Sbjct: 65 ETAAAMTIDHSDYSLLAARLAVSNLHKETKDSFFDVIIDMYEAIDPKTGVKTPMISNFHY 124
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
II NA L+ AI++DRDF++DYFGFKT++RSYL K++ VERPQ+M+MRV++GIH +
Sbjct: 125 NIIAANAYRLNSAIVHDRDFNYDYFGFKTMQRSYLFKINGVTVERPQYMMMRVAIGIHGE 184
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D D+A+ TY+LMS +FTHA+PTLF+A TP+ Q+SSCFL+ K+DSIEGIYDTLK+CA+I
Sbjct: 185 DIDAAIDTYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVATKEDSIEGIYDTLKQCAMI 244
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKS GGIG +HN+RA GS + G G+SNG+VPML+V+N+TARYVDQGG KR GAFA+YL
Sbjct: 245 SKSGGGIGFHVHNVRAKGSSVAGVGGASNGLVPMLRVYNNTARYVDQGGNKRPGAFAVYL 304
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+ +FLDL+KN GKEE RAR+LFYALW+PDLFM RV +D WSL CP + GLAD
Sbjct: 305 EPWHADVLDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVENDSMWSLMCPMQSPGLAD 364
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
+G EF+ LY +YEEEGR + A+ +W I+ SQ+ETGTPYML+KDSCNRKSNQ NLG
Sbjct: 365 CYGAEFDALYQKYEEEGRYVRRVHAQTMWRAIIESQVETGTPYMLYKDSCNRKSNQSNLG 424
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIK SNLCTEIVE++S +E AVCNLASIA+ ++V + GV +D
Sbjct: 425 TIKCSNLCTEIVEYTSKDEVAVCNLASIAVNKFVLQSGV-------------------YD 465
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
FE+L ++TKI+T NLN+ ID N YP+ + SNL++RPIGIG+QG+AD F+++ +P+ES
Sbjct: 466 FEKLKKITKIVTRNLNRTIDSNWYPLPEAKVSNLKNRPIGIGVQGMADAFVMMRMPYESV 525
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-NITPSDRWDW 600
A +LNK IFETIYY AL+AS ELA GPYETY GSP S+G+LQ DMW N+TPSD WDW
Sbjct: 526 AAAELNKKIFETIYYGALEASCELAAIYGPYETYEGSPASRGVLQYDMWDNVTPSDLWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S L+ ISK+G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL
Sbjct: 586 SMLKSKISKHGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+KDLT +GLW+ +K II+ NGSV +I IP E++ +YKTVWE+ +TL++MAADRG +
Sbjct: 646 VKDLTAIGLWNDTIKNLIIHNNGSVQRIESIPLEIRQLYKTVWEMSMRTLINMAADRGAF 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
IDQSQS N++M+ P +GKLTS+HFYAW G+KTGMYYLRT+ AA+AI+FTVD +
Sbjct: 706 IDQSQSFNVYMDLPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAANAIQFTVDKT 759
>gi|6969720|gb|AAF33932.1| TI4L [Vaccinia virus Tian Tan]
Length = 771
Score = 1030 bits (2664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/772 (62%), Positives = 601/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGFRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|88854118|gb|ABD52536.1| ribonucleotide reductase large subunit M1 [Vaccinia virus]
Length = 771
Score = 1030 bits (2663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/772 (62%), Positives = 602/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PS+ W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSNLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|358338264|dbj|GAA30040.2| ribonucleoside-diphosphate reductase subunit M1 [Clonorchis sinensis]
Length = 1065
Score = 1029 bits (2661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/841 (57%), Positives = 627/841 (74%), Gaps = 51/841 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV+KRDGR E V +KI+ R++ L YGL + D + ++V G+Y GVTT++LD LA
Sbjct: 241 IYVLKRDGRTEGVHCEKISKRIRALCYGLDESCIDIPAITRRVVTGLYPGVTTSELDNLA 300
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE A MT H Y LA R+AVSNLHK TK SFSE ++D+Y Y N+R+ + +++++V
Sbjct: 301 AEVCACMTTRHHAYGTLAARLAVSNLHKNTKASFSEAMEDLYGYVNERTKLHSPILSEEV 360
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+II +NA L+ AI Y RDF+++YFGFKTLERSYL K+ +V ERPQHMLMR SVGIHK
Sbjct: 361 IKIIRENADRLNSAIDYQRDFNYNYFGFKTLERSYLFKLHGKVHERPQHMLMRASVGIHK 420
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A++TY+LMS+ WFTHA+PTLFN+GT +PQ+SSCFL+ MKDDSIEGIYDTLK+CAI
Sbjct: 421 RDIDAAIETYNLMSEKWFTHASPTLFNSGTTRPQMSSCFLITMKDDSIEGIYDTLKECAI 480
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG++IHNIR++G+YI GTNG SNGIVPML+VFN+TARY+DQGG KR GAFA+Y
Sbjct: 481 ISKNAGGIGVNIHNIRSAGTYIAGTNGDSNGIVPMLRVFNNTARYIDQGGNKRPGAFAVY 540
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+ +F+++RKN G EE R RDLFYALW+PD+FM RV + W+L P + GL
Sbjct: 541 LEPWHPDVLQFIEMRKNTGAEEIRGRDLFYALWIPDIFMRRVEANEDWTLMDPHECPGLP 600
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY +YE EGR + + A+++W I+ +QIETGTP+ML+KD+CNRKSN Q+L
Sbjct: 601 DKWGEEFEALYLKYEAEGRGRRTLPAQEVWHSIIEAQIETGTPFMLYKDACNRKSNHQHL 660
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLCTEI+E+SSP+ETAVCNLASI+L +V D+K F
Sbjct: 661 GTIRCSNLCTEIIEYSSPDETAVCNLASISLGHFV------------------DAKEHTF 702
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L VT++IT NLN++ID + YP+E RRSN+RHRPIGIG+QGLAD F+LL PF+S
Sbjct: 703 DFDKLQYVTRVITRNLNRVIDNSFYPVEEARRSNMRHRPIGIGVQGLADAFLLLRYPFDS 762
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD---- 596
PEA LNK IFETIY+ AL AS +LA ++GP+ETY G P+SKGILQ DMW + +
Sbjct: 763 PEAAALNKRIFETIYFAALDASCDLAKEEGPFETYEGCPVSKGILQPDMWGVDTEELSKI 822
Query: 597 -RWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
DW+ LR+ I K GVRNSLL+APMPTAST+QILGNNE EP+TSN+Y+RRVLSGEF +
Sbjct: 823 SGLDWAGLRQRIKKYGVRNSLLLAPMPTASTAQILGNNESIEPFTSNVYSRRVLSGEFQI 882
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VN +L+ DL +LGLWS LK+ I+ GSV I IP+E+KA+YKT+WE+ Q+ ++DMAA
Sbjct: 883 VNPYLMDDLNKLGLWSEELKSAIVANQGSVQDIQGIPDEIKALYKTIWELSQRKIIDMAA 942
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD--- 772
DRG +IDQSQSLN+H+ QP++GK+TS+HFYAW KG+KTGMYYLRTR AAD IKFT+D
Sbjct: 943 DRGPFIDQSQSLNLHVAQPNYGKITSMHFYAWKKGLKTGMYYLRTRPAADPIKFTIDKTR 1002
Query: 773 ----------TSVLNNEKAN--------------RADNDVE-ANLAQVVCSLKNQEECMA 807
+V+N R +++ N+ + CSLKN E C++
Sbjct: 1003 VRALMERGVTVNVVNGTTGKGDAIDEQQEAEEEERIMKEIQRRNMEAITCSLKNPEGCLS 1062
Query: 808 C 808
C
Sbjct: 1063 C 1063
>gi|17974978|ref|NP_536492.1| I4L [Monkeypox virus Zaire-96-I-16]
gi|17529845|gb|AAL40523.1|AF380138_65 I4L [Monkeypox virus Zaire-96-I-16]
Length = 771
Score = 1029 bits (2661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/808 (60%), Positives = 611/808 (75%), Gaps = 39/808 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+A+SNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAISNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASG YI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGGYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + L
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPRLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +LA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCKLAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EHLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIAQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D +
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--- 756
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMAC 808
QVVC + E C +C
Sbjct: 757 ------------PQVVC---DSEICTSC 769
>gi|51342225|gb|AAU01269.1| MPXV-WRAIR059 [Monkeypox virus]
gi|58220529|gb|AAW67817.1| MPXV-SL-059 [Monkeypox virus]
gi|59858865|gb|AAX09160.1| MPXV-COP-059 [Monkeypox virus]
gi|68448741|gb|AAY96864.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
gi|68449343|gb|AAY97463.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
gi|68449543|gb|AAY97662.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
Length = 771
Score = 1028 bits (2659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/808 (60%), Positives = 612/808 (75%), Gaps = 39/808 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+A+SNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAISNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G +E R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNDEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKCIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS +LA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCKLAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D +
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--- 756
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMAC 808
QVVC + E C +C
Sbjct: 757 ------------PQVVC---DSEICTSC 769
>gi|1143665|emb|CAA53832.1| unnamed protein product [Variola virus]
gi|5830619|emb|CAB54658.1| L4L protein [Variola minor virus]
Length = 771
Score = 1028 bits (2658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/772 (62%), Positives = 599/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE +KD++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G IY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLA FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLAYAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|109724507|gb|ABG43631.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1027 bits (2656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/772 (62%), Positives = 598/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE +KD++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG+SNGI+PML+V+N+TARY+DQGG KR G IY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DD +WSL CP + GL
Sbjct: 301 LEPWHFDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDEEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVIDGQ--------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|170579939|ref|XP_001895047.1| ribonucleoside-diphosphate reductase large chain [Brugia malayi]
gi|158598142|gb|EDP36102.1| ribonucleoside-diphosphate reductase large chain, putative [Brugia
malayi]
Length = 1061
Score = 1027 bits (2655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/795 (60%), Positives = 606/795 (76%), Gaps = 28/795 (3%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV+KRDGR E V FDKI R+ KL YGLS++ D + ++QKV AG+YKGVTT +LD LAA
Sbjct: 12 YVVKRDGRHEAVSFDKIARRIMKLCYGLSQDRVDHIEISQKVIAGLYKGVTTVELDNLAA 71
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
E AA M HPDYA LA R+ VSNLHK T+ SFS+ + +YN + +SG+ L++ +++
Sbjct: 72 EIAADMITKHPDYATLASRITVSNLHKKTEKSFSKLSRRLYNATHPKSGRHMPLISKELF 131
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
+II NA LD AI+++RD+ + YFG KTLERSYLL+++ + ERPQHMLMRV++GIH +
Sbjct: 132 DIIQNNANLLDSAIVHERDYLYTYFGLKTLERSYLLQINGELAERPQHMLMRVALGIHGE 191
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D ++AL+TY+LMS+ WFTHATPTLFN+GT PQ+SSCFLL M +DSIEGI++TLKKCA+I
Sbjct: 192 DIEAALETYNLMSERWFTHATPTLFNSGTCTPQMSSCFLLTMFEDSIEGIFETLKKCALI 251
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKSAGGIGL++H IRASGS I GTNG SNG+VPML+VFN+ ARYVDQGG KR GAFA+YL
Sbjct: 252 SKSAGGIGLNVHCIRASGSAIAGTNGVSNGLVPMLRVFNNAARYVDQGGNKRPGAFAVYL 311
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHADIF+FL+LRKN G E R RDLF+ LWVPDLFMERVRDD WSL CP++ GL D
Sbjct: 312 EPWHADIFDFLELRKNVGDELERCRDLFFGLWVPDLFMERVRDDKIWSLMCPAECPGLED 371
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
SWG FE LY+QYEEEGR + + ARKLW I+ +QIETG PYM++KD+CNRK+NQQNLG
Sbjct: 372 SWGEAFEKLYTQYEEEGRYRKQVPARKLWETIVFTQIETGMPYMVYKDTCNRKTNQQNLG 431
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIK SNLCTE+V +SS EE AVCNLASIAL R+V + +D
Sbjct: 432 TIKCSNLCTEVVLYSSREEIAVCNLASIALGRFV-------------------TSEMKYD 472
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F+ L EVTK++ +NLNK+ID N+YPI RSN RHRPIGIG+QGLAD FIL+ PF S
Sbjct: 473 FKMLHEVTKVVVKNLNKVIDRNYYPIPEAERSNKRHRPIGIGVQGLADAFILMRYPFTSE 532
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
+A+ LNK IFETIYY AL+AS +LA + GPYE+Y GSP+SKGILQ DMW +TP+D+ DW
Sbjct: 533 KARDLNKRIFETIYYAALEASCDLAKEQGPYESYEGSPISKGILQFDMWGVTPTDQCDWG 592
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
+LRE I+K G+RNS+L++PMPTAST+QILGNNE EPYTSN+YTR VLSG F + N HL+
Sbjct: 593 TLREKIAKFGIRNSVLLSPMPTASTAQILGNNESIEPYTSNVYTRNVLSGSFQIFNMHLM 652
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
DL L LW +K +II GS+ I IP+E++ +Y+TVWE+ Q+ ++DMAADRG +I
Sbjct: 653 NDLMHLDLWDDDMKLEIIKNKGSIQNIERIPQEIRDLYRTVWEMSQRDIIDMAADRGAFI 712
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWS---------KGMKTGMYYLRTRAAADAIKFTVD 772
DQSQSLNI + +P++G +TS+HFY W KG+KTGMYYLRTR A DA++FTVD
Sbjct: 713 DQSQSLNIFIARPNYGNITSMHFYGWQKVCTAFLMYKGLKTGMYYLRTRPAVDAVQFTVD 772
Query: 773 TSVLNNEKANRADND 787
+ L + D +
Sbjct: 773 KTRLKEYDSVNGDKN 787
>gi|323098474|gb|ADX22712.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
Length = 771
Score = 1027 bits (2655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/808 (60%), Positives = 610/808 (75%), Gaps = 39/808 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+A+SNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAISNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YF FKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFXFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG R G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGXXRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +LA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCKLAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EHLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT A+ I+FT+D +
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTXPASAPIQFTLDKDKIK--- 756
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMAC 808
QVVC + E C +C
Sbjct: 757 ------------PQVVC---DSEICTSC 769
>gi|410075976|ref|XP_003955570.1| hypothetical protein KAFR_0B01360 [Kazachstania africana CBS 2517]
gi|372462153|emb|CCF56435.1| hypothetical protein KAFR_0B01360 [Kazachstania africana CBS 2517]
Length = 845
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/784 (60%), Positives = 616/784 (78%), Gaps = 15/784 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPVRFDKITAR+ +LSYGL E D V Q++ AG+Y+GV+T +LD LA
Sbjct: 1 MYVIKRDGRKEPVRFDKITARITRLSYGLDPERIDAAKVTQRIIAGIYEGVSTQELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDY+ LA R+A+SNLHK T FS+ + ++++Y N +GK A LV+ V
Sbjct: 61 AETCAYMTTIHPDYSTLAARLAISNLHKQTTKQFSQVVSNLHHYINPATGKHAPLVSKRV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+MKN L+ AI+YDRD++F+YFGFKTLERSYLL+++ +VVERPQH+LMRV++GIH
Sbjct: 121 YDIVMKNKDVLNSAIVYDRDYNFNYFGFKTLERSYLLRIEDKVVERPQHLLMRVALGIHM 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA+++Y+LMS +F HATPTLFNAGTP PQ+SSCFL+ MKDDSI+GI++TLK+CA+
Sbjct: 181 DDIESAIESYNLMSLKYFIHATPTLFNAGTPHPQMSSCFLVSMKDDSIDGIFETLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+ +H+IR S SYI GTNG + G++P++ +FN TAR+V QGG KR GA A +
Sbjct: 241 ISKSAGGIGVHVHDIRGSDSYIAGTNGKAKGMMPVVSIFNTTARFVTQGGNKRPGAIAFF 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+F+F+++RKN G EE RARDLF ALW+PDLFM+RV D+G+W+ F S+A GL+
Sbjct: 301 LEPWHPDVFKFIEMRKNHGDEEYRARDLFPALWIPDLFMKRVADNGQWTFFSSSEAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EGR K I A+KLW+ IL +Q ETGTP+M +KD+ N+KSNQ+NL
Sbjct: 361 DVYGDEFEELYERYEREGRGK-TIKAQKLWYAILEAQTETGTPFMCYKDAANQKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EI+E+S+PEETAVCNLASI LP ++ S D+K +
Sbjct: 420 GTIKSSNLCCEILEYSNPEETAVCNLASICLPTFIEY--------------SEDNKTSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L V K+IT NLN++ID N+YP+ +RSN+RHRPI +G+QGLADTF++L LPFES
Sbjct: 466 NFDKLHSVAKVITRNLNRVIDNNYYPVPEAKRSNMRHRPIALGVQGLADTFMMLRLPFES 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA +LNK IFETIY+ +L+AS ELA K+G YET+ GSP S+GILQ+DMWN P WDW
Sbjct: 526 DEATKLNKQIFETIYHASLEASCELAQKEGHYETFPGSPASQGILQMDMWNAEPFGMWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I K G+RNSL +APMPTASTSQI+G NECFEP TSN+Y RRVLSGEF +VN +L
Sbjct: 586 ETLRKDIVKYGIRNSLTMAPMPTASTSQIMGFNECFEPITSNMYQRRVLSGEFQIVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W ++K +I +NGS+ + +P+ELK +YKTVWEI QK ++DMAADR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIQNLPNVPDELKELYKTVWEISQKKILDMAADRSIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQS SLN+ + P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D SV +
Sbjct: 706 IDQSHSLNLFIRAPTMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQSVADQAA 765
Query: 781 ANRA 784
N A
Sbjct: 766 NNIA 769
>gi|374724342|gb|EHR76422.1| ribonucleoside-diphosphate reductase alpha chain [uncultured marine
group II euryarchaeote]
Length = 797
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/813 (58%), Positives = 615/813 (75%), Gaps = 21/813 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+ R G +E VRFD I +L+ L++GL DP V + G+Y GVTT +LD+LA
Sbjct: 3 MQVVNRKGEREDVRFDAIHEKLRSLTHGLDPVWVDPGHVTKLTIEGLYDGVTTRELDQLA 62
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++ HPDY+ LA R+ V +LH+ TK +F++ I D+ Y + S K A L++++V
Sbjct: 63 AETAASLASQHPDYSRLAARICVDDLHRSTKETFTDVITDLREYIDPESKKHAPLISEEV 122
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y IIM+NA L+ + Y RD ++DYFGFKTLERSYLL+++ + ERPQHMLMRV+VGIH
Sbjct: 123 YSIIMENAEVLNNHVNYSRDHNYDYFGFKTLERSYLLRLNGEIAERPQHMLMRVAVGIHH 182
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+ AL+TY LMSQ +FTHATPTLFN+GTP PQ+SSCFLL M+DDS++GIYDTLK+CA+
Sbjct: 183 GNITKALETYDLMSQGYFTHATPTLFNSGTPTPQMSSCFLLTMQDDSLDGIYDTLKQCAL 242
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLSIH+IR+ GSYI GTNG SNGIVPML+VFNDTARYVDQGGGKRKG+ AIY
Sbjct: 243 ISKSAGGIGLSIHHIRSKGSYIKGTNGESNGIVPMLRVFNDTARYVDQGGGKRKGSIAIY 302
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DI FLDL+KN GKEE RARDLFYALW PDLFMERV + WS FCP++ GL
Sbjct: 303 LEPWHPDILAFLDLKKNHGKEELRARDLFYALWTPDLFMERVEQNADWSFFCPNECPGLQ 362
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G +F+ LY +YE EG A+ + AR +W +++ SQIETGTPYML+KD+ N KSNQ+NL
Sbjct: 363 DAYGADFKALYEKYESEGLARETLPARTVWDKVVESQIETGTPYMLYKDAANEKSNQKNL 422
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI+E+++ +E AVCNLASIAL +YV D +N F
Sbjct: 423 GTIRSSNLCTEIMEYTAKDEVAVCNLASIALNKYV------------------DLENSTF 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ + L +VT T NLN++IDVN+YP+E R SN+RHRPIG+G+QGLADTF LL LPFES
Sbjct: 465 NHQLLYDVTYHATGNLNRVIDVNYYPVEEARNSNMRHRPIGLGVQGLADTFALLQLPFES 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
P+A+ LNK+IFETIY+ A AS + A+ +G Y T+ GSP SKG LQ D+W + S RWD
Sbjct: 525 PQARALNKEIFETIYFAACTASKDAAIAEGAYSTFQGSPASKGELQFDLWGMNDHSGRWD 584
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W++L+ I ++G+RNSLL+APMPTASTSQILGNNECFE +TSN+Y RR LSGEFIV+NKH
Sbjct: 585 WTTLKGEIIEHGMRNSLLLAPMPTASTSQILGNNECFEAFTSNLYVRRTLSGEFIVLNKH 644
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
L++DL L LWS +K +I+ GS+ I IPE +KA+YKT WEIKQ+ ++DMAADRG
Sbjct: 645 LVRDLIALDLWSLNMKDEILRHKGSIQAIEGIPEHIKALYKTTWEIKQRHVLDMAADRGA 704
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
Y+DQSQS+NIHM + K+TS+HFY W +G+KTGMYYLRT+AAADAI+FTV+ ++
Sbjct: 705 YVDQSQSMNIHMVDANPAKVTSMHFYGWKQGLKTGMYYLRTKAAADAIQFTVEAKKGEDQ 764
Query: 780 KANRADNDVE--ANLAQVVCSLKNQEECMACGS 810
+ E ++L + CSL ++C++CGS
Sbjct: 765 TVGGLADRAEEISSLEAIACSLDTPDDCLSCGS 797
>gi|443922933|gb|ELU42275.1| ribonucleoside-diphosphate reductase large chain [Rhizoctonia
solani AG-1 IA]
Length = 987
Score = 1025 bits (2650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/814 (60%), Positives = 611/814 (75%), Gaps = 46/814 (5%)
Query: 9 RKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMT 68
RKE V FDKITAR+ KL YGL + H DP+ V +KV AGVY GVTT +LD LA+ETAA +T
Sbjct: 74 RKERVAFDKITARITKLCYGLDRNHVDPIEVTKKVIAGVYAGVTTVELDNLASETAAYLT 133
Query: 69 VNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNA 128
HPDYA+LA R+A+SNLHK T+ +FS I D+YNY N ++G+ A +++ + YEI+ +NA
Sbjct: 134 TKHPDYAILAARIAISNLHKETRKNFSAVIADLYNYVNPKNGRPAGMISKETYEIVQENA 193
Query: 129 ACLDGAIIYDRDFDFDY-----------------FGFKTLERSYLLKMDSRVVERPQHML 171
A LD A+IY+RDF ++ FGFKTLERSYLL+++ RV ERPQHML
Sbjct: 194 AALDSAMIYERDFHYNLWGNFNLLIWYFTKTLISFGFKTLERSYLLRINGRVAERPQHML 253
Query: 172 MRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGI 231
MRV+VGIH + D A++TY+LMS+ +FTHA+PTLFNAGTP PQLSSCFL+ MKDDSI+GI
Sbjct: 254 MRVAVGIHGRNIDRAIETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVAMKDDSIDGI 313
Query: 232 YDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGG 291
YDTLK CA+ISK+AGGIGL IHNIRA+GSYI GTNG SNGIVPML+ ++ TARYVDQGG
Sbjct: 314 YDTLKTCAMISKTAGGIGLHIHNIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGN 373
Query: 292 KRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLF 351
KR GAFAIYLEPWHAD+FEFLDLRKN GKEE RARDLFYALW+PDLFM+R+ +DG W+LF
Sbjct: 374 KRPGAFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMQRIEEDGDWTLF 433
Query: 352 CPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSC 411
CP++A GLAD G F LY++YE+EGR + I A+KLW+ IL++QIETG P+ML+KD+
Sbjct: 434 CPNEAPGLADVHGAAFVELYTKYEKEGRGRKTIKAQKLWYAILDAQIETGGPFMLYKDAA 493
Query: 412 NRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRY-VREKGVPVQSNVSKLV 470
N KSNQQNLGTIKSSNLCTEI+E+S+P+E AVCNLASIALP + V + P
Sbjct: 494 NAKSNQQNLGTIKSSNLCTEIIEYSAPDEVAVCNLASIALPTFIVNDPAAP--------- 544
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
+ +DF++L EVTK++ NLN IIDVN+YP+ R SN+RHRPIGIG+QGLAD
Sbjct: 545 -----HGKRYDFKKLHEVTKVVANNLNTIIDVNYYPVPEARNSNMRHRPIGIGVQGLADA 599
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
F+ L +PFESPEA++LN IFETIY+ A++AS E+A GPY T+ GSP S+G LQ D+W
Sbjct: 600 FMCLKMPFESPEARELNLLIFETIYHAAVEASVEMAEAQGPYSTFQGSPASQGKLQFDLW 659
Query: 591 NITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLS 650
+TPS W+W L+ + + G+RNSLL+APMPTASTSQILG NECFEPYTSNIYTRRVL+
Sbjct: 660 GVTPSGLWEWEDLKAKVVRTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLA 719
Query: 651 GEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTL 710
GEF VV LL+DL LGLW +K II +GS+ I+ IP+++KAIYKTVWEI QKT+
Sbjct: 720 GEFQVVCPWLLRDLVSLGLWDDDMKNMII-ASGSIQNINGIPDDIKAIYKTVWEISQKTV 778
Query: 711 VDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFT 770
+++AADRG +I QSQSLN+H++ P+ +L + YLRTR AA AI+FT
Sbjct: 779 LNLAADRGAFICQSQSLNVHLQSPNARQLL--------PNLTRQFSYLRTRPAAQAIQFT 830
Query: 771 VDTSVLNNEKANRADNDV-----EANLAQVVCSL 799
VD SV+ A + EAN VV SL
Sbjct: 831 VDQSVIKQANAAKKAATATPIKPEANKEAVVSSL 864
>gi|195119233|ref|XP_002004136.1| GI18284 [Drosophila mojavensis]
gi|193914711|gb|EDW13578.1| GI18284 [Drosophila mojavensis]
Length = 771
Score = 1025 bits (2650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/790 (60%), Positives = 615/790 (77%), Gaps = 35/790 (4%)
Query: 37 VLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSE 96
V + KV G+Y GV+T +LD LAAE AA++T H DYALLA R+AVSNLHK TK FS+
Sbjct: 1 VSITLKVINGLYCGVSTQELDNLAAEIAASLTTLHADYALLAARIAVSNLHKETKKVFSD 60
Query: 97 TIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYL 156
+D++ + NK + + LV++ Y I+ N+ L+ AIIYDRDF ++YFGFKTLERSYL
Sbjct: 61 VFEDLFKHVNKETNLPSPLVSEYHYNIVKNNSDRLNSAIIYDRDFGYNYFGFKTLERSYL 120
Query: 157 LKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLS 216
LK++ ++ ERPQH+LMRV++GIH +D DSA++TY+L+S+ +FTHA+PTLF A T +PQLS
Sbjct: 121 LKINGKIAERPQHLLMRVAIGIHGEDIDSAVETYNLLSERFFTHASPTLFAAATNRPQLS 180
Query: 217 SCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPML 276
SCFLL + DSIEGI+ ++++CA+ISKSAGGIGL++H IRA G+ I GTNG+SNG+VPML
Sbjct: 181 SCFLLTIVSDSIEGIFKSVEQCAMISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPML 240
Query: 277 QVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPD 336
+VFN+ ARYVDQGGGKR GAFAIYLEPWH+D+FEFLDL+KN GKEE RARDLF+ALW+PD
Sbjct: 241 RVFNNVARYVDQGGGKRPGAFAIYLEPWHSDVFEFLDLKKNTGKEEHRARDLFFALWIPD 300
Query: 337 LFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNS 396
LFM+RV + WSL CP GL D WG +FE+LY +YE EGRA VI A+ LWF I+ S
Sbjct: 301 LFMKRVEANEDWSLMCPHKCPGLPDVWGEDFENLYIKYEREGRANRVIKAQSLWFAIIES 360
Query: 397 QIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVR 456
Q+ETGTPYMLFKDSCNRKSNQQN+GTIK SNLCTEIVE+S+P+E AVCNLASIAL +V
Sbjct: 361 QVETGTPYMLFKDSCNRKSNQQNVGTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV- 419
Query: 457 EKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLR 516
++ + +DF++L +VTKI+T+NLNKIID+N+YP+ ++SNLR
Sbjct: 420 ------------------TQEKSYDFKKLKDVTKIVTKNLNKIIDINYYPLPEAKKSNLR 461
Query: 517 HRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYF 576
HRPIGIG+QG AD IL+ +ES EA LN+ IFETIYY AL+AS ELA +DGPYETY
Sbjct: 462 HRPIGIGVQGFADALILMRYSYESREAFLLNQQIFETIYYGALEASCELAQRDGPYETYV 521
Query: 577 GSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
GSP+SKGILQ DMWN +P+D WDW++L++ I+++GVRNSLL+APMPTAST+QILGNNE F
Sbjct: 522 GSPVSKGILQYDMWNKSPTDLWDWNALKKSIAQHGVRNSLLIAPMPTASTAQILGNNESF 581
Query: 637 EPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELK 696
EPYTSNIYTRRVLSGEF VVN HLL+DLTEL LW +K +II GS+ I IP+E++
Sbjct: 582 EPYTSNIYTRRVLSGEFQVVNHHLLRDLTELDLWDDEMKNQIISSRGSIQNIESIPKEIR 641
Query: 697 AIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMY 756
+YKTVWEI K+ + MAADRG +IDQSQS NIH+ +P++GKLTS+HFY+W G+KTGMY
Sbjct: 642 DLYKTVWEISVKSTIKMAADRGAFIDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMY 701
Query: 757 YLRTRAAADAIKFTVDTSV----------------LNNEKANRADNDVEANLAQVVCSLK 800
YLRT+ AA+AI+FTV+ ++ L + + +D + E +A ++CSL+
Sbjct: 702 YLRTKPAANAIQFTVNKNISVLESNGHSSFEKNTSLEVDNPSESDIERERRMADMICSLE 761
Query: 801 NQEECMACGS 810
N++ C++CGS
Sbjct: 762 NKDACLSCGS 771
>gi|323098671|gb|ADX22908.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
Length = 771
Score = 1025 bits (2650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/808 (60%), Positives = 609/808 (75%), Gaps = 39/808 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+A+SNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAISNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YF FKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFXFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG R G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGXXRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD F LL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFXLLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +LA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCKLAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EHLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTXPASAPIQFTLDK------- 752
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMAC 808
+ QVVC + E C +C
Sbjct: 753 --------DKXXPQVVC---DSEICTSC 769
>gi|401395878|ref|XP_003879702.1| putative ribonucleoside-diphosphate reductase, large subunit
[Neospora caninum Liverpool]
gi|325114109|emb|CBZ49667.1| putative ribonucleoside-diphosphate reductase, large subunit
[Neospora caninum Liverpool]
Length = 886
Score = 1025 bits (2649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/804 (59%), Positives = 620/804 (77%), Gaps = 21/804 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+ R G +EPV FD+I R++KLS+GL DP VAQ V G+Y G+ T++LD+LA
Sbjct: 61 MYVVNRRGEEEPVSFDQILKRIEKLSFGL-HPLVDPARVAQAVINGMYAGIRTSELDDLA 119
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T+A M +HPD++ LA R+A+ NLHK T ++F I+ ++ Y +K G++A LV+ +V
Sbjct: 120 AQTSAYMAASHPDFSKLAARIAIDNLHKNTTDNFLTVIEQLHGYVDKL-GREAKLVSTEV 178
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE + N L+ A+ Y RDF++DYFGFKTLERSYLLK+ R+VERPQHMLMRV+ GIH
Sbjct: 179 YEFVKANEKALNEALNYSRDFEYDYFGFKTLERSYLLKIHDRIVERPQHMLMRVACGIHC 238
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+ + A++TY LMSQ +FTHATPTLFNAGTP+PQ+SSCFLL M++DSI+GI+ TLK+CA+
Sbjct: 239 GNVERAVETYELMSQKFFTHATPTLFNAGTPRPQMSSCFLLTMQEDSIDGIFSTLKQCAL 298
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+GL++ +IRA+ SYI GTNG SNG++PML+VFND ARYVDQGGGKRKG+ AIY
Sbjct: 299 ISKTAGGLGLAVTDIRATNSYIRGTNGYSNGLLPMLRVFNDAARYVDQGGGKRKGSLAIY 358
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+F+FLD++KN GKEE RARDLF ALW+PDLFMERV D+ W+L CP++ GL
Sbjct: 359 LEPWHFDVFDFLDIKKNHGKEERRARDLFCALWIPDLFMERVNDNAGWTLMCPNECPGLT 418
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EF+ LY +YE EGR + I A+ LWF IL +QIETGTPYML+KD+CNRKSNQ+NL
Sbjct: 419 EVWGEEFKELYERYEREGRGRKTIPAQHLWFAILQAQIETGTPYMLYKDACNRKSNQKNL 478
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTE+VE++S +E AVCNLAS++LP++V D + R F
Sbjct: 479 GTIKCSNLCTEVVEYTSKDEVAVCNLASVSLPKFV------------------DRETRTF 520
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+E L ++ K++T NLN++ID N+YP+ + SNLRHRP+G+G+QGLAD F+LL PF+S
Sbjct: 521 DYEHLKKIVKVMTRNLNRVIDRNYYPVPEAKNSNLRHRPVGLGVQGLADAFMLLRYPFDS 580
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW-D 599
PEA+ LN++IFE IYY AL+AS ELA ++GPY TY GSPMS+GILQ DMW +TPS D
Sbjct: 581 PEARLLNRNIFECIYYAALEASCELAAEEGPYATYEGSPMSQGILQFDMWGVTPSSGLCD 640
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
WS+LRE I K+GVRNSLLV+PMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 641 WSALREKIKKHGVRNSLLVSPMPTASTSQILGNNEAFEPYTSNIYYRRVLSGEFFVVNPH 700
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL+DL E LWS +K ++I NG V + IP++LKA+YKTVWEIKQ+ ++D+A DR
Sbjct: 701 LLRDLLERDLWSEDVKQQLIAHNGCVLNMDVIPDDLKALYKTVWEIKQRVVLDLAIDRSP 760
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YIDQS SLNIHM P + KL+++HFY W G+KTG+YYLRT+AAADAIKFTVD+ + +
Sbjct: 761 YIDQSHSLNIHMVNPTYAKLSTMHFYGWRGGLKTGLYYLRTQAAADAIKFTVDSQLAMSA 820
Query: 780 KANRADNDVEANLAQVVCSLKNQE 803
KA + + L S ++E
Sbjct: 821 KAKLSGSTFSGVLTTTTSSAADEE 844
>gi|397567645|gb|EJK45703.1| hypothetical protein THAOC_35666, partial [Thalassiosira oceanica]
Length = 872
Score = 1023 bits (2645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/797 (60%), Positives = 612/797 (76%), Gaps = 36/797 (4%)
Query: 37 VLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFS- 95
+++QKV GVY GVTT +LDELAA+TAA+ HPDYA+LA R+ VSNLHK T+ FS
Sbjct: 89 AVISQKVIQGVYPGVTTVELDELAAQTAASFATQHPDYAVLAARIEVSNLHKETEKQFSK 148
Query: 96 ----ETIKDMY-NYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKT 150
E D + NY + ++G+ A LV+++V+ ++M N LDGAI++DRDF+FDYFGFKT
Sbjct: 149 VRPTEICGDCFRNYTHPKTGEPAPLVSEEVHSVVMANRDVLDGAILHDRDFEFDYFGFKT 208
Query: 151 LERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGT 210
LE+SYLLKM ++ ERPQH+LMRV+VGIH D + L+TY+L+SQ +FTHATPTLFNAGT
Sbjct: 209 LEKSYLLKMHGQIAERPQHLLMRVAVGIHMGDIERVLETYNLLSQRFFTHATPTLFNAGT 268
Query: 211 PQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSN 270
P PQ+SSCFL C+++DSI+GIYDTLK CA+ISK AGGIGLSI N+RAS SYI GTNG+SN
Sbjct: 269 PNPQMSSCFLTCVREDSIDGIYDTLKNCAVISKYAGGIGLSISNVRASASYIRGTNGTSN 328
Query: 271 GIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFY 330
GIVPML+VFN+TARYVDQGGGKRKG+ A Y+EPWHADIF FLDLRKN G E RARDLFY
Sbjct: 329 GIVPMLRVFNNTARYVDQGGGKRKGSIAAYIEPWHADIFAFLDLRKNHGNEMERARDLFY 388
Query: 331 ALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLW 390
ALW+PDLFMERV+ +G W+L CP++ GL WG EF+ LY +YE EG+ + I A++LW
Sbjct: 389 ALWIPDLFMERVQTNGDWTLMCPNECKGLDTCWGAEFKALYEKYEAEGKGRKTIKAQQLW 448
Query: 391 FEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIA 450
F IL+SQ+ETGTPYML+KD CN KSNQQNLGTIK SNLCTEIVE++ P+E AVCNLASI+
Sbjct: 449 FAILDSQVETGTPYMLYKDHCNGKSNQQNLGTIKCSNLCTEIVEYTCPDEIAVCNLASIS 508
Query: 451 LPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETT 510
L ++V P G S FD ++L ++K++T+NLN++ID N YP+E
Sbjct: 509 LSKFV----TPADG-----FGGDAS----FDLDQLMYISKVVTKNLNRVIDNNFYPVEEA 555
Query: 511 RRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDG 570
RRSN RHRPIGIG+QGLAD F ++ LPFES +A++LNKDIFETIY+ A +AS ELA +G
Sbjct: 556 RRSNTRHRPIGIGVQGLADAFQMMKLPFESEQARKLNKDIFETIYFGACEASMELAEAEG 615
Query: 571 PYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQIL 630
YET+ GSP S+G LQ DMW +TPSDRWDW+ L+E I+++G+RNSLL+APMPTAST+QIL
Sbjct: 616 HYETFPGSPASEGRLQFDMWGVTPSDRWDWAGLKEKIARHGMRNSLLMAPMPTASTAQIL 675
Query: 631 GNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISE 690
GNNE EP+TSN+Y RRVL+GEF VVNKHLL+DLT G W+ ++ KII + GS+ + E
Sbjct: 676 GNNESTEPFTSNMYNRRVLAGEFTVVNKHLLRDLTANGYWTERVRNKIIADGGSIQNVQE 735
Query: 691 IPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKG 750
+P+E++ IYKTVWEI Q+ ++DMAADRG +I QSQS+N+H+ +P+ KLTS+HFYAW KG
Sbjct: 736 LPKEIRDIYKTVWEIPQRAILDMAADRGAFICQSQSMNVHIGEPNTSKLTSMHFYAWKKG 795
Query: 751 MKTGMYYLRTRAAADAIKFTVDTSVL---NNE------KANRADNDVEANLAQVVCSLK- 800
+KTGMYYLRTR ADAI+FTV+ +L NN K + ANL + + K
Sbjct: 796 LKTGMYYLRTRPKADAIQFTVNQEMLAETNNAAEKGKMKKAESPTSASANLDKPTVASKF 855
Query: 801 -------NQEECMACGS 810
++EEC+ CG+
Sbjct: 856 AGLQMKDDEEECLNCGA 872
>gi|156083304|ref|XP_001609136.1| ribonucleoside-diphosphate reductase large chain [Babesia bovis
T2Bo]
gi|154796386|gb|EDO05568.1| ribonucleoside-diphosphate reductase large chain [Babesia bovis]
Length = 838
Score = 1023 bits (2644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/791 (61%), Positives = 598/791 (75%), Gaps = 21/791 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VI R G E V FD+I R++KLS+GL D V Q V G+Y G+ T+QLDELA
Sbjct: 28 MFVINRKGESEEVHFDRILERIRKLSFGL-HSLVDAPRVTQSVINGMYSGIRTSQLDELA 86
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T A M HPDY+ LA R+ V NLHK T +++++ I ++ Y ASL++++V
Sbjct: 87 AQTCAYMAATHPDYSKLAARIVVDNLHKNTLDNYADVITALFKY-KYIYDSNASLISEEV 145
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ IM N ++ I Y RDF +DYFG KTLERSYLL+++ ++VERPQHMLMRVS GIH
Sbjct: 146 YDFIMANIDRINAEIDYSRDFQYDYFGLKTLERSYLLRINDKIVERPQHMLMRVSAGIHT 205
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D + ++TYHLMSQ +FTHATPTLF +GTP+PQ+SSCFLL MKDDS+ GI++TL +CA
Sbjct: 206 GDIERTIQTYHLMSQKYFTHATPTLFFSGTPRPQMSSCFLLDMKDDSLAGIFETLTQCAF 265
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL+ H IRASG+YI GTNG SNG+VPML++FN TARYVDQGGGKRKG+FAIY
Sbjct: 266 ISKCAGGIGLACHKIRASGAYIRGTNGKSNGLVPMLRIFNSTARYVDQGGGKRKGSFAIY 325
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI +FLDLRKN G EE RARDLFYALW+PDLFM+RV +G W+L CP + GL
Sbjct: 326 LEPWHADIMDFLDLRKNHGAEEARARDLFYALWIPDLFMKRVESNGDWTLMCPDECRGLY 385
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY++YE EG + I A+ LWF IL SQIETG P+ML+KD+CN KSNQQNL
Sbjct: 386 DVWGDEFEALYTKYEMEGLGRKTIPAQTLWFAILQSQIETGNPFMLYKDACNAKSNQQNL 445
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIV+++SPEE AVCNLASIALP YV D +N+ +
Sbjct: 446 GTIKSSNLCCEIVQYTSPEEVAVCNLASIALPMYV------------------DKENKTY 487
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +V ++IT NLNK+ID N+YP+ + SN RHRPIG+G+QGLADTF+L+ PFES
Sbjct: 488 DFKKLYDVARVITYNLNKVIDRNYYPVPEAKVSNHRHRPIGVGVQGLADTFMLMRYPFES 547
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-WD 599
EA++LN+ IFETIYY L S LA K G YE+Y GSP S+G LQ D+W T ++ WD
Sbjct: 548 EEAKELNRRIFETIYYGCLDESISLAEKYGTYESYPGSPASQGKLQFDLWGATVDNKLWD 607
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L++ ++K+G+RNSL +APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 608 WDGLKQRMAKHGLRNSLFLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 667
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL+DL +LGLW A+K K+I NGS+ I IP+ +K +YKTVWEIKQK+++DMAADRG
Sbjct: 668 LLRDLVDLGLWDDAMKEKLIAYNGSLRHIEGIPQHIKDLYKTVWEIKQKSIIDMAADRGI 727
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
+IDQSQSLNI+++QP GKLTS+HFY W KG+KTG YYLRT+AA DAIKFTVDTSV
Sbjct: 728 FIDQSQSLNIYLDQPTFGKLTSMHFYGWKKGLKTGTYYLRTQAATDAIKFTVDTSVSQMA 787
Query: 780 KANRADNDVEA 790
KA +A
Sbjct: 788 KATSQQQRAKA 798
>gi|373447978|gb|AEY73361.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 769
Score = 1022 bits (2643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/772 (62%), Positives = 600/772 (77%), Gaps = 23/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFET Y AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDLNKKIFET--YGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 578
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 579 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 638
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 639 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 697
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 698 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 749
>gi|428671726|gb|EKX72641.1| ribonucleoside-diphosphate reductase large chain, putative [Babesia
equi]
Length = 857
Score = 1022 bits (2643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/832 (59%), Positives = 612/832 (73%), Gaps = 47/832 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVI R G KE V FD+I R++KLS GL D V Q V G+Y G+ T+QLDELA
Sbjct: 47 MYVINRRGEKEDVSFDRILNRIRKLSAGL-HSLVDAPRVTQSVINGMYTGIHTSQLDELA 105
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNY---YNKRSGKKASLVA 117
A+T A M V HPDY+ LA + V NLHK T + FSE ++ +Y Y YN AS+++
Sbjct: 106 AQTCAYMAVTHPDYSRLAANITVDNLHKNTSDDFSEVVRTLYEYKHVYNT----NASMIS 161
Query: 118 DDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
DVY IM+N L+ I Y RDF +DYFGFKTLERSYLL+ ++++VERPQHMLMRVS G
Sbjct: 162 YDVYNFIMENKDRLNAEIDYSRDFQYDYFGFKTLERSYLLRANNKIVERPQHMLMRVSAG 221
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
IH D + ++TYHLMSQ +FTHATPTLFN+GT +PQ+SSCFLL M+DDS+ GI++TL +
Sbjct: 222 IHCGDVERTVETYHLMSQKFFTHATPTLFNSGTNRPQMSSCFLLDMQDDSLAGIFNTLTQ 281
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
CA ISKSAGGIGL+IH IRASGSYI GTNG SNGIVPML++FN TA+YVDQGGGKR+G+F
Sbjct: 282 CAFISKSAGGIGLAIHKIRASGSYIRGTNGQSNGIVPMLRIFNTTAKYVDQGGGKRRGSF 341
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
AIYLEPWHADIF+ LDLRKN G E+ RARDLFYALW+PDLFM+RV + W+L CP +
Sbjct: 342 AIYLEPWHADIFKMLDLRKNHGSEDLRARDLFYALWIPDLFMKRVEANENWTLMCPDECR 401
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
GL + WG EFE LY++YE+ G + I A+KLWF IL SQIETGTPYML+KD+CN KSNQ
Sbjct: 402 GLYEVWGDEFEALYTKYEQAGMGRKTIPAQKLWFAILQSQIETGTPYMLYKDACNAKSNQ 461
Query: 418 QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKN 477
+NLGTIKSSNLC EIV+++ +E AVCNLASIALP +V + +
Sbjct: 462 KNLGTIKSSNLCCEIVQYTDSKEVAVCNLASIALPMFV------------------NKEE 503
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
+ FDF++L ++ ++IT NLN+IID N+YP++ R SN RHRPIG+G+QGLADTF+LL P
Sbjct: 504 KTFDFKKLYKIARVITYNLNQIIDRNYYPVKEARYSNFRHRPIGVGVQGLADTFMLLRYP 563
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR 597
FES EA++LNK IFETIYY L S LA K G YE+Y GSP S+G+LQ D+W ++
Sbjct: 564 FESDEARELNKRIFETIYYACLDESISLAEKHGHYESYPGSPASQGLLQFDLWGAKVDNK 623
Query: 598 -WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVV 656
WDW L+ + K+G+RNSL +APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VV
Sbjct: 624 LWDWDDLKARMKKHGLRNSLFLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVV 683
Query: 657 NKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAAD 716
N HLL DL +LGLW+ +K K+I NGS+ I EIP+ +K +YKTVWEIKQKT++DMAAD
Sbjct: 684 NPHLLNDLVDLGLWNETMKQKLIAYNGSLRHIEEIPQHIKELYKTVWEIKQKTIIDMAAD 743
Query: 717 RGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
RG +IDQSQSLNI+MEQP KLTS+HFY W KG+KTG+YYLRT+ A DAIKFT+D+++
Sbjct: 744 RGIFIDQSQSLNIYMEQPTFSKLTSMHFYGWKKGLKTGVYYLRTQPATDAIKFTIDSNIA 803
Query: 777 NNEKA-NRADNDVEANL---------------AQVVCSLKN----QEECMAC 808
KA N+ D++ ++ A VC+L+ E C C
Sbjct: 804 QAAKAKNKLSTDMQPSMPTTTDVTSVATDEAPAFQVCNLRTSNNPNEPCFMC 855
>gi|237841871|ref|XP_002370233.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Toxoplasma gondii ME49]
gi|211967897|gb|EEB03093.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Toxoplasma gondii ME49]
gi|221482702|gb|EEE21040.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Toxoplasma gondii GT1]
gi|221503104|gb|EEE28810.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Toxoplasma gondii VEG]
Length = 877
Score = 1021 bits (2639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/791 (60%), Positives = 615/791 (77%), Gaps = 21/791 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+ R G +EPV FD+I R++KLS+GL DP VAQ V G+Y G+ T++LD+LA
Sbjct: 60 MYVVNRRGEEEPVSFDQILKRIEKLSFGL-HPLVDPARVAQAVINGMYAGIRTSELDDLA 118
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T+A M +HPD++ LA R+A+ NLHK T ++F I ++ Y +K G++A LV+ +V
Sbjct: 119 AQTSAYMAASHPDFSRLAARIAIDNLHKNTTDNFLTVIDQLHGYVDKL-GREAKLVSTEV 177
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE + +N L+ A+ Y RDFD+DYFGFKTLERSYLLK+ R+VERPQHMLMRV+ GIH
Sbjct: 178 YEFVRENEQALNEALNYSRDFDYDYFGFKTLERSYLLKIHDRIVERPQHMLMRVACGIHC 237
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D + A++TY LMSQ +FTHATPTLFNAGTP+PQ+SSCFLL M++DSI+GI+ TLK+CA+
Sbjct: 238 GDVEKAIETYELMSQKFFTHATPTLFNAGTPRPQMSSCFLLTMQEDSIDGIFSTLKQCAL 297
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+GL++ +IRA+ SYI GTNG SNG++PML+VFND ARYVDQGGGKRKG+ AIY
Sbjct: 298 ISKTAGGLGLAVTDIRATNSYIRGTNGYSNGLLPMLRVFNDAARYVDQGGGKRKGSLAIY 357
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+F+FLD++KN GKEE RARDLF ALW+PDLFMERV D+ W+L CP++ GL
Sbjct: 358 LEPWHFDVFDFLDIKKNHGKEERRARDLFCALWIPDLFMERVNDNAGWTLMCPNECPGLT 417
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EF+ LY +YE EGR + I A+ LWF IL +QIETGTPYML+KD+CNRKSNQ+NL
Sbjct: 418 EVWGDEFKELYERYEREGRGRKTIPAQHLWFAILQAQIETGTPYMLYKDACNRKSNQKNL 477
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTE+VE++S +E AVCNLAS++LP++V D ++R F
Sbjct: 478 GTIKCSNLCTEVVEYTSKDEVAVCNLASVSLPKFV------------------DRESRTF 519
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+E L + K++T NLN++ID N+YP+ ++SNLRHRP+G+G+QGLAD F+LL PF+S
Sbjct: 520 DYEHLKRIVKVMTRNLNRVIDRNYYPVPEAKKSNLRHRPVGLGVQGLADAFMLLRYPFDS 579
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW-D 599
PEA+ LN++IFE IY+ AL+AS ELA ++GPY TY GSP+S+GILQ DMW +TPS D
Sbjct: 580 PEARVLNRNIFECIYFAALEASCELAAEEGPYATYEGSPVSQGILQFDMWGVTPSSGLCD 639
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W LRE I +GVRNSLLV+PMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 640 WDGLREKIKAHGVRNSLLVSPMPTASTSQILGNNEAFEPYTSNIYYRRVLSGEFFVVNPH 699
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL+DL E LWS +K ++I NGSV + IP++LKA+YKTVWEIKQ+ ++D+A DR
Sbjct: 700 LLRDLLERDLWSEDVKQQLIAHNGSVQNMDVIPDDLKALYKTVWEIKQRVVLDLAIDRAP 759
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
+IDQS SLNIHM P + KL+++HFY W G+KTG+YYLRT+AAADAIKFTVD+ + +
Sbjct: 760 FIDQSHSLNIHMVNPTYAKLSTMHFYGWRGGLKTGLYYLRTQAAADAIKFTVDSQLAMSA 819
Query: 780 KANRADNDVEA 790
KA + V A
Sbjct: 820 KAKLSGATVGA 830
>gi|95007128|emb|CAJ20349.1| ribonucleoside-diphosphate reductase, large chain [Toxoplasma
gondii RH]
Length = 855
Score = 1020 bits (2637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/791 (60%), Positives = 615/791 (77%), Gaps = 21/791 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+ R G +EPV FD+I R++KLS+GL DP VAQ V G+Y G+ T++LD+LA
Sbjct: 38 MYVVNRRGEEEPVSFDQILKRIEKLSFGL-HPLVDPARVAQAVINGMYAGIRTSELDDLA 96
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T+A M +HPD++ LA R+A+ NLHK T ++F I ++ Y +K G++A LV+ +V
Sbjct: 97 AQTSAYMAASHPDFSRLAARIAIDNLHKNTTDNFLTVIDQLHGYVDKL-GREAKLVSTEV 155
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE + +N L+ A+ Y RDFD+DYFGFKTLERSYLLK+ R+VERPQHMLMRV+ GIH
Sbjct: 156 YEFVRENEQALNEALNYSRDFDYDYFGFKTLERSYLLKIHDRIVERPQHMLMRVACGIHC 215
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D + A++TY LMSQ +FTHATPTLFNAGTP+PQ+SSCFLL M++DSI+GI+ TLK+CA+
Sbjct: 216 GDVEKAIETYELMSQKFFTHATPTLFNAGTPRPQMSSCFLLTMQEDSIDGIFSTLKQCAL 275
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+GL++ +IRA+ SYI GTNG SNG++PML+VFND ARYVDQGGGKRKG+ AIY
Sbjct: 276 ISKTAGGLGLAVTDIRATNSYIRGTNGYSNGLLPMLRVFNDAARYVDQGGGKRKGSLAIY 335
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+F+FLD++KN GKEE RARDLF ALW+PDLFMERV D+ W+L CP++ GL
Sbjct: 336 LEPWHFDVFDFLDIKKNHGKEERRARDLFCALWIPDLFMERVNDNAGWTLMCPNECPGLT 395
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EF+ LY +YE EGR + I A+ LWF IL +QIETGTPYML+KD+CNRKSNQ+NL
Sbjct: 396 EVWGDEFKELYERYEREGRGRKTIPAQHLWFAILQAQIETGTPYMLYKDACNRKSNQKNL 455
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTE+VE++S +E AVCNLAS++LP++V D ++R F
Sbjct: 456 GTIKCSNLCTEVVEYTSKDEVAVCNLASVSLPKFV------------------DRESRTF 497
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+E L + K++T NLN++ID N+YP+ ++SNLRHRP+G+G+QGLAD F+LL PF+S
Sbjct: 498 DYEHLKRIVKVMTRNLNRVIDRNYYPVPEAKKSNLRHRPVGLGVQGLADAFMLLRYPFDS 557
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW-D 599
PEA+ LN++IFE IY+ AL+AS ELA ++GPY TY GSP+S+GILQ DMW +TPS D
Sbjct: 558 PEARVLNRNIFECIYFAALEASCELAAEEGPYATYEGSPVSQGILQFDMWGVTPSSGLCD 617
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W LRE I +GVRNSLLV+PMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 618 WDGLREKIKAHGVRNSLLVSPMPTASTSQILGNNEAFEPYTSNIYYRRVLSGEFFVVNPH 677
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL+DL E LWS +K ++I NGSV + IP++LKA+YKTVWEIKQ+ ++D+A DR
Sbjct: 678 LLRDLLERDLWSEDVKQQLIAHNGSVQNMDVIPDDLKALYKTVWEIKQRVVLDLAIDRAP 737
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
+IDQS SLNIHM P + KL+++HFY W G+KTG+YYLRT+AAADAIKFTVD+ + +
Sbjct: 738 FIDQSHSLNIHMVNPTYAKLSTMHFYGWRGGLKTGLYYLRTQAAADAIKFTVDSQLAMSA 797
Query: 780 KANRADNDVEA 790
KA + V A
Sbjct: 798 KAKLSGATVGA 808
>gi|334327874|ref|XP_001363871.2| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Monodelphis domestica]
Length = 755
Score = 1020 bits (2637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/813 (60%), Positives = 612/813 (75%), Gaps = 61/813 (7%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ E DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMEFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N + K + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPYNSKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDVVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 DDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+FEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV ++ WSL CP++ GL
Sbjct: 301 LEPWHLDVFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVENNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 DVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMFV-------------------TLEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK+I NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEASLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS ELA + GPYETY GSP+SKGILQ DMWN+ P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDW 581
Query: 601 SSLREMISK---NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
L+E I+K G+RN +VN
Sbjct: 582 KVLKEKIAKYLDGGIRNE---------------------------------------IVN 602
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
HLLKDLTE GLW+ +K +II NGS+ I EIPE+LK +YKTVWEI QKT++ MAADR
Sbjct: 603 PHLLKDLTERGLWNEEMKNQIIACNGSIQSIPEIPEDLKQLYKTVWEISQKTVLKMAADR 662
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L
Sbjct: 663 GAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLK 722
Query: 778 NEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
++ D + E N A +VCSL+N++EC+ CGS
Sbjct: 723 EKEKVLKDEEKERNTAAMVCSLENRDECLMCGS 755
>gi|403222932|dbj|BAM41063.1| ribonucleoside-diphosphate reductase large chain [Theileria
orientalis strain Shintoku]
Length = 877
Score = 1019 bits (2636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/785 (61%), Positives = 596/785 (75%), Gaps = 22/785 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVI R G KE V FDKI R++KLS GL D V Q V G+Y G+ T++LDELA
Sbjct: 50 MYVINRHGEKEDVSFDKILNRIRKLSLGL-HALVDAPRVTQSVINGMYTGIRTSELDELA 108
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T A M V HPDY+ LA + + NLHK T + F+E ++ ++ Y + ASL+++DV
Sbjct: 109 AQTCAYMAVTHPDYSRLAANITIDNLHKNTSSDFAEVVRTLFEYKHVYDSN-ASLISEDV 167
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y +M + + I Y RDF +DYFGFKTLERSYLLK + ++VERPQHMLMRVS GIH
Sbjct: 168 YNFVMMHKDRFNAEIDYSRDFQYDYFGFKTLERSYLLKANGKIVERPQHMLMRVSAGIHC 227
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D + L+TYHLMSQ +FTHATPTLFN+GT PQ+SSCFLL M+DDS+ GI++TL +CA
Sbjct: 228 GDIERTLQTYHLMSQRYFTHATPTLFNSGTRHPQMSSCFLLDMQDDSLAGIFNTLSQCAF 287
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGLSIH IRASGSYI GTNG SNGIVPML++FN TA+YVDQGGGKRKG+FAIY
Sbjct: 288 ISKSAGGIGLSIHKIRASGSYIRGTNGISNGIVPMLKIFNATAKYVDQGGGKRKGSFAIY 347
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+ LDLRKN G E+ RARDLFYALW+PDLFM+RV ++ W+L CP + GL
Sbjct: 348 LEPWHADIFKLLDLRKNHGSEDLRARDLFYALWIPDLFMKRVEENKNWTLMCPDECRGLY 407
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE++G K + A+KLWF IL SQIETGTPYML+KD+CN KSNQQNL
Sbjct: 408 EVWGEEFEKLYTHYEQQGMGKKTVPAQKLWFAILQSQIETGTPYMLYKDACNAKSNQQNL 467
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIV+++S +E AVCNLAS+ALP++V D + + F
Sbjct: 468 GTIKSSNLCCEIVQYTSKDEVAVCNLASVALPKFV------------------DKEKKTF 509
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L ++ ++IT NLN++ID N+YP+ R SN +HRP+G+G+QGLADTF+L+ PFES
Sbjct: 510 DFKKLYDICRVITYNLNQVIDRNYYPVREARVSNFKHRPMGVGVQGLADTFMLMRYPFES 569
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-WD 599
EA++LN+ IFET+YY L S +LA + G YE+Y GSP SKG+LQ D+W ++ WD
Sbjct: 570 EEARELNRRIFETMYYACLSESIDLARQYGTYESYPGSPASKGLLQFDLWGAKVDNKYWD 629
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L++ ++K G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVL GEF VVN H
Sbjct: 630 WDLLKQNLAKYGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLCGEFFVVNPH 689
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL DL ELGLW+ +K K+I NGS+ I E+P+ +K +YKTVWEIKQK ++DMAADRG
Sbjct: 690 LLNDLIELGLWNENMKQKLIAYNGSLKYIDEVPQHIKDLYKTVWEIKQKHIIDMAADRGV 749
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
+IDQSQSLNIHMEQP KLTS+HFY W KG+KTG+YYLRT+ A DAIKFTVD SV
Sbjct: 750 FIDQSQSLNIHMEQPTFSKLTSMHFYGWKKGLKTGVYYLRTQPATDAIKFTVDASVSQLA 809
Query: 780 KANRA 784
K NRA
Sbjct: 810 K-NRA 813
>gi|345107240|ref|YP_004821405.1| ribonucleotide reductase large subunit [Yoka poxvirus]
gi|344267314|gb|AEN03641.1| ribonucleotide reductase large subunit [Yoka poxvirus]
Length = 761
Score = 1019 bits (2635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/782 (61%), Positives = 601/782 (76%), Gaps = 30/782 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGRKE + FDKIT+R+KKL YGL +H DPV +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRDGRKENIMFDKITSRIKKLCYGLDMDHIDPVNIAMKVIQGIYTGVTTKELDILA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE ++ T HPDYA+LA R+++SNLHK TK FS+ ++D+Y K S+++ +V
Sbjct: 61 AEISSTCTTIHPDYAILAARISISNLHKETKKIFSDVVEDLY---------KESIISKNV 111
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ K+ ++ +II D DF ++YFGFKTLE+SYLLK+++++VERPQ+MLMRVS+GIH+
Sbjct: 112 MDVVYKHKERINSSIINDNDFSYNYFGFKTLEKSYLLKINNKIVERPQYMLMRVSIGIHQ 171
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DS ++TY L+S+ WF HA+PTLFN+GT PQ+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 172 WDIDSVIETYKLLSEKWFIHASPTLFNSGTCHPQMSSCFLLNMIDDSIEGIYDTLKRCAL 231
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+SI NIRASGSYI GTNG SNGIVPML+V+N+TARY+DQGG KR G AIY
Sbjct: 232 ISKMAGGIGISISNIRASGSYISGTNGISNGIVPMLRVYNNTARYIDQGGNKRPGVMAIY 291
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI +FL+L++N G EE R RDLF ALW+PD+FM RV++D WSL CP++ GL
Sbjct: 292 LEPWHADIMDFLELKRNSGNEELRTRDLFIALWIPDIFMTRVKNDEDWSLMCPNECPGLD 351
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ +G EFE LY++YE + +A+ VI AR +W I+ SQIETGTP+ML+KD+CN+K+N QNL
Sbjct: 352 NVYGDEFEKLYTKYEHDNKARAVIKARTVWKSIIESQIETGTPFMLYKDACNKKNNHQNL 411
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK NLC EI+++++P E AVCNLASIAL R+V N F
Sbjct: 412 GTIKCGNLCAEIIQYTNPNEVAVCNLASIALNRFV--------------------INNKF 451
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L E+ KII NLNKIID+N YP+ SN HRPIGIG+QGLADTFILL PFES
Sbjct: 452 DFNKLREIVKIIVRNLNKIIDINKYPLPEAEFSNKTHRPIGIGVQGLADTFILLNYPFES 511
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN IFETIYY AL+AS ELA GPY+TY GSP+SKGILQ D WN+ PSD WDW
Sbjct: 512 SEARNLNIKIFETIYYSALEASCELAKLYGPYKTYNGSPISKGILQYDFWNVVPSDLWDW 571
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I K GVRNSLLVA MPTAST+QI GNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 572 KLLKKKIQKYGVRNSLLVASMPTASTAQIFGNNESIEPYTSNIYSRRVLSGEFQIVNPHL 631
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LK LTE LWS+ LK KII ENG + + +PE++K IYKTVWEI Q+ ++DMAADRG +
Sbjct: 632 LKTLTERKLWSNELKNKII-ENGGSIQNTNLPEDIKQIYKTVWEIPQRVILDMAADRGAF 690
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P + KLTS+HFY WS G+KTGMYYLRT++A++ IKFTV+ L+N+
Sbjct: 691 IDQSQSLNIHISEPSYSKLTSMHFYGWSLGLKTGMYYLRTKSASNPIKFTVEKDKLSNKT 750
Query: 781 AN 782
N
Sbjct: 751 CN 752
>gi|294471317|gb|ADE80903.1| RR1 [Spodoptera litura NPV]
Length = 772
Score = 1018 bits (2631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/775 (60%), Positives = 600/775 (77%), Gaps = 21/775 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV KRDGRKE V KI R++K YGL +P + ++V G+Y GVTT +LD L A
Sbjct: 6 YVTKRDGRKEDVSVRKIKYRIEKQCYGLDMYFVNPASLTRRVVQGIYPGVTTVELDNLIA 65
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA+MT++H DY+LLA R+AVSNLHK TK+ F I DMY ++++G +++D Y
Sbjct: 66 ETAASMTIDHSDYSLLAARLAVSNLHKETKDLFFNVIVDMYEAIDQKTGAATPMISDFHY 125
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
II NA L+ AI++DRDF++DYFGFKT++RSYL K++ VERPQ+M+MRV++GIH
Sbjct: 126 GIIAANADRLNSAIMHDRDFNYDYFGFKTMQRSYLFKINGITVERPQYMMMRVAIGIHGR 185
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D D+A++TY+LMS +FTHA+PTLF+A TP+ Q+SSCFL+ +K+DSIEGIYDTLK+CA+I
Sbjct: 186 DIDAAIETYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVAIKEDSIEGIYDTLKQCAMI 245
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKS GGIG +HN+RA GS + G +G++NG+VPML+V+N+TARYV+QGG KR GAFA+Y+
Sbjct: 246 SKSGGGIGFHVHNVRAKGSSVAGVDGAANGLVPMLRVYNNTARYVNQGGNKRPGAFAVYV 305
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+F+FLDL+KN GKEE RAR+LFYALW+PDLFM RV D WSL CP + GLAD
Sbjct: 306 EPWHADVFDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVETDAMWSLMCPMQSPGLAD 365
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
G+EFE LY +YE++GR +SA+ LW I+ +Q+ETGTPYML+KDSCNRKSNQ NLG
Sbjct: 366 CHGVEFEALYEKYEKQGRYVKRVSAQTLWRAIIEAQVETGTPYMLYKDSCNRKSNQSNLG 425
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVR-EKGVPVQSNVSKLVGSRDSKNRLF 480
TIK SNLCTEIVE++S +E AVCNLASIA+ ++V + GV +
Sbjct: 426 TIKCSNLCTEIVEYTSKDEVAVCNLASIAVNKFVAPQPGV-------------------Y 466
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFERL E+TKI+T NLN+IID N P+ RSN R+RPIGIG+QG+AD F+ + +P+ES
Sbjct: 467 DFERLKEITKIVTRNLNRIIDANQCPLREAERSNQRNRPIGIGVQGMADAFVTMRMPYES 526
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN-ITPSDRWD 599
A +LNK IFETIYY AL+AS ELA KDGPYETY GSP S+G LQ DMWN TPS+ WD
Sbjct: 527 DAAAELNKKIFETIYYGALEASCELAAKDGPYETYKGSPASRGELQYDMWNGATPSNLWD 586
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
WS L+ ISK G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+H
Sbjct: 587 WSLLKSKISKYGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRH 646
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
L+KDL +GLW+ +K I+Y NGSV I IP E++ +YKTVWE+ +T++ MAADRG
Sbjct: 647 LVKDLAAIGLWNDTMKNLIMYNNGSVQNIESIPFEIRQLYKTVWEMSMRTMIRMAADRGA 706
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
+IDQSQS N++M +P +GKLTS+HFYAW G+KTGMYYLRT+ AA+AI+FTVD +
Sbjct: 707 FIDQSQSFNVYMAEPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAANAIQFTVDKT 761
>gi|449139070|gb|AGE89875.1| RR1 [Spodoptera littoralis NPV]
Length = 828
Score = 1015 bits (2625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/773 (60%), Positives = 598/773 (77%), Gaps = 21/773 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV KRDGRKE V KI R++K YGL +P + ++V G+Y GVTT +LD L A
Sbjct: 48 YVTKRDGRKEDVSVRKIKYRIEKQCYGLDMYFVNPASLTRRVVQGIYPGVTTVELDNLIA 107
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETAA+MT++H DY+LLA R+AVSNLHK TK+ F I DMY ++++G +++D Y
Sbjct: 108 ETAASMTIDHSDYSLLAARLAVSNLHKETKDLFFNVIVDMYEAIDQKTGAATPMISDFHY 167
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
II NA L+ AI++DRDF++DYFGFKT++RSYL K++ VERPQ+M+MRV++GIH
Sbjct: 168 GIIAANADRLNSAIMHDRDFNYDYFGFKTMQRSYLFKINGITVERPQYMMMRVAIGIHGR 227
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D D+A++TY+LMS +FTHA+PTLF+A TP+ Q+SSCFL+ +K+DSIEGIYDTLK+CA+I
Sbjct: 228 DIDAAIETYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVAIKEDSIEGIYDTLKQCAMI 287
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKS GGIG +HN+RA GS + G +G++NG+VPML+V+N+TARYV+QGG KR GAFA+Y+
Sbjct: 288 SKSGGGIGFHVHNVRAKGSSVAGVDGAANGLVPMLRVYNNTARYVNQGGNKRPGAFAVYV 347
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHAD+F+FLDL+KN GKEE RAR+LFYALW+PDLFM RV D WSL CP + GLAD
Sbjct: 348 EPWHADVFDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVETDAMWSLMCPMQSPGLAD 407
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
G+EFE LY +YE++GR +SA+ LW I+ +Q+ETGTPYML+KDSCNRKSNQ NLG
Sbjct: 408 CHGVEFEALYEKYEKQGRYVKRVSAQTLWRAIIEAQVETGTPYMLYKDSCNRKSNQSNLG 467
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVR-EKGVPVQSNVSKLVGSRDSKNRLF 480
TIK SNLCTEIVE++S +E AVCNLASIA+ ++V + GV +
Sbjct: 468 TIKCSNLCTEIVEYTSKDEVAVCNLASIAVNKFVAPQPGV-------------------Y 508
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFERL E+TKI+T NLN+IID N P+ RSN R+RPIGIG+QG+AD F+ + +P+ES
Sbjct: 509 DFERLKEITKIVTRNLNRIIDANQCPLREAERSNQRNRPIGIGVQGMADAFVTMRMPYES 568
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN-ITPSDRWD 599
A +LNK IFETIYY AL+AS ELA KDGPYETY GSP S+G LQ DMWN TPS+ WD
Sbjct: 569 DAAAELNKKIFETIYYGALEASCELAAKDGPYETYKGSPASRGELQYDMWNGATPSNLWD 628
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
WS L+ ISK G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+H
Sbjct: 629 WSLLKSKISKYGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRH 688
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
L+KDL +GLW+ +K I+Y NGSV I IP E++ +YKTVWE+ +T++ MAADRG
Sbjct: 689 LVKDLAAIGLWNDTMKNLIMYNNGSVQNIESIPFEIRQLYKTVWEMSMRTMIRMAADRGA 748
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
+IDQSQS N++M +P +GKLTS+HFYAW G+KTGMYYLRT+ A +AI+FTVD
Sbjct: 749 FIDQSQSFNVYMAEPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAVNAIQFTVD 801
>gi|409042060|gb|EKM51544.1| hypothetical protein PHACADRAFT_261748 [Phanerochaete carnosa
HHB-10118-sp]
Length = 810
Score = 1015 bits (2625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/717 (65%), Positives = 580/717 (80%), Gaps = 20/717 (2%)
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
MT HPDYA+LA R+AVSNLHK TK SFS IKD+Y Y N ++G+ AS++A DVYEI+
Sbjct: 1 MTTKHPDYAILAARIAVSNLHKETKKSFSAVIKDLYEYVNPKNGRPASMIAKDVYEIVTA 60
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSA 186
NA LD A+IY RDF +++FGFKTLERSYLLK++ R ERPQH+LMRV+VGIH D D A
Sbjct: 61 NAERLDSAVIYSRDFSYNFFGFKTLERSYLLKINGRPAERPQHLLMRVAVGIHGADIDRA 120
Query: 187 LKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAG 246
++TY+LMS+ +FTHA+PTLFNAGTP PQLSSCFL+CMKDDSIEGIYDTLK CA+ISK+AG
Sbjct: 121 IETYNLMSERFFTHASPTLFNAGTPNPQLSSCFLVCMKDDSIEGIYDTLKSCAMISKTAG 180
Query: 247 GIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHA 306
GIGL+IHNIRA+GSYI GTNG SNGIVPML+ ++ TARYVDQGG KR GAFAIYLEPWHA
Sbjct: 181 GIGLNIHNIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYLEPWHA 240
Query: 307 DIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIE 366
DIFEF+DLRKN GKEE RARDLFYALW+PDLFM+RV +GKW+LFCP++A GL + WG E
Sbjct: 241 DIFEFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANGKWTLFCPNEAPGLHEVWGAE 300
Query: 367 FEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSS 426
FE LY +YE EGR + I A+KLW+ +L +QIETG P+ML+KDS N KSNQQNLGTIKSS
Sbjct: 301 FEELYERYEREGRGRKTIEAQKLWYAVLEAQIETGGPFMLYKDSANAKSNQQNLGTIKSS 360
Query: 427 NLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLA 486
NLCTEI+E+S+P+ETAVCNLASIALP Y+ +N ++F++L
Sbjct: 361 NLCTEIIEYSAPDETAVCNLASIALPSYI--------------------ENGQYNFQKLH 400
Query: 487 EVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQL 546
++TK++ NLN+IIDVN+YP RRSN+RHRPIG+G+ GLAD F+ L +PF+SPEA+QL
Sbjct: 401 DITKVVVYNLNRIIDVNYYPTPEARRSNMRHRPIGVGVNGLADAFMALRMPFDSPEARQL 460
Query: 547 NKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREM 606
NK IFETIY+ A++AS+++A +DGPYETY GSP S G LQ D+W +TPSD WDW+S++
Sbjct: 461 NKQIFETIYHAAVEASSDIAERDGPYETYEGSPASMGQLQYDLWGVTPSDLWDWASVKVK 520
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTE 666
+++ G+RNSLL+APMPTASTSQILG NECFEPYTSNIYTRRVL+GEF +V LL++L +
Sbjct: 521 VARTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQIVCPWLLRELVD 580
Query: 667 LGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQS 726
L LW +K II NGS+ I IP+++KAIYKTVWEI QK ++D+AADRG +I QSQS
Sbjct: 581 LKLWDDTMKNMIIANNGSIQSIIGIPDDIKAIYKTVWEISQKKVLDLAADRGAFICQSQS 640
Query: 727 LNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANR 783
LN+H++ P G+LTS+HFY W KG+KTGMYYLRTR AA AI+FTVD S+L + R
Sbjct: 641 LNVHLQSPTVGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSILKEAQQLR 697
>gi|290984045|ref|XP_002674738.1| ribonucleotide reductase [Naegleria gruberi]
gi|284088330|gb|EFC41994.1| ribonucleotide reductase [Naegleria gruberi]
Length = 812
Score = 1015 bits (2624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/829 (58%), Positives = 614/829 (74%), Gaps = 41/829 (4%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
++K+ G KE +KI RL+ + L + D ++ +K+ ++ +TT +LD L AE
Sbjct: 4 IVKKSGEKELFSSEKIRIRLQDHTKDLYHINIDSII--EKLQLEIHNDITTEKLDNLIAE 61
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
A M +HPDY LAGRV VS LHK TK+ FSE + D+ N+ + R+ + L++++V+
Sbjct: 62 CIAYMAYSHPDYLKLAGRVKVSTLHKHTKSKFSEVVHDLRNFIHPRTNLPSPLISEEVFN 121
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM-DSRVVERPQHMLMRVSVGIHKD 181
++ N LD AI +RDF FDYFG+KTLERSYLLK+ DSR+ ERPQHM MRVS+GIH
Sbjct: 122 VVAANVDVLDQAIKSERDFQFDYFGYKTLERSYLLKLADSRIAERPQHMFMRVSLGIHGG 181
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D + A++TY L+S F HA+PTLFNAGTP PQ+SSCFL+ MKDDSI GIYDTLK CA+I
Sbjct: 182 DIERAIQTYDLLSSGMFIHASPTLFNAGTPIPQMSSCFLVSMKDDSIHGIYDTLKTCALI 241
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKSAGGIGLS+HNIRASGSYI GTNG+SNG++PML+VFNDTARYVDQGGGKRKGAFAIYL
Sbjct: 242 SKSAGGIGLSVHNIRASGSYIRGTNGTSNGLIPMLRVFNDTARYVDQGGGKRKGAFAIYL 301
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWH+DIF+FLDLRKN GKEE RARDLF LWV DLFM+RV+DD +WSLFCP++A GLAD
Sbjct: 302 EPWHSDIFDFLDLRKNHGKEEIRARDLFLGLWVNDLFMQRVKDDAEWSLFCPNEAQGLAD 361
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EF LY++YE EG+AK I A++LWF I+ +QIETG PYML+KDSCNRKSNQQNLG
Sbjct: 362 VWGEEFNQLYTKYEREGKAKRTIKAQELWFAIIEAQIETGVPYMLYKDSCNRKSNQQNLG 421
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI+EF++P+E AVCNLASIALP+YV E + + +D
Sbjct: 422 TIKSSNLCTEIIEFTAPDEVAVCNLASIALPKYVNE------------------ETQTYD 463
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
++L EV KI T NLNKIID N+YP+E ++SN RHRPIG+G+QGLAD FI + LPFES
Sbjct: 464 HQKLYEVVKIATYNLNKIIDKNYYPVEEAKKSNFRHRPIGLGVQGLADAFIKMRLPFESE 523
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN---------I 592
EA+ LN++IFETIY+ A+ S ELA +G YETY GSP+SKGI Q + W
Sbjct: 524 EAKNLNREIFETIYFAAMTCSMELAKVEGTYETYEGSPISKGIFQHEFWTREGEPFEGKT 583
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
S RWDW LR+ + ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSN+YTRRVLSGE
Sbjct: 584 ITSGRWDWEGLRQQVLQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNVYTRRVLSGE 643
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
+ V+N+HL+ DL ++ +W+ + +II GS+ I IP+++K +YKTVWEIKQ++L+D
Sbjct: 644 YPVINRHLVADLIKIDMWNPTIVNQIIGNRGSIQNIQGIPDDIKELYKTVWEIKQRSLLD 703
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
+A +R +IDQSQSLN+ + P K++S+HFYAWSKG+KTGMYYLRT+ AADAI+FTVD
Sbjct: 704 LAIERSPFIDQSQSLNVFISIPSVSKMSSMHFYAWSKGLKTGMYYLRTQPAADAIQFTVD 763
Query: 773 TSVLNNEKANRADNDVEANLAQVVCSLKNQEE-----------CMACGS 810
+++ + + + +VC K + + C+ CG+
Sbjct: 764 PNMMKQSVSTSQAEEPKQEEEVIVCKRKKRGQAPPEGEEDEEECLVCGA 812
>gi|340504856|gb|EGR31263.1| ribonucleoside-diphosphate large, putative [Ichthyophthirius
multifiliis]
Length = 804
Score = 1013 bits (2620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/819 (58%), Positives = 616/819 (75%), Gaps = 63/819 (7%)
Query: 38 LVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSET 97
L+ QKV G+Y+GV TT LDEL+AET A M + HP Y+LLA R+AVSNLHK TK +F ET
Sbjct: 3 LIIQKVVKGMYQGVHTTTLDELSAETCAYMNIIHPHYSLLAARIAVSNLHKETKETFVET 62
Query: 98 IKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLL 157
I+D+YNY + ++ +KASL+ADDVY+I+++NA + I Y+RD+ +D+FGFKTLERSYLL
Sbjct: 63 IQDLYNYKDNQN-RKASLIADDVYQIVIENADLIQQQINYERDYTYDFFGFKTLERSYLL 121
Query: 158 KMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSS 217
K+ ++VERPQ MLMRVS+GIHK D SA +TY+LMS+ WFTHATPTLFNAG+P PQ+SS
Sbjct: 122 KIHGKIVERPQTMLMRVSIGIHKRDLQSAFRTYNLMSEKWFTHATPTLFNAGSPNPQMSS 181
Query: 218 CFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQ 277
CFLL M+ DSIEGIYDTLK+CA+ISKSAGGIG+S+HNIR+ SYI GTNG SNGI+PML+
Sbjct: 182 CFLLTMQSDSIEGIYDTLKQCALISKSAGGIGVSVHNIRSQDSYIRGTNGHSNGIIPMLK 241
Query: 278 VFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDL 337
VFNDTARYVDQGGGKRKG+FAIYLEPWHAD+F+FL L+KN GKEE RARDLFYALW+PD+
Sbjct: 242 VFNDTARYVDQGGGKRKGSFAIYLEPWHADVFDFLQLKKNHGKEEQRARDLFYALWIPDI 301
Query: 338 FMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQ 397
FM RV D W+L CP++ GL D WG EFE LY +YE EG+ + I AR+LW +I++SQ
Sbjct: 302 FMRRVIADEHWTLMCPNECLGLPDVWGEEFEKLYEKYEREGKGRKRIKARELWQDIIDSQ 361
Query: 398 IETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVRE 457
IETGTPYML+KD+CNRKSNQQNLGTI+SSNLCTEI+E++SP+E AVCNLASI+L ++V E
Sbjct: 362 IETGTPYMLYKDACNRKSNQQNLGTIRSSNLCTEIIEYTSPDEIAVCNLASISLQKFVVE 421
Query: 458 KGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRH 517
D++N F++ +L E++KI+T NLN++ID N+YP+ R SN++H
Sbjct: 422 ----------------DNENSYFEYNKLYEISKIVTFNLNRVIDENYYPVPQARLSNMKH 465
Query: 518 RPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFG 577
RPIGIG+QGLAD F+ L + FES +A ++N+ IFETIYY A +AS ELA+KDG Y ++ G
Sbjct: 466 RPIGIGVQGLADAFMKLKVSFESEKALEINEKIFETIYYGACEASMELAIKDGCYASFVG 525
Query: 578 SPMSKGILQVDMWNITPSD-RWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
SP S+G LQ D+WN P +DW SL+ I K G+RNSLL+APMPTASTSQILGN E F
Sbjct: 526 SPASQGKLQFDLWNYKPHKCGYDWDSLKSKIQKYGMRNSLLIAPMPTASTSQILGNCESF 585
Query: 637 EPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELK 696
EPYTSN+YTRRVL+GEF+ VN HL++DL ++ W+ ++K +++ NGSV +I EIPE LK
Sbjct: 586 EPYTSNLYTRRVLAGEFVCVNPHLVQDLIKINQWTPSVKNQLLAYNGSVQQIQEIPESLK 645
Query: 697 AIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMY 756
IYKTVWE+ QK ++++A R +IDQSQSLNIH+ +P + K+TS+HFYAW KG+KTGMY
Sbjct: 646 DIYKTVWEVSQKAIINLALSRSPFIDQSQSLNIHISEPSYSKMTSMHFYAWEKGLKTGMY 705
Query: 757 YLRTRAAADAIKFTVDTSVL-----------NNEKANRADN------------------- 786
YLR+R AAD IKFT+D L NN++ +N
Sbjct: 706 YLRSRPAADPIKFTLDVESLLKNAGDIQVQKNNKQKELDENNPEKFSEDPIKKLKIDEKE 765
Query: 787 DVEANLAQV---VCSLK------------NQEECMACGS 810
+++ N Q VC L+ + EEC ACGS
Sbjct: 766 NIQLNTQQPEDQVCPLRKKKKNSKGKWEYDDEECFACGS 804
>gi|373447499|gb|AEY72884.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|373449162|gb|AEY74540.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 763
Score = 1012 bits (2617), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/772 (62%), Positives = 596/772 (77%), Gaps = 29/772 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L +V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWN--------W 572
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 573 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 632
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 633 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 691
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 692 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 743
>gi|294471323|gb|ADE80908.1| RR1 [Spodoptera litura NPV]
Length = 778
Score = 1010 bits (2611), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/770 (60%), Positives = 596/770 (77%), Gaps = 21/770 (2%)
Query: 5 KRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETA 64
KRDGRKE V KI R++K YGL +P + ++V G+Y GVTT +LD L AETA
Sbjct: 4 KRDGRKEDVSVRKIKYRIEKQCYGLDMYFVNPASLTRRVVQGIYPGVTTVELDNLIAETA 63
Query: 65 AAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEII 124
A+MT++H DY+LLA R+AVSNLHK TK+ F I DMY ++++G ++ D Y II
Sbjct: 64 ASMTIDHSDYSLLAARLAVSNLHKETKDLFFNVIVDMYEAIDQKTGAATPMIPDFHYGII 123
Query: 125 MKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTD 184
NA L+ AI++DRDF++DYFGFKT++RSYL K++ VERPQ+M+MRV++GIH D D
Sbjct: 124 AANADRLNSAIMHDRDFNYDYFGFKTMQRSYLFKINGITVERPQYMMMRVAIGIHGRDID 183
Query: 185 SALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKS 244
+A++TY+LMS +FTHA+PTLF+A TP+ Q+SSCFL+ +K+DSIEGIYDTLK+CA+ISKS
Sbjct: 184 AAIETYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVAIKEDSIEGIYDTLKQCAMISKS 243
Query: 245 AGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPW 304
GGIG +HN+RA GS + G +G++NG+VPML+V+N+TARYV+QGG KR GAFA+Y+EPW
Sbjct: 244 GGGIGFHVHNVRAKGSSVAGVDGAANGLVPMLRVYNNTARYVNQGGNKRPGAFAVYVEPW 303
Query: 305 HADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWG 364
HAD+F+FLDL+KN GKEE RAR+LFYALW+PDLFM RV D WSL CP + GLAD G
Sbjct: 304 HADVFDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVETDAMWSLMCPMQSPGLADCHG 363
Query: 365 IEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIK 424
+EFE LY +YE++GR +SA+ LW I+ +Q+ETGTPYML+KDSCNRKSNQ NLGTIK
Sbjct: 364 VEFEALYEKYEKQGRYVKRVSAQTLWRAIIEAQVETGTPYMLYKDSCNRKSNQSNLGTIK 423
Query: 425 SSNLCTEIVEFSSPEETAVCNLASIALPRYVR-EKGVPVQSNVSKLVGSRDSKNRLFDFE 483
SNLCTEIVE++S +E AVCNLASIA+ ++V + GV +DFE
Sbjct: 424 CSNLCTEIVEYTSKDEVAVCNLASIAVNKFVAPQPGV-------------------YDFE 464
Query: 484 RLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEA 543
RL E+TKI+T NLN+IID N P+ RSN R+RPIGIG+QG+AD F+ + +P+ES A
Sbjct: 465 RLKEITKIVTRNLNRIIDANQCPLREAERSNQRNRPIGIGVQGMADAFVTMRMPYESDAA 524
Query: 544 QQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN-ITPSDRWDWSS 602
+LNK IFETIYY AL+AS ELA KDGPYETY GSP S+G LQ DMWN TPS+ WDWS
Sbjct: 525 AELNKKIFETIYYGALEASCELAAKDGPYETYKGSPASRGELQYDMWNGATPSNLWDWSL 584
Query: 603 LREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLK 662
L+ ISK G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL+K
Sbjct: 585 LKSKISKYGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHLVK 644
Query: 663 DLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYID 722
DL +GLW+ +K I+Y NGSV I IP E++ +YKTVWE+ +T++ MAADRG +ID
Sbjct: 645 DLAAIGLWNDTMKNLIMYNNGSVQNIESIPFEIRQLYKTVWEMSMRTMIRMAADRGAFID 704
Query: 723 QSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
QSQS N++M +P +GKLTS+HFYAW+ G+KTGMYYLRT+ A +AI+FTVD
Sbjct: 705 QSQSFNVYMAEPSYGKLTSIHFYAWNMGLKTGMYYLRTKPAVNAIQFTVD 754
>gi|428169292|gb|EKX38227.1| hypothetical protein GUITHDRAFT_158515 [Guillardia theta CCMP2712]
Length = 831
Score = 1009 bits (2610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/781 (60%), Positives = 605/781 (77%), Gaps = 20/781 (2%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+ KRDG+K+P++ K+ AR+ +L GL+ + D + KV AG +G+ + ++DELAAE
Sbjct: 2 ITKRDGKKQPLKRFKLHARIARLVDGLNADFVDIDQIVDKVVAGTCQGIKSQEIDELAAE 61
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA + +HPDY+ LA R++VS LHK+T+ +FS+ IK +YN+ + +SG K +A DVYE
Sbjct: 62 TAAYLATDHPDYSQLAARISVSALHKVTQQTFSQKIKALYNHVHSKSGAKGPKIASDVYE 121
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDD 182
I+++NA LD AI Y RDF FDYFG+KTLERSYLL+++ VVERPQ M MRVSVGIHK D
Sbjct: 122 IVIENAETLDAAIDYSRDFTFDYFGYKTLERSYLLRIEGHVVERPQDMFMRVSVGIHKQD 181
Query: 183 TDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIIS 242
D+A++TY+LMS +FTHATPTLFNAGTP+ QLSSCFLL +KDDSIEGIY+T+ KCA IS
Sbjct: 182 IDAAIQTYNLMSLKFFTHATPTLFNAGTPRNQLSSCFLLQLKDDSIEGIYETVGKCATIS 241
Query: 243 KSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLE 302
AGGIG+S+HN+RA GSY+ ++G +NG++PML+VFN TAR QG GKR GAFA+YLE
Sbjct: 242 AQAGGIGISVHNVRARGSYVENSSGIANGLIPMLKVFNSTARLCSQGAGKRPGAFAVYLE 301
Query: 303 PWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADS 362
PWHA+IFEFL+L+KN G E+ RARDLFYALW+PDLFM+R DG WSLFCP +A GL ++
Sbjct: 302 PWHAEIFEFLELKKNFGSEDLRARDLFYALWMPDLFMKRCEADGAWSLFCPVEAPGLCET 361
Query: 363 WGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGT 422
+G +FE LY +YE EGRA+ I AR+LWF IL +Q+E G PY+L+KD+ N KSNQ+NLG
Sbjct: 362 YGEKFEELYERYEREGRARKTIKARELWFAILEAQVENGIPYLLYKDAANEKSNQKNLGI 421
Query: 423 IKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDF 482
IK SNLCTEI+E++S +E AVCNLASI LPR+V E FD
Sbjct: 422 IKCSNLCTEIMEYTSKDEVAVCNLASICLPRFVVEGQ--------------------FDH 461
Query: 483 ERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPE 542
+ L EVT +IT NLNKIID+N YP++ + SN RHRPIGIG+QGLAD F+LL LPFES E
Sbjct: 462 KLLFEVTIVITRNLNKIIDINLYPVKEAQTSNFRHRPIGIGVQGLADVFLLLRLPFESEE 521
Query: 543 AQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSS 602
A+QLN+DIFETIY+ A+ AS +LA G Y ++ GSP S G+LQ D+W PS RWDW+S
Sbjct: 522 ARQLNRDIFETIYFAAMTASNQLAKDHGAYSSFRGSPASMGLLQFDLWGAEPSPRWDWTS 581
Query: 603 LREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLK 662
L+E I ++G+RNSL VAPMPTAST+QI+GNNECFEPYTSNIY RRV++G+F+V+N HLLK
Sbjct: 582 LKESIKEHGLRNSLTVAPMPTASTAQIMGNNECFEPYTSNIYNRRVMAGDFLVLNPHLLK 641
Query: 663 DLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYID 722
DL LGLWS +K +I+ +GS+ I EIP++++ +YKT WEIKQ+ L+DMAADRG +ID
Sbjct: 642 DLIALGLWSQKMKHRIMAYDGSIQDILEIPKDIRELYKTAWEIKQRCLIDMAADRGAFID 701
Query: 723 QSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKAN 782
QSQSLN+ +E PD KLTS+HFYAW KG+KTG+YYLRTRAAADAIKFT+D S + + +
Sbjct: 702 QSQSLNLFLEAPDTAKLTSMHFYAWRKGLKTGVYYLRTRAAADAIKFTLDHSTVVEARLS 761
Query: 783 R 783
R
Sbjct: 762 R 762
>gi|353243108|emb|CCA74687.1| probable RNR1-ribonucleoside-diphosphate reductase large subunit
[Piriformospora indica DSM 11827]
Length = 916
Score = 1009 bits (2610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/802 (59%), Positives = 602/802 (75%), Gaps = 63/802 (7%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPV-----------------------L 38
YV KR RKE V+FDKITAR+ KL YGL +H DP+
Sbjct: 3 YVFKRGQRKERVQFDKITARINKLCYGLDPDHVDPIECVFRLLSSIGNRQTALTLSSLLR 62
Query: 39 VAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETI 98
+ +KV AGVY GVTT +LD LA+ETAA +T HPDYA+LA R+A+SNLHK TK +FS I
Sbjct: 63 ITKKVIAGVYNGVTTVELDNLASETAAYLTTKHPDYAILAARIAISNLHKETKKNFSAVI 122
Query: 99 KDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK 158
+D+Y K +GK A +++ +VYEI+M NA D IIYDRDF ++YFGFKTLERSYLL+
Sbjct: 123 EDLY----KHNGKPAGMISKEVYEIVMANAELFDSTIIYDRDFHYNYFGFKTLERSYLLR 178
Query: 159 MDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSC 218
++ RV ERPQHMLMRV+VGIH D D ++TY+LMS+ +FTHA+PTLFNAGTP PQLSSC
Sbjct: 179 INGRVAERPQHMLMRVAVGIHGRDVDRVVETYNLMSERYFTHASPTLFNAGTPHPQLSSC 238
Query: 219 FLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQV 278
FL+ MKDDSIEGIYDTLK CA+ISK+AGGIGL+IH IRA+GSYI GTNG SNGIVPML+
Sbjct: 239 FLVTMKDDSIEGIYDTLKTCAMISKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRA 298
Query: 279 FNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLF 338
++ TARYVDQGG KR GAFAIY+EPWHADIFEFLDLRKN GKEE RARDLFYALW+PDLF
Sbjct: 299 YDATARYVDQGGNKRPGAFAIYIEPWHADIFEFLDLRKNHGKEEVRARDLFYALWIPDLF 358
Query: 339 MERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQI 398
M+R DG WSLFCP++A GL + +G EFE LY++YE EGRA+ I A+KL+F ++ +QI
Sbjct: 359 MKRAESDGDWSLFCPNEAPGLHEVYGDEFEELYTRYEREGRARKTIKAQKLFFAVMEAQI 418
Query: 399 ETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREK 458
ETG P+ML+KD+ NRKSNQQNLGTIKSSNLCTEI+E+SSP+E AVCNLAS+ALP +V
Sbjct: 419 ETGGPFMLYKDAANRKSNQQNLGTIKSSNLCTEIIEYSSPDEVAVCNLASLALPTFV--- 475
Query: 459 GVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHR 518
K+ +DF++L +VTK++ NLN+IIDVN+YP+ R+SN+RHR
Sbjct: 476 -----------------KDGAYDFQKLHDVTKVVAFNLNRIIDVNYYPVPEARKSNMRHR 518
Query: 519 PIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGS 578
PIGIG+QGLADTF+ L +PF+S +A++LN IFETIY+ A +ASAE+A GPYET+ GS
Sbjct: 519 PIGIGVQGLADTFMALRMPFDSVQAKELNIQIFETIYHAACEASAEMAEMMGPYETFEGS 578
Query: 579 PMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
P S+G LQ D+W + P+ WDW SL+E I+ +G+RNSLL+APMPTA+TS ++ ++
Sbjct: 579 PASEGKLQYDLWGVQPTGLWDWDSLKEKIAAHGMRNSLLLAPMPTATTSTLVEFSQ---- 634
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
G +V LL++L +L LW+ +K II GS+ KI IP+++KAI
Sbjct: 635 ------------GSSRLVCPWLLRELVDLKLWNDEMKNMIIAHGGSIQKIPGIPDDVKAI 682
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
YKTVWEI QK ++D+AADRG +I QSQSLN+H++ P G+LTS+HFY W KG+KTGMYYL
Sbjct: 683 YKTVWEISQKKVIDLAADRGAFICQSQSLNVHLQNPSVGQLTSMHFYGWKKGLKTGMYYL 742
Query: 759 RTRAAADAIKFTVDTSVLNNEK 780
RTR AA AI+FTVD S+LN K
Sbjct: 743 RTRPAAQAIQFTVDQSILNKAK 764
>gi|312385901|gb|EFR30291.1| hypothetical protein AND_00204 [Anopheles darlingi]
Length = 775
Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/780 (61%), Positives = 598/780 (76%), Gaps = 41/780 (5%)
Query: 32 EHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITK 91
+ DPV + KV G+Y GVTT +LD LAAETAA MT +H DYA+LA R+AVSNLHK TK
Sbjct: 2 DFVDPVAITLKVINGLYSGVTTQELDNLAAETAATMTTDHADYAILAARLAVSNLHKETK 61
Query: 92 NSFS---------------ETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAII 136
FS + + D+Y N+ K+ ++++ Y++IM+NA L+ AII
Sbjct: 62 KQFSGKRMTPLVIRQESLEKVMHDLYMMENEFLKTKSPMISNTHYKLIMENADRLNSAII 121
Query: 137 YDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQH 196
YDRDF ++YFGFKTLERSYLLK+ ++VERPQHMLMRV++GIH +D DSA++TY+L+S+
Sbjct: 122 YDRDFGYNYFGFKTLERSYLLKIKGKIVERPQHMLMRVAIGIHGEDIDSAIETYNLLSER 181
Query: 197 WFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIR 256
+FTHA+PT+F A T +PQLSSCFLL M DDSIEGIYDTLK+CA+ISKSAGGIGL++H IR
Sbjct: 182 YFTHASPTMFAAATQRPQLSSCFLLTMSDDSIEGIYDTLKQCALISKSAGGIGLNVHCIR 241
Query: 257 ASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRK 316
A G+YI GTNG SNG+VPML+V+N+TARYVDQGG KR GAFAIYLEPWH D+FEFLDL+K
Sbjct: 242 AKGTYIAGTNGISNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHGDVFEFLDLKK 301
Query: 317 NQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEE 376
N GKEE RARD+FYALW+PDLFM+RV + WSL CP D GL+++WG EFE LY+ YE
Sbjct: 302 NTGKEEVRARDMFYALWIPDLFMQRVEANEMWSLMCPHDCPGLSETWGEEFEKLYTGYER 361
Query: 377 EGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFS 436
EGR + A+ LWF I+ SQ+ETG PYML+KD+CNRKSNQQN+GTIK SNLCTEIVE+S
Sbjct: 362 EGRFTRQVKAQDLWFAIIESQVETGVPYMLYKDACNRKSNQQNIGTIKCSNLCTEIVEYS 421
Query: 437 SPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENL 496
S +E AVCNLASIAL +V+ +R +DF +L EV K +T+NL
Sbjct: 422 SKDEIAVCNLASIALNMFVK-------------------PDRTYDFAKLKEVAKTVTKNL 462
Query: 497 NKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYY 556
NKIID+N+YP+ +RSN+RHRPIGIG+QG+AD FIL+ P+ES EAQ LN+ +FETIY+
Sbjct: 463 NKIIDINYYPVPEAKRSNMRHRPIGIGVQGMADAFILMRHPYESEEAQLLNQQMFETIYF 522
Query: 557 HALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSL 616
AL+AS ELA +DGPYE+Y GSP+SKGILQ DMW P++ WDW+ L+ I +GVRNSL
Sbjct: 523 GALEASCELAAQDGPYESYDGSPVSKGILQYDMWEKKPTELWDWAELKRNIVTHGVRNSL 582
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKT 676
L+APMPTAST+QILGNNE FEPYTSN+Y RRVLSGEF VVN HLLKDLTEL LW +K
Sbjct: 583 LLAPMPTASTAQILGNNESFEPYTSNVYNRRVLSGEFQVVNHHLLKDLTELELWDDEMKN 642
Query: 677 KIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDH 736
KI+ +NGS+ KI EIP+ ++ +YKTVWEI KT + MAADRG +IDQSQS NIH+ +P++
Sbjct: 643 KILAQNGSIQKIEEIPQHIRNLYKTVWEISVKTCIKMAADRGAFIDQSQSFNIHVAEPNY 702
Query: 737 GKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVV 796
GKLTS+HFY W G+KTGMYYLRT+ A +AI+FTVD S L N E+NLA V
Sbjct: 703 GKLTSIHFYGWKMGLKTGMYYLRTKPAVNAIQFTVDKSKLQN-------GATESNLAVAV 755
>gi|426367047|ref|XP_004050549.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Gorilla gorilla gorilla]
Length = 757
Score = 1005 bits (2599), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/811 (60%), Positives = 614/811 (75%), Gaps = 55/811 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK++ NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+KN G + F + +VN HL
Sbjct: 582 KLLKEKIAKNN-------------------GFWKSF----------------WRIVNPHL 606
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 607 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 666
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 667 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 726
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 727 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 757
>gi|335682|gb|AAA48274.1| Vaccinia virus matrix 1 protein [Vaccinia virus]
Length = 771
Score = 1005 bits (2599), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/772 (61%), Positives = 596/772 (77%), Gaps = 21/772 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL CP + GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY+ YE E R K +I AR +W I+ SQIETGTP++L+KD+CN+KSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI++++ E AVCNL S+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLGSVALNMFV--------------IDGR------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L V K+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FILL PF+S
Sbjct: 461 DFLKLKVVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ +NK IFETIYY AL+AS ELA K+GPY+TY GS S GILQ D+WN+ PSD W+W
Sbjct: 521 LEAQDINKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L++ I G+RNSLLVAP+P +QILGNNE EPYTSNIYTRRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPLPLHQHAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+ LTE LW+ +K +I+ + GS+ + +PE++K +YKT+WEI QKT++ MAADRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+NIH+ P + KLTS+HFY WS G+KTGMYYLRT+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLD 751
>gi|442761207|gb|JAA72762.1| Putative ribonucleotide reductase alpha subunit, partial [Ixodes
ricinus]
Length = 740
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/744 (64%), Positives = 596/744 (80%), Gaps = 24/744 (3%)
Query: 29 LSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK 88
L + C +A+KV G+Y+GVTT +LD LAAETAA MT HPDYALLA R+AVSNLHK
Sbjct: 10 LGRNSCS---IAKKVINGLYEGVTTVELDNLAAETAATMTTKHPDYALLAARIAVSNLHK 66
Query: 89 ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGF 148
TK SFSE I ++Y+ N+ + ++ +++Y+I+M+NA + AI+YDRDF+++YFGF
Sbjct: 67 ETKKSFSEVISNLYHMINESNNLHTPMIDEEIYKIVMENADTFNSAIVYDRDFNYNYFGF 126
Query: 149 KTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNA 208
KTLER+YLL+++ +VVERPQHMLMRVS+GIH +D + L+TY+LMS+ WFTHA+PTLFN+
Sbjct: 127 KTLERAYLLRINGKVVERPQHMLMRVSIGIHGNDLKNVLETYNLMSEKWFTHASPTLFNS 186
Query: 209 GTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGS 268
GTP+PQLSSCFLL MK DSIEGIYDTLK+CA+ISKSAGGIGL++HNIRA+GSYI G+NG
Sbjct: 187 GTPRPQLSSCFLLQMKSDSIEGIYDTLKQCALISKSAGGIGLNVHNIRAAGSYIAGSNGK 246
Query: 269 SNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDL 328
S+GIVPML+V+N+TARYVDQGG KR GA AIYLEPWHAD+F+FLDL+KN GKEE RARDL
Sbjct: 247 SSGIVPMLRVYNNTARYVDQGGNKRPGAIAIYLEPWHADVFDFLDLKKNTGKEENRARDL 306
Query: 329 FYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARK 388
FYALW+PDLFMERV + WSL CP+D GL D +G +FE LY++YE E R + A+K
Sbjct: 307 FYALWIPDLFMERVEKNETWSLMCPNDCPGLDDVYGKKFEQLYTKYESEKRYIRQVPAQK 366
Query: 389 LWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLAS 448
LW+ I+ SQ ETGTPYML+KD+CN KSNQ+N+GTIK SNLCTEIVE++S +E AVCNLAS
Sbjct: 367 LWYAIVESQTETGTPYMLYKDACNEKSNQKNIGTIKCSNLCTEIVEYTSDKEVAVCNLAS 426
Query: 449 IALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIE 508
IAL R+VR N FDFE+L V++IIT NLN+II+ N YPI
Sbjct: 427 IALNRFVR--------------------NGHFDFEQLRRVSRIITVNLNRIIERNFYPIP 466
Query: 509 TTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVK 568
+ SN+RHRPIGIG+QGLADTFILL LPF+S EA+ LN+ IFETIYY AL+ S ELA
Sbjct: 467 EAKLSNMRHRPIGIGVQGLADTFILLRLPFDSEEARLLNRQIFETIYYGALEQSCELAKN 526
Query: 569 DGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQ 628
GPYETY GSP+SKG+LQ DM P++ WDW+SL++ I K GVRNSLLVAPMPTAST+Q
Sbjct: 527 LGPYETYPGSPVSKGLLQYDMXXXKPTEMWDWTSLKKQIVKYGVRNSLLVAPMPTASTAQ 586
Query: 629 ILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKI 688
ILGNNE EPYT+N+YTRRVLSGEF VVN HLLKDLT+ GLW+ LK +I +GSV K+
Sbjct: 587 ILGNNESIEPYTTNVYTRRVLSGEFQVVNYHLLKDLTDRGLWNDELKNALIANHGSVQKL 646
Query: 689 SEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWS 748
+ IP++LK +Y+TVWEI QK +++MAADRG +IDQSQSLNIH+ QP + K+TS+HF+ W
Sbjct: 647 N-IPDDLKHLYRTVWEIPQKHILEMAADRGAFIDQSQSLNIHIAQPTYSKITSMHFFGWK 705
Query: 749 KGMKTGMYYLRTRAAADAIKFTVD 772
G+KTGMYYLRT+ AA+AI+FTVD
Sbjct: 706 LGLKTGMYYLRTKPAANAIQFTVD 729
>gi|307196361|gb|EFN77956.1| Ribonucleoside-diphosphate reductase large subunit [Harpegnathos
saltator]
Length = 849
Score = 1001 bits (2589), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/836 (58%), Positives = 612/836 (73%), Gaps = 44/836 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+GRKE V FDKIT+R+ K Y L+ + DP VA +V G+Y GVTT +LD LA
Sbjct: 32 MHVIKRNGRKEDVHFDKITSRIAKQCYSLNMNYVDPSAVAIQVIRGLYSGVTTVELDNLA 91
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA M HPDYA+LA R+ VSNLHK TK SFSE + D++ + + + ++++
Sbjct: 92 AETAATMATQHPDYAILAARIDVSNLHKETKKSFSEVMHDLHYARDPITNEPNPVISEHY 151
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y II +NA LD AIIYDRDF+++Y GFKTLERSYLLK++ ++VERPQHMLMRV+VGIH+
Sbjct: 152 YNIIKRNAERLDSAIIYDRDFNYNYMGFKTLERSYLLKINGKIVERPQHMLMRVAVGIHE 211
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY +S+ +FTHA+PTLFNA T Q+SSCFLL + DDSI+GIY TLKKCA+
Sbjct: 212 DDINKVIETYDYLSERYFTHASPTLFNACTKNQQMSSCFLLTLNDDSIKGIYGTLKKCAL 271
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+++H IRA + ++NG++ +L+++ND A YVDQGG KR GAFA+Y
Sbjct: 272 ISKYAGGIGINVHCIRAKDTDDTYDTDATNGLISVLKLYNDIAIYVDQGGNKRPGAFAVY 331
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FL+L++N G RARDLFYALWVPDLFMERV DD WSL CP ++ GLA
Sbjct: 332 LEPWHADIFDFLELKRNIGDGNLRARDLFYALWVPDLFMERVFDDEVWSLMCPYESPGLA 391
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EF LY++YE+EGR K + AR +W IL SQ+ETGTPYML+KD CNRKSN Q+L
Sbjct: 392 DVWGDEFNELYTRYEKEGRYKRQVQARDVWVTILRSQVETGTPYMLYKDHCNRKSNHQHL 451
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE+SSPEE AVCNLASIAL +V ++ + F
Sbjct: 452 GTIKCSNLCTEIVEYSSPEEVAVCNLASIALNMFV------------------NTNKKTF 493
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L V KI+T NL+K+IDVN YPI T+RSN RHRPIGIG+QGLAD F+L+ PFES
Sbjct: 494 DFDKLKTVVKIVTRNLDKVIDVNFYPIPETKRSNRRHRPIGIGVQGLADAFLLMRYPFES 553
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFET+YY AL+AS ELA + G YETY GSP+SKGILQ DMWN+ P+D WDW
Sbjct: 554 KEAKELNIKIFETLYYGALEASCELAAEKGTYETYEGSPVSKGILQYDMWNVKPTDLWDW 613
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+ I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIY RRVLSGEF+++N HL
Sbjct: 614 DELKTKIAKHGVRNSLLIAPMPTASTAQILGNNESIEAYTSNIYVRRVLSGEFVIINPHL 673
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLT GLW ++ +I+ GSV I IP++LK +YKTVWEI QK +++MAADRG +
Sbjct: 674 LRDLTVRGLWGKDMQNEILANFGSVQNIERIPDDLKELYKTVWEISQKVILEMAADRGAF 733
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL---- 776
IDQSQSLNIH+ P KLTS+HF+ W G+KTGMYYLRT+ AA+ I+FTVD S L
Sbjct: 734 IDQSQSLNIHIADPSTEKLTSMHFFGWRSGLKTGMYYLRTKPAANPIQFTVDKSKLQSRD 793
Query: 777 ---------------------NNEKANRADNDVEANL-AQVVCSLKNQEECMACGS 810
N+EK N + NL A + C+ +N++ CMAC S
Sbjct: 794 SLSSSTSDISSPIKSPDKDADNSEKRNLINQQANKNLEAMLACARENKDACMACSS 849
>gi|171399|gb|AAA34569.1| ribonucleotide reductase DNA damage-inducible regulatory subunit,
partial [Saccharomyces cerevisiae]
Length = 756
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/777 (60%), Positives = 599/777 (77%), Gaps = 27/777 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPV+FDKIT+R+ +LSYGL D V V Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDYA LA R+A+SNLHK T FS+ I+D++++ N +GK A +++D++
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+M+ L+ AI+YDRDF + YFGFKTLERSYLL+++ V ERPQH++MRV++GIH
Sbjct: 121 YNIVME-TRYLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D +S LKTY+LMS +FTHA+PTLFNAGTP PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 180 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPLPQMSSCFLIAMKDDSIEGIYDTLKECAM 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AG + I+NIR++GSYI GTNG+SNG++PM++VFN+TARYV R +
Sbjct: 240 ISKTAGVLS-HINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYV-----TRVVTRDLV 293
Query: 301 LEP--WHADI---FEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
L P W + D+RK GKEE RARDLF ALW+PDLFM+RV++DG W+LF PS
Sbjct: 294 LSPFSWSHGMQISSTKFDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSA 353
Query: 356 ASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKS 415
A GL D WG EFE LY++YE EGR K I A+KLW+ IL +Q ETGTP+M++KD+CNRK+
Sbjct: 354 APGLDDVWGDEFEELYTRYEREGRGK-TIKAQKLWYAILQAQTETGTPFMVYKDACNRKT 412
Query: 416 NQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDS 475
NQQNLGTIKSSNLC EIVE+SSP+ETAVCNLASIALP +V S D
Sbjct: 413 NQQNLGTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDG 458
Query: 476 KNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLG 535
K ++FERL E+ K+IT NLN++ID N+YP+ R SN++HRPI +G+QGLADT+++L
Sbjct: 459 KTASYNFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLR 518
Query: 536 LPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS 595
LPFES EAQ LNK IFETIY+ L+AS ELA K+G Y T+ GSP SKGILQ DMWN P
Sbjct: 519 LPFESEEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPF 578
Query: 596 DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
WDW +LR+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y+RRVLSGEF V
Sbjct: 579 GMWDWETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQV 638
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VN +LL+DL +LG+W ++K +I +NGS+ + +P+ELK +YKTVWEI QKT+++MAA
Sbjct: 639 VNPYLLRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAA 698
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
DR YIDQS SLN+ ++ P GK+TS+HFY W KG+KTGMYYLRT+AA+ AI+FT+D
Sbjct: 699 DRAIYIDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTID 755
>gi|294471336|gb|ADE80919.1| RR1 [Spodoptera litura NPV]
Length = 778
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/770 (60%), Positives = 593/770 (77%), Gaps = 21/770 (2%)
Query: 5 KRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETA 64
KRDGRKE V KI R++K YGL +P + ++V G+Y GVTT +LD L AETA
Sbjct: 4 KRDGRKEDVSVRKIKYRIEKQCYGLDMYFVNPASLTRRVVQGIYPGVTTVELDNLIAETA 63
Query: 65 AAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEII 124
A+MT++H DY+LLA R+AVSNLH TK+ F I DMY ++++G +++D Y II
Sbjct: 64 ASMTIDHSDYSLLAARLAVSNLHNETKDLFFNVIVDMYEAIDQKTGAATPMISDFHYGII 123
Query: 125 MKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTD 184
NA L+ AI++DRDF++DYFGFKT++RSYL K++ VERPQ+M+MRV++GIH D D
Sbjct: 124 AANADRLNSAIMHDRDFNYDYFGFKTMQRSYLFKINGITVERPQYMMMRVAIGIHGRDID 183
Query: 185 SALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKS 244
+A++TY+LMS +FTHA+PTLF+A TP+ Q+SSCFL+ +K+DSIEGIYDTLK+CA+ISKS
Sbjct: 184 AAIETYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVAIKEDSIEGIYDTLKQCAMISKS 243
Query: 245 AGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPW 304
GGIG +HN+RA GS + G +G++NG+VPML+V+N+TARYV+QGG KR GAFA+Y+EPW
Sbjct: 244 GGGIGFHVHNVRAKGSSVAGVDGAANGLVPMLRVYNNTARYVNQGGNKRPGAFAVYVEPW 303
Query: 305 HADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWG 364
HAD+ +FLDL+KN GKEE RAR+LFYALW+PDLFM RV D WSL CP + GLAD G
Sbjct: 304 HADVSDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVETDAMWSLMCPMQSPGLADCHG 363
Query: 365 IEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIK 424
+EFE LY +YE++GR +SA+ LW I+ +Q+ETGTPYML+KDSCNRKSNQ NLGTIK
Sbjct: 364 VEFEALYEKYEKQGRYVKRVSAQTLWRAIIEAQVETGTPYMLYKDSCNRKSNQSNLGTIK 423
Query: 425 SSNLCTEIVEFSSPEETAVCNLASIALPRYVR-EKGVPVQSNVSKLVGSRDSKNRLFDFE 483
SNLCTEIVE++S +E AVCNLASIA+ ++V + GV +DFE
Sbjct: 424 CSNLCTEIVEYTSKDEVAVCNLASIAVNKFVAPQPGV-------------------YDFE 464
Query: 484 RLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEA 543
RL E+TKI+T NLN+IID N P+ RSN R+RPIGIG+QG+AD F+ + +P+ES A
Sbjct: 465 RLKEITKIVTRNLNRIIDANQCPLREAERSNQRNRPIGIGVQGMADAFVTMRMPYESDAA 524
Query: 544 QQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN-ITPSDRWDWSS 602
+LNK IFETIYY AL+AS ELA KDGPYETY GS S+G LQ DMWN TPS+ WDWS
Sbjct: 525 AELNKKIFETIYYGALEASCELAAKDGPYETYKGSRASRGELQYDMWNGATPSNLWDWSL 584
Query: 603 LREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLK 662
L+ ISK G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL+K
Sbjct: 585 LKSKISKYGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHLVK 644
Query: 663 DLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYID 722
DL +GLW+ +K I+Y NGSV I IP E++ +YKTVWE+ +T++ MAADRG +ID
Sbjct: 645 DLAAIGLWNDTMKNLIMYNNGSVQNIESIPFEIRQLYKTVWEMSMRTMIRMAADRGAFID 704
Query: 723 QSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
QSQS N++M +P +GKLTS+HFYAW G+KTGMYYLRT+ A +AI+FTVD
Sbjct: 705 QSQSFNVYMAEPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAVNAIQFTVD 754
>gi|229597646|pdb|2WGH|A Chain A, Human Ribonucleotide Reductase R1 Subunit (Rrm1) In
Complex With Datp And Mg.
gi|229597647|pdb|2WGH|B Chain B, Human Ribonucleotide Reductase R1 Subunit (Rrm1) In
Complex With Datp And Mg
Length = 676
Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/688 (67%), Positives = 562/688 (81%), Gaps = 19/688 (2%)
Query: 75 ALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGA 134
A+LA R+AVSNLHK TK FS+ ++D+YNY N +GK + +VA +I++ N L+ A
Sbjct: 2 AILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSA 61
Query: 135 IIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMS 194
IIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK+D D+A++TY+L+S
Sbjct: 62 IIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLS 121
Query: 195 QHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHN 254
+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+ISKSAGGIG+++
Sbjct: 122 ERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSC 181
Query: 255 IRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDL 314
IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIYLEPWH DIFEFLDL
Sbjct: 182 IRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDL 241
Query: 315 RKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQY 374
+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL + WG EFE LY+ Y
Sbjct: 242 KKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASY 301
Query: 375 EEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVE 434
E++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNLGTIK SNLCTEIVE
Sbjct: 302 EKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVE 361
Query: 435 FSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITE 494
++S +E AVCNLAS+AL YV + +DF++LAEVTK++
Sbjct: 362 YTSKDEVAVCNLASLALNMYV-------------------TSEHTYDFKKLAEVTKVVVR 402
Query: 495 NLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETI 554
NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFES EAQ LNK IFETI
Sbjct: 403 NLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETI 462
Query: 555 YYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRN 614
YY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW L+E I+K G+RN
Sbjct: 463 YYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRN 522
Query: 615 SLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHAL 674
SLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HLLKDLTE GLW +
Sbjct: 523 SLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEM 582
Query: 675 KTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQP 734
K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +IDQSQSLNIH+ +P
Sbjct: 583 KNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEP 642
Query: 735 DHGKLTSLHFYAWSKGMKTGMYYLRTRA 762
++GKLTS+HFY W +G+KTGMYYLRTRA
Sbjct: 643 NYGKLTSMHFYGWKQGLKTGMYYLRTRA 670
>gi|1710392|sp|P50647.1|RIR1_PLAFG RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase R1 subunit
gi|349792|gb|AAA29755.1| ribonucleotide reductase large subunit [Plasmodium falciparum]
Length = 804
Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/823 (58%), Positives = 617/823 (74%), Gaps = 36/823 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+ R G +E + FD+I R+++LSYGL K P V Q V G+Y + T +LDELA
Sbjct: 1 MYVLNRKGEEEDISFDQILKRIQRLSYGLHKLGEYPACVTQGVINGMYSSIKTCELDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T A M HPD+++LA R+ NLHK T + +E + +Y Y + R G+ ASL++ +V
Sbjct: 61 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDVAEVAEALYTYKDGR-GRPASLISKEV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ I+ + L+ I Y F++DYFGFKTLERSYLL+++++++ERPQH+LMRVS+GIH
Sbjct: 120 YDFILLHKVRLNKEIDYTTHFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHI 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD D AL+TYHLMSQ +FTHATPTLFN+GTP+PQ+SSCFLL MK DSIEGI++TLK+CA+
Sbjct: 180 DDIDKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKADSIEGIFETLKQCAL 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+++ +IR SYI GTNG SNG+VPML+VFNDTARYVDQGGGKRKG++A+Y
Sbjct: 240 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSYAVY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH+DIFEFLDLRKN GKEE RARDLFYA+WVPDLFM+RV+++ W+L CP++ GL+
Sbjct: 300 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPNECPGLS 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
++WG EFE LY++YEEE K + A+ LWF IL SQIETG P L+KDSCN K +NL
Sbjct: 360 ETWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPIYLYKDSCNAKP-IKNL 418
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLC EI+E++SP+E AVCNLASIAL ++V D + + F
Sbjct: 419 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DLEKKEF 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L E+TKIIT NL+KII+ N+YP++ + SN RHRPIGIG+QGLADTF+LL +ES
Sbjct: 461 NFKKLYEITKIITRNLDKIIERNYYPVKEAKTSNTRHRPIGIGVQGLADTFMLLRYLYES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-WD 599
A++LNK I+ET+YY AL+ S + ++ GPYE+Y GSP S+GILQ DMWN ++ WD
Sbjct: 521 DAAKELNKRIYETMYYAALEMSVDW-LQSGPYESYQGSPGSQGILQFDMWNAKVDNKYWD 579
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L+ I+K G+RN LL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 580 WDELKLKIAKTGLRNLLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 639
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDL + GLW +K ++I NGS+ ISEIP++LK +YKTVWEIKQK ++DMAADRG
Sbjct: 640 LLKDLFDRGLWDEDMKQQLIAHNGSIQYISEIPDDLKELYKTVWEIKQKNIIDMAADRGY 699
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
+IDQSQSLNI++++P KL+S+HFY W KG+KTG YYLRT+AA DAIKFTVDT V N
Sbjct: 700 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTHVAKNA 759
Query: 780 -KANRADN----------DVEANLAQVVC-SLK--NQEECMAC 808
K AD ++ N C S K N E+C+ C
Sbjct: 760 VKLKNADGVQITREVSRETIQLNQRYSKCVSFKSNNDEQCLMC 802
>gi|114635721|ref|XP_001159888.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 2 [Pan troglodytes]
gi|397465792|ref|XP_003804665.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 2 [Pan paniscus]
Length = 695
Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/714 (64%), Positives = 576/714 (80%), Gaps = 20/714 (2%)
Query: 98 IKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLL 157
++D+YNY N +GK + +VA +I++ N L+ AIIYDRDF ++YFGFKTLERSYLL
Sbjct: 1 MEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLL 60
Query: 158 KMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSS 217
K++ +V ERPQHMLMRVSVGIHK+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSS
Sbjct: 61 KINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSS 120
Query: 218 CFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQ 277
CFLL MKDDSIEGIYDTLK+CA+ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+
Sbjct: 121 CFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLR 180
Query: 278 VFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFAIYLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDL
Sbjct: 181 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 240
Query: 338 FMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQ 397
FM+RV + WSL CP++ GL + WG EFE LY+ YE++GR + V+ A++LW+ I+ SQ
Sbjct: 241 FMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQ 300
Query: 398 IETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVRE 457
ETGTPYML+KDSCNRKSNQQNLGTIK SNLCTEIVE++S +E AVCNLAS+AL YV
Sbjct: 301 TETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-- 358
Query: 458 KGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRH 517
+ +DF++LAEVTK++ NLNKIID+N+YP+ SN RH
Sbjct: 359 -----------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRH 401
Query: 518 RPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFG 577
RPIGIG+QGLAD FIL+ PFES EAQ LNK IFETIYY AL+AS +LA + GPYETY G
Sbjct: 402 RPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEG 461
Query: 578 SPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
SP+SKGILQ DMWN+TP+D WDW L+E I+K G+RNSLL+APMPTAST+QILGNNE E
Sbjct: 462 SPVSKGILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIE 521
Query: 638 PYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKA 697
PYTSNIYTRRVLSGEF +VN HLLKDLTE GLW +K +II NGS+ I EIP++LK
Sbjct: 522 PYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQ 581
Query: 698 IYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYY 757
+YKTVWEI QKT++ MAA+RG +IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYY
Sbjct: 582 LYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYY 641
Query: 758 LRTRAAADAIKFTVDTSVLNNEKANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
LRTR AA+ I+FT++ L +++ + + + N A +VCSL+N++EC+ CGS
Sbjct: 642 LRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 695
>gi|347600629|gb|AEP15116.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 88]
Length = 746
Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/754 (61%), Positives = 584/754 (77%), Gaps = 22/754 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKR+G E V+ DKI RLK LSYGL +H DP +V+ KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
ETA +T+ HPDY+ LA R+AVS+LHK+T N FS ++ +YNY N ++G+ + L+ADD+
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMESLYNYVNTKTGQWSPLIADDI 118
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
E I NA LD I Y++D ++D FG+KT+E+SYL +++ +VERPQHMLMRV++GIH
Sbjct: 119 IECIRSNAVVLDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A++TY L+S FTHATPT++NAGT PQ+SSCFLL MKDDSIEGI+DTLK CA+
Sbjct: 179 PDVDAAIETYKLLSARVFTHATPTMYNAGTRNPQMSSCFLLKMKDDSIEGIFDTLKNCAL 238
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+SIHN+RA SYI GT G SNG+VPML+VF++TARYVDQGGGKRKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYIRGTGGYSNGLVPMLRVFDNTARYVDQGGGKRKGAFAMY 298
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEP HADIFEFL+LRKN GKEE RARDLFYALWV D FM+RV WSLFCP + GL+
Sbjct: 299 LEPHHADIFEFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG ++ LY +YE EG+A+ I A+KLWF I++SQIETGTPYML+KDSCNRKSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESEGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLCTEI+E+++P+ETAVCNLASIALP +V++ GS F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPSFVKD-------------GS-------F 458
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +VT T NL+K+ID N+YPI RSN+RHRPIG+G+QGLAD F++L + F+S
Sbjct: 459 DHQHLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKMAFDS 518
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
P+A+ LNK+IFET+Y+ A+ AS +LA G Y TY GSP+SKG Q DMWN+TPS RW+W
Sbjct: 519 PDARVLNKEIFETMYFAAMTASCDLAKTKGKYSTYEGSPLSKGKFQFDMWNVTPSVRWNW 578
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR + K+G RNSL+ APMPTAST+QILGNNECFEP+TSN+Y+RRVLSGEF VVNK+L
Sbjct: 579 DTLRSNVKKHGTRNSLVTAPMPTASTAQILGNNECFEPFTSNLYSRRVLSGEFPVVNKYL 638
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+KDL++ GLW ++K II NGSV I PE+LK IYKTVWEI +TL+DMAADRG +
Sbjct: 639 VKDLSDRGLWGDSMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMAADRGAF 698
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTG 754
I QSQS N+ M QP KLTS+HFY W G+KTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|347482412|gb|AEO98353.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 203]
Length = 746
Score = 997 bits (2578), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/754 (61%), Positives = 584/754 (77%), Gaps = 22/754 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKR+G E V+ DKI RLK LSYGL +H DP +V+ KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
ETA +T+ HPDY+ LA R+AVS+LHK+T N FS ++ +YNY N ++G+ + L+ADD+
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMESLYNYVNTKTGQWSPLIADDI 118
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
E I NA D I Y++D ++D FG+KT+E+SYL +++ +VERPQHMLMRV++GIH
Sbjct: 119 IECIRSNAEVFDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A++TY L+SQ FTHATPT++NAGT PQ+SSCFLL MKDDSIEGI+DTLK CA+
Sbjct: 179 PDVDAAIETYKLLSQKKFTHATPTMYNAGTKNPQMSSCFLLKMKDDSIEGIFDTLKNCAL 238
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+SIHN+RA SYI GT G SNG+VPML+VF++TARYVDQGGGKRKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYIRGTGGYSNGLVPMLRVFDNTARYVDQGGGKRKGAFAMY 298
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEP HADIF+FL+LRKN GKEE RARDLFYALWV D FM+RV WSLFCP + GL+
Sbjct: 299 LEPHHADIFDFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG ++ LY +YE +G+A+ I A+KLWF I++SQIETGTPYML+KDSCNRKSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESDGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLCTEI+E+++P+ETAVCNLASIALP +V++ GS F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPAFVKD-------------GS-------F 458
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +VT T NL+K+ID N+YPI RSN+RHRPIG+G+QGLAD F++L + F+S
Sbjct: 459 DHQHLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKMAFDS 518
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+A+ LNK+IFET+Y+ A+ AS +LA G Y TY GSP+SKG Q DMWN+TPSDRW+W
Sbjct: 519 HDARVLNKEIFETMYFAAMTASCDLAKTKGKYSTYEGSPLSKGKFQFDMWNVTPSDRWNW 578
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR + K+G RNSLL+APMPTAST+QILGNNECFEPYTSN+Y+RRVLSGEF VVN HL
Sbjct: 579 DTLRSNVKKHGARNSLLLAPMPTASTAQILGNNECFEPYTSNLYSRRVLSGEFPVVNTHL 638
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+KDL++ GLW ++K II NGSV I PE+LK IYKTVWEI +TL+DM+ADRG +
Sbjct: 639 VKDLSDRGLWGDSMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMSADRGAF 698
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTG 754
I QSQS N+ M QP KLTS+HFY W G+KTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|332211481|ref|XP_003254847.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 3 [Nomascus leucogenys]
Length = 695
Score = 997 bits (2578), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/714 (64%), Positives = 576/714 (80%), Gaps = 20/714 (2%)
Query: 98 IKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLL 157
++D+YNY N +GK + +VA +I++ N L+ AIIYDRDF ++YFGFKTLERSYLL
Sbjct: 1 MEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLL 60
Query: 158 KMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSS 217
K++ +V ERPQHMLMRVSVGIHK+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSS
Sbjct: 61 KINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSS 120
Query: 218 CFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQ 277
CFLL MKDDSIEGIYDTLK+CA+ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+
Sbjct: 121 CFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLR 180
Query: 278 VFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFAIYLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDL
Sbjct: 181 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 240
Query: 338 FMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQ 397
FM+RV + WSL CP++ GL + WG EFE LY+ YE++GR + V+ A++LW+ I+ SQ
Sbjct: 241 FMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQ 300
Query: 398 IETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVRE 457
ETGTPYML+KDSCNRKSNQQNLGTIK SNLCTEIVE++S +E AVCNLAS+AL YV
Sbjct: 301 TETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-- 358
Query: 458 KGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRH 517
+ +DF++LAEVTK++ NLNKIID+N+YP+ SN RH
Sbjct: 359 -----------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRH 401
Query: 518 RPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFG 577
RPIGIG+QGLAD FIL+ PFES EAQ LNK IFETIYY AL+AS +LA + GPYETY G
Sbjct: 402 RPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEG 461
Query: 578 SPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
SP+SKGILQ DMWN+TP+D WDW L+E I+K G+RNSLL+APMPTAST+QILGNNE E
Sbjct: 462 SPVSKGILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIE 521
Query: 638 PYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKA 697
PYTSNIYTRRVLSGEF +VN HLLKDLTE GLW +K +II NGS+ I EIP++LK
Sbjct: 522 PYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQ 581
Query: 698 IYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYY 757
+YKTVWEI QKT++ MAA+RG +IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYY
Sbjct: 582 LYKTVWEISQKTVLRMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYY 641
Query: 758 LRTRAAADAIKFTVDTSVLNNEKANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
LRTR AA+ I+FT++ L +++ + + + N A +VCSL+N++EC+ CGS
Sbjct: 642 LRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 695
>gi|347481982|gb|AEO97968.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 84]
Length = 746
Score = 997 bits (2578), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/754 (61%), Positives = 585/754 (77%), Gaps = 22/754 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKR+G E V+ DKI RLK LSYGL +H DP +V+ KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
ETA +T+ HPDY+ LA R+AVS+LHK+T N FS ++ +YNY N ++G+ + L+ADD+
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMESLYNYVNTKTGQWSPLIADDI 118
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
E I NA LD I Y++D ++D FG+KT+E+SYL +++ +VERPQHMLMRV++GIH
Sbjct: 119 IECIRSNAVVLDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A++TY L+S FTHATPT++NAGT PQ+SSCFLL MKDDSIEGI+DTLK CA+
Sbjct: 179 PDVDAAIETYKLLSARVFTHATPTMYNAGTRNPQMSSCFLLKMKDDSIEGIFDTLKNCAL 238
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+SIHN+RA SYI GT G SNG+VPML+VF++TARYVDQGGGKRKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYIRGTGGYSNGLVPMLRVFDNTARYVDQGGGKRKGAFAMY 298
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEP HADIFEFL+LRKN GKEE RARDLFYALWV D FM+RV WSLFCP + GL+
Sbjct: 299 LEPHHADIFEFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG ++ LY +YE EG+A+ I A+KLWF I++SQIETGTPYML+KDSCNRKSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESEGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLCTEI+E+++P+ETAVCNLASIALP +V++ GS F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPAFVKD-------------GS-------F 458
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D ++L +VT T NL+K+ID N+YPI RSN+RHRPIG+G+QGLAD F++L + F+S
Sbjct: 459 DHQQLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKMAFDS 518
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
P+A+ LNK+IFET+Y+ A+ AS +LA G Y TY GSP+SKG Q D+WN+TPS RW+W
Sbjct: 519 PDARVLNKEIFETMYFAAMTASCDLAKTKGKYSTYEGSPLSKGKFQFDLWNVTPSVRWNW 578
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR + K+G RNSL+ APMPTAST+QILGNNECFEP+TSN+Y+RRVLSGEF VVNK+L
Sbjct: 579 DTLRSNVKKHGTRNSLVTAPMPTASTAQILGNNECFEPFTSNLYSRRVLSGEFPVVNKYL 638
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+KDL++ GLW ++K II NGSV I PE+LK IYKTVWEI +TL+DMAADRG +
Sbjct: 639 VKDLSDRGLWGDSMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMAADRGAF 698
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTG 754
I QSQS N+ M QP KLTS+HFY W G+KTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|195456500|ref|XP_002075166.1| GK23355 [Drosophila willistoni]
gi|194171251|gb|EDW86152.1| GK23355 [Drosophila willistoni]
Length = 768
Score = 997 bits (2577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/740 (62%), Positives = 582/740 (78%), Gaps = 22/740 (2%)
Query: 36 PVL---VAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN 92
PVL + +V G+Y GVTT +LD LAAE AA +T NH DYA+LA R+AVSNLHK TK
Sbjct: 27 PVLEVSITLQVINGLYCGVTTQELDNLAAEIAAGLTCNHADYAILAARIAVSNLHKETKK 86
Query: 93 SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLE 152
FSE +++Y++ NK + + +V+ Y I+ NA L+ A+IYDRDF ++YFGFKTLE
Sbjct: 87 VFSEVFEELYHHVNKETNNPSPMVSSYHYNIVKNNADRLNSAMIYDRDFGYNYFGFKTLE 146
Query: 153 RSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQ 212
RSYLLK++ +V ERPQHMLMRV++GIH +D D+A++TY+L+S+ +FTHA+PTLF A T +
Sbjct: 147 RSYLLKINGKVAERPQHMLMRVAIGIHGEDIDAAVETYNLLSERYFTHASPTLFAAATNR 206
Query: 213 PQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGI 272
PQLSSCFLL M DSIEGI+ T+++CA+ISKSAGGIGL++H IRA G+ I GTNG+SNG+
Sbjct: 207 PQLSSCFLLTMTSDSIEGIFKTVEQCAMISKSAGGIGLNVHCIRAKGTSICGTNGTSNGL 266
Query: 273 VPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYAL 332
VPML+VFN+ ARYVDQGGGKR GAFAIYLEPWH+DIFEFLDL++N GKEE RARDLFYAL
Sbjct: 267 VPMLRVFNNVARYVDQGGGKRPGAFAIYLEPWHSDIFEFLDLKRNTGKEEHRARDLFYAL 326
Query: 333 WVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFE 392
W+PDLFM+RV + WSL CP GL D WG +FE LY +YE+EG A ++ A+ LWF
Sbjct: 327 WIPDLFMKRVEANEDWSLMCPHKCPGLEDVWGDKFEELYVKYEKEGLANRIVKAQSLWFA 386
Query: 393 ILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALP 452
I+ SQ+ETG PYMLFKDSCN+KSNQQN+GTIK SNLCTE+VE+S+P+E AVCNLASIAL
Sbjct: 387 IIESQVETGNPYMLFKDSCNKKSNQQNVGTIKCSNLCTEVVEYSAPDEIAVCNLASIALN 446
Query: 453 RYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRR 512
+V + ++ +DF++L EVTKI+ +NLNKIIDVN+YP+ ++
Sbjct: 447 MFV-------------------TTDKTYDFKKLKEVTKIVAKNLNKIIDVNYYPLPEAKK 487
Query: 513 SNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPY 572
SNL+HRPIGIG+QGLAD IL+ LP+ES +A LN+ IFETIY+ AL+AS ELA GPY
Sbjct: 488 SNLKHRPIGIGVQGLADALILMRLPYESKQACLLNQQIFETIYFGALEASCELAQMYGPY 547
Query: 573 ETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
ET+ GSP S+GILQ DMWN PSD WDW+ L+ I ++G+RNSLLVAPMPTAST+QI+GN
Sbjct: 548 ETFKGSPASRGILQYDMWNKKPSDLWDWNKLKAAIKEHGIRNSLLVAPMPTASTAQIMGN 607
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
NE FEPYT+NIYTRRVLSGEF VVN HLL+DLTEL LW +K KI+ GS+ I IP
Sbjct: 608 NESFEPYTTNIYTRRVLSGEFQVVNHHLLRDLTELDLWDDDMKNKIVSSRGSIQNIEVIP 667
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ ++ +YKTVWEI K+ + MAADRG +IDQSQS NIH+ +P++GKLTS+HFY+W G+K
Sbjct: 668 QNVRDLYKTVWEISVKSTIKMAADRGAFIDQSQSFNIHVAEPNYGKLTSIHFYSWKSGLK 727
Query: 753 TGMYYLRTRAAADAIKFTVD 772
TGMYYLRT+ AA AI+FTVD
Sbjct: 728 TGMYYLRTKPAAHAIQFTVD 747
>gi|194382560|dbj|BAG64450.1| unnamed protein product [Homo sapiens]
Length = 695
Score = 996 bits (2575), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/714 (64%), Positives = 575/714 (80%), Gaps = 20/714 (2%)
Query: 98 IKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLL 157
++D+YNY N +GK + +VA +I++ N L+ AIIYDRDF ++YFGFKTLERSYLL
Sbjct: 1 MEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLL 60
Query: 158 KMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSS 217
K++ +V ERPQHMLMRVSVGIHK+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSS
Sbjct: 61 KINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSS 120
Query: 218 CFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQ 277
CFLL MKDDSIEGIYDTLK+CA+ISKSAGGIG+++ IRA+GSYI GTNG+ NG+VPML+
Sbjct: 121 CFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNPNGLVPMLR 180
Query: 278 VFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFAIYLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDL
Sbjct: 181 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 240
Query: 338 FMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQ 397
FM+RV + WSL CP++ GL + WG EFE LY+ YE++GR + V+ A++LW+ I+ SQ
Sbjct: 241 FMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQ 300
Query: 398 IETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVRE 457
ETGTPYML+KDSCNRKSNQQNLGTIK SNLCTEIVE++S +E AVCNLAS+AL YV
Sbjct: 301 TETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-- 358
Query: 458 KGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRH 517
+ +DF++LAEVTK++ NLNKIID+N+YP+ SN RH
Sbjct: 359 -----------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRH 401
Query: 518 RPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFG 577
RPIGIG+QGLAD FIL+ PFES EAQ LNK IFETIYY AL+AS +LA + GPYETY G
Sbjct: 402 RPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEG 461
Query: 578 SPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
SP+SKGILQ DMWN+TP+D WDW L+E I+K G+RNSLL+APMPTAST+QILGNNE E
Sbjct: 462 SPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIE 521
Query: 638 PYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKA 697
PYTSNIYTRRVLSGEF +VN HLLKDLTE GLW +K +II NGS+ I EIP++LK
Sbjct: 522 PYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQ 581
Query: 698 IYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYY 757
+YKTVWEI QKT++ MAA+RG +IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYY
Sbjct: 582 LYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYY 641
Query: 758 LRTRAAADAIKFTVDTSVLNNEKANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
LRTR AA+ I+FT++ L +++ + + + N A +VCSL+N++EC+ CGS
Sbjct: 642 LRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 695
>gi|347600972|gb|AEP15458.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 207]
gi|347601397|gb|AEP15882.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 208]
gi|357972865|gb|AET98138.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 201]
Length = 746
Score = 994 bits (2570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/754 (61%), Positives = 582/754 (77%), Gaps = 22/754 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKR+G E V+ DKI RLK LSYGL +H DP +V+ KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
ETA +T+ HPDY+ LA R+AVS+LHK+T N FS ++ +YNY N ++G+ + L+ADD+
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMESLYNYVNTKTGQWSPLIADDI 118
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
E I NA LD I Y++D ++D FG+KT+E+SYL +++ +VERPQHMLMRV++GIH
Sbjct: 119 IECIRSNAVVLDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A++TY L+SQ FTHATPT++NAGT PQ+SSCFLL MKDDSIEGI+DT+K CA+
Sbjct: 179 PDVDAAIETYKLLSQKKFTHATPTMYNAGTKNPQMSSCFLLKMKDDSIEGIFDTIKNCAL 238
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+SIHN+RA SYI GT G SNG+VPML+VF+ TARYVDQGGG+RKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYISGTGGYSNGLVPMLRVFDSTARYVDQGGGRRKGAFAMY 298
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEP HADIFEFL+LRKN GKEE RARDLFYALWV D FM+RV WSLFCP + GL+
Sbjct: 299 LEPHHADIFEFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG ++ LY +YE EG+A+ I A+KLWF I++SQIETGTPYML+KDSCNRKSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESEGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLCTEI+E+++P+ETAVCNLASIALP +V++ GS F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPAFVKD-------------GS-------F 458
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +VT T NL+K+ID N+YPI RSN+RHRPIG+G+QGLAD F++L + F+S
Sbjct: 459 DHQHLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKMAFDS 518
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
P+A+ LNK+IFET+Y+ A+ AS ++A G Y TY GSP+S G Q DMWN+TPSDRWDW
Sbjct: 519 PDARVLNKEIFETMYFAAMTASCDIAKTKGRYSTYEGSPLSNGKFQFDMWNVTPSDRWDW 578
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++LR + K G RNSLL APMPTAST+QILG NECFEP+TSN+Y+RRVLSGEF VVNK+L
Sbjct: 579 NTLRSNVKKYGARNSLLTAPMPTASTAQILGFNECFEPFTSNLYSRRVLSGEFPVVNKYL 638
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+KDL++ GLW +K II NGSV I PE+LK IYKTVWEI +TL+DM+ADRG +
Sbjct: 639 VKDLSDRGLWGDNMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMSADRGAF 698
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTG 754
I QSQS N+ M QP KLTS+HFY W G+KTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|66475480|ref|XP_627556.1| ribonucleotide-diphosphate reductase large chain; RIR1; c-terminal
PFL-like glycyl radical enzymes-like fold
[Cryptosporidium parvum Iowa II]
gi|46229284|gb|EAK90133.1| ribonucleotide-diphosphate reductase large chain; RIR1; c-terminal
PFL-like glycyl radical enzymes-like fold
[Cryptosporidium parvum Iowa II]
Length = 804
Score = 994 bits (2569), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/823 (58%), Positives = 613/823 (74%), Gaps = 37/823 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+ R G +EPV FD+I +R+ KLSYGL DP V Q V G+Y G+ T++LDELA
Sbjct: 2 MYVVNRKGEEEPVSFDQILSRITKLSYGL-HPLVDPARVTQAVINGLYSGIKTSELDELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
++T A M H D++ LA R++ SNLHK T + + +YN+ + + G A L++ V
Sbjct: 61 SQTCAYMAATHNDFSKLAARISTSNLHKNTSSDIGDVASQLYNFKDNQ-GCPAPLISKPV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ IM+N ++ I + +DF++DYF FKTLERSYLLK+D++VVERPQH+LMRVS GIH
Sbjct: 120 YDFIMENRERINSKIDFSKDFEYDYFAFKTLERSYLLKIDNKVVERPQHLLMRVSCGIHC 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++AL+TY L+SQ +FTHATPTLFN+GTP+PQ+SSCFLL + +DSI GI+DTL KCA
Sbjct: 180 GDIEAALETYELLSQKYFTHATPTLFNSGTPRPQMSSCFLLRIPEDSINGIFDTLTKCAN 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+G+++ NIR +GSYI GTNG SNG++PML+V+NDTARY+DQGGGKRKGA AIY
Sbjct: 240 ISKTAGGLGVAVSNIRGTGSYIRGTNGRSNGLIPMLRVYNDTARYIDQGGGKRKGAIAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+ EF+++RKN GKEE R RDLF ALWVPDLFMERV D W+L CP + GL
Sbjct: 300 LEPWHVDVVEFIEIRKNHGKEEMRCRDLFPALWVPDLFMERVEKDQDWTLMCPDECRGLQ 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG +F+ LY +YE++GR + + A+KLWF IL +QIETGTP++ +KD+ N KSNQ+NL
Sbjct: 360 DVWGDDFKKLYEEYEKQGRGRKTMKAQKLWFLILQAQIETGTPFICYKDAANSKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI SSNLCTEI+E++S +E AVCNLASI LP++V D N+ F
Sbjct: 420 GTIVSSNLCTEIIEYTSTDEVAVCNLASIGLPKFV------------------DKNNKTF 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTK+IT NLNK+IDV +Y ++ ++SNLRHRP+GIGIQGLAD F++L +P+ES
Sbjct: 462 DFDKLKEVTKVITRNLNKLIDVGYYSLKECKKSNLRHRPLGIGIQGLADCFMMLRMPYES 521
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
A++LNK IFE IYY AL AS ELA K GPYETY GSP SKGILQ DMW +TP S D
Sbjct: 522 EGAKKLNKQIFEVIYYAALDASCELAEKYGPYETYSGSPASKGILQFDMWGVTPDSGLCD 581
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L++ ISK+G+RNSLL++PMPTASTSQILGNNE FEP+TSNIY RRVLSGEF VVN H
Sbjct: 582 WDLLKDRISKHGIRNSLLISPMPTASTSQILGNNESFEPFTSNIYHRRVLSGEFFVVNPH 641
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL DL ELGLW LK II NGS+ I IPE+++ +YKTVWEIKQKT++DMAADRG
Sbjct: 642 LLNDLLELGLWDDRLKQNIIANNGSIQNILTIPEDIRELYKTVWEIKQKTVIDMAADRGP 701
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
Y+ QSQSLNIHME + KL+S+HFY W KG+KTG+YYLRT++A I+FTVD +L +E
Sbjct: 702 YVCQSQSLNIHMENANFAKLSSMHFYGWKKGLKTGIYYLRTQSATRPIQFTVDQQLLKSE 761
Query: 780 KANRADNDVEANLAQ---------VVCSL-----KNQEECMAC 808
+ + +E N Q + C L K+ EECM C
Sbjct: 762 --TKEKDSLETNKRQALEPEAQKLIACPLRPTNMKDDEECMMC 802
>gi|18266787|sp|O61065.2|RIR1_CRYPV RecName: Full=Ribonucleoside-diphosphate reductase large chain;
AltName: Full=Ribonucleotide reductase R1 subunit
gi|8365757|gb|AAC12280.2| ribonucleotide reductase R1 subunit [Cryptosporidium parvum]
gi|32398776|emb|CAD98486.1| ribonucleoside-diphosphate reductase large chain [Cryptosporidium
parvum]
Length = 803
Score = 994 bits (2569), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/823 (58%), Positives = 613/823 (74%), Gaps = 37/823 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+ R G +EPV FD+I +R+ KLSYGL DP V Q V G+Y G+ T++LDELA
Sbjct: 1 MYVVNRKGEEEPVSFDQILSRITKLSYGLHP-LVDPARVTQAVINGLYSGIKTSELDELA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
++T A M H D++ LA R++ SNLHK T + + +YN+ + + G A L++ V
Sbjct: 60 SQTCAYMAATHNDFSKLAARISTSNLHKNTSSDIGDVASQLYNFKDNQ-GCPAPLISKPV 118
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ IM+N ++ I + +DF++DYF FKTLERSYLLK+D++VVERPQH+LMRVS GIH
Sbjct: 119 YDFIMENRERINSKIDFSKDFEYDYFAFKTLERSYLLKIDNKVVERPQHLLMRVSCGIHC 178
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++AL+TY L+SQ +FTHATPTLFN+GTP+PQ+SSCFLL + +DSI GI+DTL KCA
Sbjct: 179 GDIEAALETYELLSQKYFTHATPTLFNSGTPRPQMSSCFLLRIPEDSINGIFDTLTKCAN 238
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+G+++ NIR +GSYI GTNG SNG++PML+V+NDTARY+DQGGGKRKGA AIY
Sbjct: 239 ISKTAGGLGVAVSNIRGTGSYIRGTNGRSNGLIPMLRVYNDTARYIDQGGGKRKGAIAIY 298
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+ EF+++RKN GKEE R RDLF ALWVPDLFMERV D W+L CP + GL
Sbjct: 299 LEPWHVDVVEFIEIRKNHGKEEMRCRDLFPALWVPDLFMERVEKDQDWTLMCPDECRGLQ 358
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG +F+ LY +YE++GR + + A+KLWF IL +QIETGTP++ +KD+ N KSNQ+NL
Sbjct: 359 DVWGDDFKKLYEEYEKQGRGRKTMKAQKLWFLILQAQIETGTPFICYKDAANSKSNQKNL 418
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI SSNLCTEI+E++S +E AVCNLASI LP++V D N+ F
Sbjct: 419 GTIVSSNLCTEIIEYTSTDEVAVCNLASIGLPKFV------------------DKNNKTF 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EVTK+IT NLNK+IDV +Y ++ ++SNLRHRP+GIGIQGLAD F++L +P+ES
Sbjct: 461 DFDKLKEVTKVITRNLNKLIDVGYYSLKECKKSNLRHRPLGIGIQGLADCFMMLRMPYES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
A++LNK IFE IYY AL AS ELA K GPYETY GSP SKGILQ DMW +TP S D
Sbjct: 521 EGAKKLNKQIFEVIYYAALDASCELAEKYGPYETYSGSPASKGILQFDMWGVTPDSGLCD 580
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L++ ISK+G+RNSLL++PMPTASTSQILGNNE FEP+TSNIY RRVLSGEF VVN H
Sbjct: 581 WDLLKDRISKHGIRNSLLISPMPTASTSQILGNNESFEPFTSNIYHRRVLSGEFFVVNPH 640
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL DL ELGLW LK II NGS+ I IPE+++ +YKTVWEIKQKT++DMAADRG
Sbjct: 641 LLNDLLELGLWDDRLKQNIIANNGSIQNILTIPEDIRELYKTVWEIKQKTVIDMAADRGP 700
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
Y+ QSQSLNIHME + KL+S+HFY W KG+KTG+YYLRT++A I+FTVD +L +E
Sbjct: 701 YVCQSQSLNIHMENANFAKLSSMHFYGWKKGLKTGIYYLRTQSATRPIQFTVDQQLLKSE 760
Query: 780 KANRADNDVEANLAQ---------VVCSL-----KNQEECMAC 808
+ + +E N Q + C L K+ EECM C
Sbjct: 761 --TKEKDSLETNKRQALEPEAQKLIACPLRPTNMKDDEECMMC 801
>gi|2244677|emb|CAA67423.1| ribonucleotide reductase [Spodoptera littoralis NPV]
Length = 781
Score = 993 bits (2568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/770 (60%), Positives = 590/770 (76%), Gaps = 21/770 (2%)
Query: 5 KRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETA 64
KRDGRKE V KI R++K YGL +P + ++V G+Y GVTT +LD L AETA
Sbjct: 4 KRDGRKEDVSVRKIKYRIEKQCYGLDMYFVNPASLTRRVVQGIYPGVTTVELDNLIAETA 63
Query: 65 AAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEII 124
A+MT++H DY+LLA R+AVSNLHK TK+ F I DMY ++++G +++D Y II
Sbjct: 64 ASMTIDHSDYSLLAARLAVSNLHKETKDLFFNVIVDMYEAIDQKTGAATPMISDFHYGII 123
Query: 125 MKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTD 184
NA L+ AI++DRDF++DYFGFKT++RSYL K++ VERPQ+M+MRV++GIH D D
Sbjct: 124 AANADRLNSAIMHDRDFNYDYFGFKTMQRSYLFKINGITVERPQYMMMRVAIGIHGRDID 183
Query: 185 SALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKS 244
+A++TY+LMS +FTHA+PTLF+A TP+ Q+SSCFL+ +K+DSIEGIYDTLK+CA+ISKS
Sbjct: 184 AAIETYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVAIKEDSIEGIYDTLKQCAMISKS 243
Query: 245 AGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPW 304
GGIG +HN+RA GS + G +G++NG+VPML+V+N+TARYV+QGG KR GAFA+Y+EPW
Sbjct: 244 GGGIGFHVHNVRAKGSSVAGVDGAANGLVPMLRVYNNTARYVNQGGNKRPGAFAVYVEPW 303
Query: 305 HADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWG 364
HAD+F+FLDL+KN GKEE RAR+LFYALW+PDLFM RV D WSL CP + GLA
Sbjct: 304 HADVFDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVETDAMWSLMCPMQSPGLAIVTV 363
Query: 365 IEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIK 424
EFE LY +YE++GR +SA+ LW I+ +Q+ETGTPYML+KDSCNRKSNQ NLGTIK
Sbjct: 364 FEFEALYEKYEKQGRYVKRVSAQTLWRAIIEAQVETGTPYMLYKDSCNRKSNQSNLGTIK 423
Query: 425 SSNLCTEIVEFSSPEETAVCNLASIALPRYVR-EKGVPVQSNVSKLVGSRDSKNRLFDFE 483
SNLCTEIVE++S +E AVCNLASIA+ ++V + GV +DFE
Sbjct: 424 CSNLCTEIVEYTSKDEVAVCNLASIAVNKFVAPQPGV-------------------YDFE 464
Query: 484 RLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEA 543
RL E+TK NLN+IID N P+ RSN R+RPIGIG+QG+AD F+ + +PFES A
Sbjct: 465 RLKEITKSCDRNLNRIIDANQCPLREAERSNQRNRPIGIGVQGMADAFVTMRMPFESDAA 524
Query: 544 QQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN-ITPSDRWDWSS 602
+LNK IFETI+Y AL+A+ ELA KDGPYETY GSP S+G LQ DMWN TPS+ WDWS
Sbjct: 525 AELNKKIFETIFYGALEANCELAAKDGPYETYKGSPASRGELQYDMWNGATPSNLWDWSL 584
Query: 603 LREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLK 662
L+ ISK G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL+K
Sbjct: 585 LKSKISKYGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHLVK 644
Query: 663 DLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYID 722
DL +GLW+ +K I+Y NGSV I IP E++ +YKTVWE+ +T++ MAADRG +ID
Sbjct: 645 DLAAIGLWNDTMKNLIMYNNGSVQNIESIPFEIRQLYKTVWEMSMRTMIRMAADRGAFID 704
Query: 723 QSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
QSQS N++M +P +GKLTS+HFYAW G+KTGMYYLRT+ A ++I+FTVD
Sbjct: 705 QSQSFNVYMAEPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAVNSIQFTVD 754
>gi|73852902|ref|YP_294186.1| putative ribonucleoside-diphosphate reductase protein [Emiliania
huxleyi virus 86]
gi|72415618|emb|CAI65855.1| putative ribonucleoside-diphosphate reductase protein [Emiliania
huxleyi virus 86]
Length = 746
Score = 993 bits (2567), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/754 (61%), Positives = 580/754 (76%), Gaps = 22/754 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKR+G E V+ DKI RLK LSYGL +H DP +V+ KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
ETA +T+ HPDY+ LA R+AVS+LHK+T N FS + +YNY N ++GK + L+ADD+
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMDSLYNYVNTKTGKWSPLIADDI 118
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
E I NA D I Y++D ++D FG+KT+E+SYL +++ +VERPQHMLMRV++GIH
Sbjct: 119 IECIRSNAEVFDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A++TY L+S FTHATPT++NAGT PQ+SSCFLL MKDDSIEGI+DTLK CA+
Sbjct: 179 PDVDAAIETYKLLSARVFTHATPTMYNAGTRNPQMSSCFLLKMKDDSIEGIFDTLKNCAL 238
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+SIHN+RA SYI GT G SNG+VPML+VF++TARYVDQGGGKRKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYIRGTGGYSNGLVPMLRVFDNTARYVDQGGGKRKGAFAMY 298
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEP HADIFEFL+LRKN GKEE RARDLFYALWV D FM+RV WSLFCP + GL+
Sbjct: 299 LEPHHADIFEFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG ++ LY +YE EG+A+ I A+KLWF I++SQIETGTPYML+KDSCNRKSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESEGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLCTEI+E+++P+ETAVCNLASIALP +V K+ F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPAFV--------------------KDGTF 458
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +VT T NL+K+ID N+YPI RSN+RHRPIG+G+QGLAD F++L + F+S
Sbjct: 459 DHQHLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKMAFDS 518
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
P+A+ LNK+IFET+Y+ A+ AS +LA G Y TY GSP+S+G Q D+WN+TPS RW+W
Sbjct: 519 PDARVLNKEIFETMYFAAMTASCDLAKTKGKYSTYEGSPLSQGKFQFDLWNVTPSVRWNW 578
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR + K+G RNSL+ APMPTAST+QILGNNECFEP+TSN+Y+RRVLSGEF VVNK+L
Sbjct: 579 DTLRSNVKKHGTRNSLVTAPMPTASTAQILGNNECFEPFTSNLYSRRVLSGEFPVVNKYL 638
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+KDL++ GLW ++K II NGSV I PE+LK IYKTVWEI +TL+DMAADRG +
Sbjct: 639 VKDLSDRGLWGDSMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMAADRGAF 698
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTG 754
I QSQS N+ M QP KLTS+HFY W G+KTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|283481642|emb|CAZ69758.1| putative ribonucleoside-diphosphate reductase protein [Emiliania
huxleyi virus 99B1]
Length = 746
Score = 993 bits (2566), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/754 (61%), Positives = 581/754 (77%), Gaps = 22/754 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKR+G E V+ DKI RLK LSYGL +H DP +V+ KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
ETA +T+ HPDY+ LA R+AVS+LHK+T N FS + +YNY N ++G+ + L+ADD+
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMDSLYNYVNTKTGQWSPLIADDI 118
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
E I NA D I Y++D ++D FG+KT+E+SYL +++ +VERPQHMLMRV++GIH
Sbjct: 119 IECIRSNADVFDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A++TY L+SQ FTHATPT++NAGT PQ+SSCFLL MKDDSIEGI+DT+K CA+
Sbjct: 179 PDVDAAIETYKLLSQKKFTHATPTMYNAGTKNPQMSSCFLLKMKDDSIEGIFDTIKNCAL 238
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+SIHN+RA SYI GT G SNG+VPML+VF+ TARYVDQGGG+RKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYISGTGGYSNGLVPMLRVFDSTARYVDQGGGRRKGAFAMY 298
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEP HADIFEFL+LRKN GKEE RARDLFYALWV D FM+RV WSLFCP + GL+
Sbjct: 299 LEPHHADIFEFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG ++ LY +YE EG+A+ I A+KLWF I++SQIETGTPYML+KDSCNRKSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESEGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLCTEI+E+++P+ETAVCNLASIALP +V++ GS F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPSFVKD-------------GS-------F 458
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D + L +VT T NL+K+ID N+YPI RSN+RHRPIG+G+QGLAD F++L + F+S
Sbjct: 459 DHQHLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKISFDS 518
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
P+A+ LNK+IFET+Y+ A+ AS +LA G Y TY GSP+S G Q DMWN+TPS RW+W
Sbjct: 519 PDARVLNKEIFETMYFAAMTASCDLAKTKGKYSTYEGSPLSNGKFQFDMWNVTPSVRWNW 578
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR + K+G RNSL+ APMPTAST+QILGNNECFEP+TSN+Y+RRVLSGEF VVNK+L
Sbjct: 579 DTLRSNVKKHGTRNSLVTAPMPTASTAQILGNNECFEPFTSNLYSRRVLSGEFPVVNKYL 638
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+KDL++ GLW ++K II NGSV I PE+LK IYKTVWEI +TL+DMAADRG +
Sbjct: 639 VKDLSDRGLWGDSMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMAADRGAF 698
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTG 754
I QSQS N+ M QP KLTS+HFY W G+KTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|156541405|ref|XP_001600772.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Nasonia vitripennis]
Length = 797
Score = 992 bits (2565), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/817 (57%), Positives = 604/817 (73%), Gaps = 36/817 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KR+G K+ V FDKIT R++KL +GL+ ++ DP+ + Q V G+Y GV T +LD LA
Sbjct: 7 MHVLKRNGFKQEVNFDKITQRIRKLCHGLNMDYIDPLAITQCVINGLYPGVKTVELDNLA 66
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA MT HPDYA+LA R+ +S+LHK + +FSE + D+Y + + + +++++
Sbjct: 67 AEIAATMTTKHPDYAILAARIVISSLHKENRKTFSEVMDDLYKVIDPITKEHKPMISEEY 126
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
II K+ L+ AI YDRDF F+YFGFKTLE+SYL +++ +VVERPQ MLMRV+V +HK
Sbjct: 127 NNIIQKHKDRLNSAIDYDRDFVFNYFGFKTLEKSYLFRINGQVVERPQDMLMRVAVALHK 186
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQP------QLSSCFLLCMKDDSIEGIYDT 234
+D + ++TY+ S+ +FTHA+PTLF P S CF+L M +DSIEGI++T
Sbjct: 187 EDLEKVIETYNYTSERYFTHASPTLFFCMYYTPTNVQVKNTSDCFILTMIEDSIEGIFET 246
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
LK+CAIISKSAGGIG+S+HNIRA G+ I NG +NG+VPM++VFN+T R++DQGG KR
Sbjct: 247 LKRCAIISKSAGGIGISVHNIRAKGTAIASNNGFANGLVPMIRVFNNTVRFIDQGGNKRP 306
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GAFA+YLEPWHADIFEFLDL+KN GKEE RAR+LFYALW+PDLFM+RV D+ KWSL CP
Sbjct: 307 GAFALYLEPWHADIFEFLDLKKNIGKEEYRARELFYALWIPDLFMQRVLDNEKWSLMCPH 366
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
+ GL D WG EF LY +YEEE R K I AR LW IL +Q+ETGTPYML+KD CNRK
Sbjct: 367 ECPGLPDVWGDEFNKLYIKYEEEKRYKRQIVARDLWTAILKAQVETGTPYMLYKDHCNRK 426
Query: 415 SNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRD 474
SNQQNLGTIKSSNLCTEI+++SSP E AVCNLASIA+ +V D
Sbjct: 427 SNQQNLGTIKSSNLCTEIIQYSSPNEVAVCNLASIAVNMFV------------------D 468
Query: 475 SKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILL 534
+ + ++F +L EV K + +NL+KIID+NHYP+ +SNL HRP+GIG+QGLAD F+L+
Sbjct: 469 VETQYYNFLKLKEVVKTVAKNLDKIIDLNHYPLIEAEKSNLMHRPVGIGVQGLADAFLLM 528
Query: 535 GLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP 594
PFES EAQQLN IFET+Y+ AL+AS ELA ++GPY +Y GSP+SKGILQ DMWN+TP
Sbjct: 529 RYPFESKEAQQLNIQIFETLYFGALEASCELAKENGPYSSYNGSPVSKGILQYDMWNVTP 588
Query: 595 SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFI 654
++ WDW++L+ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEFI
Sbjct: 589 TNLWDWAALKLKIAKYGVRNSLLLAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFI 648
Query: 655 VVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMA 714
+VN HLL DLT+ LW +K +II NGS+ + I ++LK +YKTVWEI QK ++ MA
Sbjct: 649 IVNPHLLNDLTKRNLWDDEMKNEIIANNGSIQNVGHITQDLKELYKTVWEIPQKIILKMA 708
Query: 715 ADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
ADRG +IDQSQS+N+HM +P KLTS+HFY W G+KTGMYYLRT+ AA+A++FTV+ S
Sbjct: 709 ADRGAFIDQSQSVNVHMAKPTTEKLTSMHFYGWKAGLKTGMYYLRTKPAANALQFTVNKS 768
Query: 775 VLN---NEKANRADNDVEANLAQVVCSLKNQEECMAC 808
+L E+ N + N ++ CM C
Sbjct: 769 LLRPHATEEVKEKSNTIMEN---------KEDACMMC 796
>gi|403262128|ref|XP_003923447.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 2 [Saimiri boliviensis boliviensis]
Length = 695
Score = 992 bits (2565), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/714 (64%), Positives = 574/714 (80%), Gaps = 20/714 (2%)
Query: 98 IKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLL 157
++D+YNY N +GK + +VA +I++ N L+ AIIYDRDF ++YFGFKTLERSYLL
Sbjct: 1 MEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLL 60
Query: 158 KMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSS 217
K++ +V ERPQHMLMRVSVGIHK+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSS
Sbjct: 61 KINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSS 120
Query: 218 CFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQ 277
CFLL MKDDSIEGIYDTLK+CA+ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+
Sbjct: 121 CFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLR 180
Query: 278 VFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFAIYLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDL
Sbjct: 181 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 240
Query: 338 FMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQ 397
FM+RV + WSL CP++ GL + WG EFE LY YE++ R + V+ A++LW+ I+ SQ
Sbjct: 241 FMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYESYEKQRRVRKVVKAQQLWYAIIESQ 300
Query: 398 IETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVRE 457
ETGTPYML+KDSCNRKSNQQNLGTIK SNLCTEIVE++S +E AVCNLAS+AL YV
Sbjct: 301 TETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-- 358
Query: 458 KGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRH 517
+ +DF++LAEVTK+I NLNKIID+N+YP+ SN RH
Sbjct: 359 -----------------TSEHTYDFQKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRH 401
Query: 518 RPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFG 577
RPIGIG+QGLAD FIL+ PFES EAQ LNK IFETIYY AL+AS +LA + GPYETY G
Sbjct: 402 RPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEG 461
Query: 578 SPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
SP+SKGILQ DMWN+TP+D WDW L+E I+K G+RNSLL+APMPTAST+QILGNNE E
Sbjct: 462 SPVSKGILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIE 521
Query: 638 PYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKA 697
PYTSNIYTRRVLSGEF +VN HLLKDLTE GLW +K +II NGS+ I EIP++LK
Sbjct: 522 PYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQ 581
Query: 698 IYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYY 757
+YKTVWEI QKT++ MAA+RG +IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYY
Sbjct: 582 LYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYY 641
Query: 758 LRTRAAADAIKFTVDTSVLNNEKANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
LRTR AA+ I+FT++ + +++ + + + N A +VCSL+N++EC+ CGS
Sbjct: 642 LRTRPAANPIQFTLNKEKIKDKEKISKEEEEKERNTAAMVCSLENRDECLMCGS 695
>gi|209878422|ref|XP_002140652.1| ribonucleoside-diphosphate reductase, large subunit
[Cryptosporidium muris RN66]
gi|209556258|gb|EEA06303.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Cryptosporidium muris RN66]
Length = 809
Score = 992 bits (2564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/823 (58%), Positives = 611/823 (74%), Gaps = 35/823 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVI R G++EPV FD+I +R+ KLSYGL DP VAQ V G+Y G+ T++LDELA
Sbjct: 5 MYVINRRGKEEPVSFDQILSRISKLSYGL-HPLVDPARVAQAVINGMYSGIKTSELDELA 63
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
++T A M +HPD++ LA R+++SNLHK T + E + ++ + G A L++ V
Sbjct: 64 SQTCAYMAASHPDFSKLAARISISNLHKNTHSDIFEVANQLISFKDVH-GNPAPLLSQTV 122
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE I++N L+ I + RDF++DYF FKTLERSYLL++D ++VERPQH+LMRVS GIH
Sbjct: 123 YEFIIENKDRLNSVIDFSRDFEYDYFAFKTLERSYLLRVDDKIVERPQHLLMRVSCGIHY 182
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+ D+A++TY L+SQ +FTHATPTLFNAGT +PQ+SSCF+L M DDSI+GI+DTLKKCA
Sbjct: 183 GNIDAAIETYELLSQKYFTHATPTLFNAGTLRPQMSSCFILKMSDDSIDGIFDTLKKCAN 242
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGG+G++I NIRA+GSYI GTNG SNG++PML+V+NDTARYVDQGGGKRKGA A+Y
Sbjct: 243 ISKTAGGLGVAISNIRAAGSYIRGTNGRSNGLIPMLRVYNDTARYVDQGGGKRKGALAVY 302
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI EF+++RKN GKEE R RD+F ALW+PDLFMERV D W+L CP + G+
Sbjct: 303 LEPWHADILEFIEIRKNHGKEEMRCRDIFPALWIPDLFMERVEKDANWTLMCPDECPGMQ 362
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG +F+ LY YE+EGR + I A+ LWF +L SQIETGTP++ +KD+ NRKSNQQNL
Sbjct: 363 DVWGDQFKELYEHYEKEGRGRKTIKAQSLWFALLQSQIETGTPFICYKDAANRKSNQQNL 422
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++S +E AVCNLASI LPR+V D +N+ F
Sbjct: 423 GTIKSSNLCTEIMEYTSSDEVAVCNLASIGLPRFV------------------DRENKKF 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L EV K+ NLNK+ID +YPI RRSNLRHRP+G+G+QGLAD F++L P+ES
Sbjct: 465 DFKKLYEVVKVAIRNLNKVIDRGYYPIPECRRSNLRHRPLGLGVQGLADCFMILRYPYES 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD-RWD 599
+A++LN +IFETIYY AL AS ELA K GPYET+ GSP S+G+LQ D+WN+ PS W+
Sbjct: 525 KDARKLNIEIFETIYYAALDASCELAEKYGPYETFQGSPASRGLLQFDLWNVQPSSGLWN 584
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L+E I+K G+RNSLLVAPMPTASTSQ+LGNNE FEP+TSNIY RRVLSGEF VVN H
Sbjct: 585 WDLLKEKIAKYGLRNSLLVAPMPTASTSQLLGNNESFEPFTSNIYHRRVLSGEFFVVNPH 644
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL DL ELGLW LK II NGSV I IP +++ +YKTVWEI+QK ++DMAADRG
Sbjct: 645 LLNDLLELGLWDERLKQNIIANNGSVQNIESIPRDIRDLYKTVWEIRQKAVIDMAADRGP 704
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YI QSQSLNI++ ++ KL+S+HFY W KG+KTG YYLRT++AA+ I+FT+D +L +
Sbjct: 705 YICQSQSLNIYIANANYAKLSSMHFYGWKKGLKTGSYYLRTQSAANPIQFTIDQQLLKST 764
Query: 780 KANRADNDVEANLAQ----------VVCSLK----NQEECMAC 808
+ D + Q + C L+ EEC+ C
Sbjct: 765 ADKNKEQDAKRPALQNSSQGDGRSVMACPLRPANLQGEECLMC 807
>gi|187903102|ref|YP_001883393.1| ribonucleoside diphosphate reductase large subunit, rr1 [Musca
domestica salivary gland hypertrophy virus]
gi|187384751|gb|ACD03524.1| ribonucleoside diphosphate reductase large subunit, rr1 [Musca
domestica salivary gland hypertrophy virus]
Length = 785
Score = 990 bits (2560), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/774 (58%), Positives = 593/774 (76%), Gaps = 25/774 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
++V KR G + + FDKI R++ L Y L+ ++ P + KV AG+Y GVTT +LD LA
Sbjct: 8 LFVTKRGGFVQDIVFDKIRKRIESLCYNLNADYVHPSTIVVKVVAGLYPGVTTAELDTLA 67
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA+M HPDY +LA R+A+SN+HK T +SF+ T+K++Y A L++
Sbjct: 68 AETAASMMTLHPDYGVLAARIAISNMHKQTDDSFARTMKELY---------AAGLISMFH 118
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+++ ++ LD AI++ DF++ YFG KTLERSYL+ + R+VERPQ++LMR ++GIH
Sbjct: 119 YDVVCRHGRTLDEAIVHANDFNYSYFGIKTLERSYLMHIKDRLVERPQYLLMRCALGIHG 178
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
++ D+ ++TY+ MS+H+FTHATPTLF+A TP+PQLSSC+LL +K DSI+GI+ T+ CA
Sbjct: 179 ENIDAVIETYNYMSRHYFTHATPTLFSAATPKPQLSSCYLLTIKGDSIDGIFRTVADCAA 238
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL++H+IRA GS I GTNG SNG+VPML+VFN+ ARYVDQGGGKR G+FAIY
Sbjct: 239 ISKTAGGIGLNVHDIRARGSPIDGTNGKSNGLVPMLRVFNNVARYVDQGGGKRMGSFAIY 298
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN G EE RARDLFYALW+PDLFM RV DG WSL CP L+
Sbjct: 299 LEPWHADIFEFLDLRKNHGIEEQRARDLFYALWIPDLFMRRVEQDGDWSLMCPHKCPCLS 358
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG FEHLY YE +GRA + AR LW I+ SQ+ETGTPYM++KD+CNRKSNQQNL
Sbjct: 359 EVWGESFEHLYEHYERKGRAVRTVKARALWHAIIESQVETGTPYMMYKDACNRKSNQQNL 418
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLCTEIVE+++P+E AVCNLAS+ALP++V V + + F
Sbjct: 419 GTIRCSNLCTEIVEYTAPDEIAVCNLASLALPKFV--------------VSGTPDRPKHF 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L + ++T NLN+IID+N+YP+ RRSNLRHRPIGIG+QGLADTF+L+G+P+ES
Sbjct: 465 DFEQLRRIVHVVTRNLNRIIDINYYPVPEARRSNLRHRPIGIGVQGLADTFVLMGMPYES 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR--W 598
EA++LN+ IFETIY+ AL+ S +LA ++G Y+++ GSP S G LQ DMW + D+ W
Sbjct: 525 DEARELNRRIFETIYFAALETSCQLAKEEGVYDSFLGSPASIGTLQQDMWPVDVDDKPMW 584
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
+W LR I NG+RNSLLVAPMPTAST+QILGN E FEP TSNIY RRVLSGEF V+N+
Sbjct: 585 NWDELRHNIEMNGLRNSLLVAPMPTASTAQILGNTESFEPITSNIYVRRVLSGEFQVINR 644
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
HL++ L +LGLWS +++ +II GSV I EIP E++ +YKTVWEI + ++DMAADRG
Sbjct: 645 HLVQHLIDLGLWSESMRNRIIARRGSVQDIEEIPIEVRRLYKTVWEISGRRIIDMAADRG 704
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
YIDQSQSLN+H+ +P++ KL+S+HFYAW G+KTGMYYLRT+AAA+AI+FTVD
Sbjct: 705 RYIDQSQSLNMHVAEPNYAKLSSMHFYAWRAGLKTGMYYLRTKAAANAIQFTVD 758
>gi|403339052|gb|EJY68774.1| Ribonucleoside-diphosphate reductase [Oxytricha trifallax]
Length = 857
Score = 990 bits (2560), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/777 (59%), Positives = 600/777 (77%), Gaps = 20/777 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YVIKRDG K+ + DKI R++ YGL+++ + +V KV +G++ GVTT +LD L
Sbjct: 20 IYVIKRDGTKQEIDQDKIRRRMECHMYGLNEKFINKEVVVNKVFSGIFSGVTTAELDNLT 79
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A M + HPDY+ LA R+A+SNLHK T + F + + N+ +K G+ A+L+A+DV
Sbjct: 80 AETCAYMNMVHPDYSKLAARIAISNLHKKTSSQFIDVASKLRNFKDK-IGRDAALLAEDV 138
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++I+KN + I+YDRD+++DYFGF+TLER+YLLK ++++ERPQHMLMRVS+GIHK
Sbjct: 139 FDVIVKNQDLIQSRIVYDRDYNYDYFGFRTLERAYLLKDGNQILERPQHMLMRVSIGIHK 198
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +SA +TY LMSQ WFTHATPTLFN+GTP+PQ+SSCFLL +K+DSI+GI++TLK+ AI
Sbjct: 199 EDLESAFETYDLMSQLWFTHATPTLFNSGTPKPQMSSCFLLTVKEDSIDGIFETLKQIAI 258
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIG+S+ ++RA+ SYI GTNG SNG++PML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 259 ISKAAGGIGVSVSDVRAADSYIRGTNGYSNGLIPMLKVFNDTARYVDQGGGKRKGAFAVY 318
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADI++FL LRKN GKEE RARDLFYALW PDLFM RV + W+L CP++ GL
Sbjct: 319 VEPWHADIYDFLQLRKNHGKEENRARDLFYALWTPDLFMRRVEANEDWTLMCPNECPGLT 378
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+WG EFE LY +YE GR + + AR LW +I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 379 TTWGEEFEKLYIEYETTGRGRKTVKARWLWGQIIESQNETGTPYMLYKDACNRKSNQQNL 438
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIVEF+SP+E AVCNLASIAL R+V + + + +
Sbjct: 439 GTIKSSNLCTEIVEFTSPDEVAVCNLASIALNRFVLK------------------ETQEY 480
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+E+L VTK IT+NLNKIID N+YP+ R SNLRHRPIGIG+QG AD +L +PFE
Sbjct: 481 DYEKLHYVTKRITKNLNKIIDNNYYPVPEARNSNLRHRPIGIGVQGFADALQMLKIPFED 540
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-SDRWD 599
+A +LN+ IFETIY+ A++AS E A +GPYET+ GSP+SKG+ Q D+WN P SDR+D
Sbjct: 541 QKALRLNELIFETIYHAAMEASMEQAKVEGPYETFPGSPLSKGLFQFDLWNKKPCSDRYD 600
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W LR+ + + G RNSLL+APMPTASTSQILGNNE FEPYTSN+YTRRVL+GEF+ VN H
Sbjct: 601 WEQLRKDVIQYGARNSLLLAPMPTASTSQILGNNETFEPYTSNVYTRRVLAGEFVCVNPH 660
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
L++DL + L+S +K ++ NGS+ KI IP+ +K +YKTVWEI QK L+D+A RG
Sbjct: 661 LVQDLIDNDLFSSDIKNSLLGLNGSIQKIKSIPQNIKDLYKTVWEIPQKVLLDLAIGRGP 720
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
YI QSQS NI+M +P+ K+TS+HFY W G+KTG YYLR++ + DAIKFTVD L
Sbjct: 721 YICQSQSTNIYMGEPNFAKMTSMHFYGWKNGLKTGQYYLRSKPSRDAIKFTVDIEHL 777
>gi|403366375|gb|EJY82990.1| Ribonucleoside-diphosphate reductase [Oxytricha trifallax]
Length = 864
Score = 990 bits (2559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/775 (60%), Positives = 595/775 (76%), Gaps = 22/775 (2%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V KR+G E ++ KI ARL+KL L+ ++ + ++ KV + G+ TT LD L +E
Sbjct: 23 VTKRNGTMEAMQVGKIRARLEKLLENLAYKYINLDIIITKVVSYAQNGIKTTDLDNLLSE 82
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
T A + + HPDY LA RVAV+ LHK T F E I +YNY G A+L+A+DVY+
Sbjct: 83 TTAYLNILHPDYGKLASRVAVTKLHKETSEDFFEVISTLYNYTEYARGD-AALIAEDVYK 141
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDD 182
++ +N L A+ Y RD+D+DYFGFKTLERSYLLK++S++VERPQHMLMRVSVGIHK D
Sbjct: 142 VVEENKEKLQAALNYKRDWDYDYFGFKTLERSYLLKVNSKIVERPQHMLMRVSVGIHKKD 201
Query: 183 TDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIIS 242
DSA++TY+LMS WFTHATPTLFNAGTP+PQ+SSCFLL MKDDSI GIYDTLK A+IS
Sbjct: 202 IDSAIETYNLMSDRWFTHATPTLFNAGTPKPQMSSCFLLMMKDDSINGIYDTLKNIALIS 261
Query: 243 KSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLE 302
KSAGG+GL++HNIRA+GSYI GTNG SNG+VPML+VFN+TARYVDQGGGKRKG+FAIYLE
Sbjct: 262 KSAGGVGLAVHNIRATGSYIKGTNGHSNGLVPMLRVFNETARYVDQGGGKRKGSFAIYLE 321
Query: 303 PWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADS 362
PWHAD+F+FL LRKN GKEE RARDLF+ALW+PDLFM+RV+ DG W+LFCP++A GL +
Sbjct: 322 PWHADVFDFLQLRKNHGKEEQRARDLFFALWIPDLFMKRVQADGDWTLFCPNEAKGLFEV 381
Query: 363 WGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGT 422
G EFE LY++YE++G + + A+KLW I+ SQIETGTPYML+KD N KSNQ+NLGT
Sbjct: 382 HGQEFEALYTKYEQQGIGRKTMKAQKLWEAIIESQIETGTPYMLYKDHANSKSNQKNLGT 441
Query: 423 IKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDF 482
IKSSNLC EI+E++SP+E AVCNLASI+LPRYV K+ +FD+
Sbjct: 442 IKSSNLCCEIIEYTSPDEVAVCNLASISLPRYV--------------------KDGVFDY 481
Query: 483 ERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPE 542
E+L +VT IT NLN+IID N YP + + SN+RHRPIGIGIQGLAD +LL +PFE
Sbjct: 482 EKLHKVTYQITINLNRIIDGNFYPCDEAKNSNMRHRPIGIGIQGLADALMLLKIPFEDER 541
Query: 543 AQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN-ITPSDRWDWS 601
A Q N++IFETIY+ ++++S +LA +G Y+++ GSP+S+GI Q DMWN PS+R++W
Sbjct: 542 AYQFNQEIFETIYHASMQSSVDLAKVEGHYQSFPGSPLSQGIFQYDMWNEKLPSNRYNWE 601
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
+LRE + K G RNSLLVAPMPTASTSQILGNNE FEPYT+NIYTRRVL+GEF+ VN HL+
Sbjct: 602 TLREEVKKFGARNSLLVAPMPTASTSQILGNNESFEPYTTNIYTRRVLAGEFVCVNPHLV 661
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
+DL L LW+ ++ +++ NGS+ IS IP+++K +YKT+WEI QK L+++A R +I
Sbjct: 662 RDLISLDLWTQEVRNQLVGHNGSIQSISGIPDDIKKLYKTIWEIPQKQLINLARARAPFI 721
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
QSQSLNI+M + + KL+S HFYAW G+KTG YYLRTR A DAIKFT+D +
Sbjct: 722 CQSQSLNIYMGEATYTKLSSAHFYAWQLGLKTGQYYLRTRPARDAIKFTLDVESM 776
>gi|399218487|emb|CCF75374.1| unnamed protein product [Babesia microti strain RI]
Length = 813
Score = 987 bits (2551), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/803 (59%), Positives = 596/803 (74%), Gaps = 33/803 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+ R G EPV FD+I R++KL YGL DP V + V G+Y G+ T+QLDELA
Sbjct: 1 MFVVNRKGEDEPVSFDQILHRIQKLCYGL-HPIVDPPRVTKNVINGMYSGIPTSQLDELA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T A M NHPD++ LA R+ + NLHK T ++ +YN+ + +G + L+ D V
Sbjct: 60 AQTCAYMAANHPDFSKLAARIIIDNLHKNTFDNIESVANLLYNFKDS-NGNHSPLLNDKV 118
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ I+++ ++ I YD DF +DYFGFKTLERSYLL+++ ++ ERPQH+L+RV+ GIH
Sbjct: 119 YKFIIQHKDRINKEIDYDMDFQYDYFGFKTLERSYLLRVNGKIAERPQHLLVRVACGIHS 178
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D A++TY+ MS+ F HATPTLFN+GT PQ+SSCFLL +KDDSI GI+DTL +CA+
Sbjct: 179 NDIDRAMETYNYMSKKLFIHATPTLFNSGTKFPQMSSCFLLDIKDDSISGIFDTLTQCAL 238
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IRAS SYI GTNG SNGI+PML++FNDTARYVDQGGGKRKG+FAIY
Sbjct: 239 ISKTAGGIGLAIHKIRASSSYIRGTNGHSNGIIPMLRIFNDTARYVDQGGGKRKGSFAIY 298
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN G EE RARDLFYALW+PDLFM+RV + W+L CP + GL
Sbjct: 299 LEPWHADIFEFLDLRKNHGSEESRARDLFYALWIPDLFMKRVEANENWTLMCPDECRGLD 358
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
WG EFE LY+ YE +G + + A+ LWF IL SQIETGTPYML+KD+CN KSNQ+N+
Sbjct: 359 QVWGEEFEKLYTSYESKGMGRKTVPAQTLWFAILQSQIETGTPYMLYKDACNYKSNQKNI 418
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIV+++SP E AVCNLAS+ALP+YV K + F
Sbjct: 419 GTIKSSNLCCEIVQYTSPNEVAVCNLASLALPKYVNTKTLE------------------F 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF+ L KI+T NLN+IID N+YP+ SN RHRPIG+G+QGLADTF+L+ PFES
Sbjct: 461 DFKLLHSACKILTFNLNRIIDENYYPVPEAEYSNKRHRPIGVGVQGLADTFMLMRYPFES 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-WD 599
EA++LN IFETIY+ L+ S ELA K GPYET+ GSP S+G+LQ D+WN D ++
Sbjct: 521 QEARELNVRIFETIYHGCLEESVELAKKYGPYETFEGSPASQGLLQFDLWNRKVDDNFYN 580
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQIL---------GNNECFEPYTSNIYTRRVLS 650
W+ +++ I K G+RNSLLVAPMPTASTSQIL GN+E FEPYT NIY RRVLS
Sbjct: 581 WTEMKKDIMKYGLRNSLLVAPMPTASTSQILVLTYYPNYIGNSESFEPYTCNIYYRRVLS 640
Query: 651 GEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTL 710
GEF VVN HLL DL +L LW+ +K K+I NGS+ I EIP+ELK +YKTVWEIKQK +
Sbjct: 641 GEFFVVNPHLLNDLVQLDLWNDQMKQKLIAYNGSLQNIDEIPQELKNLYKTVWEIKQKAI 700
Query: 711 VDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFT 770
+DMAADRG +IDQSQSLNI+MEQP + KL+S+HFY W KG+KTG+YYLRT+ AADAIKFT
Sbjct: 701 IDMAADRGAFIDQSQSLNIYMEQPTYAKLSSMHFYGWKKGLKTGVYYLRTQPAADAIKFT 760
Query: 771 VDTSVL---NNEKANRADNDVEA 790
VD ++ N N++ ++V A
Sbjct: 761 VDNQIVALTKNFTLNKSQSNVGA 783
>gi|332023837|gb|EGI64061.1| Ribonucleoside-diphosphate reductase large subunit [Acromyrmex
echinatior]
Length = 854
Score = 985 bits (2546), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/842 (57%), Positives = 607/842 (72%), Gaps = 51/842 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+GRKE V FDKIT+R+ K Y L + DP VA +V G+Y GVTT LD LA
Sbjct: 32 MHVIKRNGRKEDVHFDKITSRIVKQCYNLDMNYVDPSAVAIQVIRGLYSGVTTVVLDNLA 91
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA M HPDYA+LA R+ VSNLHK TK SFSE + D++ N + +++
Sbjct: 92 AETAATMATKHPDYAILAARIDVSNLHKETKKSFSEVMHDLHYAKNPVTNHYNPIISKHY 151
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y II NA LD AIIYDRDF+++Y GFKTLERSYLLK++ ++VERPQHMLMRV+VGIH+
Sbjct: 152 YNIIKNNAEKLDSAIIYDRDFNYNYIGFKTLERSYLLKINGKIVERPQHMLMRVAVGIHE 211
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
++ D ++TY+ +S+ +FTHA+PTLFNA T Q+SSCFLL ++DDSI+ I+ TLK CA+
Sbjct: 212 NNIDKVIETYNYLSERYFTHASPTLFNACTNNQQMSSCFLLTLEDDSIKSIFGTLKNCAL 271
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL++H IRA T +NG++ +L+++ND A YVDQGG KR GAFAIY
Sbjct: 272 ISKYAGGIGLNVHCIRAKNVEDTSTK-RTNGLISILKLYNDMAIYVDQGGNKRPGAFAIY 330
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FL+L++N G RARDLFY LW+PDLFMERV +D WSL CP ++ GL+
Sbjct: 331 LEPWHADIFDFLELKRNIGDGNMRARDLFYGLWIPDLFMERVYNDEMWSLMCPHESPGLS 390
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EF+ LY++YE+EGR K + AR +W IL SQ+ETGTPYML+KD CNRKSN Q++
Sbjct: 391 DVWGDEFKELYTRYEKEGRYKKQVEARSVWLAILRSQVETGTPYMLYKDHCNRKSNHQHI 450
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GT+K SNLCTEI+E+S P E AVCNLASIA+ +V + ++F
Sbjct: 451 GTVKCSNLCTEIIEYSGPGEVAVCNLASIAVNMFV------------------NIDTKIF 492
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L V KI+T NL+K+IDVN YPIE TR SN RHRPIGIGIQGLAD F+L+ PFES
Sbjct: 493 DFDKLKTVAKIVTRNLDKVIDVNFYPIEETRTSNHRHRPIGIGIQGLADAFLLMRYPFES 552
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFET+YY AL+AS ELA + G YETY GSP+SKGILQ DMWN+ P++ WDW
Sbjct: 553 KEAKELNIKIFETLYYGALEASCELAAEKGTYETYQGSPVSKGILQYDMWNVKPTNLWDW 612
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY RRVLSGEFI+VN HL
Sbjct: 613 DELKAKIAKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYVRRVLSGEFIIVNPHL 672
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLT GLW +K +I+ GSV I IP++LK +YKTVWEI QK +++MAADRG +
Sbjct: 673 LRDLTSRGLWDEDMKNEILANFGSVQNIERIPDDLKELYKTVWEIPQKVILEMAADRGAF 732
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
+DQSQSLN+H+ P KLTS+HF+ W G+KTGMYYLRT+ AA+ I+FTVD S L N
Sbjct: 733 VDQSQSLNVHIGDPTTEKLTSMHFFGWKSGLKTGMYYLRTKPAANPIQFTVDKSKLQNRD 792
Query: 781 A---------------------NRADNDVE----------ANL-AQVVCSLKNQEECMAC 808
+ +D+D E NL A + CS KN+E+CMAC
Sbjct: 793 SVSNVSDASTSVVNSTPIQSPNQDSDDDAEKRKQLSTQARKNLDAMLACSRKNKEDCMAC 852
Query: 809 GS 810
S
Sbjct: 853 SS 854
>gi|146091813|ref|XP_001470128.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania infantum JPCM5]
gi|134084922|emb|CAM69320.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania infantum JPCM5]
Length = 799
Score = 984 bits (2543), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/817 (57%), Positives = 613/817 (75%), Gaps = 34/817 (4%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+IKR+G +P KI R +++ GL ++H D ++ + V G+ + +LDEL A+
Sbjct: 8 IIKRNGEAQPYDACKIRRRFERVMEGLDRDHLDVDMLTENVTRGLTDQIRYDKLDELVAQ 67
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA HPDY + GR+ ++LHK T S ET + ++++ ++ + A L+ADDV+E
Sbjct: 68 TAAYSVTKHPDYGRMGGRLCTTSLHKQTNESLLETFRLLHDHVTVQTNRPAPLIADDVWE 127
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS-----RVVERPQHMLMRVSVG 177
++ ++ L I Y RD +F++FG+KTLERSYLL++++ R+VERPQ M MRV++G
Sbjct: 128 VMQQHHKELQSMIDYSRDLNFEFFGYKTLERSYLLRIETGRGEMRIVERPQQMFMRVALG 187
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
IH D + +TY LMS+ +FTHATPTLFNAGTP+PQ+SSCFL+ K+DSI+GIYDTLK+
Sbjct: 188 IHGADLKNVRETYDLMSKGFFTHATPTLFNAGTPKPQMSSCFLVASKEDSIDGIYDTLKE 247
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
CA+ISK+AGGIGL +HNIRA+GSYI GTNG+SNG+VPML+VFN+TARYVDQGGGKRKGAF
Sbjct: 248 CAVISKAAGGIGLHVHNIRAAGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGGKRKGAF 307
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
A+YLEPWHAD+F FL L++N GK++ RARDLFYALW+PDLFM RV+ +GKW+L P+
Sbjct: 308 AVYLEPWHADVFGFLLLKRNTGKDDQRARDLFYALWIPDLFMRRVKSEGKWTLMDPNTCP 367
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
GL+D +G EFE LY +YE EGR I A+++WF IL SQIETG P++L+KD+CN KSNQ
Sbjct: 368 GLSDCYGEEFERLYERYESEGRGVKTIQAQEVWFAILESQIETGGPFILYKDACNSKSNQ 427
Query: 418 QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKN 477
+NLGTIK SNLCTEIVE++SP+ETAVCNLASIALPR+V D +
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSPQETAVCNLASIALPRFV------------------DVEK 469
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
R F+ + L VTK IT NLN++ID N+YP+ET RRSN+R+RPIG+G+QGLAD FIL+ LP
Sbjct: 470 REFNHQLLYTVTKQITRNLNRVIDRNYYPVETARRSNMRNRPIGLGVQGLADAFILMRLP 529
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-NITP-S 595
F S EAQ++N +IFETIY+ A+++S ELA +DGPYET+ GSP S+GILQ DMW N P S
Sbjct: 530 FVSAEAQRVNAEIFETIYFAAVESSMELAKEDGPYETFTGSPASEGILQFDMWKNARPNS 589
Query: 596 DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
RWDW+SL+E + + G+RNSLLVAPMPTASTSQILGNNECFEP+TSNIY RRVLSGEF V
Sbjct: 590 GRWDWASLKEKVMQVGMRNSLLVAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFPV 649
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VNK+L+ DL GLW+ +++ +II NGS+ I+ +P++L+ +Y+TVWEI Q+ L+DMA
Sbjct: 650 VNKYLVMDLIARGLWNESMRNEIISYNGSILTINGMPDDLRELYRTVWEIPQRKLIDMAR 709
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
DRG YIDQSQSLN+ ++ P G++TS+ FY W G+KTG+YYLRT+AAADAIKFTVD
Sbjct: 710 DRGQYIDQSQSLNLFLQSPTSGQITSMLFYCWEAGLKTGVYYLRTKAAADAIKFTVDAKR 769
Query: 776 LNNEKANRADNDVEANLAQVVCSLK--NQEECMACGS 810
+ + N Q + S + EEC+ CGS
Sbjct: 770 MKEIQERE-------NSQQTMSSHRASQPEECLNCGS 799
>gi|398018021|ref|XP_003862197.1| ribonucleoside-diphosphate reductase large chain, putative
[Leishmania donovani]
gi|322500426|emb|CBZ35503.1| ribonucleoside-diphosphate reductase large chain, putative
[Leishmania donovani]
Length = 799
Score = 983 bits (2542), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/817 (57%), Positives = 613/817 (75%), Gaps = 34/817 (4%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+IKR+G +P KI R +++ GL ++H D ++ + V G+ + +LDEL A+
Sbjct: 8 IIKRNGEAQPYDACKIRRRFERVMEGLDRDHLDVDMLTENVTRGLTDQIRYDKLDELVAQ 67
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA HPDY + GR+ ++LHK T S ET + ++++ ++ + A L+ADDV+E
Sbjct: 68 TAAYSVTKHPDYGRMGGRLCTTSLHKQTNESLLETFRLLHDHVTVQTNRPAPLIADDVWE 127
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS-----RVVERPQHMLMRVSVG 177
++ ++ L I Y RD +F++FG+KTLERSYLL++++ R+VERPQ M MRV++G
Sbjct: 128 VMQQHHKELQSMIDYSRDLNFEFFGYKTLERSYLLRIETGRGEMRIVERPQQMFMRVALG 187
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
IH D + +TY LMS+ +FTHATPTLFNAGTP+PQ+SSCFL+ K+DSI+GIYDTLK+
Sbjct: 188 IHGADLKNVRETYDLMSKGFFTHATPTLFNAGTPKPQMSSCFLVASKEDSIDGIYDTLKE 247
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
CA+ISK+AGGIGL +HNIRA+GSYI GTNG+SNG+VPML+VFN+TARYVDQGGGKRKGAF
Sbjct: 248 CAVISKAAGGIGLHVHNIRAAGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGGKRKGAF 307
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
A+YLEPWHAD+F FL L++N GK++ RARDLFYALW+PDLFM RV+ +GKW+L P+
Sbjct: 308 AVYLEPWHADVFGFLLLKRNTGKDDQRARDLFYALWIPDLFMRRVKSEGKWTLMDPNTCP 367
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
GL+D +G EFE LY +YE EGR I A+++WF IL SQIETG P++L+KD+CN KSNQ
Sbjct: 368 GLSDCYGEEFERLYERYESEGRGVKTIQAQEVWFAILESQIETGGPFVLYKDACNSKSNQ 427
Query: 418 QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKN 477
+NLGTIK SNLCTEIVE++SP+ETAVCNLASIALPR+V D +
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSPQETAVCNLASIALPRFV------------------DVEK 469
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
R F+ + L VTK IT NLN++ID N+YP+ET RRSN+R+RPIG+G+QGLAD FIL+ LP
Sbjct: 470 REFNHQLLYTVTKQITRNLNRVIDRNYYPVETARRSNMRNRPIGLGVQGLADAFILMRLP 529
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-NITP-S 595
F S EAQ++N +IFETIY+ A+++S ELA +DGPYET+ GSP S+GILQ DMW N P S
Sbjct: 530 FVSAEAQRVNAEIFETIYFAAVESSMELAKEDGPYETFTGSPASEGILQFDMWKNARPNS 589
Query: 596 DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
RWDW+SL+E + + G+RNSLLVAPMPTASTSQILGNNECFEP+TSNIY RRVLSGEF V
Sbjct: 590 GRWDWASLKEKVMQVGMRNSLLVAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFPV 649
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VNK+L+ DL GLW+ +++ +II NGS+ I+ +P++L+ +Y+TVWEI Q+ L+DMA
Sbjct: 650 VNKYLVMDLIARGLWNESMRNEIISYNGSILTINGMPDDLRELYRTVWEIPQRKLIDMAR 709
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
DRG YIDQSQSLN+ ++ P G++TS+ FY W G+KTG+YYLRT+AAADAIKFTVD
Sbjct: 710 DRGQYIDQSQSLNLFLQSPTSGQITSMLFYCWEAGLKTGVYYLRTKAAADAIKFTVDAKR 769
Query: 776 LNNEKANRADNDVEANLAQVVCSLK--NQEECMACGS 810
+ + N Q + S + EEC+ CGS
Sbjct: 770 MKEIQERE-------NSQQTMSSHRASQPEECLNCGS 799
>gi|145497945|ref|XP_001434961.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402089|emb|CAK67564.1| unnamed protein product [Paramecium tetraurelia]
Length = 840
Score = 982 bits (2539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/787 (59%), Positives = 589/787 (74%), Gaps = 32/787 (4%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV+KRDG K+ + KI RL+ L+ L +H + L+ KV G+Y+G+TT QLD LAA
Sbjct: 23 YVLKRDGGKQNIDIQKIAERLQNLASNL--QHININLIMWKVIQGMYEGITTVQLDNLAA 80
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ET A M + HP Y+LLA R+AV+NLHK T SFSE ++++ +K G+ A L+ADDVY
Sbjct: 81 ETCAYMNLVHPQYSLLAARIAVNNLHKETSESFSEVATKLHSFTDKY-GRPAPLIADDVY 139
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
+IIM+N + I YDRD+ +D+FGFKTLERSYLLK + +ERPQ +LMRVS+GIHK+
Sbjct: 140 KIIMENKDIIQNEINYDRDYQYDFFGFKTLERSYLLKEGKKPIERPQQLLMRVSIGIHKE 199
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D SA +TYHLMSQ +FTHATPTLFN+GTP PQ+SSCFLL M DDSIEGIY+TLK+CA+I
Sbjct: 200 DLQSAFQTYHLMSQKYFTHATPTLFNSGTPYPQMSSCFLLDMVDDSIEGIYETLKRCALI 259
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKSAGGIGLS IR+ SYI GTNG SNG+VPML+VFNDTARYVDQGGGKRKG+FAIYL
Sbjct: 260 SKSAGGIGLSASKIRSQDSYIRGTNGISNGLVPMLKVFNDTARYVDQGGGKRKGSFAIYL 319
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWH+DI FL LRKN G EE RARDLF LW+PDLFM+RV+DD W+L CP++ GL D
Sbjct: 320 EPWHSDIISFLQLRKNHGIEEQRARDLFLGLWIPDLFMQRVKDDSDWTLMCPNECPGLQD 379
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
+G EF LY+ YE + ++ + AR+LW EI+++QI TG PYML+KD+CN KSNQ+NLG
Sbjct: 380 CYGQEFNKLYTDYESKNMGRVTMKARQLWQEIIDAQISTGLPYMLYKDACNSKSNQKNLG 439
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLCTEI++++SP+E AVCNLASI L + ++E ++ FD
Sbjct: 440 TIKSSNLCTEIIQYTSPDEIAVCNLASINLQKLIKE-------------------DKTFD 480
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F++L E+TKIIT NLN +ID+N YP++ SN R+RPIGIG+QG AD + +PF+S
Sbjct: 481 FDKLLEITKIITINLNIVIDLNFYPVKQAEYSNKRNRPIGIGVQGFADALQRMKIPFDSE 540
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
+A +LN IFETIYY A + S ELA K GPYET+ GSP S+GILQ DMW ++P +DW+
Sbjct: 541 DALELNAKIFETIYYGACQTSLELAQKLGPYETFTGSPASQGILQFDMWGVSPK-LYDWN 599
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
+L++ I+K+G+RNSLL+APMPTASTSQIL NNE FEPYT+NIYTRRVL+GEF+ +N HL+
Sbjct: 600 TLKQNIAKHGMRNSLLIAPMPTASTSQILQNNESFEPYTTNIYTRRVLAGEFVCINPHLV 659
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
DL EL LW+ +K K+I NGSV I EIP +K++YKTVWEI QK ++++A R +I
Sbjct: 660 DDLIELNLWTPQIKNKLIMNNGSVQNIEEIPNNIKSLYKTVWEISQKAILNLATSRAPFI 719
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKT---------GMYYLRTRAAADAIKFTVD 772
DQSQSLNIHM +P K+TS+HFYA KG+K GMYYLRTR AAD IKFTVD
Sbjct: 720 DQSQSLNIHMAEPTMSKVTSMHFYAGRKGVKNRYILYITIKGMYYLRTRPAADPIKFTVD 779
Query: 773 TSVLNNE 779
L E
Sbjct: 780 VEALLKE 786
>gi|157871642|ref|XP_001684370.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania major strain Friedlin]
gi|68127439|emb|CAJ05210.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania major strain Friedlin]
Length = 799
Score = 982 bits (2539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/818 (56%), Positives = 613/818 (74%), Gaps = 36/818 (4%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+IKR+G +P KI R +++ GL ++H D ++ + V G+ + +LDEL A+
Sbjct: 8 IIKRNGEAQPYDASKIRRRFERVMEGLDRDHLDVDMLTENVTRGLTDQIRYDKLDELVAQ 67
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA HPDY + GR+ ++LHK T S ET + ++++ ++ + A L+ADDV+E
Sbjct: 68 TAAYSVTKHPDYGRMGGRLCTTSLHKQTNESLLETFRLLHSHVTVQTNRPAPLIADDVWE 127
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS-----RVVERPQHMLMRVSVG 177
++ ++ A L G I Y RD +F++FG+KTLERSYLL++++ R+VERPQ M MRV++G
Sbjct: 128 VMKQHHAELQGMIDYSRDLNFEFFGYKTLERSYLLRIETGRGEMRIVERPQQMFMRVALG 187
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
IH D + +TY LMS+ +FTHATPTLFNAGTP+PQ+SSCFL+ K+DSI+GIYDTLK+
Sbjct: 188 IHGADLKNVRETYDLMSKGFFTHATPTLFNAGTPKPQMSSCFLVASKEDSIDGIYDTLKE 247
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
CA+ISK+AGGIGL +HNIRA+GSYI GTNG+SNG+VPML+VFN+TARYVDQGGGKRKGAF
Sbjct: 248 CAVISKAAGGIGLHVHNIRAAGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGGKRKGAF 307
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
A+YLEPWHAD+F FL L++N GK++ RARDLFYALW+PDLFM RV+ +GKW+L P+
Sbjct: 308 AVYLEPWHADVFGFLLLKRNTGKDDQRARDLFYALWIPDLFMRRVKSEGKWTLMDPNTCP 367
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
GL+D +G EFE LY +YE EGR I A+++WF IL SQIETG P++L+KD+CN KSNQ
Sbjct: 368 GLSDCYGEEFERLYERYESEGRGVKTIQAQEVWFAILESQIETGGPFILYKDACNSKSNQ 427
Query: 418 QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKN 477
+NLGTIK SNLCTEIVE++S +ETAVCNLASIALPR+V + +
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSSQETAVCNLASIALPRFV------------------EVEK 469
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
R + + L VTK IT NLN++ID N+YP+ET RRSN+R+RPIG+G+QGLAD FIL+ LP
Sbjct: 470 RELNHQLLYTVTKQITRNLNRVIDRNYYPVETARRSNMRNRPIGLGVQGLADAFILMRLP 529
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-NITP-S 595
F S EAQ++N +IFETIY+ A+++S ELA ++GPYET+ GSP S+GILQ DMW N P S
Sbjct: 530 FVSAEAQRVNAEIFETIYFAAVESSMELAKEEGPYETFAGSPASEGILQFDMWKNARPNS 589
Query: 596 DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
RWDW+SL+E + + G+RNSLLVAPMPTASTSQILGNNECFEP+TSNIY RRVLSGEF V
Sbjct: 590 GRWDWASLKEKVMQVGMRNSLLVAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFPV 649
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VNK+L+ DL GLW+ +++ +II NGS+ I+ +P++L+ +Y+TVWEI Q+ L+DMA
Sbjct: 650 VNKYLVMDLIARGLWNESMRNEIISYNGSILAINGMPDDLRELYRTVWEIPQRKLIDMAR 709
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
DRG YIDQSQSLN+ ++ P G++TS+ FY+W G+KTG+YYLRT+AAADAIKFTVD
Sbjct: 710 DRGQYIDQSQSLNLFLQSPTSGQITSMLFYSWEAGLKTGVYYLRTKAAADAIKFTVD--- 766
Query: 776 LNNEKANRADNDVEANLAQVVCS---LKNQEECMACGS 810
A R E +Q S EEC+ CGS
Sbjct: 767 -----AKRMKEIQERETSQQTMSSHRASQPEECLNCGS 799
>gi|401424884|ref|XP_003876927.1| ribonucleoside-diphosphate reductase large chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493171|emb|CBZ28456.1| ribonucleoside-diphosphate reductase large chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 799
Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/817 (57%), Positives = 611/817 (74%), Gaps = 34/817 (4%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+IKR+G +P KI R +++ GL ++H D ++ + V G+ + +LDEL A+
Sbjct: 8 IIKRNGEAQPYDASKIRRRFERVMEGLDRDHLDVDMLTENVTRGLTDQIRYDKLDELVAQ 67
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA HPDY + GR+ ++LHK T S ET + ++++ ++ + A L+A DV+E
Sbjct: 68 TAAYSVTKHPDYGRMGGRLCTTSLHKQTNASLLETFRLLHDHVTVQTNRPAPLIAGDVWE 127
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS-----RVVERPQHMLMRVSVG 177
++ ++ L G I Y RD F++FG+KTLERSYLL+++S R+VERPQ M MRV++G
Sbjct: 128 VMQQHHKELQGMIDYSRDLSFEFFGYKTLERSYLLRIESGRGEMRIVERPQQMFMRVALG 187
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
IH D + +TY LMS+ +FTHATPTLFNAGTP+PQ+SSCFL+ K+DSI+GIYDTLK+
Sbjct: 188 IHGTDLKNVRETYDLMSKGFFTHATPTLFNAGTPKPQMSSCFLVASKEDSIDGIYDTLKE 247
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
CA+ISK+AGGIGL +HNIRA+GSYI GTNG+SNG+VPML+VFN+TARYVDQGGGKRKGAF
Sbjct: 248 CAVISKAAGGIGLHVHNIRAAGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGGKRKGAF 307
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
A+YLEPWHADIF FL L++N GK++ RARDLFYALW+PDLFM RV+ +GKW+L P+
Sbjct: 308 AVYLEPWHADIFGFLLLKRNTGKDDQRARDLFYALWIPDLFMRRVKSEGKWTLMDPNTCP 367
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
GL+D +G EFE LY +YE EGR I A+++WF IL SQIETG P++L+KD+CN KSNQ
Sbjct: 368 GLSDCYGEEFERLYERYESEGRGVKTIQAQEVWFAILESQIETGGPFILYKDACNSKSNQ 427
Query: 418 QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKN 477
+NLGTIK SNLCTEIVE++SP+ETAVCNLASIALPR+V D +
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSPQETAVCNLASIALPRFV------------------DVEK 469
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
R F+ + L VTK IT NLN++ID N+YP+ET R SN+R+RPIG+G+QGLAD FIL+ LP
Sbjct: 470 REFNHQLLYTVTKQITRNLNRVIDRNYYPVETARHSNMRNRPIGLGVQGLADAFILMRLP 529
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-NITP-S 595
F S EAQ++N +IFETIY+ A+++S ELA ++GPYET+ GSP S+GILQ DMW N P S
Sbjct: 530 FVSAEAQRVNAEIFETIYFAAVESSMELAKEEGPYETFKGSPASEGILQFDMWKNPRPNS 589
Query: 596 DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
RWDW+SL+E + + G+RNSLLVAPMPTASTSQILGNNECFEP+TSNIY RRVLSGEF V
Sbjct: 590 GRWDWASLKEKVMQVGLRNSLLVAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFPV 649
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VNK+L+ DL GLW+ +++ +II NGS+ I+ IP++L+ +Y+TVWEI Q+ L+DMA
Sbjct: 650 VNKYLVMDLIARGLWNESMRNEIISYNGSILTINGIPDDLRELYRTVWEIPQRKLIDMAR 709
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
DRG YIDQSQSLN+ ++ P G++TS+ FY W G+KTG+YYLRT+AAADAIKFTVD
Sbjct: 710 DRGQYIDQSQSLNLFLQSPTSGQITSMLFYCWEAGLKTGLYYLRTKAAADAIKFTVDAKR 769
Query: 776 LNNEKANRADNDVEANLAQVVCSLK--NQEECMACGS 810
+ + N Q + S + EEC+ CGS
Sbjct: 770 MKEIQERE-------NSQQTMSSRRASQPEECLNCGS 799
>gi|154340341|ref|XP_001566127.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063446|emb|CAM39626.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 799
Score = 981 bits (2536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/815 (57%), Positives = 609/815 (74%), Gaps = 30/815 (3%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+IKR+G + KI R +++ GL +H D ++ + V G+ + +LDEL A+
Sbjct: 8 IIKRNGEAQTYDASKIRRRFERVMEGLDSDHLDVDMLTENVTRGLTDQIRYDKLDELVAQ 67
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA HPDY + GR+ ++LHK T S ET + ++++ ++ + A LVADDV+E
Sbjct: 68 TAAYSVTKHPDYGRMGGRLCTTSLHKQTSESLLETFRLLHDHVTVQTHRPAPLVADDVWE 127
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS-----RVVERPQHMLMRVSVG 177
++ ++ L I Y RD +F++FG+KTLERSYLL++++ R+VERPQ M MRV++G
Sbjct: 128 VMQQHHKELQSMIDYSRDLNFEFFGYKTLERSYLLRIETGRGEMRIVERPQQMFMRVALG 187
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
IH D ++ +TY+LMS +FTHATPTLFNAGTP+PQ+SSCFL+ KDDSI+GIYDTLK+
Sbjct: 188 IHGRDLNNVRETYNLMSMGFFTHATPTLFNAGTPKPQMSSCFLVASKDDSIDGIYDTLKE 247
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
CA+ISK+AGGIGL +HNIRA+GSYI GTNG+SNG+VPML+VFN+TARYVDQGGGKRKGAF
Sbjct: 248 CAVISKAAGGIGLHVHNIRAAGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGGKRKGAF 307
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
A+YLEPWHAD+F FL L++N GK++ RARDLFYALW+PDLFM+RV+ +G+W+L P+
Sbjct: 308 AVYLEPWHADVFGFLLLKRNTGKDDQRARDLFYALWIPDLFMKRVKSEGRWTLMDPNTCP 367
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
GL+D G FE LY +YE EGR I A+++WF IL SQIETG P++L+KD+CN KSNQ
Sbjct: 368 GLSDCHGEAFERLYERYEAEGRGVKTIQAQEVWFAILESQIETGGPFILYKDACNSKSNQ 427
Query: 418 QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKN 477
+NLGTIK SNLCTEIVE++SPEETAVCNLASIALPR+V D +
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSPEETAVCNLASIALPRFV------------------DVEK 469
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
R F+ + L VTK IT NLN++ID N+YP+ET RRSN+R+RPIG+G+QGLADTFIL+ LP
Sbjct: 470 REFNHQLLYAVTKQITRNLNRVIDRNYYPVETARRSNMRNRPIGLGVQGLADTFILMRLP 529
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-NITP-S 595
F S EAQ++N +IFETIY+ A+++S ELA ++GPYET+ GSP S+GILQ DMW N P S
Sbjct: 530 FVSAEAQRVNAEIFETIYFAAVESSMELAKEEGPYETFKGSPASEGILQFDMWKNARPNS 589
Query: 596 DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
RWDW+SL+E + + G+RNSLLV+PMPTASTSQILGNNECFEP+TSNIY RRVLSGEF V
Sbjct: 590 GRWDWASLKEKVMQVGIRNSLLVSPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFPV 649
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VNK+L+ DL GLW+ ++ +II NGS+ I IP++LK +Y+TVWEI Q+ L+DMA
Sbjct: 650 VNKYLVMDLIARGLWNEQMRNEIISYNGSILNIDGIPDDLKELYRTVWEIPQRKLIDMAR 709
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
DRG YIDQSQSLN+ ++ P G++TS+ FY W G+KTG+YYLRT+AAADAIKFTVD
Sbjct: 710 DRGQYIDQSQSLNLFLQSPTSGQITSMLFYGWEAGLKTGVYYLRTKAAADAIKFTVDAKR 769
Query: 776 LNNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
L + + ++ + EEC+ CGS
Sbjct: 770 LKEIQERESSQQTMSS-----HRVSQPEECLNCGS 799
>gi|307180389|gb|EFN68415.1| Ribonucleoside-diphosphate reductase large subunit [Camponotus
floridanus]
Length = 889
Score = 978 bits (2528), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/778 (59%), Positives = 589/778 (75%), Gaps = 20/778 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+GRKE V FDKIT+R+ K Y L + DP VA +V G+Y GVTT LD LA
Sbjct: 32 MHVIKRNGRKEDVHFDKITSRIAKQCYNLDMNYVDPSAVAIQVIRGLYSGVTTVILDNLA 91
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA M NHPDYA+LA R+ VSNLHK TK +FS+ + D+Y+ + + + ++ +
Sbjct: 92 AETAATMATNHPDYAILAARIDVSNLHKETKKNFSKVMHDLYHARDSVTNQHTPIINERY 151
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y II NA LD AIIYDRDF ++Y GFKTLERSYLLK++ ++VERPQHMLMRV+VGIH+
Sbjct: 152 YNIIKNNAEKLDSAIIYDRDFSYNYIGFKTLERSYLLKINGKIVERPQHMLMRVAVGIHE 211
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D A++TY+ +S+ +FTHA+PTLFNA T Q+SSCFLL + +DSI+GI+ TLKKCA+
Sbjct: 212 TDIDKAIETYNYLSERYFTHASPTLFNACTNNQQMSSCFLLTLDNDSIKGIFGTLKKCAL 271
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL++H IRA + ++NG+V +L+++ND A YVDQGG KR GAFAIY
Sbjct: 272 ISKYAGGIGLNVHCIRAKST--EDNTDTTNGLVSVLKLYNDMAIYVDQGGNKRPGAFAIY 329
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+FL+LR+N G RARDLFY LW+PDLFMERV ++ WSL CP ++ GLA
Sbjct: 330 LEPWHADIFDFLELRRNIGDGNMRARDLFYGLWIPDLFMERVYNNENWSLMCPHESPGLA 389
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EF+ LY +YE+EGR K + AR +W IL SQ+ETGTPYML+KD CNRKSN Q++
Sbjct: 390 DVWGDEFKELYIRYEKEGRYKKQVEARAVWVAILRSQVETGTPYMLYKDHCNRKSNHQHI 449
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTE++++S P E AVCNLASIA+ +V ++ N+ F
Sbjct: 450 GTIKCSNLCTEVIQYSGPGEVAVCNLASIAVNMFV------------------NTNNKTF 491
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L + K++T NL+K+IDVN YPI T+ SN +HRPIGIGIQGLAD F+L+ PFES
Sbjct: 492 DFDKLKTIAKVVTRNLDKVIDVNFYPIVETKTSNQKHRPIGIGIQGLADAFLLMRYPFES 551
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFET+YY AL+AS +LA + G YETY GSP+SKGILQ DMWN+ P++ WDW
Sbjct: 552 KEAKELNIKIFETLYYGALEASCKLAAEKGTYETYEGSPVSKGILQYDMWNVKPTNLWDW 611
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY RRVLSGEF++VN HL
Sbjct: 612 DKLKEKIAKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYVRRVLSGEFVIVNPHL 671
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DLT GLW ++ +I+ GSV I IP++LK +YKTVWEI QK +++MAADRG +
Sbjct: 672 LRDLTARGLWDEDMQNEILASFGSVQNIDRIPDDLKVLYKTVWEIPQKVILEMAADRGAF 731
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN 778
IDQSQSLN+H+ P KLTS+HF+ W G+KTGMYYLRT+ AA+ I+FTVD S L N
Sbjct: 732 IDQSQSLNVHIGDPTTEKLTSMHFFGWRSGLKTGMYYLRTKPAANPIQFTVDKSKLRN 789
>gi|340059001|emb|CCC53372.1| putative ribonucleoside-diphosphate reductase large chain
[Trypanosoma vivax Y486]
Length = 799
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/826 (56%), Positives = 599/826 (72%), Gaps = 43/826 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKR+G EP ++ RL+ + G+ + + ++ + V AG Y + TT LD L
Sbjct: 1 MNVIKRNGSIEPFSRMELMERLEAIGEGIDRNYVSFEMIVETVAAGAYDNIQTTVLDTLL 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA HP Y LL GR++V+ LH+IT + E MYN+ + S + A L++D+
Sbjct: 61 AETAAYAVTKHPHYGLLGGRISVTALHRITHSDVLEAFGVMYNHLSHTSREHAPLISDET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMD-----SRVVERPQHMLMRVS 175
+ II K + L+ I Y RD +++YFG+KTLERSYLL+ D + V+ERPQ M++RV+
Sbjct: 121 WGIIKKRSKELNEIIDYKRDLNYEYFGYKTLERSYLLRADRGIGNTEVIERPQQMILRVA 180
Query: 176 VGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
+GIH DD + +TY LMS +FTHA+PTLFNAGTP+PQ+SSCFLL M+DDSIEGIYDTL
Sbjct: 181 IGIHGDDIEHIKETYDLMSLGFFTHASPTLFNAGTPRPQMSSCFLLAMRDDSIEGIYDTL 240
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+CAIISK+AGGIG+ +HNIR++GSYI GTNG+SNG+VPML+V+N+TARYVDQGGGKRKG
Sbjct: 241 KQCAIISKAAGGIGIHVHNIRSTGSYIKGTNGTSNGLVPMLRVWNNTARYVDQGGGKRKG 300
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
AFAIYLEPWHADIF+F+ L++N GKEE RARDLFY LW+PDLFM+RV + KW+L P
Sbjct: 301 AFAIYLEPWHADIFKFISLKRNTGKEEHRARDLFYGLWIPDLFMKRVEEGKKWTLMDPKT 360
Query: 356 ASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKS 415
A GL+D +G EFE Y +YE+E R ++A+ LW IL SQIETG P+ML+KD+CNRKS
Sbjct: 361 APGLSDCYGEEFERKYEKYEKENRGTDSVAAQDLWSAILQSQIETGGPFMLYKDACNRKS 420
Query: 416 NQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDS 475
NQ+NLGTIK SNLCTEI++F+S +E AVCNLASIALPR+V
Sbjct: 421 NQKNLGTIKCSNLCTEIIQFTSKDEVAVCNLASIALPRFV-------------------- 460
Query: 476 KNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLG 535
KN FD L VTK++T NLNK+ID N YP+ SN+RHRPIGIG+QGLADTF L
Sbjct: 461 KNGTFDHHELHRVTKVVTRNLNKVIDRNTYPVREAEASNMRHRPIGIGVQGLADTFACLR 520
Query: 536 LPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN---- 591
PF SP+A++LNK+IFETIYY A++AS ELA G YE++ GSP S+G+LQ D+W
Sbjct: 521 YPFASPDAKKLNKEIFETIYYSAVEASVELAETHGSYESFAGSPASEGLLQPDLWEKELV 580
Query: 592 -------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+T S RWDW+ LRE + K+G+RNSLLVAPMPTASTSQILGNNEC EP+TSNIY
Sbjct: 581 QKGRKPVLTCSGRWDWTMLRERVMKSGMRNSLLVAPMPTASTSQILGNNECIEPFTSNIY 640
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
RRVLSGEF +VNK+L+ DL + G+W+ ++ +II NGS+ I IP++LK +YK VWE
Sbjct: 641 VRRVLSGEFPIVNKYLVIDLIKDGMWNDEMRNQIIAHNGSIQNIPGIPDKLKELYKVVWE 700
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
IKQ+ L+DMA DRG YIDQSQSLNI +E P +LTS+HFYAW G+KTGMYYLR++ AA
Sbjct: 701 IKQRDLIDMAVDRGHYIDQSQSLNIFLESPTLPQLTSMHFYAWKSGLKTGMYYLRSKPAA 760
Query: 765 DAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
DAIKFT+D L K +AD+ ++A + EC+ CG+
Sbjct: 761 DAIKFTIDPKKL---KEMQADSALQAQRHYAT----TEGECLNCGA 799
>gi|71755889|ref|XP_828859.1| ribonucleoside-diphosphate reductase large chain [Trypanosoma
brucei]
gi|70834245|gb|EAN79747.1| ribonucleoside-diphosphate reductase large chain [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 838
Score = 970 bits (2508), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/792 (59%), Positives = 591/792 (74%), Gaps = 38/792 (4%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V KRDG EP + +R+ L G+ + D + + V GV +G++T+ LDEL AE
Sbjct: 8 VTKRDGSVEPYDEKVVRSRIVNLMSGIDSYYVDVDDLVRVVGEGVREGMSTSMLDELLAE 67
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA HPDY LLAGR+AV+ LHK T S ++ + ++ + ++ + + A L+++++++
Sbjct: 68 TAAYCVTKHPDYGLLAGRLAVTALHKTTTESVLDSFRVLHEHVSQATRRHAPLISEELWD 127
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS-----RVVERPQHMLMRVSVG 177
I K++A L I Y+RDFDF+YFG+KTLERSYLL++D VVERPQ M +RV++G
Sbjct: 128 IANKHSAALQQIINYERDFDFEYFGYKTLERSYLLRVDKGRGVMEVVERPQQMFLRVALG 187
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
IH +D + +TY MSQ +FTHATPTLFNAGTP PQ+SSCFL+ M++DSI+GIYDTLK+
Sbjct: 188 IHGEDLERVKETYDYMSQGFFTHATPTLFNAGTPFPQMSSCFLVAMREDSIDGIYDTLKQ 247
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
CAIISKSAGGIG+ +HNIRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGGGKRKGAF
Sbjct: 248 CAIISKSAGGIGIHMHNIRAAGSYIAGTNGTSNGLVPMLRVWNNTARYVDQGGGKRKGAF 307
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
AIYLEPWHADIF FL L+KN GKE+ RARDLFY LW+PDLFMERV G W+L P+ A
Sbjct: 308 AIYLEPWHADIFGFLLLKKNTGKEDQRARDLFYGLWIPDLFMERVESHGTWTLMDPNTAP 367
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
L+D +G EF LY +YE EGR I A++LWF IL SQ+ETG P+ML+KD+CN KSNQ
Sbjct: 368 FLSDCYGQEFTDLYERYEREGRGVRTIQAQELWFLILESQVETGVPFMLYKDACNFKSNQ 427
Query: 418 QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKN 477
+NLGTIK SNLCTEIVE++S +E AVCNLASIALPR+V K+
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSRDEVAVCNLASIALPRFV--------------------KD 467
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
FD+ L EVTK++T NLN++ID NHYP+ R SNLRHRP+GIG+QGLADTF LL LP
Sbjct: 468 GAFDYVALKEVTKVVTRNLNRVIDRNHYPVREARYSNLRHRPVGIGVQGLADTFALLSLP 527
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR 597
F PEA++LN+ IFETIY+ A++AS ELA KDGPYET+ GSP S+G LQ D+W+ R
Sbjct: 528 FAHPEAKKLNRQIFETIYFAAVEASTELAEKDGPYETFKGSPASEGKLQFDLWDEERRIR 587
Query: 598 -------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
WDW SL+E + K G+RNSLLVAPMPTASTSQILGNNEC EP+TSNIY
Sbjct: 588 GMNEDSVHSHCGLWDWDSLKERVVKVGMRNSLLVAPMPTASTSQILGNNECIEPFTSNIY 647
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
RRVLSGEF VVNKHL+K+L L LW+ ++ KII NGSVS I EIPE ++ +YK VWE
Sbjct: 648 VRRVLSGEFPVVNKHLVKELIRLQLWNDDMRRKIIALNGSVSGIKEIPERIRELYKVVWE 707
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I+QK L+DMAADRG YIDQSQSLN+ + P +LTS+HFY+W KG+KTGMYYLR++ AA
Sbjct: 708 IRQKDLIDMAADRGRYIDQSQSLNLFLGTPTSSQLTSMHFYSWKKGLKTGMYYLRSQPAA 767
Query: 765 DAIKFTVDTSVL 776
DAIKFT+D +
Sbjct: 768 DAIKFTLDPKAM 779
>gi|71422050|ref|XP_812008.1| ribonucleoside-diphosphate reductase large chain [Trypanosoma cruzi
strain CL Brener]
gi|70876737|gb|EAN90157.1| ribonucleoside-diphosphate reductase large chain, putative
[Trypanosoma cruzi]
Length = 796
Score = 970 bits (2508), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/816 (56%), Positives = 601/816 (73%), Gaps = 31/816 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+ V KRDG + +K+ AR++++S+GL + D ++ + V GV+ ++T +LD+L
Sbjct: 6 LTVRKRDGSLQSFDANKLFARIERVSHGLDPNYVDVKILTEIVVGGVHDEISTVELDKLI 65
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA HPDY L+ GR+ V+ LHK T S ET ++ + +G+ A L++D+V
Sbjct: 66 AETAAYSVTKHPDYGLMGGRLCVTALHKTTSASVLETFSILHKHKIHDTGRAAPLLSDEV 125
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS-----RVVERPQHMLMRVS 175
+E++ ++ L + YDRD F++FG+KTLERSYLL++D + ERPQ M +RV+
Sbjct: 126 WEVVQRHHEQLQRMVNYDRDMRFEFFGYKTLERSYLLRVDRGRGEREIAERPQQMFLRVA 185
Query: 176 VGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
+GIH +D + +TY MS FTHATPTLFNAGTP PQ+SSCFL+ M++DSIEGIYDTL
Sbjct: 186 LGIHGEDMERVKETYDHMSLGDFTHATPTLFNAGTPFPQMSSCFLVAMREDSIEGIYDTL 245
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+CA+ISKSAGGIG+ +HNIR SGSYI GTNG SNG+VPML+V+N+TARYVDQGGGKRKG
Sbjct: 246 KQCAVISKSAGGIGVHVHNIRCSGSYIAGTNGQSNGLVPMLRVWNNTARYVDQGGGKRKG 305
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
AFAIYLEPWH DIF FL L+KN GKE+ RARDLFYALW+PDLFMERV+ GKW+L P
Sbjct: 306 AFAIYLEPWHGDIFNFLLLKKNTGKEDHRARDLFYALWIPDLFMERVKSGGKWTLMDPHT 365
Query: 356 ASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKS 415
A GL+D +G +F+ LY YE E R + A+ LWF IL SQ+ETG P+ML+KD+CNRKS
Sbjct: 366 APGLSDCYGDDFKKLYEGYERENRGVKTVQAQSLWFAILESQMETGVPFMLYKDACNRKS 425
Query: 416 NQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDS 475
NQ+N+G IK SNLCTEI+E++S +E AVCNLASIALPR+V D
Sbjct: 426 NQKNVGVIKCSNLCTEIIEYTSRDEVAVCNLASIALPRFV------------------DK 467
Query: 476 KNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLG 535
+ R++D +RL EVTKI+T+NLN++ID NHYP+ +RRSN +RPIGIG+QG+ADTFIL+
Sbjct: 468 ERRIYDHQRLYEVTKIVTKNLNRVIDRNHYPVPESRRSNELNRPIGIGVQGMADTFILMR 527
Query: 536 LPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP- 594
LPF EA+ LN+DIFETIYY A++AS ELA +GPY + GSP S+G LQ D+W P
Sbjct: 528 LPFTCQEARTLNEDIFETIYYGAVEASVELAEVEGPYARFAGSPASQGQLQFDLWEQKPR 587
Query: 595 SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFI 654
S RWDW +L++ + K+G+RNSLL+APMPTASTSQILGNNECFEP+TSNIY RRVLSGEF
Sbjct: 588 SGRWDWDALKKRMMKSGMRNSLLLAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFP 647
Query: 655 VVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMA 714
VVNK+L+ DL + GLW+ ++ +II NGSV I IP +LK +Y+ VWEI+QK L++MA
Sbjct: 648 VVNKYLVMDLIKRGLWNEEMRNQIIAYNGSVQNIRGIPNDLKELYRVVWEIRQKDLIEMA 707
Query: 715 ADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
DRG +IDQSQSLN+ +E P +LTS+HF+AW +G+KTGMYYLR++ AADAIKFTVD +
Sbjct: 708 VDRGKFIDQSQSLNLFLENPTSSQLTSMHFFAWERGLKTGMYYLRSKPAADAIKFTVDPN 767
Query: 775 VLNNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
L E + QV + + E+C+ CGS
Sbjct: 768 TLKGLVK-------EDDRKQVSSATPSNEDCLNCGS 796
>gi|407853283|gb|EKG06338.1| hypothetical protein TCSYLVIO_002561 [Trypanosoma cruzi]
Length = 796
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/816 (56%), Positives = 601/816 (73%), Gaps = 31/816 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+ V KRDG + +K+ AR++++S+GL + D ++ + V GV+ ++T +LD+L
Sbjct: 6 LTVRKRDGSLQSFDANKLFARIERVSHGLDPNYVDVKILTEIVVGGVHDEISTVELDKLI 65
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA HPDY L+ GR+ V+ LHK T S ET ++ + +G+ A L++D+V
Sbjct: 66 AETAAYSVTKHPDYGLMGGRLCVTALHKTTSASVLETFSILHKHKIHDTGRAAPLLSDEV 125
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS-----RVVERPQHMLMRVS 175
+EI+ ++ L + YDRD F++FG+KTLERSYLL++D + ERPQ M +RV+
Sbjct: 126 WEIVQRHHEQLQRMVNYDRDMRFEFFGYKTLERSYLLRVDRGRGEREIAERPQQMFLRVA 185
Query: 176 VGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
+GIH +D + +TY MS +FTHATPTLFNAGTP PQ+SSCFL+ M++DSIEGIYDTL
Sbjct: 186 LGIHGEDMERVKETYDHMSLGYFTHATPTLFNAGTPFPQMSSCFLVAMREDSIEGIYDTL 245
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+CA+ISKSAGGIG+ +HNIR SGSYI GTNG SNG+VPML+V+N+TARYVDQGGGKRKG
Sbjct: 246 KQCAVISKSAGGIGVHVHNIRCSGSYIAGTNGQSNGLVPMLRVWNNTARYVDQGGGKRKG 305
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
AFAIYLEPWH DIF FL L+KN GKE+ RARDLFYALW+PDLFMERV+ GKW+L P
Sbjct: 306 AFAIYLEPWHGDIFNFLLLKKNTGKEDHRARDLFYALWIPDLFMERVKSGGKWTLMDPHT 365
Query: 356 ASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKS 415
A GL+D +G +F+ LY YE E R + A+ LWF IL Q+ETG P+ML+KD+CNRKS
Sbjct: 366 APGLSDCYGDDFKKLYEGYERENRGVKTVQAQSLWFAILELQMETGVPFMLYKDACNRKS 425
Query: 416 NQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDS 475
NQ+N+G IK SNLCTEI+E++S +E AVCNLASIALPR+V D
Sbjct: 426 NQKNVGVIKCSNLCTEIIEYTSRDEVAVCNLASIALPRFV------------------DK 467
Query: 476 KNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLG 535
+ +++D +RL EVTKI+T+NLN++ID NHYP+ +RRSN +RPIGIG+QG+ADTFIL+
Sbjct: 468 ERKIYDHQRLYEVTKIVTKNLNRVIDRNHYPVPESRRSNELNRPIGIGVQGMADTFILMR 527
Query: 536 LPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP- 594
LPF EA+ LN+DIFETIYY A++AS ELA +GPY + GSP S+G LQ D+W P
Sbjct: 528 LPFTCQEARTLNEDIFETIYYGAVEASVELAEVEGPYARFAGSPASQGQLQFDLWEQKPR 587
Query: 595 SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFI 654
S RWDW +L++ + K+G+RNSLL+APMPTASTSQILGNNECFEP+TSNIY RRVLSGEF
Sbjct: 588 SGRWDWDALKKRMMKSGMRNSLLLAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFP 647
Query: 655 VVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMA 714
VVNK+L+ DL + GLW+ ++ +II NGSV I IP +LK +Y+ VWEI+QK L++MA
Sbjct: 648 VVNKYLVMDLIKRGLWNEEMRNQIIAYNGSVQNIRGIPNDLKELYRVVWEIRQKDLIEMA 707
Query: 715 ADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
DRG +IDQSQSLN+ +E P +LTS+HF+AW +G+KTGMYYLR++ AADAIKFTVD +
Sbjct: 708 VDRGKFIDQSQSLNLFLENPTSSQLTSMHFFAWERGLKTGMYYLRSKPAADAIKFTVDPN 767
Query: 775 VLNNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
L E + QV + + E+C+ CGS
Sbjct: 768 TLKGLVK-------EDDRKQVSSATPSNEDCLNCGS 796
>gi|193669060|ref|XP_001942710.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 1 [Acyrthosiphon pisum]
gi|328715730|ref|XP_003245707.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 2 [Acyrthosiphon pisum]
Length = 802
Score = 968 bits (2502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/811 (55%), Positives = 605/811 (74%), Gaps = 21/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
++V KRDGR E V DKIT R+++L GL+ + DP + V + G++T Q+D LA
Sbjct: 12 LFVKKRDGRMEEVMMDKITMRIEQLCEGLNMDFIDPPEITLFVIGDICPGISTVQIDNLA 71
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPD+A+LA R+A+SNL+K TKN+FS+ I D+YN N+R+ ++ +++D
Sbjct: 72 AETAAYLTTKHPDFAVLAARIAISNLYKETKNNFSDVIYDLYNMSNERNQRRMKIISDFH 131
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y ++MK+A L+ AI +DRD+ + YFGFKTLE+SYLLK++ +VVERPQH+LMRVS+GIH
Sbjct: 132 YGVVMKHADRLNNAIKHDRDYTYSYFGFKTLEKSYLLKINGKVVERPQHLLMRVSIGIHG 191
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY LMS +FTHA+PT+FNA TP+PQLSSCFL+ K DS+E T+K CA
Sbjct: 192 EDIDAAIETYDLMSSKYFTHASPTMFNAATPRPQLSSCFLVANKSDSLEDFGKTVKTCAK 251
Query: 241 ISKSAGGIGLSIHNIRASGS-YIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAI 299
IS+S+GGIG+ +HNI A+G+ + S+G+V L+V ND A+YVDQGG KR GA A+
Sbjct: 252 ISQSSGGIGIHLHNISAAGTTWTKYPRHESHGLVEPLKVLNDLAQYVDQGG-KRPGAVAV 310
Query: 300 YLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGL 359
Y+EPWHAD++ + +LRKN G +E + RDLF ALW+PD FM RV D WSL CP GL
Sbjct: 311 YIEPWHADVYTYTELRKNTGNKEEKTRDLFLALWIPDEFMRRVEADQSWSLMCPRKCPGL 370
Query: 360 ADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQN 419
+D WG +F LY +YE+E R +SAR+LWF I+ SQIETG PY+L+KD+CN KSNQ+N
Sbjct: 371 SDVWGDDFVKLYKKYEDEKRYNRQVSARELWFRIITSQIETGMPYVLYKDACNSKSNQKN 430
Query: 420 LGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRL 479
LGTIK SNLCTEI++++S EE AVCNLASIA+ +V+ G
Sbjct: 431 LGTIKCSNLCTEIIQYTSSEEVAVCNLASIAVNMFVKPNGE------------------- 471
Query: 480 FDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFE 539
+DFE+L ++TKI+T+NLN++IDVN YP+ SN RHRP+GIG+QGLAD F+L+ PF
Sbjct: 472 YDFEKLLKITKIVTKNLNRVIDVNFYPVIEAETSNKRHRPVGIGVQGLADLFLLMRFPFG 531
Query: 540 SPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWD 599
SPE+++LN IFET+YY AL+AS ELA K G Y +Y GSP+S+GILQ DMWN+ P+D WD
Sbjct: 532 SPESRKLNSQIFETLYYGALEASCELAEKYGTYSSYQGSPISQGILQYDMWNVKPTDLWD 591
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L+E I+K+GVRNSLL+APMPTAST+QILGNNE EPYT+N+Y RR LSGEF VVN+H
Sbjct: 592 WDILKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTTNLYYRRTLSGEFSVVNRH 651
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL DL +L LW+ ++ ++IY GSV KI IP+ +K +YKT WE+ QK ++DMAADR
Sbjct: 652 LLNDLIKLNLWNEDMRNELIYYKGSVQKIKSIPDNIKELYKTNWELSQKIILDMAADRAA 711
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
+IDQSQSLNIH+EQP GK++S+HFY W KG+KTGMYYLRTR AAD I+FTV+ S L++
Sbjct: 712 FIDQSQSLNIHIEQPTIGKISSVHFYGWKKGLKTGMYYLRTRPAADPIQFTVNKSTLSSN 771
Query: 780 KANRADNDVEANLAQVVCSLKNQEECMACGS 810
A + + + ++ ++VCSL+N++ C CG+
Sbjct: 772 IAIQTEKNDALSMQELVCSLENKDACTMCGA 802
>gi|261334781|emb|CBH17775.1| ribonucleoside-diphosphate reductase large chain [Trypanosoma
brucei gambiense DAL972]
Length = 838
Score = 967 bits (2500), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/792 (59%), Positives = 590/792 (74%), Gaps = 38/792 (4%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V KRDG EP + +R+ L G+ + D + + V GV +G++T+ LDEL AE
Sbjct: 8 VTKRDGSVEPYDEKVVRSRIVNLMSGIDSYYVDVDDLVRVVGEGVREGMSTSMLDELLAE 67
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA HPDY LLAGR+AV+ LHK T S ++ + ++ + ++ + + A L+++++++
Sbjct: 68 TAAYCVTKHPDYGLLAGRLAVTALHKTTTESVLDSFRVLHEHVSQATKRHAPLISEELWD 127
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS-----RVVERPQHMLMRVSVG 177
I K++A L I Y+RDFDF+YFG+KTLERSYLL++D VVERPQ M +RV++G
Sbjct: 128 IANKHSAALQQIINYERDFDFEYFGYKTLERSYLLRVDKGRGVMEVVERPQQMFLRVALG 187
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
IH +D + +TY MSQ +FTHATPTLFNAGTP PQ+SSCFL+ M++DSI+GIYDTLK+
Sbjct: 188 IHGEDLERVKETYDYMSQGFFTHATPTLFNAGTPFPQMSSCFLVAMREDSIDGIYDTLKQ 247
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
CAIISKSAGGIG+ +HNIRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGGGKRKGAF
Sbjct: 248 CAIISKSAGGIGIHMHNIRAAGSYIAGTNGTSNGLVPMLRVWNNTARYVDQGGGKRKGAF 307
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
AIYLEPWHADIF FL L+KN GKE+ RARDLFY LW+PDLFMERV G W+L P+ A
Sbjct: 308 AIYLEPWHADIFGFLLLKKNTGKEDQRARDLFYGLWIPDLFMERVESHGTWTLMDPNTAP 367
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
L+D +G EF LY +YE EGR I A++LWF IL SQ+ETG P+ML+KD+CN KSNQ
Sbjct: 368 FLSDCYGQEFTDLYERYEREGRGVRTIQAQELWFLILESQVETGVPFMLYKDACNFKSNQ 427
Query: 418 QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKN 477
+NLGTIK SNLCTEIVE++S +E AVCNLASIALPR+V K+
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSRDEVAVCNLASIALPRFV--------------------KD 467
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
FD+ L EVTK++T NLN++ID NHYP+ R SNLRHRP+GIG+QGLAD F LL LP
Sbjct: 468 GAFDYVALKEVTKVVTRNLNRVIDRNHYPVCEARYSNLRHRPVGIGVQGLADAFALLSLP 527
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR 597
F PEA++LN+ IFETIY+ A++AS ELA KDGPYET+ GSP S+G LQ D+W+ R
Sbjct: 528 FAHPEAKKLNRQIFETIYFAAVEASTELAEKDGPYETFKGSPASEGKLQFDLWDEERRIR 587
Query: 598 -------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
WDW SL+E + K G+RNSLL+APMPTASTSQILGNNEC EP+TSNIY
Sbjct: 588 GMNEDSVHSHCGLWDWDSLKERVVKVGMRNSLLIAPMPTASTSQILGNNECIEPFTSNIY 647
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
RRVLSGEF VVNKHL+K+L L LW+ ++ KII NGSVS I EIPE ++ +YK VWE
Sbjct: 648 VRRVLSGEFPVVNKHLVKELIRLRLWNDDMRRKIIALNGSVSGIKEIPERIRELYKVVWE 707
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I+QK L+DMAADRG YIDQSQSLN+ + P +LTS+HFY+W KG+KTGMYYLR++ AA
Sbjct: 708 IRQKDLIDMAADRGRYIDQSQSLNLFLATPTSSQLTSMHFYSWKKGLKTGMYYLRSQPAA 767
Query: 765 DAIKFTVDTSVL 776
DAIKFT+D +
Sbjct: 768 DAIKFTLDPKAM 779
>gi|328722843|ref|XP_003247688.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Acyrthosiphon pisum]
Length = 802
Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/811 (55%), Positives = 605/811 (74%), Gaps = 21/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
++V KRDGR E V DKIT R+++L GL+ + DP + V + G++T Q+D LA
Sbjct: 12 LFVKKRDGRMEEVMMDKITMRIEQLCEGLNMDFIDPPEITLFVIGDICPGISTVQIDNLA 71
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPD+A+LA R+A+SNL+K TKN+FS+ I D+YN N+R+ ++ +++D
Sbjct: 72 AETAAYLTTKHPDFAVLAARIAISNLYKETKNNFSDVIYDLYNMSNERNQRRMKIISDFH 131
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y ++MK+A L+ AI +DRD+ + YFGFKTLE+SYLLK++ +VVERPQH+LMRVS+GIH
Sbjct: 132 YGVVMKHADRLNNAIKHDRDYTYSYFGFKTLEKSYLLKINGKVVERPQHLLMRVSIGIHG 191
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY LMS +FTHA+PT+FNA TP+PQLSSCFL+ K DS+E T+K CA
Sbjct: 192 EDIDAAIETYDLMSSKYFTHASPTMFNAATPRPQLSSCFLVANKSDSLEDFGKTVKTCAK 251
Query: 241 ISKSAGGIGLSIHNIRASGS-YIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAI 299
IS+S+GGIG+ +HNI A+G+ + S+G+V L+V ND A+YVDQGG KR GA A+
Sbjct: 252 ISQSSGGIGIHLHNISAAGTTWTKYPRHESHGLVEPLKVLNDLAQYVDQGG-KRPGAVAV 310
Query: 300 YLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGL 359
Y+EPWHAD++ + +LRKN G +E + RDLF ALW+PD FM RV + WSL CP GL
Sbjct: 311 YIEPWHADVYTYTELRKNTGNKEEKTRDLFLALWIPDEFMRRVEANQSWSLMCPRKCPGL 370
Query: 360 ADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQN 419
+D WG +F LY +YE+E R +SAR+LWF I+ SQIETG PY+L+KD+CN KSNQ+N
Sbjct: 371 SDVWGDDFVKLYKKYEDEKRYNRQVSARELWFRIITSQIETGMPYVLYKDACNSKSNQKN 430
Query: 420 LGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRL 479
LGTIK SNLCTEI++++S EE AVCNLASIA+ +V+ G
Sbjct: 431 LGTIKCSNLCTEIIQYTSSEEVAVCNLASIAVNMFVKPNGE------------------- 471
Query: 480 FDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFE 539
+DFE+L ++TKI+T+NLN++IDVN YP+ SN RHRP+GIG+QGLAD F+L+ PF
Sbjct: 472 YDFEKLLKITKIVTKNLNRVIDVNFYPVIEAETSNKRHRPVGIGVQGLADLFLLMRFPFG 531
Query: 540 SPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWD 599
SPE+++LN IFET+YY AL+AS ELA K G Y +Y GSP+S+GILQ DMWN+ P+D WD
Sbjct: 532 SPESRKLNSQIFETLYYGALEASCELAEKYGTYSSYQGSPISQGILQYDMWNVKPTDLWD 591
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L+E I+K+GVRNSLL+APMPTAST+QILGNNE EPYT+N+Y RR LSGEF VVN+H
Sbjct: 592 WDILKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTTNLYYRRTLSGEFSVVNRH 651
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL DL +L LW+ ++ ++IY GSV KI IP+ +K +YKT WE+ QK ++DMAADR
Sbjct: 652 LLNDLIKLNLWNEDMRNELIYYKGSVQKIKSIPDNIKELYKTNWELSQKIILDMAADRAA 711
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
+IDQSQSLNIH+EQP GK++S+HFY W KG+KTGMYYLRTR AAD I+FTV+ S L++
Sbjct: 712 FIDQSQSLNIHIEQPTIGKISSVHFYGWKKGLKTGMYYLRTRPAADPIQFTVNKSTLSSN 771
Query: 780 KANRADNDVEANLAQVVCSLKNQEECMACGS 810
A + + + ++ ++VCSL+N++ C CG+
Sbjct: 772 IAIQTEKNDALSMQELVCSLENKDACTMCGA 802
>gi|407420213|gb|EKF38496.1| origin recognition complex subunit 1, putative,cell division cycle
6, putative [Trypanosoma cruzi marinkellei]
Length = 796
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/816 (56%), Positives = 599/816 (73%), Gaps = 31/816 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+ V KRDG + K+ AR++++S+GL + D + + V GV+ ++T +LD+L
Sbjct: 6 LTVRKRDGSLQSFDASKVFARIERVSHGLDPNYVDVKTLTEIVVGGVHDEISTIELDKLI 65
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA HPDY L+ GR++V+ LHK T S ET ++ + +G++A L++D+V
Sbjct: 66 AETAAYSVTKHPDYGLMGGRLSVTALHKTTSASVLETFSILHKHKIHDTGREAPLLSDEV 125
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS-----RVVERPQHMLMRVS 175
+E++ ++ L + Y+RD F++FG+KTLERSYLL++D + ERPQ M +RV+
Sbjct: 126 WEVVQRHHEQLQRMVDYNRDMRFEFFGYKTLERSYLLRVDKGRGEREIAERPQLMFLRVA 185
Query: 176 VGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
+GIH +D + +TY MS FTHATPTLFNAGTP PQ+SSCFL+ M++DSIEGIYDTL
Sbjct: 186 LGIHGEDMERVKETYDHMSLGDFTHATPTLFNAGTPFPQMSSCFLVAMREDSIEGIYDTL 245
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+CA+ISKSAGGIG+ +HNIR SGSYI GTNG SNG+VPML+V+N+TARYVDQGGGKRKG
Sbjct: 246 KQCAVISKSAGGIGVHVHNIRCSGSYIAGTNGQSNGLVPMLRVWNNTARYVDQGGGKRKG 305
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
AFAIYLEPWH DIF FL L+KN GKE+ RARDLFYALW+PDLFMERV+ GKW+L P
Sbjct: 306 AFAIYLEPWHGDIFNFLLLKKNTGKEDQRARDLFYALWIPDLFMERVKSGGKWTLMDPHT 365
Query: 356 ASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKS 415
A GL+D +G +F+ LY YE E R + A+ LWF IL SQ+ETG P+ML+KD+CNRKS
Sbjct: 366 APGLSDCYGDDFKKLYEGYERENRGVKTVQAQSLWFAILESQMETGVPFMLYKDACNRKS 425
Query: 416 NQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDS 475
NQ+N+G IK SNLCTEI+E++S +E AVCNLASIALPR+V D
Sbjct: 426 NQKNIGVIKCSNLCTEIIEYTSKDEVAVCNLASIALPRFV------------------DK 467
Query: 476 KNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLG 535
+ R++D +RL EVTKI+T+NLN++ID NHYP+ +RRSN +RPIGIG+QG+ADTFIL+
Sbjct: 468 EKRMYDHQRLYEVTKIVTKNLNRVIDRNHYPVPESRRSNELNRPIGIGVQGMADTFILMR 527
Query: 536 LPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP- 594
LPF EA+ LN+DIFETIYY A++AS ELA +GPY + GSP S+G LQ D+W P
Sbjct: 528 LPFTCQEARTLNEDIFETIYYGAVEASVELAEVEGPYARFAGSPASQGQLQFDLWEQKPR 587
Query: 595 SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFI 654
S RWDW +L+ + K+G+RNSLL+APMPTASTSQILGNNECFEP+TSNIY RRVLSGEF
Sbjct: 588 SGRWDWDALKRRVMKSGMRNSLLLAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFP 647
Query: 655 VVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMA 714
VVNK+L+ DL + GLW+ ++ +II NGSV I IP +LK +Y+ VWEI+QK L++MA
Sbjct: 648 VVNKYLVMDLIKRGLWNEEMRNQIIAYNGSVQNIKGIPNDLKELYRVVWEIRQKDLIEMA 707
Query: 715 ADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
DRG +IDQSQSLN+ +E P +LTS+HF+AW +G+KTGMYYLR++ AADAIKFTVD +
Sbjct: 708 VDRGKFIDQSQSLNLFLENPTSSQLTSMHFFAWERGLKTGMYYLRSKPAADAIKFTVDPN 767
Query: 775 VLNNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
L E + Q + + E+C+ CGS
Sbjct: 768 TLKGLVK-------EDDRKQFSSATPSNEDCLNCGS 796
>gi|3914639|sp|O15909.1|RIR1_TRYBB RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase R1 subunit
gi|2411477|gb|AAB70704.1| ribonucleotide reductase large subunit [Trypanosoma brucei]
Length = 838
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/792 (59%), Positives = 588/792 (74%), Gaps = 38/792 (4%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V KRDG EP + +R+ L G+ + D + + V GV +G++T+ LDEL AE
Sbjct: 8 VTKRDGSVEPYDEKVVRSRIVNLMSGIDSYYVDVDDLVRVVGEGVREGMSTSMLDELLAE 67
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA HPDY LLAGR+AV+ LHK T S ++ + ++ + ++ + + A L+++++++
Sbjct: 68 TAAYCVTKHPDYGLLAGRLAVTALHKTTTESVLDSFRVLHEHVSQATKRHAPLISEELWD 127
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS-----RVVERPQHMLMRVSVG 177
I K++A L I Y+RDFDF+YFG+KTLERSYLL++ VVERPQ M +RV++G
Sbjct: 128 IANKHSAALQQIINYERDFDFEYFGYKTLERSYLLRVHKGRGVMEVVERPQQMFLRVALG 187
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
IH +D + +TY MSQ +FTHATPTLFNAGTP PQ+SSCFL+ M++DSI+GIYDTLK+
Sbjct: 188 IHGEDLERVKETYDYMSQGFFTHATPTLFNAGTPFPQMSSCFLVAMREDSIDGIYDTLKQ 247
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
CAIISKSAGGIG+ +HNIRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGGGKRKGAF
Sbjct: 248 CAIISKSAGGIGIHMHNIRAAGSYIAGTNGTSNGLVPMLRVWNNTARYVDQGGGKRKGAF 307
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
AIYLEPWHADIF FL L+KN GKE+ RARDLFY LW+PDLFMERV G W+L P+ A
Sbjct: 308 AIYLEPWHADIFGFLLLKKNTGKEDQRARDLFYGLWIPDLFMERVESHGTWTLMDPNTAP 367
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
L+D +G EF LY +YE EGR I A++LWF IL SQ+ETG P+ML+KD+CN KSNQ
Sbjct: 368 FLSDCYGQEFTDLYERYEREGRGVRTIQAQELWFLILESQVETGVPFMLYKDACNFKSNQ 427
Query: 418 QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKN 477
+NLGTIK SNLCTEIVE++S +E AVCNLASIALPR+V K+
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSRDEVAVCNLASIALPRFV--------------------KD 467
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
FD+ L EVTK++T NLN++ID NHYP+ R SNLRHRP+GIG+QGLAD F LL LP
Sbjct: 468 GAFDYVALKEVTKVVTRNLNRVIDRNHYPVCEARYSNLRHRPVGIGVQGLADAFALLSLP 527
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR 597
F PEA++LN+ IFETIY A++AS ELA KDGPYET+ GSP S+G LQ D+W+ R
Sbjct: 528 FAHPEAKKLNRQIFETIYIAAVEASTELAEKDGPYETFKGSPASEGKLQFDLWDEERRIR 587
Query: 598 -------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
WDW SL+E + K G+RNSLL+APMPTASTSQILGNNEC EP+TSNIY
Sbjct: 588 GMNEDSVHSHCGLWDWDSLKERVVKVGMRNSLLIAPMPTASTSQILGNNECIEPFTSNIY 647
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
RRVLSGEF VVNKHL+K+L L LW+ ++ KII NGSVS I EIPE ++ +YK VWE
Sbjct: 648 VRRVLSGEFPVVNKHLVKELIRLRLWNDDMRRKIIALNGSVSGIKEIPERIRELYKVVWE 707
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I+QK L+DMAADRG YIDQSQSLN+ + P +LTS+HFY+W KG+KTGMYYLR++ AA
Sbjct: 708 IRQKDLIDMAADRGRYIDQSQSLNLFLATPTSSQLTSMHFYSWKKGLKTGMYYLRSQPAA 767
Query: 765 DAIKFTVDTSVL 776
DAIKFT+D +
Sbjct: 768 DAIKFTLDPKAM 779
>gi|193608391|ref|XP_001944671.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Acyrthosiphon pisum]
Length = 802
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/811 (55%), Positives = 597/811 (73%), Gaps = 21/811 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
++V KRDGR E V DKIT R+++L GL+ + DP + V + G+TT Q+D LA
Sbjct: 12 LFVKKRDGRLEEVLMDKITLRIEQLCDGLNMDFIDPPEITLYVIGDLCPGITTVQIDNLA 71
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPD+A+LA R+A+SNL+K TK +FS+ I D+YN N+R+ + +++D
Sbjct: 72 AETAAYLTTKHPDFAVLAARIAISNLYKETKENFSDVIYDLYNMSNERNQSRMPIISDFH 131
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y I+MK+A L+ AI +DRD+ + YFGFKTLE+SYLLK+D +VVERPQH+LMRVS+GIH
Sbjct: 132 YGIVMKHADRLNNAIKHDRDYTYSYFGFKTLEKSYLLKIDGKVVERPQHLLMRVSIGIHG 191
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY LMS +FTHA+PT+FNA TP+PQLSSCFL+ K D +E T+K CA
Sbjct: 192 EDIDAAIETYDLMSLKYFTHASPTMFNASTPRPQLSSCFLVANKSDELEDFGKTVKTCAK 251
Query: 241 ISKSAGGIGLSIHNIRASGS-YIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAI 299
IS+SAGGIG+ +HN+ A+G+ + S+G+V L+V ND A+Y+DQGG +R GA A+
Sbjct: 252 ISQSAGGIGVHLHNVGAAGTKWTKYPKCESHGLVEPLKVLNDLAQYIDQGG-RRPGAVAV 310
Query: 300 YLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGL 359
Y+EPWHADI+ + +LRKN G +E + RDLF ALW+PD FM RV + WSL CP GL
Sbjct: 311 YIEPWHADIYTYTELRKNTGNKEEKTRDLFLALWIPDEFMRRVEANQSWSLMCPRKCPGL 370
Query: 360 ADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQN 419
+D WG +F LY +YE+E + AR+LWF I+ SQIETG PYML+KD+CN KSNQ+N
Sbjct: 371 SDVWGDDFVKLYKKYEDEKLYNKQVPARELWFRIITSQIETGMPYMLYKDACNAKSNQKN 430
Query: 420 LGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRL 479
LGTIK SNLCTE+++++S EE AVCNLASIA+ +V+ G
Sbjct: 431 LGTIKCSNLCTEVIQYTSEEEVAVCNLASIAVNMFVKPNGE------------------- 471
Query: 480 FDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFE 539
+DFE+L ++TKI+T NLNK+IDVN YP+ SN RHRPIGIGIQGLAD F L+ PF
Sbjct: 472 YDFEKLLKITKIVTRNLNKVIDVNFYPVIEAETSNKRHRPIGIGIQGLADLFSLMRFPFG 531
Query: 540 SPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWD 599
SPE+++LN IFET+YY AL+AS ELA K G Y +Y GSP+S+GILQ +MWN+ PS W+
Sbjct: 532 SPESRKLNIQIFETLYYGALEASCELAEKYGTYSSYQGSPISQGILQYEMWNVKPSSLWN 591
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W L+E I+K+GVRNSLL+APMPTAST+QILGNNE EPYT+N+Y RR LSGEF V+N+H
Sbjct: 592 WEILKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTTNLYYRRTLSGEFSVINRH 651
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL DL +L LW+ ++ K+I+ GSV KI IP+ +K +YKT WE+ QK ++DMAADRG
Sbjct: 652 LLNDLIKLNLWNEDMRNKLIFFKGSVQKIKSIPDNIKELYKTNWELSQKIILDMAADRGA 711
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
YIDQSQSLNIH+EQP K++S+HFY W KG+KTGMYYLRTR AAD I+FTVD S ++N
Sbjct: 712 YIDQSQSLNIHIEQPTISKISSVHFYGWKKGLKTGMYYLRTRPAADPIQFTVDKSTVSNN 771
Query: 780 KANRADNDVEANLAQVVCSLKNQEECMACGS 810
A + + + N+ Q+VCSL+N++ C CG+
Sbjct: 772 VAIQTEKNDALNMEQLVCSLENKDACTMCGA 802
>gi|387593978|gb|EIJ89002.1| ribonucleoside-diphosphate reductase large subunit [Nematocida
parisii ERTm3]
Length = 786
Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/809 (57%), Positives = 590/809 (72%), Gaps = 30/809 (3%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
++K+ R E + D + LK ++ GL +A+K+ GV +TT +L LAAE
Sbjct: 7 ILKKGNRVEYSQ-DILLEYLKGMASGLDSTFIKVNELAEKITMGVCDDMTTEELGVLAAE 65
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA MT +HP Y+LLAGR+ S L K T + FSE + + N + K ++++ + +
Sbjct: 66 TAADMTTSHPHYSLLAGRIEASFLQKSTPSKFSEAMMKLSNSIIYGTDLKTEIISEKILD 125
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDD 182
II+KN LD AI +RDF+F YFG KTL+RSYLLK ++ ++ERPQ++ MRVSVGIH++D
Sbjct: 126 IILKNRERLDSAIKDERDFEFSYFGIKTLKRSYLLKSNNVIIERPQYLWMRVSVGIHEND 185
Query: 183 TDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIIS 242
+S ++TY LMS F HATPTLFN+GT PQLSSCFLL M+ DSI+GIY+TLK+CA+IS
Sbjct: 186 IESVIQTYELMSTKHFIHATPTLFNSGTISPQLSSCFLLAMQSDSIDGIYNTLKQCAVIS 245
Query: 243 KSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLE 302
K AGGIG++IHNIR +GSYI GT G SNGI+PML+VF+ T++YVDQGG KR G+ +Y+E
Sbjct: 246 KHAGGIGVNIHNIRGTGSYIKGTFGHSNGIIPMLRVFDATSKYVDQGGNKRPGSIVVYIE 305
Query: 303 PWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADS 362
PWH DIF+FLDLRKN GKEE RAR+LF LWVPDLFM+RV +DG W+LFCP+ A GL +
Sbjct: 306 PWHRDIFDFLDLRKNTGKEEMRARNLFLGLWVPDLFMKRVEEDGDWALFCPNMAKGLHEK 365
Query: 363 WGIEFEHLYSQYEEEGRA-KMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
+G EFE LY QYE+E R K V+ ARKLW IL ++IETG PY+L+KDSCNRKSNQ+NLG
Sbjct: 366 YGDEFEELYVQYEKEERVEKKVVPARKLWKAILEAEIETGVPYILYKDSCNRKSNQKNLG 425
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
IK SNLC EIVE++ P E AVCNLAS+ALP Y+ +N F+
Sbjct: 426 VIKGSNLCAEIVEYTDPNEIAVCNLASLALPTYI--------------------ENNEFN 465
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F +L EV KI+ +NLNKIIDVN YP+E + SN++HRPIG+G+QGLAD +ILLG PFES
Sbjct: 466 FNKLKEVAKIVAKNLNKIIDVNKYPLEQAKNSNMKHRPIGMGVQGLADVYILLGYPFESK 525
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA +LNK IFETIY+ AL+AS ELA K GPYE+Y GSP+SKGILQ DMW + PSDRWDW+
Sbjct: 526 EAAELNKAIFETIYFGALEASNELAQKYGPYESYAGSPVSKGILQYDMWGVQPSDRWDWA 585
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
L++ I+ +GVRNSLLVA MPTASTSQILG NECFE +TSNIYTRR LSGEF +VN HL+
Sbjct: 586 GLKKKIAAHGVRNSLLVALMPTASTSQILGFNECFEGFTSNIYTRRTLSGEFQIVNSHLV 645
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
K+L +LGLW +K II GS+ I IP+ +K +YKTVWEIKQK ++D AADRG Y+
Sbjct: 646 KNLADLGLWGPEMKNIIIEHEGSIQNIPSIPDSIKQLYKTVWEIKQKAVIDQAADRGAYV 705
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
DQSQS+NIH+ P +LTS+HFY W KG+KTG YYLRT+ + AIKFTVD ++
Sbjct: 706 DQSQSMNIHISTPTFAQLTSMHFYGWKKGLKTGTYYLRTKPSQAAIKFTVD------KQQ 759
Query: 782 NRADNDVEANLAQVVCSLKNQEECMACGS 810
+ E+ A CSL +C++CGS
Sbjct: 760 AQEYLQKESAPAPATCSLDG--DCLSCGS 786
>gi|387595820|gb|EIJ93443.1| ribonucleoside-diphosphate reductase large subunit [Nematocida
parisii ERTm1]
Length = 786
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/809 (57%), Positives = 590/809 (72%), Gaps = 30/809 (3%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
++K+ R E + D + LK ++ GL +A+K+ GV +TT +L LAAE
Sbjct: 7 ILKKGNRVEYSQ-DILLEYLKGMASGLDSTFIKVNELAEKITMGVCDDMTTEELGVLAAE 65
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA MT +HP Y+LLAGR+ S L K T + FSE + + N + K ++++ + +
Sbjct: 66 TAADMTTSHPHYSLLAGRIEASFLQKSTPSKFSEAMMKLSNSIIYGTDLKTEIISEKILD 125
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDD 182
II+KN LD AI +RDF+F YFG KTL+RSYLLK ++ ++ERPQ++ MRVSVGIH++D
Sbjct: 126 IILKNRERLDSAIKDERDFEFSYFGIKTLKRSYLLKSNNVIIERPQYLWMRVSVGIHEND 185
Query: 183 TDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIIS 242
+S ++TY LMS F HATPTLFN+GT PQLSSCFLL M+ DSI+GIY+TLK+CA+IS
Sbjct: 186 IESVIQTYELMSTKHFIHATPTLFNSGTISPQLSSCFLLAMQSDSIDGIYNTLKQCAVIS 245
Query: 243 KSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLE 302
K AGGIG++IHNIR +GSYI GT G SNGI+PML+VF+ T++YVDQGG KR G+ +Y+E
Sbjct: 246 KHAGGIGVNIHNIRGTGSYIKGTFGHSNGIIPMLRVFDATSKYVDQGGNKRPGSIVVYIE 305
Query: 303 PWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADS 362
PWH DIF+FLDLRKN GKEE RAR+LF LWVPDLFM+RV +DG W+LFCP+ A GL +
Sbjct: 306 PWHRDIFDFLDLRKNTGKEEMRARNLFLGLWVPDLFMKRVEEDGDWALFCPNMAKGLHEK 365
Query: 363 WGIEFEHLYSQYEEEGRA-KMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
+G EFE LY QYE+E R K V+ ARKLW IL ++IETG PY+L+KDSCNRKSNQ+NLG
Sbjct: 366 YGDEFEELYVQYEKEERVEKKVVPARKLWKAILEAEIETGVPYILYKDSCNRKSNQKNLG 425
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
IK SNLC EIVE++ P E AVCNLAS+ALP Y+ +N F+
Sbjct: 426 VIKGSNLCAEIVEYTDPNEIAVCNLASLALPTYI--------------------ENNEFN 465
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F +L EV KI+ +NLNKIIDVN YP+E + SN++HRPIG+G+QGLAD +ILLG PFES
Sbjct: 466 FNKLKEVAKIVAKNLNKIIDVNKYPLEQAKNSNMKHRPIGMGVQGLADVYILLGYPFESK 525
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA +LNK IFETIY+ AL+AS ELA K GPYE+Y GSP+SKGILQ DMW + PS+RWDW+
Sbjct: 526 EAAELNKAIFETIYFGALEASNELAQKYGPYESYAGSPVSKGILQYDMWGVQPSNRWDWA 585
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
L++ I+ +GVRNSLLVA MPTASTSQILG NECFE +TSNIYTRR LSGEF +VN HL+
Sbjct: 586 GLKKKIAAHGVRNSLLVALMPTASTSQILGFNECFEGFTSNIYTRRTLSGEFQIVNSHLV 645
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
K+L +LGLW +K II GS+ I IP+ +K +YKTVWEIKQK ++D AADRG Y+
Sbjct: 646 KNLADLGLWGPEMKNIIIEHEGSIQNIPSIPDSIKQLYKTVWEIKQKAVIDQAADRGAYV 705
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
DQSQS+NIH+ P +LTS+HFY W KG+KTG YYLRT+ + AIKFTVD ++
Sbjct: 706 DQSQSMNIHISTPTFAQLTSMHFYGWKKGLKTGTYYLRTKPSQAAIKFTVD------KQQ 759
Query: 782 NRADNDVEANLAQVVCSLKNQEECMACGS 810
+ E+ A CSL +C++CGS
Sbjct: 760 AQEYLQKESAPAPATCSLDG--DCLSCGS 786
>gi|410084533|ref|XP_003959843.1| hypothetical protein KAFR_0L01000 [Kazachstania africana CBS 2517]
gi|372466436|emb|CCF60708.1| hypothetical protein KAFR_0L01000 [Kazachstania africana CBS 2517]
Length = 885
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/766 (57%), Positives = 581/766 (75%), Gaps = 15/766 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKEPVRFDKITAR+ +L YGL H D V V Q++ GVY+GVTT++LD LA
Sbjct: 1 MYVIKRDGRKEPVRFDKITARISRLCYGLDPTHVDAVKVTQRIITGVYEGVTTSELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A MT HPDY LA R+A+SNLHK T FS+ ++D++ Y N R+G+ A LV++++
Sbjct: 61 AETCAFMTTLHPDYGQLAARLAISNLHKQTTKQFSKVVEDLHAYVNPRNGRHAPLVSEEL 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ + ++ AI+YDRD+ F YFGFK LERSYLL+++ VVERPQH++MRV++GIH
Sbjct: 121 LQIVKDHKDEINSAIVYDRDYQFTYFGFKALERSYLLRLNGEVVERPQHLIMRVALGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ ++A++TY+LMS +F H + TLFNAGT Q+SS + + MKDDSIEGIYDTLK+CA+
Sbjct: 181 DNIEAAIETYNLMSLKYFIHGSSTLFNAGTVNSQMSSSYTVAMKDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
+SKSAGG+GL + NIR++GSYI GTNG+SNGI+PM++V+N+TAR+VDQGG KR GA A+Y
Sbjct: 241 VSKSAGGMGLHVTNIRSTGSYIAGTNGTSNGIIPMVRVYNNTARFVDQGGNKRPGAVAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+F+D++K GK+E RARDL ALWVPDLFM+RV +DG W+LF PS A GL
Sbjct: 301 IEPWHADIFDFIDVKKTSGKDEIRARDLLPALWVPDLFMQRVHEDGDWTLFSPSAAPGLV 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ LY++YE EGR K I A+KLW+ IL +Q + P M++KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFDALYTRYEREGRGK-TIKAQKLWYCILEAQNDCSAPIMVYKDPCNKKSNQKNL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNL ++V +S +ET N+AS+ALP ++ S D K +
Sbjct: 420 GTIKSSNLSGDVVVYSDAKETPASNMASLALPAFIEI--------------SEDGKTSTY 465
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F++L ++TKI+T NLN IID N YP+ RR+ L+HRPI IG+QGLADTF+ L L F+S
Sbjct: 466 NFKKLHDITKIVTRNLNVIIDRNTYPVPEARRATLKHRPIAIGVQGLADTFMTLRLAFDS 525
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EAQ LN+ IFETIY+ +L+AS ELA KDGPY+++ GSP S+GILQ+D+W+ PS WDW
Sbjct: 526 AEAQLLNQQIFETIYHASLEASVELAKKDGPYQSFNGSPSSRGILQMDLWDAKPSGVWDW 585
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LR+ I + G+RNSL A MPT+STSQILG ECFEP +SN+Y RVLSGEF VVN +L
Sbjct: 586 DALRKDIMEYGLRNSLTTAAMPTSSTSQILGYTECFEPISSNMYQHRVLSGEFQVVNPYL 645
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL +LG+W +K I+ +NGS+ + +P+ELKAIYKT WEI QK ++DMA DR Y
Sbjct: 646 LRDLVDLGIWDETMKQHIVSQNGSIQALPNVPQELKAIYKTAWEISQKKIIDMATDRAIY 705
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADA 766
IDQSQSL++ + GK+TS+HFY W+KG+KTGMY L ++ A A
Sbjct: 706 IDQSQSLSLFLRATTMGKITSMHFYGWNKGLKTGMYKLNSQPVAAA 751
>gi|320038060|gb|EFW19996.1| ribonucleoside-diphosphate reductase large subunit [Coccidioides
posadasii str. Silveira]
Length = 643
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/660 (66%), Positives = 537/660 (81%), Gaps = 18/660 (2%)
Query: 32 EHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITK 91
EH D + QKV +GVY+GVTT +LD LAAETAA MTV HPDYA+LA R+AVSNLHK TK
Sbjct: 2 EHVDAAAITQKVISGVYQGVTTIELDNLAAETAAYMTVTHPDYAILAARIAVSNLHKQTK 61
Query: 92 NSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTL 151
FS I D+Y+Y N ++ + A +++ YEI+MK++A L+ AI+YDRDF++ YFGFKTL
Sbjct: 62 KQFSSVIDDLYHYINPKNNRPAPMISQKTYEIVMKHSAELNSAIVYDRDFNYQYFGFKTL 121
Query: 152 ERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTP 211
ERSYLL+++ +V ERPQHM+MRV+VGIH +D + A++TY+LMSQ +FTHA+PTLFNAGTP
Sbjct: 122 ERSYLLRINGKVAERPQHMIMRVAVGIHGEDIEKAIETYNLMSQKFFTHASPTLFNAGTP 181
Query: 212 QPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNG 271
QPQ++SCFL+ MK+DSIEGIYDTLK CA+ISK+AGGIGL++H IRA+GSYI GTNGSSNG
Sbjct: 182 QPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAGGIGLNVHRIRATGSYIAGTNGSSNG 241
Query: 272 IVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYA 331
I+PML+VFN+TARYVDQGG KR GAFAIYLEPWH+DIFEFLDLRKN GKEE RARDLF A
Sbjct: 242 IIPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHSDIFEFLDLRKNHGKEEVRARDLFLA 301
Query: 332 LWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWF 391
LW PDLFM+RV +G W+LFCP++A GLAD +G EFE LY QYE+EGR + I A+KLW+
Sbjct: 302 LWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGDEFEALYEQYEKEGRGRKTIKAQKLWY 361
Query: 392 EILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIAL 451
IL +Q ETG P+ML+KD+CNRKSNQ+NLGTI+SSNLCTEI+E++SP+E AVCNLAS+AL
Sbjct: 362 AILEAQTETGNPFMLYKDACNRKSNQKNLGTIRSSNLCTEIIEYTSPDEVAVCNLASLAL 421
Query: 452 PRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTR 511
P YV PV+ +DF +L EVT+++ NLNKIID NHYP+ R
Sbjct: 422 PTYVD----PVRGE--------------YDFGKLHEVTQVLVRNLNKIIDGNHYPVPEAR 463
Query: 512 RSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGP 571
+SN RHRPI +G+QGLAD F+ L LPF+SPEA+QLN IFETIY+ AL AS ++A DGP
Sbjct: 464 KSNFRHRPIAVGVQGLADAFLALRLPFDSPEARQLNIQIFETIYHAALTASCDIAKVDGP 523
Query: 572 YETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILG 631
YETY GSP+S+G+LQ DMWN+TP+D WDW SL+ I+K+GVRNSLLVAPMPTASTSQILG
Sbjct: 524 YETYEGSPVSQGVLQYDMWNVTPTDLWDWDSLKRDIAKHGVRNSLLVAPMPTASTSQILG 583
Query: 632 NNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEI 691
NECFEPYTSNIY+RRVL+GEF VVN LLKDL +LGLWS +K +II E GS+ I I
Sbjct: 584 FNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVDLGLWSDNMKNRIIAEGGSIQSIPNI 643
>gi|50549777|ref|XP_502360.1| YALI0D03333p [Yarrowia lipolytica]
gi|49648228|emb|CAG80548.1| YALI0D03333p [Yarrowia lipolytica CLIB122]
Length = 849
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/778 (58%), Positives = 577/778 (74%), Gaps = 18/778 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KR G++EP+ K T RL L + LS +AQK G + GV+T +L+ LA
Sbjct: 1 MHVVKRGGQREPMDMAKFTRRLTALCFNLSSV-VSATEIAQKTVDGAFDGVSTVELNNLA 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
+ETAAA+ HPDY +LA R++VSNLHK T + F ++ +Y+ ++ +G+ A LV +
Sbjct: 60 SETAAALMTRHPDYGVLAARLSVSNLHKQTSDKFVNVMQQLYDNKDE-TGEHAPLVTLAL 118
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
E + L+ AI Y RD + YFGFKTLE+SYLL++ VVERPQHMLMRV++GIH
Sbjct: 119 LERAQNHGETLELAISYYRDMTYSYFGFKTLEKSYLLRVGGNVVERPQHMLMRVALGIHG 178
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +TY +S FTHA+PTLFNAGTPQ QLSSCFL+ M DSI+GIYDTLK CA
Sbjct: 179 DDIFKVRETYQALSLRKFTHASPTLFNAGTPQGQLSSCFLVAMAADSIDGIYDTLKTCAQ 238
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIRA G+ I G+ G S+GIVPML+VFN+TARYVDQGG KR GAFA+Y
Sbjct: 239 ISKTAGGIGLHIHNIRAKGALITGSQGRSSGIVPMLRVFNNTARYVDQGGNKRPGAFAVY 298
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI +FL+LRKN G EE RARDLFYALWVPDLFM +V + KWSLFCP A GLA
Sbjct: 299 LEPWHADILDFLNLRKNHGAEENRARDLFYALWVPDLFMRKVENGEKWSLFCPRKAPGLA 358
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG EF+ Y YE +G I A++L+ IL SQIETG P+ML+KDSCN KSNQ+NL
Sbjct: 359 DVWGEEFDRKYEDYESKGLYNSQIDAQELFKAILTSQIETGGPFMLYKDSCNAKSNQKNL 418
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIV++SSP+E AVCNLAS+ALP +V+ KG GS +
Sbjct: 419 GTIKSSNLCTEIVQYSSPDEVAVCNLASVALPEFVQLKGSS---------GS-------Y 462
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F L E K +T NLN II+ N YP++ SN RHRPI +G+QGLAD F+ L +PF+S
Sbjct: 463 NFGELHETVKHMTRNLNCIIEANCYPVKEAETSNKRHRPIAVGVQGLADVFMKLRMPFDS 522
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEA +LN IFETIY+ A +AS ELA + GPYETY GSP S+G LQ D+WN TPSD WDW
Sbjct: 523 PEAAELNVLIFETIYHAACEASIELAAELGPYETYEGSPASQGKLQFDLWNKTPSDLWDW 582
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+ ++K+G+RNSLLVAPMPTASTSQILG+NECFEPYTSNIY RRV +GEF+VVN+ L
Sbjct: 583 ARLKTKLAKHGMRNSLLVAPMPTASTSQILGHNECFEPYTSNIYLRRVQAGEFLVVNQWL 642
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+KDL +LG+W+ +K +II++NGS+ I++IPE ++A+Y+T WEIK + ++DMAA R Y
Sbjct: 643 MKDLIKLGMWTEEMKNRIIHDNGSIQSITQIPEHIRAVYRTAWEIKARNIIDMAAARAPY 702
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN 778
IDQSQSLNI M + HGK+T++HF+ W G+KTGMYYLRT AA AI+FTVD ++L N
Sbjct: 703 IDQSQSLNIFMPEITHGKITAMHFHGWKAGLKTGMYYLRTPPAAHAIQFTVDKTLLQN 760
>gi|343173119|gb|AEL99262.1| ribonucleoside-diphosphate reductase subunit M1, partial [Silene
latifolia]
Length = 542
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/541 (80%), Positives = 493/541 (91%)
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+CA+ISKSAGGIG+S+HNIRA+GSYI GTNG SNGI PML+VFNDTARYVDQGGGKRKG
Sbjct: 1 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGLSNGITPMLRVFNDTARYVDQGGGKRKG 60
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
AFA+YLEPWHADIF+FLDLRKN GKEE RARDLFYALWVPDLFMERV+ DG+WSLFCP++
Sbjct: 61 AFAVYLEPWHADIFDFLDLRKNHGKEEQRARDLFYALWVPDLFMERVQTDGQWSLFCPNE 120
Query: 356 ASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKS 415
A GLAD WG EFE LY++YE G+AK V+ A+ LWFEIL +Q+ETGTPYMLFKDSCNRKS
Sbjct: 121 APGLADCWGKEFETLYTKYERLGKAKKVVQAQSLWFEILKAQMETGTPYMLFKDSCNRKS 180
Query: 416 NQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDS 475
NQQNLGTIKSSNLCTEI++++SP ETAVCNLASIALPRYV+EKGVP +S +KL GS DS
Sbjct: 181 NQQNLGTIKSSNLCTEIIQYTSPTETAVCNLASIALPRYVKEKGVPSESQNTKLAGSLDS 240
Query: 476 KNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLG 535
NR FDF++LAEV +++T NLNKIIDVN YP+ET RRSN+RHRPIGIGIQGLADTFILLG
Sbjct: 241 GNRYFDFDKLAEVVEVVTTNLNKIIDVNFYPVETARRSNMRHRPIGIGIQGLADTFILLG 300
Query: 536 LPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS 595
+PF+SPEAQQLNKDIFETIYYHALK S +LA K+GPYETY GSP+SKGILQ DMW +TPS
Sbjct: 301 MPFDSPEAQQLNKDIFETIYYHALKTSCKLAAKEGPYETYEGSPVSKGILQPDMWGVTPS 360
Query: 596 DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
DRWDW +LR MI++ G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+V
Sbjct: 361 DRWDWGALRGMIAEKGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 420
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VNKHLL DLTE+GLWS LK +IIYE+GSV KI EIP LKAIYKTVWEIKQKTLVDMA
Sbjct: 421 VNKHLLHDLTEMGLWSPTLKNQIIYEDGSVQKIIEIPAHLKAIYKTVWEIKQKTLVDMAV 480
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
DRGC+IDQSQSLNIHM+Q + GKLTSLHF+AWSKG+KTGMYYLRTRAAADAIKFTVDT++
Sbjct: 481 DRGCFIDQSQSLNIHMDQANTGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTL 540
Query: 776 L 776
L
Sbjct: 541 L 541
>gi|343173121|gb|AEL99263.1| ribonucleoside-diphosphate reductase subunit M1, partial [Silene
latifolia]
Length = 542
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/541 (81%), Positives = 492/541 (90%)
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+CA+ISKSAGGIG+S+HNIRA+GSYI GTNG SNGI PML+VFNDTARYVDQGGGKRKG
Sbjct: 1 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGLSNGITPMLRVFNDTARYVDQGGGKRKG 60
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
AFA+YLEPWHADIF+FLDLRKN GKEE RARDLFYALWVPDLFMERV+ DG+WSLFCP++
Sbjct: 61 AFAVYLEPWHADIFDFLDLRKNHGKEEQRARDLFYALWVPDLFMERVQTDGQWSLFCPNE 120
Query: 356 ASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKS 415
A GLAD WG EFE LY++YE G+AK V+ A+ LWFEIL +Q+ETGTPYMLFKDSCNRKS
Sbjct: 121 APGLADCWGKEFETLYTKYERLGKAKKVVQAQSLWFEILKAQMETGTPYMLFKDSCNRKS 180
Query: 416 NQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDS 475
NQQNLGTIKSSNLCTEI++++SP ETAVCNLASIALPRYV+EKGVP +S +KL GS DS
Sbjct: 181 NQQNLGTIKSSNLCTEIIQYTSPTETAVCNLASIALPRYVKEKGVPSESQNTKLAGSLDS 240
Query: 476 KNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLG 535
NR FDF++LAEV +++T NLNKIIDVN YP+ET RRSN+RHRPIGIGIQGLADTFILLG
Sbjct: 241 GNRYFDFDKLAEVVEVVTTNLNKIIDVNFYPVETARRSNMRHRPIGIGIQGLADTFILLG 300
Query: 536 LPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS 595
+PF+SPEAQQLNKDIFETIYYHALK S +LA K+GPYETY GSP+SKGILQ DMW +T S
Sbjct: 301 MPFDSPEAQQLNKDIFETIYYHALKTSCKLAAKEGPYETYEGSPVSKGILQPDMWGVTLS 360
Query: 596 DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
DRWDW +LR MI++ G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+V
Sbjct: 361 DRWDWGALRGMIAEKGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 420
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VNKHLL DLTE+GLWS LK +IIYENGSV KI EIP LKAIYKTVWEIKQKTLVDMA
Sbjct: 421 VNKHLLHDLTEMGLWSPTLKNQIIYENGSVQKIIEIPAHLKAIYKTVWEIKQKTLVDMAV 480
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
DRGC+IDQSQSLNIHM+Q + GKLTSLHF+AWSKG+KTGMYYLRTRAAADAIKFTVDTS+
Sbjct: 481 DRGCFIDQSQSLNIHMDQANTGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTSL 540
Query: 776 L 776
L
Sbjct: 541 L 541
>gi|150864273|ref|XP_001383025.2| ribonucleoside-diphosphate reductase alpha subunit [Scheffersomyces
stipitis CBS 6054]
gi|149385529|gb|ABN64996.2| ribonucleoside-diphosphate reductase alpha subunit [Scheffersomyces
stipitis CBS 6054]
Length = 891
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/780 (57%), Positives = 584/780 (74%), Gaps = 20/780 (2%)
Query: 9 RKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMT 68
++E +++ L KL+ L +H D + V G+ VT +L L +ET A+ T
Sbjct: 34 KREDFDIKRLSRFLLKLTTNLDVKHLDLDSIVSTVEVGLPAKVTLDELYGLVSETLASRT 93
Query: 69 VNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYY-----NKRSGKKAS----LVADD 119
+ HPDYALLAGRVA + K SFS + ++N+ N+ +G K S +V++
Sbjct: 94 IYHPDYALLAGRVAARRIQKHVSTSFSGAVIKLWNHRSSVTNNRSNGNKTSRTYSIVSES 153
Query: 120 VYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIH 179
+Y+I+M++ D I DRDFD YF KTLERSYLLK++ + E PQ+M +RV++GIH
Sbjct: 154 LYKIVMQHRHFFDSLIEKDRDFDLTYFAIKTLERSYLLKINDEMAETPQYMFLRVAIGIH 213
Query: 180 KDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCA 239
++ D ++TY LMS +F HA+PTLFNAG+ LSSCFL+ M+DDSI+GIY TL K A
Sbjct: 214 GNNLDDVVETYELMSSRYFIHASPTLFNAGSEYNYLSSCFLVDMEDDSIDGIYKTLHKTA 273
Query: 240 IISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAI 299
+ISK++GGIGL++HNIRASGS I TNG+S+G+VPML+VFNDTARYVDQGG KR GAFAI
Sbjct: 274 LISKASGGIGLNVHNIRASGSLIASTNGTSSGLVPMLRVFNDTARYVDQGGNKRPGAFAI 333
Query: 300 YLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGL 359
Y+EPWHADIF LD++KN GKEE RARDLF+ALW+PDLFM++V+DD W LF P +A GL
Sbjct: 334 YIEPWHADIFSVLDMKKNHGKEELRARDLFFALWIPDLFMQKVKDDEDWCLFSPDEAPGL 393
Query: 360 ADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQN 419
AD +G EF LY+QYE EGRA+ V+ A KLW IL SQ ETG PYML+KDSCNRKSNQ+N
Sbjct: 394 ADCYGDEFVDLYNQYEAEGRARTVVKAHKLWLAILESQTETGGPYMLYKDSCNRKSNQKN 453
Query: 420 LGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRL 479
LGTIKSSNLC EIVE+ S EETAVCNL S+ALP +++ S + + D +
Sbjct: 454 LGTIKSSNLCCEIVEYCSSEETAVCNLGSLALPAFIK----------SVSIDNSDEEVLE 503
Query: 480 FDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFE 539
FDFE+L +TK++T NLNK+IDV YP+E+T+ SN++HRPI +G+QGLAD F+ L LPF
Sbjct: 504 FDFEKLHSITKVLTRNLNKVIDVTLYPVESTKVSNMKHRPIALGVQGLADVFLELRLPFS 563
Query: 540 SPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW- 598
S EA++LN IFETIY+ A++AS ELA+ +GPY ++ GSP SKGILQ D+W+ PS+ +
Sbjct: 564 SDEAKKLNIQIFETIYHAAVEASVELAMSEGPYNSFEGSPASKGILQFDLWDHKPSELYN 623
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
DW SL+E + +G+RNSLLVAPMPTASTSQILG NECFEPYTSN+YTRRVL+GE+ V NK
Sbjct: 624 DWDSLKESVKTHGLRNSLLVAPMPTASTSQILGYNECFEPYTSNLYTRRVLAGEYQVANK 683
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
+L+KDL +LGLW+ A++ KII +NGS+ IS IP+ELK +YKTVWEI QK ++DMAADRG
Sbjct: 684 YLVKDLIDLGLWNSAVRNKIIVDNGSIQNISSIPQELKELYKTVWEISQKVIIDMAADRG 743
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN 778
+IDQSQS+NIH++ P GKLTS HFY W KG+KTGMYYLRT+AA+ AI+FTV+ + N
Sbjct: 744 KFIDQSQSMNIHLQNPTFGKLTSCHFYGWQKGLKTGMYYLRTQAASRAIQFTVNNEEIEN 803
>gi|406604711|emb|CCH43846.1| ribonucleoside-diphosphate reductase subunit M1 [Wickerhamomyces
ciferrii]
Length = 833
Score = 946 bits (2445), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/773 (57%), Positives = 582/773 (75%), Gaps = 16/773 (2%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+ K DG K+ + +K+ LK LS GL H + + KV G+ VTT QL +LA+E
Sbjct: 6 IQKSDGSKQRFQLEKLINTLKNLSKGLDTNHINFEELGNKVFNGLPDEVTTDQLIDLASE 65
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
T A +T HPD+A+LA R++V+ L K + FSE + ++N+YNK++ + L+++ VY+
Sbjct: 66 TLATLTTLHPDHAILASRLSVTRLSKNIPSKFSECTEKLWNFYNKKTKSHSPLISEKVYK 125
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDD 182
I+ +N LD I +RD F +FG +TL++SYLLK++ E PQ M +RVS+GIH DD
Sbjct: 126 IVQENKDLLDSVIDSERDLSFTFFGLETLKKSYLLKINGIWAETPQFMYLRVSLGIHGDD 185
Query: 183 TDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIIS 242
DSA++TY+LMSQ +F HA+PTLFN+GTP LSSCFLL + +DSI+GIY TL +CA+IS
Sbjct: 186 LDSAIETYNLMSQKYFIHASPTLFNSGTPNAYLSSCFLLGIDEDSIDGIYGTLHRCALIS 245
Query: 243 KSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLE 302
K+AGGIG+ + NIR+SGSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFA+Y+E
Sbjct: 246 KAAGGIGIHVSNIRSSGSYIAGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVYVE 305
Query: 303 PWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADS 362
PWH+DIFEFLDLRKN GKEE RARDLFYALW+PDLFM+ V++D W LF P++A GL D
Sbjct: 306 PWHSDIFEFLDLRKNHGKEEMRARDLFYALWIPDLFMKAVKEDDDWHLFSPNEAKGLTDV 365
Query: 363 WGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGT 422
+G +FE LY QY +EG A + A+KLW+ IL SQ ETG P+ML+KD+CN KSNQ+NLGT
Sbjct: 366 YGEDFEKLYEQYVKEGLATRTVKAQKLWYAILESQTETGGPFMLYKDACNIKSNQKNLGT 425
Query: 423 IKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDF 482
IKSSNLC E+VE+SS +E AVCNLAS+ALP YV S + F+F
Sbjct: 426 IKSSNLCCEVVEYSSKDEVAVCNLASVALPSYV----------------SYEDNIMWFNF 469
Query: 483 ERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPE 542
+L +V K++T NLNK+IDV YPI SNL+HRPI +G+QGLAD F+ L LPFES E
Sbjct: 470 NKLHDVVKVVTRNLNKVIDVGKYPIPEAENSNLKHRPIAVGVQGLADLFMELRLPFESSE 529
Query: 543 AQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSS 602
A+ LN IFETIY+ +++AS ELA KDG Y+++ GSP S+G LQ D+WN P+D +DW +
Sbjct: 530 AKLLNIQIFETIYHASVEASIELAQKDGAYKSFIGSPASQGQLQFDLWNHKPTDLYDWDA 589
Query: 603 LREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLK 662
L+ + +G+RNSLLVAPMPTASTSQILG ECFEP TSN+Y+RRVLSGEF +VNK+L+K
Sbjct: 590 LKAKVRAHGLRNSLLVAPMPTASTSQILGFTECFEPLTSNVYSRRVLSGEFQIVNKYLIK 649
Query: 663 DLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYID 722
DL +LG+W LK +I+ NGS+ I IP+E+K +YKTVWEI QK ++++AADR +ID
Sbjct: 650 DLIDLGIWDLNLKNQIVDSNGSIQDIKTIPQEIKELYKTVWEISQKNIINLAADRAPFID 709
Query: 723 QSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
QSQS+NIH+++P KLTS+HFY WSKG+KTGMYYLRT+AA++AIKFT+D S+
Sbjct: 710 QSQSMNIHIKEPTMRKLTSMHFYGWSKGLKTGMYYLRTQAASEAIKFTIDRSL 762
>gi|378756094|gb|EHY66119.1| ribonucleoside-diphosphate reductase [Nematocida sp. 1 ERTm2]
Length = 785
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/809 (57%), Positives = 586/809 (72%), Gaps = 31/809 (3%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
++KR G++ + + LKK++ GL +A+K+ GV G+TT +L L AE
Sbjct: 7 ILKR-GKEVEYNQEILLEHLKKMAVGLDSTFIKVTELAEKITMGVCDGMTTEELGTLTAE 65
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA MT +HP Y+LLAGR+ S L K T ++FS+ + + + K +++ D+ E
Sbjct: 66 TAATMTTSHPHYSLLAGRIEASLLQKSTPSTFSDAMCMLATTSINGTDLKTEIISPDIIE 125
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDD 182
I+MKN LD AI DRDF+F YFG KTL RSYLLK+++ +VERPQ+M MRVSVGIH+DD
Sbjct: 126 IVMKNKERLDAAIQNDRDFEFSYFGIKTLTRSYLLKVNNVIVERPQYMWMRVSVGIHRDD 185
Query: 183 TDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIIS 242
D+ ++TY LMS F HATPTLFN+GT PQLSSCFLL M+ DSI+GIY+TLK+CA+IS
Sbjct: 186 IDAVIETYELMSTKHFIHATPTLFNSGTISPQLSSCFLLAMQSDSIDGIYNTLKQCAVIS 245
Query: 243 KSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLE 302
K AGGIG++IHNIR +GSYI GT G SNGI+PML+VF+ T++YVDQGG KR G+ +Y+E
Sbjct: 246 KHAGGIGVNIHNIRGTGSYIKGTFGHSNGIIPMLRVFDATSKYVDQGGNKRPGSIVVYIE 305
Query: 303 PWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADS 362
PWH DIF+FLDL+KN GKEE RAR+LF LW+PDLFM RV +DG W LFCP+ A GL +
Sbjct: 306 PWHRDIFDFLDLKKNTGKEEMRARNLFLGLWIPDLFMRRVEEDGDWCLFCPNLAKGLHEK 365
Query: 363 WGIEFEHLYSQYEEEGR-AKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
+G EFE LY+ YE+ K VISARKLW IL ++IETG PY+L+KDSCNRKSNQ+NLG
Sbjct: 366 YGSEFEELYTTYEKTPEIEKKVISARKLWKAILEAEIETGVPYILYKDSCNRKSNQKNLG 425
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
IK SNLC EIVE++ P E AVCNLAS+ALP Y+ +N+ F+
Sbjct: 426 VIKGSNLCAEIVEYTDPSEIAVCNLASLALPTYI--------------------ENKQFN 465
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F +L EV KI+ +NLNKIIDVN YP+E + SNL++RPIGIG+QGLAD +ILLG PFES
Sbjct: 466 FNKLKEVAKIVAKNLNKIIDVNKYPLEEAKYSNLKNRPIGIGVQGLADVYILLGYPFESK 525
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA +LNK IFETIYY AL+AS ELA GPY++Y GSP+S+GILQ DMW++ PSDRWDW+
Sbjct: 526 EAAELNKAIFETIYYGALEASCELAEIHGPYKSYAGSPVSQGILQYDMWDVQPSDRWDWA 585
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
L++ I+ +GVRNSLLVA MPTASTSQILG NECFE +TSNIYTRR LSGEF +VN HL+
Sbjct: 586 GLKKRIAAHGVRNSLLVALMPTASTSQILGFNECFEGFTSNIYTRRTLSGEFQIVNMHLV 645
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
KDL +LGLW +K II GS+ I IP+ +K +YKTVWEIKQK ++D AADRG Y+
Sbjct: 646 KDLADLGLWGPEMKNIIIEHEGSIQNIPSIPDNIKLLYKTVWEIKQKAVIDQAADRGAYV 705
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
DQSQS+NIH+ P +LTS+HFY W KG+KTG YYLRT+ AIKFTVD K
Sbjct: 706 DQSQSMNIHISAPTFAQLTSMHFYGWKKGLKTGTYYLRTKPTQAAIKFTVD-------KQ 758
Query: 782 NRADNDVEANLAQVVCSLKNQEECMACGS 810
+ + + CSL +C++CGS
Sbjct: 759 QAKEYLQKESSPPATCSLDG--DCLSCGS 785
>gi|296217190|ref|XP_002754897.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 3 [Callithrix jacchus]
Length = 711
Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/664 (65%), Positives = 538/664 (81%), Gaps = 20/664 (3%)
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFN 207
KTLERSYLLK++ +V ERPQHMLMRVSVGIHK+D D+A++TY+L+S+ WFTHA+PTLFN
Sbjct: 67 LKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFN 126
Query: 208 AGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNG 267
AGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+ISKSAGGIG+++ IRA+GSYI GTNG
Sbjct: 127 AGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNG 186
Query: 268 SSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARD 327
+SNG+VPML+V+N+TARYVDQGG KR GAFAIYLEPWH DIFEFLDL+KN GKEE RARD
Sbjct: 187 NSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARD 246
Query: 328 LFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISAR 387
LF+ALW+PDLFM+RV + WSL CP++ GL + WG EFE LY YE++ R + V+ A+
Sbjct: 247 LFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYESYEKQRRVRKVVKAQ 306
Query: 388 KLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLA 447
+LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNLGTIK SNLCTEIVE++S +E AVCNLA
Sbjct: 307 QLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLA 366
Query: 448 SIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPI 507
S+AL YV + +DF++LAEVTK+I NLNKIID+N+YP+
Sbjct: 367 SLALNMYV-------------------TSEHTYDFQKLAEVTKVIVRNLNKIIDINYYPV 407
Query: 508 ETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAV 567
SN RHRPIGIG+QGLAD FIL+ PFES EAQ LNK IFETIYY AL+AS +LA
Sbjct: 408 PEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAK 467
Query: 568 KDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTS 627
+ GPYETY GSP+S+GILQ DMWN+TP+D WDW L+E I+K G+RNSLL+APMPTAST+
Sbjct: 468 EHGPYETYEGSPVSRGILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTA 527
Query: 628 QILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSK 687
QILGNNE EPYTSNIYTRRVLSGEF +VN HLLKDLTE GLW +K +II NGS+
Sbjct: 528 QILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQS 587
Query: 688 ISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAW 747
I EIP++LK +YKTVWEI QKT++ MAA+RG +IDQSQSLNIH+ +P++GKLTS+HFY W
Sbjct: 588 IPEIPDDLKQLYKTVWEISQKTVLRMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGW 647
Query: 748 SKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEA-NLAQVVCSLKNQEECM 806
+G+KTGMYYLRTR AA+ I+FT++ L +++ + + + N A ++CSL+N++EC+
Sbjct: 648 KQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMMCSLENRDECL 707
Query: 807 ACGS 810
CGS
Sbjct: 708 MCGS 711
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYAL-LAGRVAVSNLHKITKNS 93
AETAA + Y L + G+VA H + + S
Sbjct: 61 AETAATLKTLERSYLLKINGKVAERPQHMLMRVS 94
>gi|197322445|ref|YP_002154718.1| putative ribonucleotide reductase large subunit [Feldmannia species
virus]
gi|197130512|gb|ACH46848.1| putative ribonucleotide reductase large subunit [Feldmannia species
virus]
Length = 773
Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/781 (56%), Positives = 576/781 (73%), Gaps = 17/781 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKR R+E V FDKIT R++KL GL + DPV V +V G+Y GVTT +LD LA
Sbjct: 1 MYVIKRSQRRENVMFDKITTRVRKLCEGLDSDFVDPVEVTMRVNQGIYAGVTTVELDLLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A M+ NHPDY++LA R+ +SNL+K T++ + ++ M Y N + + A LV++++
Sbjct: 61 AETCAFMSTNHPDYSILAARICLSNLYKETESCYKTLVQKMREYVNPETSQHAPLVSEEL 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++ N+ + A+ + ++DYF FKTLE+SYLLKMD RV ERP +LMRV++GIH
Sbjct: 121 ASVVANNSKVIQEALDEVLE-NYDYFAFKTLEKSYLLKMDGRVSERPHQLLMRVAIGIHG 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D + L+ + M +T ATPTLFNAGTP PQ+SSCFL+ K DSI GI+D+LK CA
Sbjct: 180 HDMPNVLRAFRDMRDKRYTMATPTLFNAGTPVPQMSSCFLMTNKADSISGIFDSLKDCAT 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+S+H++RA GSYI GTNG+SNG+VPML+VFN+ ARYVDQGGG+RKG+FA+Y
Sbjct: 240 ISKYAGGIGISVHDVRARGSYIRGTNGTSNGLVPMLRVFNNAARYVDQGGGRRKGSFAVY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHAD+ F+DLRKN G + RARDLFYALWVPDLFM+RV + WSLFCP++ GL+
Sbjct: 300 LEPWHADVQAFIDLRKNHGNDLERARDLFYALWVPDLFMKRVEKNSAWSLFCPNECPGLS 359
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D G FE LY++YE +G+A+ V+ ARKLW +I++ Q+ETGTPY+LFKDS N KSNQQ+L
Sbjct: 360 DVCGSRFEDLYARYESQGKARKVMDARKLWDQIVDVQVETGTPYILFKDSVNAKSNQQHL 419
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLCTEIVE++SP+E AVCNL SI L +VR+ S F
Sbjct: 420 GVIKSSNLCTEIVEYTSPDEIAVCNLGSINLSTFVRDAYTSTAS---------------F 464
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D E L + NLN++ID N YP+ SNL+HRPIGIG+QG AD +++ LP++S
Sbjct: 465 DLEELVNFAGRMVLNLNRVIDKNFYPVPEAENSNLKHRPIGIGVQGFADALVMMRLPYDS 524
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKD-GPYETYFGSPMSKGILQVDMWNITPSDRWD 599
+A LN +IFE+IYY A+K S LA D GP+E++ GSP+ +GI Q D+W + PS +D
Sbjct: 525 VDAAGLNLNIFESIYYGAMKQSVHLARSDGGPHESFRGSPLEQGIFQFDLWGVKPSGLYD 584
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W +LR + K+GV+N+LLVAPMPTAST+QILGNNE FEP+TSN+Y RRVL+GEF V+NKH
Sbjct: 585 WEALRADVIKHGVKNALLVAPMPTASTAQILGNNESFEPFTSNVYNRRVLAGEFPVINKH 644
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LL+DLT LG+W +K +++ NGSV I +IPE++KA+YKTVWEI Q+ ++D AA RG
Sbjct: 645 LLRDLTSLGVWGDKVKNQLLRANGSVQNIPQIPEDIKALYKTVWEIPQRVILDHAAARGP 704
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
+I QSQS+NIHM +P GK+TS+ FY W KG+KTGMYYLRTR AD+I+F ++ SV N+E
Sbjct: 705 FICQSQSMNIHMAEPSRGKITSMLFYGWRKGLKTGMYYLRTRPKADSIQFALEKSVKNHE 764
Query: 780 K 780
+
Sbjct: 765 E 765
>gi|402894484|ref|XP_003910386.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 2 [Papio anubis]
Length = 711
Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/726 (61%), Positives = 558/726 (76%), Gaps = 41/726 (5%)
Query: 107 KRSGKKASLVADDVYEIIMK-----NAACLDGAIIYDRDFDFDYFGFKTLE--------- 152
KR G++ ++ D + I K N +D A I + Y G T+E
Sbjct: 5 KRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLAAETA 64
Query: 153 -------RSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTL 205
RSYLLK++ +V ERPQHMLMRVSVGIHK+D D+A++TY+L+S+ WFTHA+PTL
Sbjct: 65 ATLTTXXRSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTL 124
Query: 206 FNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGT 265
FNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+ISKSAGGIG+++ IRA+GSYI GT
Sbjct: 125 FNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGT 184
Query: 266 NGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRA 325
NG+SNG+VPML+V+N+TARYVDQGG KR GAFAIYLEPWH DIFEFLDL+KN GKEE RA
Sbjct: 185 NGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRA 244
Query: 326 RDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVIS 385
RDLF+ALW+PDLFM+RV + WSL CP++ GL + WG EFE LY YE++GR + V+
Sbjct: 245 RDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYESYEKQGRVRKVVK 304
Query: 386 ARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCN 445
A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNLGTIK SNLCTEIVE++S +E AVCN
Sbjct: 305 AQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCN 364
Query: 446 LASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHY 505
LAS+AL YV + +DF++LAEVTK++ NLNKIID+N+Y
Sbjct: 365 LASLALNMYV-------------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYY 405
Query: 506 PIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAEL 565
P+ SN RHRPIGIG+QGLAD FIL+ PFES EAQ LNK IFETIYY AL+AS +L
Sbjct: 406 PVPEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDL 465
Query: 566 AVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTAS 625
A + GPYETY GSP+SKGILQ DMWN+TP+D WDW+ L+E I+K G+RNSLL+APMPTAS
Sbjct: 466 AKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDWNLLKENIAKYGIRNSLLIAPMPTAS 525
Query: 626 TSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSV 685
T+QILGNNE EPYTSNIYTRRVLSGEF +VN HLLKDLTE GLW +K +II NGS+
Sbjct: 526 TAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSI 585
Query: 686 SKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFY 745
I EIP++LK +YKTVWEI QKT++ MAA+RG +IDQSQSLNIH+ +P++GKLTS+HFY
Sbjct: 586 QSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFY 645
Query: 746 AWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEA-NLAQVVCSLKNQEE 804
W +G+KTGMYYLRTR AA+ I+FT++ L +++ + + + N A +VCSL+N++E
Sbjct: 646 GWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDE 705
Query: 805 CMACGS 810
C+ CGS
Sbjct: 706 CLMCGS 711
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYAL-LAGRVAVSNLHKITKNS 93
AETAA +T Y L + G+VA H + + S
Sbjct: 61 AETAATLTTXXRSYLLKINGKVAERPQHMLMRVS 94
>gi|18640128|ref|NP_570202.1| SPV042 ribonucleotide reductase large chain [Swinepox virus]
gi|18448535|gb|AAL69781.1| SPV042 ribonucleotide reductase large chain [Swinepox virus]
Length = 757
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/774 (56%), Positives = 571/774 (73%), Gaps = 21/774 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKR G+KE + +KIT R+ L Y L K D +A ++ G+Y + T +D A
Sbjct: 1 MYVIKRSGKKELLSIEKITKRIDNLCYDLDKNFIDANYLANEIIKGLYNNIRTKDIDTFA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
+E A H DY LA R+ VS LHK T SFS+ I +YNY N +G +V++ +
Sbjct: 61 SELIAGFITRHYDYDTLASRIVVSKLHKETTESFSDVIHTLYNYINPNNGNHLPMVSEYL 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ + K+ +D I YDRD+ + YFG KTLE+SYLLK +++++ERPQHMLMRVS+GIH
Sbjct: 121 YQQVNKHRDIIDNVIAYDRDYSYSYFGIKTLEKSYLLKQNNKIIERPQHMLMRVSLGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D ++TY+ +S+ WF HA+PTLFNAGTP PQ+SSCF+L +KDDSIEGI+DTLK+CA+
Sbjct: 181 GDIDDVIETYNYLSEKWFIHASPTLFNAGTPLPQMSSCFILPIKDDSIEGIFDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRA G+YI G NG SNGIVPML+++N+T RY++QGG KR GA +IY
Sbjct: 241 ISKHAGGIGLSISNIRAKGTYISGINGKSNGIVPMLRIYNNTVRYINQGGDKRPGAMSIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FL LRKN G EE R +DLF ALWVPDLFMERV D +WSL CP + GL
Sbjct: 301 IEPWHADIFDFLSLRKNVGNEEYRTKDLFTALWVPDLFMERVEKDEEWSLMCPCECPGLC 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D WG +F LY +YE + + K ++ AR LW I+ +QIE GTPY+L+KDSCN+KSNQ NL
Sbjct: 361 DVWGNDFNKLYIEYETKKKIKAIVKARSLWKSIIEAQIEQGTPYILYKDSCNKKSNQSNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLCTEI++FS+ +E AVCNL SI+L ++V N +F
Sbjct: 421 GTIRSSNLCTEIIQFSNEDEVAVCNLGSISLSKFV--------------------NNNVF 460
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
F++L +TKI+ +NLNKIID+N+YP+ + RSN +HRPIGIG+QGLAD FILLG F+S
Sbjct: 461 MFDKLRIITKILVKNLNKIIDINYYPVIESSRSNKKHRPIGIGVQGLADVFILLGYAFDS 520
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN IFETIYY AL++S ELA GPYETY SP SKGILQ DMW P+D WDW
Sbjct: 521 EEAKILNIQIFETIYYAALESSCELAKIYGPYETYNDSPASKGILQYDMWLKNPTDLWDW 580
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L++ I+ +G+RNSLL+APMPTASTSQIL NNE EPYTSNIYTRRVLSG+F VVN HL
Sbjct: 581 NELKKRINTHGLRNSLLIAPMPTASTSQILSNNESIEPYTSNIYTRRVLSGDFQVVNPHL 640
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L++L +W++ +K I+ NGS+ + ++P+ +K IYKTVWEI QK +++MAADRG +
Sbjct: 641 LRELISRNMWNNDIKNTIVLHNGSIQHL-DLPDNIKQIYKTVWEISQKCILEMAADRGAF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
IDQSQS+ I+++ P + KLTS+HFY W G+KTGMYY+RT++A++ IKFTV+ S
Sbjct: 700 IDQSQSMTIYIDNPTYAKLTSMHFYGWRLGLKTGMYYMRTKSASNPIKFTVECS 753
>gi|312066374|ref|XP_003136240.1| ribonucleoside-diphosphate reductase large subunit [Loa loa]
Length = 1038
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/825 (55%), Positives = 571/825 (69%), Gaps = 94/825 (11%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV+KRDGR E V FDKI R+ KL YGLS++ D + ++QKV AG+YKGVTT +LD LAA
Sbjct: 12 YVVKRDGRHEAVSFDKIARRIMKLCYGLSQDRVDHIEISQKVIAGLYKGVTTVELDNLAA 71
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
E AA M HPDYA LA R+AVSNLHK T+ FS+ K +YN + +SG+ L++ +++
Sbjct: 72 EIAADMITKHPDYATLASRIAVSNLHKKTEKLFSKVSKRLYNATHPKSGRHMPLISKNIF 131
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
+II NA LD AII++RDF + YFG KTLERSYLL+++ + ERPQHMLMRV++GIH D
Sbjct: 132 DIIQNNADILDSAIIHERDFCYTYFGLKTLERSYLLQINGELAERPQHMLMRVALGIHGD 191
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
+ ++AL+TY+LMS+ WFTHATPTLFN+GT PQ+SSCFLL M DDSIEGI++TLKKCA+I
Sbjct: 192 NIEAALETYNLMSERWFTHATPTLFNSGTCTPQMSSCFLLTMFDDSIEGIFETLKKCALI 251
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SKSAGGIGL++H IRA+GS I GTNG SNG+VPML+VFN+ AR
Sbjct: 252 SKSAGGIGLNVHCIRATGSAIAGTNGVSNGLVPMLRVFNNAAR----------------- 294
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
KN G E R RDLF+ LWVPDLFMERVRDD WSL CP++ GL D
Sbjct: 295 --------------KNVGDELERCRDLFFGLWVPDLFMERVRDDKVWSLMCPAECPGLED 340
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
SWG FE LY QYEEEGR + + ARKLW I+++QIETG PYM++KD+CNRK+NQQNLG
Sbjct: 341 SWGEAFEKLYMQYEEEGRYRKQVPARKLWETIVSTQIETGMPYMVYKDTCNRKTNQQNLG 400
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIK SNLCTE+V +SS EE AVCNLASIAL R+V S FD
Sbjct: 401 TIKCSNLCTEVVLYSSREEIAVCNLASIALSRFV-------------------SSEMTFD 441
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F+ L E+TK++ NLNK+ID N+YP+ RSN RHRPIGIG+QGLAD FIL+ PF S
Sbjct: 442 FKMLREITKVVVRNLNKVIDRNYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFTSE 501
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
+A+ LNK IFET+YY AL+AS ELA++ GPYE+Y SP ILQ DMW +TP+++WDW
Sbjct: 502 KARDLNKRIFETMYYAALEASCELAMEQGPYESYERSP----ILQFDMWGVTPTNQWDWE 557
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFI------- 654
+LR+ I+ G+RNSLL+APMPTAST+QILGNNE EPYTSN+YTR VLSG F
Sbjct: 558 TLRKKIAMYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNVYTRNVLSGSFQVKFHDTL 617
Query: 655 ---------------------------------VVNKHLLKDLTELGLWSHALKTKIIYE 681
V N HL+ DL L LW +K +II
Sbjct: 618 LIRFERITSEITFLQSFLLIAFLCLEDYVISLKVFNMHLMNDLMRLDLWDDDMKLEIIKN 677
Query: 682 NGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTS 741
GS+ I IP+E++ +YKTVWE+ Q+ ++DMA DRG +ID SQSLNI + +P++G +TS
Sbjct: 678 KGSIRNIERIPQEIRDLYKTVWEMSQRDIIDMAVDRGAFIDHSQSLNIFIARPNYGNITS 737
Query: 742 LHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADN 786
+HFY W KG+KTGMYYLRTR A DA++FTVD + L + AD+
Sbjct: 738 MHFYGWQKGLKTGMYYLRTRPAVDAVQFTVDKTRLKDYANANADD 782
>gi|313844113|ref|YP_004061776.1| hypothetical protein OlV1_143 [Ostreococcus lucimarinus virus OlV1]
gi|312599498|gb|ADQ91520.1| hypothetical protein OlV1_143 [Ostreococcus lucimarinus virus OlV1]
Length = 747
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/772 (56%), Positives = 570/772 (73%), Gaps = 33/772 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+KR GR E ++FD IT R+K L+YGLS E CD VAQ+V + +Y G+T ++D L+
Sbjct: 1 MRVVKRSGRIEDMKFDNITNRIKNLTYGLS-EKCDSSKVAQQVASSLYDGITAQEIDTLS 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE M + PDY LA R+ SN+ K+ N+F +K + KA +V ++V
Sbjct: 60 AEICVGMITSDPDYETLATRITASNIQKVCPNNFHIAMKKL---------AKAGIVTEEV 110
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
I A + I RD+DF YFG KTLE+SYL ++D ++E PQ+M MRV++GIH
Sbjct: 111 ARI----AGRVRDDIDTKRDYDFGYFGLKTLEKSYLQRLDGVLMETPQYMFMRVAIGIHG 166
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D DS L+TY MS+ F HATPTLFNAGTP+PQ+SSCFL+ K+DSI GIY TL +CA
Sbjct: 167 EDIDSVLETYDKMSRGMFIHATPTLFNAGTPRPQMSSCFLIANKEDSINGIYGTLTECAQ 226
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+ IH++RA+ S I GTNG S+GI+PML+VFN TARYV+Q G +RKG+ A+Y
Sbjct: 227 ISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI EFL+LR NQG EE R RDLF ALW+PDLFM+RV + G WSLFCP A GL+
Sbjct: 286 LEPWHADIMEFLELRLNQGDEEARCRDLFSALWIPDLFMKRVEESGNWSLFCPDKAPGLS 345
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D+ G EFE LY++YEEE RA + A +W IL SQ ETGTPYML+KD+CN+KSNQ+NL
Sbjct: 346 DAVGEEFEALYTKYEEESRATATVPAADVWKAILKSQTETGTPYMLYKDACNQKSNQKNL 405
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLCTEI+EF+ +ETAVCNLASIALP+YV D + + F
Sbjct: 406 GVIKSSNLCTEILEFTDKDETAVCNLASIALPKYV------------------DPETKTF 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+E+L EVTK +T+NLN++ID N YP+ET R+SN+RHRPIG+G+QGLAD FIL F+S
Sbjct: 448 DYEKLHEVTKTVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRHAFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+++N IFET+Y+ AL+AS+ELA DGPYET+ GSP S+G+LQ DMW +DW
Sbjct: 508 DEAKEINARIFETMYHAALEASSELAEVDGPYETFEGSPASQGVLQFDMWEGETKLHYDW 567
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+E I + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEF++VNKHL
Sbjct: 568 DALKERIKEKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVIVNKHL 627
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+ DL E+GLWS +K ++ GS+ I +IP+E+K +Y+TVWEIK K ++DMAADRG +
Sbjct: 628 VDDLKEIGLWSKDMKDLMVKAGGSIQNIVDIPDEIKKLYRTVWEIKMKDVIDMAADRGRF 687
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+N+ ME P KL+S+H Y+W KG+KTGMYYLR++A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTMSKLSSMHMYSWKKGLKTGMYYLRSKAKARPIQFSLE 739
>gi|194389080|dbj|BAG61557.1| unnamed protein product [Homo sapiens]
Length = 683
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/633 (67%), Positives = 521/633 (82%), Gaps = 19/633 (3%)
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFN 207
FKTLERSYLLK++ +V ERPQHMLMRVSVGIHK+D D+A++TY+L+S+ WFTHA+PTLFN
Sbjct: 67 FKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFN 126
Query: 208 AGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNG 267
AGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+ISKSAGGIG+++ IRA+GSYI GTNG
Sbjct: 127 AGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNG 186
Query: 268 SSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARD 327
+SNG+VPML+V+N+TARYVDQGG KR GAFAIYLEPWH DIFEFLDL+KN GKEE RARD
Sbjct: 187 NSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARD 246
Query: 328 LFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISAR 387
LF+ALW+PDLFM+RV + WSL CP++ GL + WG EFE LY+ YE++GR + V+ A+
Sbjct: 247 LFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQ 306
Query: 388 KLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLA 447
+LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNLGTIK SNLCTEIVE++S +E AVCNLA
Sbjct: 307 QLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLA 366
Query: 448 SIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPI 507
S+AL YV + +DF++LAEVTK++ NLNKIID+N+YP+
Sbjct: 367 SLALNMYV-------------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPV 407
Query: 508 ETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAV 567
SN RHRPIGIG+QGLAD FIL+ PFES EAQ LNK IFETIYY AL+AS +LA
Sbjct: 408 PEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAK 467
Query: 568 KDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTS 627
+ GPYETY GSP+SKGILQ DMWN+TP+D WDW L+E I+K G+RNSLL+APMPTAST+
Sbjct: 468 EQGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTA 527
Query: 628 QILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSK 687
QILGNNE EPYTSNIYTRRVLSGEF +VN HLLKDLTE GLW +K +II NGS+
Sbjct: 528 QILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQS 587
Query: 688 ISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAW 747
I EIP++LK +YKTVWEI QKT++ MAA+RG +IDQSQSLNIH+ +P++GKLTS+HFY W
Sbjct: 588 IPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGW 647
Query: 748 SKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
+G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 648 KQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 680
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYAL-LAGRVAVSNLHKITKNS 93
AETAA Y L + G+VA H + + S
Sbjct: 61 AETAATFKTLERSYLLKINGKVAERPQHMLMRVS 94
>gi|38683667|gb|AAR26844.1| FirrV-1-A20 [Feldmannia irregularis virus a]
Length = 766
Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/773 (56%), Positives = 574/773 (74%), Gaps = 17/773 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKR G +E ++FDK+TAR++KL+ GL ++ DP+ V KV G+Y GVTT +LD LA
Sbjct: 1 MYVIKRSGLRENIKFDKVTARVRKLTDGLDLKYVDPIEVTMKVNQGIYSGVTTRELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A M++NHPDY++LA R+ VSNL+K T++ +S +K + +Y N +G+ A LV+ ++
Sbjct: 61 AETCAYMSINHPDYSVLAARICVSNLYKETESCYSTLVKQLRDYVNPETGEWAPLVSAEL 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ +N + A+ + +DYF +KTLE+SYLLKM+ ++ ERP +LMRV++GIH
Sbjct: 121 VKVVTENREQVQEALDGFAE-TYDYFAYKTLEKSYLLKMNGKIAERPHQLLMRVAIGIHG 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD SAL+TY M +T ATPTLFNAGTP PQ+SSCFL+ KDDSI GI+DTLK CA
Sbjct: 180 DDITSALQTYRDMGSKRYTMATPTLFNAGTPTPQMSSCFLMTCKDDSISGIFDTLKNCAC 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGG+G+SIH++R GSYI GTNG SNG+VPML+VFN+TARYVDQGGG+RKG+ AIY
Sbjct: 240 ISKYAGGLGVSIHDVRGRGSYIRGTNGVSNGLVPMLRVFNNTARYVDQGGGRRKGSIAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI FLDL+KNQG E RARDLFYALWVPDLFM RV + KWSL CP++ GLA
Sbjct: 300 LEPWHADIESFLDLKKNQGNELERARDLFYALWVPDLFMRRVEKNQKWSLMCPNECPGLA 359
Query: 361 DSWGIEFEHLYSQYE-EEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQN 419
+ WG EF+ LY +YE + + + ARKLW IL+ Q+ETGTPY+L+KDS N KSNQQ+
Sbjct: 360 NVWGKEFDALYEKYEASPNKVRATLDARKLWNHILDVQVETGTPYILYKDSVNAKSNQQH 419
Query: 420 LGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRL 479
LG IKSSNLCTEIVE++SP+E AVCNLASI N+S ++ +
Sbjct: 420 LGVIKSSNLCTEIVEYTSPDEIAVCNLASI---------------NLSSVIRHPYTAEAY 464
Query: 480 FDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFE 539
D+ L + + NLN++ID N+YP+ R SN++HRP+GIG+QG AD I+L P++
Sbjct: 465 VDYTALVGLAGSLVRNLNRVIDKNYYPVPEARASNMKHRPVGIGVQGFADALIMLRKPYD 524
Query: 540 SPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWD 599
SPEA +N ++FE+IYY ALKAS + A G +E++ GSP+S+G Q D+W + P+D +D
Sbjct: 525 SPEAAAINVNLFESIYYGALKASLQEAQLYGRHESFPGSPLSQGRFQFDLWGVQPTDTYD 584
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W++LR I ++GVRNSLL APMPTAST+QILGNNE FEP+T+N+Y RRVL+GEF VVNKH
Sbjct: 585 WNTLRASIVEHGVRNSLLCAPMPTASTAQILGNNESFEPFTTNVYNRRVLAGEFPVVNKH 644
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGC 719
LLKDLT L LW +K +++ NGSV I+ IP +K +YKTVWEI Q+ ++D AADRG
Sbjct: 645 LLKDLTSLDLWDDEMKNQLLLHNGSVQNIARIPRWVKDLYKTVWEIPQRVILDHAADRGP 704
Query: 720 YIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
Y+ QSQS+NIHM +P KLTS+ F+ W +G+KTGMYYLRTR AD+I+F VD
Sbjct: 705 YVCQSQSMNIHMAEPTRAKLTSMLFHGWKRGLKTGMYYLRTRPRADSIQFGVD 757
>gi|163955126|ref|YP_001648230.1| hypothetical protein OsV5_153r [Ostreococcus virus OsV5]
gi|163638575|gb|ABY27934.1| hypothetical protein OsV5_153r [Ostreococcus virus OsV5]
Length = 747
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/772 (56%), Positives = 576/772 (74%), Gaps = 33/772 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+KR GR E ++FD IT R+K L+YGLSK +CD VAQ+V + +Y G+ ++D L+
Sbjct: 1 MRVVKRSGRIEDMKFDNITNRIKNLTYGLSK-NCDSSKVAQQVASSLYDGIAAQEIDTLS 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE M + PDY +LA R+ SN+ K+ N+F +K + KA +V ++V
Sbjct: 60 AEVCVGMITSDPDYEILATRIVASNIQKVCPNNFHIAMKKL---------AKAGIVTEEV 110
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
I ++ + I+ RD+DF YFG KTLE+SYL ++D ++E PQ+M MRVS+GIH
Sbjct: 111 ARIAVR----VRDDIVTKRDYDFGYFGLKTLEKSYLQRLDGILMETPQYMFMRVSIGIHG 166
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + L+TY MSQ F HATPTLFNAGTP+PQ+SSCFL+ K DSI+GIY +L +CA
Sbjct: 167 EDIPAVLETYDKMSQGMFIHATPTLFNAGTPRPQMSSCFLIANKGDSIDGIYGSLTECAQ 226
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+ IH++RA+ S I GTNG S+GI+PML+VFN TARYV+Q G +RKG+ A+Y
Sbjct: 227 ISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI +FL+LR NQG EE R RDLF ALW+PDLFM+RV + G+WSLFCP A GL+
Sbjct: 286 LEPWHADIMDFLELRLNQGDEEARCRDLFSALWIPDLFMKRVEEGGQWSLFCPDKAPGLS 345
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
++ G EFE LY++YEEEGRA + A +W IL SQ ETGTPYML+KD+CN KSNQ+NL
Sbjct: 346 EAVGEEFEALYTKYEEEGRANATVPAADVWKAILKSQTETGTPYMLYKDACNTKSNQKNL 405
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++ +ET+VCNLASIALP+YV E+ R F
Sbjct: 406 GTIKSSNLCTEIIEYTDKDETSVCNLASIALPKYVNEE------------------TRSF 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+E+L E+TK++T+NLN++ID N YP+ET R+SN+RHRPIG+G+QGLAD FIL L F+S
Sbjct: 448 DYEKLHEITKVVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRLAFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ +N IFET+Y+ AL+AS+ELA +GPYET+ GSP S+GILQ DMW +DW
Sbjct: 508 DEAKAMNARIFETMYHAALEASSELAEVEGPYETFEGSPASQGILQFDMWQGETKLNYDW 567
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+E I + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEF+VVNKHL
Sbjct: 568 DALKERIREKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVVVNKHL 627
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
++DL ++GLWS +K ++ GS+ I +IP+++K +Y+TVWEIK K ++DMAADRG +
Sbjct: 628 VEDLKKIGLWSKDMKDLMVKAGGSIQNIVDIPDDIKNLYRTVWEIKMKDVIDMAADRGRF 687
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+N+ ME P KL+S+H YAW +G+KTGMYYLR++A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTLSKLSSMHMYAWKQGLKTGMYYLRSKAKARPIQFSLE 739
>gi|378706242|gb|AFC35043.1| hypothetical protein OtV6_135c [Ostreococcus tauri virus RT-2011]
Length = 747
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/772 (56%), Positives = 569/772 (73%), Gaps = 33/772 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKR GR E ++FD IT R+K L+YGLS E+CD VAQ+V + +Y G+ ++D L+
Sbjct: 1 MRVIKRSGRIEDMKFDNITNRIKNLTYGLS-ENCDSSKVAQQVASSLYDGINVQEIDTLS 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE M + PDY LA R+ SN+ K+ N+F +K + KA +V ++V
Sbjct: 60 AEVCVGMITSDPDYETLATRIVASNIQKVCPNNFHIAMKKL---------AKAGIVTEEV 110
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ A + I+ RDFDF YFG KTLE+SYL ++D ++E PQ+M MRV++GIH
Sbjct: 111 AHV----AGIVRNDIVTKRDFDFGYFGLKTLEKSYLQRLDGVLMETPQYMFMRVAIGIHG 166
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + L+TY MSQ F HATPTLFNAGTP+PQ+SSCFL+ K+DSI GIY TL +CA
Sbjct: 167 DDIPAVLETYDKMSQGLFIHATPTLFNAGTPRPQMSSCFLIANKEDSINGIYGTLTECAQ 226
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+ IH+IRA+ S I GTNG S+GI+PML+VFN TARYV+Q G +RKG+ A+Y
Sbjct: 227 ISKWAGGIGMHIHDIRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADI EFL+LR NQG EE R RDLF ALW+PDLFM+RV + G+WSLFCP A GL+
Sbjct: 286 IEPWHADIMEFLELRLNQGDEEARCRDLFSALWIPDLFMKRVEEGGQWSLFCPDKAPGLS 345
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D+ G EFE LY +YE+EGRA + A ++W IL SQ ETGTPYML+KD+CN+KSNQ+NL
Sbjct: 346 DAVGEEFETLYKKYEDEGRANATVPATEVWKAILKSQTETGTPYMLYKDACNQKSNQKNL 405
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++ +ETAVCNLASIALP+YV D + + F
Sbjct: 406 GTIKSSNLCTEILEYTDKDETAVCNLASIALPKYV------------------DREKKTF 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+E+L EVTK +T+NLN++ID N YP+ET R+SN+RHRPIG+G+QGLAD FIL L F+S
Sbjct: 448 DYEKLHEVTKTVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRLAFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+++N IFET+Y+ AL+AS+ELA DG YET+ GSP S+GI Q DMW +DW
Sbjct: 508 DEAKEINARIFETMYHAALEASSELAEVDGSYETFEGSPASQGIFQFDMWEGETKLHYDW 567
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++RE + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEF++VNKHL
Sbjct: 568 DAMRERVKTKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVIVNKHL 627
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+ DL +GLWS +K ++ GS+ I +IP+++K +Y+TVWEIK K ++DMAA RG +
Sbjct: 628 VDDLKNVGLWSKEMKDLMVKAGGSIQNIVDIPDDIKKLYRTVWEIKMKDVIDMAAQRGRF 687
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+N+ ME P KL+S+H YAW +G+KTGMYYLR++A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTMSKLSSMHMYAWKQGLKTGMYYLRSKAKARPIQFSLE 739
>gi|260666002|ref|YP_003212956.1| hypothetical protein H665_p133 [Ostreococcus tauri virus 1]
gi|260161020|emb|CAY39721.1| hypothetical protein OTV1_133 [Ostreococcus tauri virus 1]
Length = 747
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/772 (56%), Positives = 574/772 (74%), Gaps = 33/772 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+KR GR E ++FD IT R+K L+YGLSK +CD VAQ+V + +Y G+ ++D L+
Sbjct: 1 MRVVKRSGRIEDMKFDNITNRIKNLTYGLSK-NCDSSKVAQQVASSLYDGIAAQEIDTLS 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE M + PDY +LA R+ SN+ K+ N+F +K + KA +V ++V
Sbjct: 60 AEVCVGMITSDPDYEILATRIVASNIQKVCPNNFHIAMKKL---------AKAGIVTEEV 110
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
I A + I+ RD+DF YFG KTLE+SYL ++D ++E PQ+M MRVS+GIH
Sbjct: 111 ARI----AGRVRDDIVTKRDYDFGYFGLKTLEKSYLQRLDGILMETPQYMFMRVSIGIHG 166
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D S L+TY MSQ F HATPTLFNAGTP+PQ+SSCFL+ K DSI+GIY +L +CA
Sbjct: 167 EDIPSVLETYDKMSQGMFIHATPTLFNAGTPRPQMSSCFLIANKGDSIDGIYGSLTECAQ 226
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+ IH++RA+ S I GTNG S+GI+PML+VFN TARYV+Q G +RKG+ A+Y
Sbjct: 227 ISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI +FL+LR NQG EE R RDLF ALW+PDLFM+RV + G+WSLFCP A GL+
Sbjct: 286 LEPWHADIMDFLELRLNQGDEEARCRDLFSALWIPDLFMKRVEEGGQWSLFCPDKAPGLS 345
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
++ G EFE LY++YEEEGRA + A +W IL SQ ETGTPYML+KD+CN KSNQ+NL
Sbjct: 346 EAVGEEFEALYTKYEEEGRANATVPAADVWKAILKSQTETGTPYMLYKDACNTKSNQKNL 405
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++ +ET+VCNLASIALP+YV E+ R F
Sbjct: 406 GTIKSSNLCTEIIEYTDKDETSVCNLASIALPKYVNEE------------------TRSF 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+E+L E+TK++T+NLN++ID N YP+ET R+SN+RHRPIG+G+QGLAD FIL L F+S
Sbjct: 448 DYEKLHEITKVVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRLAFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ +N IFET+Y+ AL+AS+ELA +GPYET+ GSP S+GILQ DMW +DW
Sbjct: 508 DEAKAMNARIFETMYHAALEASSELAEVEGPYETFEGSPASQGILQFDMWEGETKLNYDW 567
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+E I G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEF+VVNKHL
Sbjct: 568 DALKERIRGVGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVVVNKHL 627
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
++DL ++GLWS +K ++ GS+ I +IP+++K +Y+TVWEIK K ++DMAADRG +
Sbjct: 628 VEDLKKIGLWSKDMKDLMVKAGGSIQNIVDIPDDIKNLYRTVWEIKMKDVIDMAADRGRF 687
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+N+ ME P KL+S+H YAW +G+KTGMYYLR++A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTLSKLSSMHMYAWKQGLKTGMYYLRSKAKARPIQFSLE 739
>gi|388548927|gb|AFK66128.1| ribonucleoside diphosphate reductase [Ostreococcus lucimarinus
virus OlV3]
Length = 747
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/772 (56%), Positives = 574/772 (74%), Gaps = 33/772 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+KR GR E ++FD IT R+K L+YGLS E+CD VAQ+V + +Y G+T ++D L+
Sbjct: 1 MRVVKRSGRIEDMKFDNITNRIKNLTYGLS-ENCDSSKVAQQVASSLYDGITVQEIDTLS 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE + + PDY +LA R+ SN+ K+ N+F ++K + KA +V ++V
Sbjct: 60 AEVCIGLITSDPDYEILATRITASNIQKVCPNNFHISMKKL---------AKAGIVTEEV 110
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
I A + I RD+DF YFG KTLE+SYL ++D ++E PQ+M MRV++GIH
Sbjct: 111 ARI----AGRVRDDIDTKRDYDFGYFGLKTLEKSYLQRLDGILMETPQYMFMRVAIGIHG 166
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D DS L+TY MSQ F HATPTLFNAGTP+PQ+SSCFL+ K+DSI GIY TL +CA
Sbjct: 167 EDIDSVLETYDKMSQGMFIHATPTLFNAGTPRPQMSSCFLIANKEDSINGIYGTLTECAQ 226
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+ IH++RA+ S I GTNG S+GI+PML+VFN TARYV+Q G +RKG+ A+Y
Sbjct: 227 ISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI EFL+LR NQG EE R RDLF +LW+PDLFM+RV + G+WSLFCP A GL+
Sbjct: 286 LEPWHADIMEFLELRLNQGDEEARCRDLFSSLWIPDLFMKRVEEGGQWSLFCPDKAPGLS 345
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D+ G EFE LY++YE EGRA ++ A +W IL SQ ETGTPYML+KD+CN+KSNQ+NL
Sbjct: 346 DAVGEEFEALYTKYEAEGRANAIVPAADVWKAILKSQTETGTPYMLYKDACNKKSNQKNL 405
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++ +ETAVCNLASIALP+YV E+ R F
Sbjct: 406 GTIKSSNLCTEILEYTDKDETAVCNLASIALPKYVNEE------------------TRTF 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+E+L E+TKI+T+NLN++ID N YP+ET R+SN+RHRPIG+G+QGLAD FIL F+S
Sbjct: 448 DYEKLHEITKIVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRYAFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+++N IFET+Y+ +L+AS ELA G YET+ GSP S+G+LQ DMW +DW
Sbjct: 508 DEAKEMNARIFETMYHASLEASCELAEAQGSYETFEGSPTSQGVLQFDMWEGETKLHYDW 567
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+E I + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEF++VNKHL
Sbjct: 568 DALKERIKEKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVIVNKHL 627
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+ DL ++GLWS +K ++ GS+ IS+IP+++K +Y+TVWEIK K ++DMAA RG +
Sbjct: 628 VNDLKKIGLWSKDMKDLMVKAGGSIQNISDIPDDIKNLYRTVWEIKMKDVIDMAAQRGRF 687
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+N+ ME P KL+S+H YAW +G+KTGMYYLR++A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTMSKLSSMHMYAWKQGLKTGMYYLRSKAKARPIQFSLE 739
>gi|314055218|ref|YP_004063556.1| ribonucleoside-diphosphate reductase, alpha subunit [Ostreococcus
tauri virus 2]
gi|313575109|emb|CBI70122.1| ribonucleoside-diphosphate reductase, alpha subunit [Ostreococcus
tauri virus 2]
gi|388548669|gb|AFK65871.1| ribonucleoside diphosphate reductase [Ostreococcus lucimarinus
virus OlV6]
Length = 747
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/772 (56%), Positives = 572/772 (74%), Gaps = 33/772 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+KR GR E ++FD IT R+K L+YGLS E+CD VAQ+V + +Y G+T ++D L+
Sbjct: 1 MRVVKRSGRIEDMKFDNITNRIKNLTYGLS-ENCDSSKVAQQVASSLYDGITVQEIDTLS 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE + + PDY +LA R+ SN+ K+ N+F +K + KA +V ++V
Sbjct: 60 AEVCIGLITSDPDYEILATRITASNIQKVCPNNFHIAMKKL---------AKAGIVTEEV 110
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
I A + I RD+DF YFG KTLE+SYL ++D ++E PQ+M MRV++GIH
Sbjct: 111 ARI----AGRVRDDIDTKRDYDFGYFGLKTLEKSYLQRLDGILMETPQYMFMRVAIGIHG 166
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D DS L+TY MSQ F HATPTLFNAGTP+PQ+SSCFL+ K+DSI GIY TL +CA
Sbjct: 167 EDIDSVLETYDKMSQGMFIHATPTLFNAGTPRPQMSSCFLIANKEDSINGIYGTLTECAQ 226
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+ IH++RA+ S I GTNG S+GI+PML+VFN TARYV+Q G +RKG+ A+Y
Sbjct: 227 ISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI EFL+LR NQG EE R RDLF +LW+PDLFM+RV + G+WSLFCP A GL+
Sbjct: 286 LEPWHADIMEFLELRLNQGDEEARCRDLFSSLWIPDLFMKRVEEGGQWSLFCPDKAPGLS 345
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D+ G EFE LY++YE EGRA ++ A +W IL SQ ETGTPYML+KD+CN+KSNQ+NL
Sbjct: 346 DAVGEEFEALYTKYEAEGRANAIVPAADVWKAILKSQTETGTPYMLYKDACNKKSNQKNL 405
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+E++ +ETAVCNLASIALP+YV E+ R F
Sbjct: 406 GTIKSSNLCTEILEYTDKDETAVCNLASIALPKYVNEE------------------TRTF 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+E+L E+TKI+T+NLN++ID N YP+ET R+SN+RHRPIG+G+QGLAD FIL F+S
Sbjct: 448 DYEKLHEITKIVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRYAFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+++N IFET+Y+ +L+AS ELA G YET+ GSP S+G+LQ DMW +DW
Sbjct: 508 DEAKEMNARIFETMYHASLEASCELAEAQGSYETFEGSPTSQGVLQFDMWEGETKLNYDW 567
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEF++VNKHL
Sbjct: 568 DVLKERIKEKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVIVNKHL 627
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+ DL ++GLWS +K ++ GS+ IS+IP+++K +Y+TVWEIK K ++DMAA RG +
Sbjct: 628 VNDLKKIGLWSKDMKDLMVKAGGSIQNISDIPDDIKNLYRTVWEIKMKDVIDMAAQRGRF 687
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS+N+ ME P KL+S+H YAW +G+KTGMYYLR++A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTMSKLSSMHMYAWKQGLKTGMYYLRSKAKARPIQFSLE 739
>gi|343474739|emb|CCD13686.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 842
Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/852 (53%), Positives = 592/852 (69%), Gaps = 67/852 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
VI R G E +K+ R++ L G+ + + + V G+Y+ + T +LD+L AE
Sbjct: 14 VINRSGEPEAFDINKLRERVEPLLDGIDLRYVNVTSLIDTVKCGIYENIKTDRLDQLLAE 73
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA HPDY LL GR+AV+ LHK T+ E ++MY + + SG+ A LV++ ++
Sbjct: 74 TAAYSVTKHPDYGLLGGRLAVTALHKTTQGRVLEAFREMYRHNSLTSGRWAPLVSEALWR 133
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMD-----SRVVERPQHMLMRVSVG 177
++ N L+ I Y RD F+YFGFKTLE+SYLL++D +R+VERPQ M +RV++G
Sbjct: 134 VVEANHEELENIIDYSRDLRFEYFGFKTLEKSYLLRVDVGHGATRIVERPQLMFLRVALG 193
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
IH +D + +TY MS +FTHATPTLFNAGTP PQ+SSCFLL M++DSIEGIYDTLK+
Sbjct: 194 IHGNDLERVKETYDHMSLGYFTHATPTLFNAGTPTPQMSSCFLLAMREDSIEGIYDTLKQ 253
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
CAIISKSAGGIG+ +HNIR +GSYI GTNG+SNG+VPML+V N+TARYVDQGGGKRKGAF
Sbjct: 254 CAIISKSAGGIGVHVHNIRCAGSYIAGTNGTSNGLVPMLRVLNNTARYVDQGGGKRKGAF 313
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
A+YLEPWHADI FL L+KN GK++ RARDLFY LW+PDLFMERVR KW+L P+ A
Sbjct: 314 AVYLEPWHADILGFLLLKKNTGKDDLRARDLFYGLWIPDLFMERVRQKEKWTLMDPNTAR 373
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
GL+D +G EF+ LY +YE+EGR I+A LWF IL SQ+ETG P+ML+KD+CN KSNQ
Sbjct: 374 GLSDCYGDEFKDLYERYEKEGRGVKTIAAHDLWFAILESQVETGGPFMLYKDACNCKSNQ 433
Query: 418 QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKN 477
+NLGTIK SNLCTEI+E++S +E AVCNLASIALPR + D K
Sbjct: 434 KNLGTIKCSNLCTEILEYTSKDEIAVCNLASIALPRCI-----------------EDGK- 475
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
F ++L +TKI+T NLNK+ID+N+YP+E +RSN+R+RP+GIG+QGLADTF LL LP
Sbjct: 476 --FSHKKLRNITKIVTRNLNKVIDLNYYPLEEAKRSNMRNRPVGIGVQGLADTFALLSLP 533
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN------ 591
F S A++LN+ IFE IYY A++ S ELA + G YET+ SP S+G+LQ D+W+
Sbjct: 534 FASIRAKRLNRRIFENIYYAAVETSVELAAEQGKYETFDKSPASEGLLQFDLWDRYVRSE 593
Query: 592 -----------------------------ITPSD--RWDWSSLREMISKNGVRNSLLVAP 620
+ D R DW L++ + G+RNSLL+AP
Sbjct: 594 AEVERYKRELEEEDRIDERNRTGGEEKDRVVDDDYERLDWEGLKKRVMSVGMRNSLLIAP 653
Query: 621 MPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIY 680
MPTASTSQILGNNEC EP+TSNIY RRVLSGEF VVNK+L++ L E GLW+ ++ KII
Sbjct: 654 MPTASTSQILGNNECIEPFTSNIYVRRVLSGEFPVVNKYLVRALIEKGLWNDEMRNKIIT 713
Query: 681 ENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLT 740
NGS+S I EIPE+++ +YK VWEI+Q+ L+DMA RG Y+DQSQSLN+ +E+P +L+
Sbjct: 714 YNGSISSIKEIPEDIRELYKVVWEIRQRDLIDMAVARGRYVDQSQSLNLFLEKPTSTQLS 773
Query: 741 SLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN-EKANRADNDVEANLAQVVCSL 799
S+HFY W +G+KTGMYYLR++ AADAIKFTVD E RA + + Q SL
Sbjct: 774 SMHFYTWERGLKTGMYYLRSKPAADAIKFTVDPKEKKKLEDGKRAQQEPQ---EQGGPSL 830
Query: 800 K-NQEECMACGS 810
+ EC+ CGS
Sbjct: 831 RYGSGECLNCGS 842
>gi|91080435|ref|XP_968743.1| PREDICTED: similar to AGAP010198-PA [Tribolium castaneum]
gi|270005755|gb|EFA02203.1| hypothetical protein TcasGA2_TC007860 [Tribolium castaneum]
Length = 798
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/812 (54%), Positives = 582/812 (71%), Gaps = 23/812 (2%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV+KRDGRKE V FDKIT+R++KL Y L+ + DPV + KV G+Y GVTT +LD LAA
Sbjct: 7 YVLKRDGRKEEVHFDKITSRIQKLCYRLNMDIVDPVSITLKVIGGLYPGVTTVELDTLAA 66
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
ETA M +HPDYA LA R+AVSNL K TK FS+ I D+Y+ + ++G+K L++D Y
Sbjct: 67 ETAIVMGADHPDYATLAARIAVSNLQKQTKKHFSDVISDLYHAVDPQTGEKTPLISDQHY 126
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
EIIMKNA+ L+ I+YDRDF ++YF FK LERSYL K++ + VERPQHMLMRV+VGIH +
Sbjct: 127 EIIMKNASRLNSCIVYDRDFSYNYFAFKLLERSYLFKINGKTVERPQHMLMRVAVGIHGE 186
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D DSA++TY+ MS+ +F H++ TL AGTP P L S + + M DDS+EGIY+ + C I
Sbjct: 187 DIDSAIETYNYMSEGYFIHSSATLLTAGTPYPYLPSTYSIAMPDDSLEGIYECISNCIKI 246
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
S + G I + I NIRA G+ I GTNG SNG+VPML+VFN++A ++++ + AI+L
Sbjct: 247 SNTTGRISVHIQNIRAKGTEIAGTNGVSNGLVPMLRVFNNSA-WLNRQSENQPSNQAIFL 305
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHADI +FL+L++ GK+E RARDL YALWVPDLFM RV++D KWSL CP A GL +
Sbjct: 306 EPWHADILDFLNLKRTTGKDEYRARDLQYALWVPDLFMHRVKNDEKWSLMCPHQAQGLPN 365
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
WG EFE LY +YE EGR I AR +W I SQ+ETG+PY+L+KD+CN+KSNQQNLG
Sbjct: 366 CWGQEFEKLYEKYESEGRFVKQIPARDVWRAICVSQMETGSPYILYKDACNKKSNQQNLG 425
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSS+L TE +++SS +E A C AS+AL +V + + +D
Sbjct: 426 TIKSSSLSTESIQYSSSDEIAACITASVALNMFV------------------NPERNGYD 467
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
FE+L +V K +T+NLNK IDV+ YP R SNLRHRPIGIG+QGLADTFILL +PFESP
Sbjct: 468 FEKLKQVVKTLTKNLNKAIDVSAYPSPEARTSNLRHRPIGIGVQGLADTFILLRMPFESP 527
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA+ LN IFET+YY AL+AS+E+A +DGPY TY GSP+S+G LQ DMW + P+ WDW
Sbjct: 528 EARSLNVQIFETLYYAALEASSEIAERDGPYSTYDGSPLSQGRLQYDMWGVEPTKLWDWV 587
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
+L++ I+K+GVRNSLLVA +PT ST+QILGNN+ EPY SN+ RRV S EF VN+HLL
Sbjct: 588 ALKQRIAKHGVRNSLLVALIPTISTAQILGNNQSIEPYLSNVQVRRVNSSEFRDVNQHLL 647
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
KDLTE GLW+ LK ++I NGSV I+ IP++LK IYKTVWEI QK +++MAADRG +I
Sbjct: 648 KDLTERGLWTSDLKQEVIERNGSVQNIAGIPDDLKCIYKTVWEIPQKIVIEMAADRGAFI 707
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA---DAIKFTVDTSVLNN 778
DQSQ++N+H+ P + ++S+HFY W KG+KTGMY LRT + + + V N
Sbjct: 708 DQSQAMNVHIGAPSYAVMSSMHFYGWQKGLKTGMYNLRTNPVSVVQNGNRSKVSVVQENG 767
Query: 779 EKANRADNDVEANLAQVVCSLKNQEECMACGS 810
EK++ E + A + CSL+N C C +
Sbjct: 768 EKSDDMKKSPEED-AALQCSLQNPGACEMCSA 798
>gi|342185899|emb|CCC95384.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 842
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/852 (53%), Positives = 591/852 (69%), Gaps = 67/852 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
VI R G E +K+ R++ L G+ + + + V G+Y+ + T +LD+L AE
Sbjct: 14 VINRSGEPEAFDINKLRERVEPLLDGIDLRYVNVTSLIDTVKCGIYENIKTDRLDQLLAE 73
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA HPDY LL GR+AV+ LHK T+ E ++MY + + SG+ A LV++ ++
Sbjct: 74 TAAYSVTKHPDYGLLGGRLAVTALHKTTQGRVLEAFREMYRHNSLTSGRWAPLVSETLWR 133
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMD-----SRVVERPQHMLMRVSVG 177
++ N L+ I Y RD F+YFGFKTLE+SYLL++D +R+VERPQ M +RV++G
Sbjct: 134 VVEANHEELENIIDYSRDLRFEYFGFKTLEKSYLLRVDVGHGATRIVERPQLMFLRVALG 193
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
IH +D + +TY MS +FTHATPTLFNAGTP PQ+SSCFLL M++DSIEGIYDTLK+
Sbjct: 194 IHGNDLERVKETYDHMSLGYFTHATPTLFNAGTPTPQMSSCFLLAMREDSIEGIYDTLKQ 253
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
CAIISKSAGGIG+ +HNIR +GSYI GTNG+SNG+VPML+V N+TARYVDQGGGKRKGAF
Sbjct: 254 CAIISKSAGGIGVHVHNIRCAGSYIAGTNGTSNGLVPMLRVLNNTARYVDQGGGKRKGAF 313
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
A+YLEPWHADI FL L+KN GK++ RARDLFY LW+PDLFMERVR KW+L P+ A
Sbjct: 314 AVYLEPWHADILGFLLLKKNTGKDDLRARDLFYGLWIPDLFMERVRQKEKWTLMDPNTAR 373
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
GL+D +G EF+ LY +YE EGR I+A LWF IL SQ+ETG P+ML+KD+CN KSNQ
Sbjct: 374 GLSDCYGDEFKDLYERYEMEGRGVKTIAAHDLWFAILESQVETGGPFMLYKDACNCKSNQ 433
Query: 418 QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKN 477
+NLGTIK SNLCTEI+E++S +E AVCNLASIALPR + D K
Sbjct: 434 KNLGTIKCSNLCTEILEYTSKDEIAVCNLASIALPRCI-----------------EDGK- 475
Query: 478 RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLP 537
F ++L +TKI+T NLNK+ID+N+YP+E +RSN+R+RP+GIG+QGLADTF LL LP
Sbjct: 476 --FSHKKLRNITKIVTRNLNKVIDLNYYPLEEAKRSNMRNRPVGIGVQGLADTFALLSLP 533
Query: 538 FESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN------ 591
F S A++LN+ IFE IYY A++ S ELA + G YET+ SP S+G+LQ D+W+
Sbjct: 534 FASIRAKRLNRRIFENIYYAAVETSVELAAEQGKYETFDKSPASEGLLQFDLWDRFVRSK 593
Query: 592 -----------------------------ITPSD--RWDWSSLREMISKNGVRNSLLVAP 620
+ D R DW L++ + G+RNSLL+AP
Sbjct: 594 AEVERYKRELEEEDQIDERNRTGGEEKDRVVDDDYERLDWEGLKKRVMSVGMRNSLLIAP 653
Query: 621 MPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIY 680
MPTASTSQILGNNEC EP+TSNIY RRVLSGEF VVNK+L++ L E GLW+ ++ KII
Sbjct: 654 MPTASTSQILGNNECIEPFTSNIYVRRVLSGEFPVVNKYLVRALIEKGLWNDEMRNKIIT 713
Query: 681 ENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLT 740
NGS+S I EIPE+++ +YK VWEI+Q+ L+DMA RG Y+DQSQSLN+ +E+P +L+
Sbjct: 714 YNGSISSIKEIPEDIRELYKVVWEIRQRDLIDMAVARGRYVDQSQSLNLFLEKPTSTQLS 773
Query: 741 SLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN-EKANRADNDVEANLAQVVCSL 799
S+HFY W +G+KTGMYYLR++ AADAIKFTVD E RA + + Q SL
Sbjct: 774 SMHFYTWERGLKTGMYYLRSKPAADAIKFTVDPKEKKKLEDGKRAQQEPQ---EQGGPSL 830
Query: 800 K-NQEECMACGS 810
+ EC+ CGS
Sbjct: 831 RYGSGECLNCGS 842
>gi|294660114|ref|XP_462554.2| DEHA2G23276p [Debaryomyces hansenii CBS767]
gi|199434472|emb|CAG91065.2| DEHA2G23276p [Debaryomyces hansenii CBS767]
Length = 861
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/780 (56%), Positives = 571/780 (73%), Gaps = 23/780 (2%)
Query: 17 KITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYAL 76
K+ L+ L++ L E+ + KV G+ ++ L EL AE+ A + HPD+++
Sbjct: 23 KLLHFLENLAFELDTEYISLEEIVNKVIDGLPDLISVKDLLELLAESIATKIIYHPDHSI 82
Query: 77 LAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAII 136
LAGRV NL K+T +FS + + NY + ++G+ +V+D+ ++ +M++ LD I
Sbjct: 83 LAGRVEAVNLQKMTDYTFSSNVIRLRNYKSNKTGRSYGVVSDEYFKTVMEHKHVLDSIID 142
Query: 137 YDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQH 196
RD + YFG KTL+ SYLLK+D+ V E PQ M +RV++GIH DD DS ++TY LMSQ
Sbjct: 143 SRRDLELTYFGIKTLQNSYLLKLDNVVSETPQFMFLRVAIGIHGDDIDSVIETYELMSQK 202
Query: 197 WFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIR 256
+F HA+PTLFN+GT LSSCFLL M+DDSI+GIY TL K A+ISK++GGIGL +HNIR
Sbjct: 203 YFIHASPTLFNSGTEYNYLSSCFLLAMEDDSIDGIYKTLHKSALISKASGGIGLHVHNIR 262
Query: 257 ASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRK 316
SGSYI +NG+S+G+VPML+VFN+TARYVDQGG KR GAFAIY+EPWH DI LDL+K
Sbjct: 263 GSGSYIASSNGTSSGLVPMLRVFNNTARYVDQGGNKRPGAFAIYIEPWHCDIISILDLKK 322
Query: 317 NQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEE 376
N GKEE RARDLFY LW+PDLFMERV+ D WSLF P GL+D +G F+ LY +YEE
Sbjct: 323 NHGKEEMRARDLFYGLWIPDLFMERVKQDLDWSLFSPDITPGLSDCYGDAFKTLYEKYEE 382
Query: 377 EGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFS 436
G+A I A+KLW IL Q ETG PYMLFKD+CN KSNQ+NLGTIKSSNLC EI+E+S
Sbjct: 383 SGKAIRTIKAQKLWRAILECQTETGGPYMLFKDACNSKSNQRNLGTIKSSNLCCEIIEYS 442
Query: 437 SPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENL 496
SPEETAVCNL S+ALP ++ ++S +DF++L VTK++ +NL
Sbjct: 443 SPEETAVCNLGSLALPSFI-----------------KNSNELEYDFDKLHTVTKVLAKNL 485
Query: 497 NKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYY 556
NKIID+ YPIE+ + SN+R+RPI +G+QGLAD F+ L LPF+S +A+ LN IFETIY+
Sbjct: 486 NKIIDITKYPIESAKFSNMRNRPIAVGVQGLADLFLELRLPFDSNQAKVLNTQIFETIYH 545
Query: 557 HALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW-DWSSLREMISKNGVRNS 615
A++ S ELA+KDGPY+T+ GSP+S+G+ Q D+WN PS + DW L+ GVRNS
Sbjct: 546 AAVEVSIELAIKDGPYDTFKGSPISEGLFQFDLWNHKPSQLYSDWDELKLKAKTLGVRNS 605
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALK 675
LLVAPMPTASTSQILG NECFEPYTSNIY RRVLSGEF VVNK+L+KDL +LG+W+ ++K
Sbjct: 606 LLVAPMPTASTSQILGFNECFEPYTSNIYNRRVLSGEFQVVNKYLMKDLIDLGIWNSSMK 665
Query: 676 TKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPD 735
KII ENGS+ I IP+ELK +YKTVWEI QK ++++AADRG +IDQSQS+NIH++ P
Sbjct: 666 NKIILENGSIQNIPSIPKELKQLYKTVWEISQKVIIELAADRGKFIDQSQSMNIHLQDPT 725
Query: 736 HGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQV 795
GKLTS HFYAW KG+KTGMYYLRT+AA AI+FTVD + ++ + D EA+++ +
Sbjct: 726 FGKLTSSHFYAWEKGLKTGMYYLRTQAATRAIQFTVDLA-----ESRKLDVQPEADMSTL 780
>gi|449277321|gb|EMC85547.1| Ribonucleoside-diphosphate reductase large subunit [Columba livia]
Length = 623
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/642 (67%), Positives = 519/642 (80%), Gaps = 20/642 (3%)
Query: 170 MLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
MLMRV+VGIHK D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLLCMKDDSIE
Sbjct: 1 MLMRVAVGIHKHDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIE 60
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
GIYDTLK CA+ISKSAGGIGL++ IRA+GSYI GTNGSSNG+VPML+V+N+TARYVDQG
Sbjct: 61 GIYDTLKHCALISKSAGGIGLAVSCIRATGSYIAGTNGSSNGLVPMLRVYNNTARYVDQG 120
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G KR GAFAIYLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WS
Sbjct: 121 GNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWS 180
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD 409
L CP++ GL + WG EFE LY YE +GR + V+ A++LW+ I+ SQ ETGTPYML+KD
Sbjct: 181 LMCPNECPGLDEVWGDEFEKLYESYERQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKD 240
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
+CNRKSNQQNLGTIK SNLCTEIVE++S +E AVCNLASIAL YV
Sbjct: 241 ACNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------- 286
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
+ +DF++LAEVTK+I NLNKIID+N+YP+ RSN RHRPIGIG+QGLAD
Sbjct: 287 -----TSEHTYDFKKLAEVTKVIVRNLNKIIDINYYPVPEAERSNRRHRPIGIGVQGLAD 341
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
FIL+ PFESPEAQ+LN+ IFETIYY AL+AS ELA + GPYETY GSP+SKGILQ DM
Sbjct: 342 AFILMRYPFESPEAQRLNQHIFETIYYGALEASCELAREQGPYETYEGSPVSKGILQYDM 401
Query: 590 WNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL 649
WN+TPSD WDW +L+E I+K GVRNSLL++PMPTAST+QILGNNE EPYTSNIYTRRVL
Sbjct: 402 WNVTPSDLWDWKALKEKIAKYGVRNSLLLSPMPTASTAQILGNNESIEPYTSNIYTRRVL 461
Query: 650 SGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKT 709
SGEF VVN HLLKDLTE GLW+ +K +II NGS+ I EIPE+LK +YKTVWEI QKT
Sbjct: 462 SGEFQVVNPHLLKDLTERGLWNEEMKNQIIAHNGSIQNIPEIPEDLKQLYKTVWEISQKT 521
Query: 710 LVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKF 769
++ MAADRG +IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRT+ AA+ I+F
Sbjct: 522 ILKMAADRGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQF 581
Query: 770 TVDTSVLNNEKANRADNDVEANLAQ-VVCSLKNQEECMACGS 810
T++ L + + + + +VCSL+N+EEC+ CGS
Sbjct: 582 TLNKEKLREREKANKEEEEKERNKAAMVCSLENREECLMCGS 623
>gi|313768342|ref|YP_004062022.1| hypothetical protein MpV1_139c [Micromonas sp. RCC1109 virus MpV1]
gi|312599038|gb|ADQ91062.1| hypothetical protein MpV1_139c [Micromonas sp. RCC1109 virus MpV1]
Length = 749
Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/778 (55%), Positives = 574/778 (73%), Gaps = 35/778 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKR GR E ++FD +T R+K L+YGLS + CD VAQ+V + +Y +TT ++D L+
Sbjct: 1 MRVIKRSGRIEDMKFDNVTNRIKNLTYGLS-DKCDSSKVAQQVFSSMYDNITTQEIDTLS 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE M + PDY LA R+ SN+ K+ N+F ++ + +KA ++ D+V
Sbjct: 60 AEICVGMITSDPDYETLATRIVASNIQKVCPNNFHLAMRKL---------QKAGIITDEV 110
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
E+ A + I DRDFDF YFG KTLE+SYL ++D +++E PQ+M MRV++GIH
Sbjct: 111 VEV----AQQVKEHIKSDRDFDFGYFGLKTLEKSYLQRVDGKLIETPQYMFMRVAIGIHG 166
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D SAL TY+ MSQ F HATPTLFNAGTP+PQ+SSCFL+ K DSI+GIY TL +CA
Sbjct: 167 KDVPSALDTYNKMSQGLFIHATPTLFNAGTPRPQMSSCFLIANKADSIDGIYGTLTECAQ 226
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+ IH+IRA+ S I GTNG S+GI+PML+VFN TARYV+Q G +RKG+ A+Y
Sbjct: 227 ISKWAGGIGMHIHDIRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI +FL+LR NQG EE R RDLF A+W+PDLFM+RV + G WSLFCP A GL+
Sbjct: 286 LEPWHSDIMDFLELRLNQGDEEARCRDLFSAMWIPDLFMKRVEEGGNWSLFCPDKAKGLS 345
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YEEEG A + A +W IL SQ ETGTPYML+KD+CN KSNQ+NL
Sbjct: 346 DVYGQEFEDLYTKYEEEGLANATVPAADVWKAILKSQTETGTPYMLYKDACNSKSNQKNL 405
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLCTEI+E++ +ET+VCNLASIALP+YV + + + F
Sbjct: 406 GVIKSSNLCTEILEYTDKDETSVCNLASIALPKYV------------------NKETKTF 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+++L E+TK +T+NLN++ID N YP+ET RRSN++HRPIG+G+QGLAD FIL GLPF+
Sbjct: 448 DYDKLHEITKTVTKNLNRVIDRNFYPVETARRSNMKHRPIGLGVQGLADVFILCGLPFDC 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN--ITPSDRW 598
E++ +N IFET+Y+ AL+AS+ELA +G YE++ GSP ++G+LQ DMW+ S R+
Sbjct: 508 EESRLMNAHIFETMYHAALEASSELAEVEGSYESFKGSPAAEGVLQPDMWDGETKFSGRY 567
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
DW ++RE + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEF+VVNK
Sbjct: 568 DWDAMRERVKTKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVVVNK 627
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
HL+ DL ++GLWS +K ++ GS+ I +IP+++K +YKTVWEI QK ++DMAADRG
Sbjct: 628 HLVDDLKKVGLWSKEMKDLMVKAGGSIQNIVDIPDDIKNLYKTVWEISQKCIIDMAADRG 687
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
+IDQSQS+N+ ME P KL+S+H YAW G+KTGMYYLR++A A I+F+++ +
Sbjct: 688 RFIDQSQSMNLFMESPTLSKLSSMHMYAWKAGLKTGMYYLRSKAKARPIQFSLEPDCM 745
>gi|322792463|gb|EFZ16447.1| hypothetical protein SINV_80023 [Solenopsis invicta]
Length = 802
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/821 (56%), Positives = 579/821 (70%), Gaps = 70/821 (8%)
Query: 39 VAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETI 98
VA +V G+Y GVTT LD LAAETAA M NHPDYA+LA R+ VSNLHK TK SFSE +
Sbjct: 3 VAIQVIRGLYSGVTTVILDNLAAETAATMATNHPDYAILAARIDVSNLHKETKKSFSEVM 62
Query: 99 KDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK 158
D+Y N + + ++++ Y II NA LD AIIYDRDF ++Y GFKTLERSYLLK
Sbjct: 63 HDLYYARNSITNQHTPIISEHYYNIIKNNADRLDSAIIYDRDFSYNYIGFKTLERSYLLK 122
Query: 159 MDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSS- 217
++ ++VERPQHMLMRV+VGIH++D D ++TY+ +S+ +FTHA+PTLFNA T Q+SS
Sbjct: 123 INGKIVERPQHMLMRVAVGIHENDIDKVIETYNYLSERYFTHASPTLFNACTNNQQMSSL 182
Query: 218 --------CFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSS 269
CFLL +++DSI+GIY LKKC++ISK AGGIG+++H IRA + TN ++
Sbjct: 183 RLISEALLCFLLTLENDSIKGIYSMLKKCSLISKYAGGIGINVHCIRAKSA--EDTN-TT 239
Query: 270 NGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLF 329
NG+V +L+++N+ A YVDQGG KR GAFAIYLEPWHADIFEFL+L++N G RARDLF
Sbjct: 240 NGLVSVLKLYNEIAVYVDQGGNKRPGAFAIYLEPWHADIFEFLELKRNIGDGNMRARDLF 299
Query: 330 YALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKL 389
Y LW+PDLFMERV +D WSL CP ++ GLAD WG EF+ LY +YE+EGR + + AR +
Sbjct: 300 YGLWIPDLFMERVYNDEMWSLMCPYESPGLADVWGDEFKELYIRYEKEGRYRKQVEARTV 359
Query: 390 WFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASI 449
W IL SQ ETGTPYML+KD CNRKSN Q+LGTIK SNLCTEIVE+S P E AVCNLASI
Sbjct: 360 WLAILRSQGETGTPYMLYKDHCNRKSNHQHLGTIKCSNLCTEIVEYSGPGEVAVCNLASI 419
Query: 450 ALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIET 509
A+ +V ++ + FDF++L V KI+T NL+K+IDVN YPI
Sbjct: 420 AVNMFV------------------NTDTKTFDFDKLKTVAKIVTRNLDKVIDVNFYPIPE 461
Query: 510 TRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKD 569
T+ SN +HRPIGIGIQGLAD F+L+ F+S EA++LN IFET+YY AL+ S ELA +
Sbjct: 462 TKASNQKHRPIGIGIQGLADAFLLMRYSFDSKEAKELNIKIFETLYYGALECSCELAAEK 521
Query: 570 GPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQI 629
G YETY GSP+SKGILQ DMWN+ P+D W+W L+ I+++GVRNSLL+APMPTAST+QI
Sbjct: 522 GTYETYQGSPVSKGILQYDMWNVKPTDLWNWDELKAKIAEHGVRNSLLIAPMPTASTAQI 581
Query: 630 LGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKIS 689
LGNNE EPYTSNIY RRVLSGEF++VN HLL+DLT GLW ++ +I+ GSV I
Sbjct: 582 LGNNESIEPYTSNIYVRRVLSGEFVIVNPHLLRDLTARGLWDEDMQNEILANFGSVQNIE 641
Query: 690 EIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSK 749
IP++LK +YKTVWEI QK +++MAADRG +IDQSQSLN+H+ P KLTS+HF+ W
Sbjct: 642 RIPDDLKMLYKTVWEIPQKVILEMAADRGAFIDQSQSLNVHIGDPTTEKLTSMHFFGWRS 701
Query: 750 GMKTGMYYLRTRAAADAIKFTVDTSVLNNE-----------------------------K 780
G+KTGMYYLRT+ AA+ I+FTVD S L + K
Sbjct: 702 GLKTGMYYLRTKPAANPIQFTVDQSKLQSRDSISSASNTSTSTINSTPINSTPIHQSPNK 761
Query: 781 ANRADNDVE----------ANL-AQVVCSLKNQEECMACGS 810
D+D E NL A + CS KN+E C AC S
Sbjct: 762 DVNGDDDAEKRKQLSQQASKNLEAMLACSRKNKEACTACSS 802
>gi|297837607|ref|XP_002886685.1| hypothetical protein ARALYDRAFT_893641 [Arabidopsis lyrata subsp.
lyrata]
gi|297332526|gb|EFH62944.1| hypothetical protein ARALYDRAFT_893641 [Arabidopsis lyrata subsp.
lyrata]
Length = 688
Score = 918 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/631 (68%), Positives = 518/631 (82%), Gaps = 30/631 (4%)
Query: 135 IIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMS 194
I+YDRDFD+D+FGFKTLER YLLK+ +VVERPQHMLMRV VGIH +D DSA+KTYHLMS
Sbjct: 82 IVYDRDFDYDFFGFKTLERLYLLKVHGKVVERPQHMLMRVVVGIHMEDIDSAIKTYHLMS 141
Query: 195 QHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHN 254
Q FTHA+PTLFNAGTP+PQLSS FL+CM+DDSIE TL+KC +I KSAG I +S+HN
Sbjct: 142 QRLFTHASPTLFNAGTPRPQLSSSFLICMRDDSIES---TLQKCDVIRKSAGSISVSVHN 198
Query: 255 IRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDL 314
I+ + NG+VPML V DQGGGK+ G FA+YLEPWHADIFEFL +
Sbjct: 199 IQGT-----------NGVVPMLDV--------DQGGGKKNGPFAVYLEPWHADIFEFLKI 239
Query: 315 RKNQGK-EECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQ 373
+KN GK + + + ALW+PDLFMERV+ DGKWSLFCP++A GLAD WG EFE LY++
Sbjct: 240 QKNHGKVQNSQEEHMAIALWIPDLFMERVKHDGKWSLFCPNEAPGLADCWGTEFERLYTK 299
Query: 374 YEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIV 433
YE EG+AK V A++ +F+IL SQ+ETG PYMLFKDSCNRKSNQQNLGTIKSS+LCT ++
Sbjct: 300 YEREGKAKKVFPAQEPFFDILTSQLETGMPYMLFKDSCNRKSNQQNLGTIKSSSLCTGVI 359
Query: 434 EFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIIT 493
E++SP ET VCNLASIAL VP+ S+ SKL GS SK+R FD+++LAEVT I+T
Sbjct: 360 EYTSPTETTVCNLASIAL-------DVPLDSHPSKLAGSLRSKSRYFDYDKLAEVTAIVT 412
Query: 494 ENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFET 553
+L++IID N+YP+ET SN+RHRPIGIG+QGLAD FILLG+PF+SPEAQ+LNKDIFET
Sbjct: 413 NDLDRIIDGNYYPVETAETSNMRHRPIGIGVQGLADAFILLGMPFDSPEAQKLNKDIFET 472
Query: 554 IYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVR 613
IYYHALKAS+ELA ++ YETY GSPMSKGILQ DMWN+TPS+RWDW LREMISKNGVR
Sbjct: 473 IYYHALKASSELAARNDAYETYKGSPMSKGILQPDMWNVTPSNRWDWDFLREMISKNGVR 532
Query: 614 NSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHA 673
NSLLV+ MPTASTSQILGNNE FEPYTSNIY+ R LSGE I+VNKHLL DLTE+GLW+
Sbjct: 533 NSLLVSLMPTASTSQILGNNESFEPYTSNIYSHRGLSGESILVNKHLLHDLTEMGLWTPT 592
Query: 674 LKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQ 733
LK KII ENGS+ + EIP+++KAIY+T WEIKQ+T+VDMA DRGCYIDQSQ+LNI++E+
Sbjct: 593 LKEKIIDENGSIRNVPEIPDDMKAIYRTAWEIKQRTVVDMAVDRGCYIDQSQTLNINLEE 652
Query: 734 PDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
P + KLTSLHFY W+KG+KTGM+YLR+RA
Sbjct: 653 PSYQKLTSLHFYTWTKGLKTGMHYLRSRATT 683
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 30/42 (71%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQK 42
MYV+KRDG E V DKIT RL KLS GLS HCDP L+ +K
Sbjct: 5 MYVVKRDGWLETVDLDKITLRLNKLSNGLSSYHCDPSLLLRK 46
>gi|357542100|gb|AET84860.1| ribonucleotide reductase [Micromonas pusilla virus SP1]
Length = 749
Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/774 (56%), Positives = 567/774 (73%), Gaps = 35/774 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR GR E ++FD +T R+K L+ GLS E+CD VAQ+V + +Y G+TT ++D L+
Sbjct: 1 MRVTKRSGRIEDMKFDNVTNRIKNLTQGLS-ENCDSTKVAQQVFSSLYDGITTQEIDILS 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE M + PDY LA R+ SN+HK+ N+F ++ + +K ++ D+V
Sbjct: 60 AEICIGMITSDPDYETLATRLVASNIHKVCPNNFHLAMRKL---------QKCKIITDEV 110
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
E+ A + I DRDFDF YFG KTLE+SYL ++ ++VE PQ+M MRVS+GIH
Sbjct: 111 VEV----AQQVKEYIKTDRDFDFGYFGIKTLEKSYLQRVGGKIVETPQYMFMRVSIGIHG 166
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D S L TY MSQ +F HATPTLFNAGTP+PQ+SSCFL+ K+DSI GIY TL +CA
Sbjct: 167 KDIPSVLDTYDKMSQGYFIHATPTLFNAGTPRPQMSSCFLIANKEDSINGIYGTLTECAQ 226
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+ IH+IRA+ S I GTNG S+GI+PML+VFN TARYV+Q G +RKG+ A+Y
Sbjct: 227 ISKWAGGIGMHIHDIRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI +FL++R NQG +E R RDLF ALW+PDLFM+RV + GKWSLFCP A GL+
Sbjct: 286 LEPWHADIMDFLEIRLNQGDDEARCRDLFSALWIPDLFMKRVEEGGKWSLFCPDTAKGLS 345
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YEEEG A + A +W IL SQ ETGTPYML+KD+CN KSNQ+NL
Sbjct: 346 DVYGDEFEALYTRYEEEGLATSTVPASDIWKAILKSQTETGTPYMLYKDACNMKSNQKNL 405
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IKSSNLCTEI+E++ +ET+VCNLAS+ALP+YV +++ + F
Sbjct: 406 GVIKSSNLCTEIIEYTDKDETSVCNLASVALPKYV------------------NTETKTF 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L EVTK +T+NLN++ID N YP+ET R SNL+HRPIG+G+QGLAD FIL GL F+
Sbjct: 448 DFAKLHEVTKTVTKNLNRVIDRNFYPVETARNSNLKHRPIGMGVQGLADVFILCGLSFDC 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW--NITPSDRW 598
E++ LN IFET+Y+ AL+AS+ELA DG YET+ GSP S+GILQ +MW S +
Sbjct: 508 EESRLLNSHIFETMYHAALEASSELAEIDGSYETFQGSPASQGILQPEMWEGETKFSGLY 567
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
DW ++RE I G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEF+VVNK
Sbjct: 568 DWEAMRERIKTKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVVVNK 627
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
HL+ DL ++GLWS +K ++ GS+ I +IP+ +K +YKTVWEI QK ++DMAADRG
Sbjct: 628 HLVNDLKKIGLWSKEMKDIMVKAGGSIQNIVDIPDNIKKLYKTVWEISQKCIIDMAADRG 687
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
+IDQSQS+N+ ME P KL+S+H YAW G+KTGMYYLR++A A I+F+++
Sbjct: 688 RFIDQSQSMNLFMESPTMSKLSSMHMYAWKSGLKTGMYYLRSKAKARPIQFSLE 741
>gi|422933669|ref|YP_007003794.1| ribonucleotide reductase subunit 1 [Cyprinid herpesvirus 1]
gi|386686075|gb|AFJ20428.1| ribonucleotide reductase subunit 1 [Cyprinid herpesvirus 1]
Length = 798
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/780 (57%), Positives = 565/780 (72%), Gaps = 32/780 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDG PV K+ R++K + D L+AQ+V AG++ G T ++D L
Sbjct: 5 MTVIKRDGSVVPVDIGKVAERVRKCEI----DSVDCELLAQQVQAGIHNGCKTAEIDVLL 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A TAA+MT HP+Y LLA +V+VSNLH T FS+T + ++ N +A L++D++
Sbjct: 61 AHTAASMTTKHPNYGLLAAKVSVSNLHLQTVPEFSKTCEKLWKNINPDLDVEAPLISDEI 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+++ ++A LD A+I+ D + YFGFKTLERSYLLK +ERPQHMLMR ++ IHK
Sbjct: 121 FKLSQEHAEELDAALIHGNDHTYSYFGFKTLERSYLLKGPKGPIERPQHMLMRCALQIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D S L+TY L+S + HA+PTLFN+G+ +PQLSSCFLL + DDS+ GI +T+++CA+
Sbjct: 181 HDIPSVLETYRLLSNKFMIHASPTLFNSGSSRPQLSSCFLLNLTDDSMAGIMETVRRCAM 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLS+ N+RASGSYI GTNG SNG+VP+L++FN AR VDQ GGKR GAFAIY
Sbjct: 241 ISKYAGGIGLSMSNLRASGSYIAGTNGQSNGLVPVLRIFNMVARLVDQ-GGKRPGAFAIY 299
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADIF+FLDLRKN G +E R RDLF ALWVPDLFM+RVRDDG WSL CP+ GL
Sbjct: 300 MEPWHADIFDFLDLRKNSGVDERRTRDLFTALWVPDLFMQRVRDDGDWSLMCPASCPGLD 359
Query: 361 DSWGIEFEHLYSQYEE-EGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQN 419
WG EF LY QYE G + V+ AR LW +IL SQ+ETG+PYML+KDS N KSN QN
Sbjct: 360 RVWGHEFNELYEQYEATPGAVRRVVKARYLWSQILVSQLETGSPYMLYKDSANAKSNHQN 419
Query: 420 LGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRL 479
LGTI+ SNLCTEI+E++ +E AVCNLASIALP +V++ G +
Sbjct: 420 LGTIRCSNLCTEIMEYTDSQEVAVCNLASIALPEFVQDGGY------------------V 461
Query: 480 FDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFE 539
F+ E LA VTK+ T NLNKIID N YP+E +SNLRHRPIGIG+QGLAD F + +PF
Sbjct: 462 FNHEYLAHVTKVATRNLNKIIDCNFYPLEECSKSNLRHRPIGIGVQGLADVFQRMMMPFT 521
Query: 540 SPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD--- 596
SPEA++LN++IFETIYY AL+AS ELA + GPY +Y GSP+SKGILQ DMWN+ D
Sbjct: 522 SPEAKKLNREIFETIYYAALQASCELAKEHGPYSSYQGSPVSKGILQFDMWNVKDEDLSG 581
Query: 597 RWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVV 656
RWDW+ LR +I ++GVRNSLLVAPMPTAST+QILGNNE EPYTSN Y RRVLSG+F +V
Sbjct: 582 RWDWAELRRLIGEHGVRNSLLVAPMPTASTAQILGNNESIEPYTSNFYQRRVLSGDFQIV 641
Query: 657 NKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAAD 716
N HL+K L GLW+ ++ ++ GSV I PE+LK I+KTVWE+ Q+ ++DMAAD
Sbjct: 642 NPHLVKCLETRGLWNEDMRLQLTIHRGSVQNIPGFPEDLKEIFKTVWELSQRDIIDMAAD 701
Query: 717 RGCYIDQSQSLNIHMEQPDH-----GKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
R +IDQSQSLN+H+ D KLT++H + W KG+KTGMYYLRT+AAAD ++FTV
Sbjct: 702 RAPFIDQSQSLNLHLGHEDDQNIKLKKLTAMHMHGWGKGLKTGMYYLRTKAAADPVQFTV 761
>gi|209171046|ref|YP_002268193.1| agip163 [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436637|gb|ACI28864.1| unknown [Agrotis ipsilon multiple nucleopolyhedrovirus]
Length = 772
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/764 (56%), Positives = 562/764 (73%), Gaps = 28/764 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV+KRDG + VR D+ITA ++ L YGL+ E+ DP V KV GV GV+T +L+ A
Sbjct: 3 LYVVKRDGSHQEVRLDEITALVQSLCYGLNAEYVDPAAVTVKVVKGVRPGVSTEELNAYA 62
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+ AA+MT H DYALLAGR+ V NLHK +SFSE IK+++ + LV+DD+
Sbjct: 63 ADVAASMTYIHYDYALLAGRILVDNLHKRLDSSFSEIIKNLHGH---------GLVSDDL 113
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
I +AA LD AI ++ DF++ YFG+KTLE YLLK+D+RV ERPQHMLMRV++GIH
Sbjct: 114 LRISETHAATLDAAIAHELDFEYKYFGYKTLENGYLLKIDNRVAERPQHMLMRVALGIHG 173
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + A++TY +MSQ FTHA+PTLF+AGT PQ+ SCFLL ++DDSI+GIY TL CA
Sbjct: 174 DDIEDAIETYRMMSQKLFTHASPTLFSAGTRIPQMCSCFLLGVRDDSIDGIYRTLGDCAA 233
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK GGIG+++H +RA GS I+ TNG+++G+ PM++VFN+ R+VDQGG KRKGA A+Y
Sbjct: 234 ISKYGGGIGVNVHQVRARGSKINSTNGTASGLEPMVRVFNNMVRHVDQGG-KRKGALAVY 292
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADI+ L+L++N G E+C+ARDL YALWVPDLFM RV D WSL CP GLA
Sbjct: 293 IEPWHADIYSVLNLKRNMGAEDCKARDLMYALWVPDLFMRRVNADDMWSLMCPHQCPGLA 352
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EGR + + A+ L I+ +Q+ETG PYMLFKD+CNRKSNQQNL
Sbjct: 353 DCYGDEFERLYERYESEGRYRQRVRAQDLHRFIVETQVETGGPYMLFKDACNRKSNQQNL 412
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IK SNLC EIV++S EETAVCNLASIA+ R VR V ++ +
Sbjct: 413 GVIKCSNLCAEIVQYSDAEETAVCNLASIAVNRCVR---------VDEMT---------Y 454
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L +TK++ NLNKIID NHYPI + RRSN +HRPIG+GIQGLAD F+LL +P+ES
Sbjct: 455 DFEKLKAITKVVVRNLNKIIDRNHYPIASARRSNEKHRPIGVGIQGLADAFVLLRMPYES 514
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA LNK I ETIYY AL+AS ELA +DG Y T+ GSP S+G+LQ DMWN TPS WDW
Sbjct: 515 EEAAVLNKQIAETIYYGALEASCELAQRDGSYSTFAGSPASRGVLQYDMWNATPSALWDW 574
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L++ I +G+RNSLLVA MPTA+T+QILGNNE FEP+TSN+Y RRVL+GEF VVN++L
Sbjct: 575 QALKDDIRAHGLRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRRVLAGEFQVVNQYL 634
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+ DL +L +++ ++ I GS+ I IP+ +K +YKT WE+K K +++MAADR +
Sbjct: 635 IDDLIKLNVYTPEIRNAIFAHKGSIQNIEGIPDSVKNLYKTAWEMKAKRMIEMAADRNAF 694
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
IDQSQS N+ + QP + +TS+H Y+W G+KTGMYYLRT+ AA
Sbjct: 695 IDQSQSFNLFVAQPTYAVMTSIHNYSWRCGLKTGMYYLRTKPAA 738
>gi|320581724|gb|EFW95943.1| ribonucleotide reductase large subunit Rnr1 [Ogataea parapolymorpha
DL-1]
Length = 816
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/820 (55%), Positives = 568/820 (69%), Gaps = 31/820 (3%)
Query: 6 RDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAA 65
+ G++ D + L L+ GL+ E ++ KV +G+ + +T +L +L AE +A
Sbjct: 13 KSGKESVFSRDILRNHLLSLAQGLNTEFVSIDVILDKVVSGLPESLTVQELLDLTAEVSA 72
Query: 66 AMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIM 125
++T H D++ LA RV V +L K SFSE + M Y + SL+A DV+EI+
Sbjct: 73 SLTTVHYDHSYLAARVLVRHLQKQVCGSFSENVNRMRQYRPSQYRSFKSLIAADVHEIVN 132
Query: 126 KNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS 185
K+A L+ AI +DRD + DYFGF+T+ERSYLLKMD R E PQ++ MRV+VGIHK + +
Sbjct: 133 KHADVLNKAIDFDRDLELDYFGFRTMERSYLLKMDGRPCETPQYLFMRVAVGIHKGNIER 192
Query: 186 ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSA 245
L+TY LMSQ +F HA+PTLFNAGT P LSSCFLL M DSI GI+ T+ K A+ISK+A
Sbjct: 193 VLETYRLMSQKYFIHASPTLFNAGTETPNLSSCFLLAMDGDSINGIFRTIHKSALISKAA 252
Query: 246 GGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWH 305
GGIG+ + NIRA+GSYI GTNG+SNG+VPM+QVFN TA+YVDQGG KR GAF +YLEPWH
Sbjct: 253 GGIGIHVSNIRAAGSYISGTNGTSNGLVPMVQVFNSTAKYVDQGGNKRPGAFCMYLEPWH 312
Query: 306 ADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGI 365
AD+FEFLDLRKN GKEE RARDLFYALW+PDLFME+V D +W LF + GL+DS+G
Sbjct: 313 ADVFEFLDLRKNHGKEETRARDLFYALWIPDLFMEKVEKDQEWCLFSEDQSPGLSDSYGD 372
Query: 366 EFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKS 425
EF LY++YE EGR + A+KLW IL +Q ETG P++L+KD+CN+KSNQQNLGTIKS
Sbjct: 373 EFVKLYNRYEREGRYIRKVRAQKLWHAILVAQTETGNPFLLYKDACNKKSNQQNLGTIKS 432
Query: 426 SNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERL 485
SNLC EIVE+SS EETAVCNL S+ALP +V + + R FDF+ L
Sbjct: 433 SNLCCEIVEYSSNEETAVCNLGSLALPSFVHD----------------NKGERKFDFKFL 476
Query: 486 AEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQ 545
+V K + NL+ +IDV YP+ SN RHRPI IG+QGLAD F L +PF SPE+++
Sbjct: 477 HDVCKTLARNLDTVIDVGSYPLPEAEVSNKRHRPIAIGVQGLADVFFKLRMPFGSPESRK 536
Query: 546 LNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLRE 605
LN IFETIY+ AL+ SAELA GPY++Y GSP+SKG+LQ D WN PSD WDW L+
Sbjct: 537 LNILIFETIYHAALETSAELAEIYGPYDSYAGSPISKGVLQYDFWNAKPSDMWDWEGLKA 596
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLT 665
I +NGVRNSLLVA MPTASTSQI G ECFEP TSN+Y+RRVLSGEF VVN++L+ DL
Sbjct: 597 KIHRNGVRNSLLVALMPTASTSQIFGFTECFEPITSNMYSRRVLSGEFQVVNRYLIDDLV 656
Query: 666 ELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQ 725
+LGLW +K +I+ GSV I IP + K IYKTVWEI+Q+ L+DMAADR +IDQSQ
Sbjct: 657 DLGLWGPEMKNEILRMEGSVQAIESIPADTKEIYKTVWEIQQRALIDMAADRAPFIDQSQ 716
Query: 726 SLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRAD 785
S+N+ M P KLTS+HFYAW KG+KTG+YYLRT+AAA AIKFTV S + D
Sbjct: 717 SMNLFMRNPTMSKLTSMHFYAWKKGLKTGIYYLRTQAAASAIKFTVTPSRFKRSISESRD 776
Query: 786 ---------NDVEANL------AQVVCSLKNQEECMACGS 810
N+V + C + + E C AC S
Sbjct: 777 TTKRRKSNGNEVTEGYNIYDKDNVLACKVGDPETCDACSS 816
>gi|255721743|ref|XP_002545806.1| ribonucleoside-diphosphate reductase large chain [Candida
tropicalis MYA-3404]
gi|240136295|gb|EER35848.1| ribonucleoside-diphosphate reductase large chain [Candida
tropicalis MYA-3404]
Length = 818
Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/771 (57%), Positives = 566/771 (73%), Gaps = 24/771 (3%)
Query: 17 KITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYAL 76
K+ L++LS+ L D VL + V G+ VT QL AE A+ + +PDYA+
Sbjct: 19 KVLKLLQELSFNLENLQLDDVL--ESVQKGLPATVTVYQLYTFIAEVIASRIIYNPDYAI 76
Query: 77 LAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAII 136
LAGRV + L+ +FS+ ++ + NY K S ++ YE++ K+ DG I
Sbjct: 77 LAGRVELRKLYLKVPYNFSDNVERLRNY-KSHGAKSYSPISSKFYEVVKKHKEFFDGLID 135
Query: 137 YDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQH 196
RD +F YFG KTLE SYLLK+DS E PQ + +RV++GIH +D S +TY LMS+
Sbjct: 136 KSRDDEFTYFGIKTLENSYLLKIDSEPAELPQFLFLRVAIGIHLEDLGSVAETYDLMSKK 195
Query: 197 WFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIR 256
+F HA+PTL+NAG LSSCFL+ MKDDSI+GIY TL + A+ISK++GGIG+ +H +R
Sbjct: 196 YFIHASPTLYNAGGEFNYLSSCFLIAMKDDSIDGIYKTLHESALISKASGGIGIHVHEVR 255
Query: 257 ASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRK 316
++GSYI GTNG +NG+VPML+VFN+TARYVDQGGGKR GAFAIY+EPWH DIF+ L++RK
Sbjct: 256 SNGSYIAGTNGIANGLVPMLRVFNNTARYVDQGGGKRPGAFAIYIEPWHGDIFDILEMRK 315
Query: 317 NQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEE 376
N G EE R RDLFY LW+PDLFM+RV+ D W+L PS+A GL+D +G +F+ LY +YE+
Sbjct: 316 NHGSEELRTRDLFYGLWIPDLFMQRVKADEYWTLMSPSEAPGLSDVYGDDFKELYEKYEK 375
Query: 377 EGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFS 436
+G I A KLW IL SQ ETG PYML+KD+CN KSNQ+NLGTIKSSNLC EIVE+S
Sbjct: 376 QGLGTK-IRAHKLWLAILESQTETGGPYMLYKDACNEKSNQKNLGTIKSSNLCCEIVEYS 434
Query: 437 SPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENL 496
SPEETAVCNL S+ALP Y++ + D + FDFE+L VTK++ +NL
Sbjct: 435 SPEETAVCNLGSLALPTYLK---------------TSDDEVIEFDFEKLHSVTKVLAKNL 479
Query: 497 NKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYY 556
NK+IDV YP+ET SN R+RPI +G+QGLAD F L LPFES A++LN IFETIY+
Sbjct: 480 NKVIDVTLYPVETAEYSNKRNRPIALGVQGLADLFAELRLPFESEAARKLNIQIFETIYH 539
Query: 557 HALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSL 616
AL+AS EL+++DGPYET+ GSP S+GILQ DMWN TPS +DW+ L+E I K G+RNSL
Sbjct: 540 AALEASVELSIQDGPYETFQGSPASEGILQFDMWNHTPSKMYDWNKLKESIQKFGLRNSL 599
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKT 676
LVAPMPTASTSQILG NECFEPYTSN+Y RRVLSGEF VVNK+L+KDL +LG+W+ A++
Sbjct: 600 LVAPMPTASTSQILGFNECFEPYTSNLYNRRVLSGEFQVVNKYLIKDLMDLGIWNSAMRN 659
Query: 677 KIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDH 736
KI+ ENGS+ I IP+++K +YKTVWEI QK ++DMAADRG +IDQSQS+NIH+ +P
Sbjct: 660 KIMMENGSIQNIQSIPKDIKELYKTVWEISQKVIIDMAADRGKFIDQSQSMNIHLREPTF 719
Query: 737 GKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADND 787
GKLTS HFYAW +G+KTGMYYLRT+AA+ AI+FTVD + +A +A N+
Sbjct: 720 GKLTSCHFYAWKQGLKTGMYYLRTQAASRAIQFTVDAT-----EAEKAANE 765
>gi|344303891|gb|EGW34140.1| hypothetical protein SPAPADRAFT_49208 [Spathaspora passalidarum
NRRL Y-27907]
Length = 843
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/774 (55%), Positives = 571/774 (73%), Gaps = 20/774 (2%)
Query: 16 DKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYA 75
DK+ L+ L + L +H + V + G+ + +L E AE A+ V HPDYA
Sbjct: 24 DKLLELLQNLCFNLDTDHLELEAVVSDIARGLPDRIEIEKLYEFVAEALASRIVYHPDYA 83
Query: 76 LLAGRVAVSNLHKITKNSFSETIKDMYNYYNKR-SGKKASLVADDVYEIIMKNAACLDGA 134
+LAGR+ + I +FSE +K + Y + R + S++++ +++MK+AA D
Sbjct: 84 ILAGRIEIKKFDSIVPYTFSENVKRLQAYRHPRVKNRPYSMLSEKYCDVVMKHAAFFDEV 143
Query: 135 IIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMS 194
I RD + YFG KTLE SYLL+M++++ E PQ++ +RV++GIH DD +S ++TY LMS
Sbjct: 144 IDKSRDNELTYFGIKTLENSYLLQMNNQIAETPQYLFLRVAIGIHFDDLESVVETYDLMS 203
Query: 195 QHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHN 254
Q + HA+PTL+N+GT LSSCFLL +K+DSI+GIY TL + A+ISK++GGIG+ +H+
Sbjct: 204 QKYLIHASPTLYNSGTEFNYLSSCFLLAVKEDSIDGIYKTLHQAALISKASGGIGIHMHD 263
Query: 255 IRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDL 314
+RA+GS+I T+G SNG+VPML+VFN+TARYVDQGGGKR GAFA+Y+EPWHADIF+ LD+
Sbjct: 264 VRANGSFIASTSGISNGLVPMLRVFNNTARYVDQGGGKRPGAFAMYIEPWHADIFDILDM 323
Query: 315 RKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQY 374
RKN G EE R RDLFY LWVPDLFM+RV++D +WSLF P +A GL+D +G EF LY +Y
Sbjct: 324 RKNHGNEEQRTRDLFYGLWVPDLFMKRVKEDKEWSLFSPDEAPGLSDVYGDEFVELYEKY 383
Query: 375 EEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVE 434
E EG A I A KLW IL SQ ETG PYML+KD+CN KSNQ+NLGTIK SNLC EI++
Sbjct: 384 EREGLAISTIKAHKLWLAILESQTETGVPYMLYKDACNSKSNQKNLGTIKCSNLCCEIIQ 443
Query: 435 FSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRL-FDFERLAEVTKIIT 493
+SSPEETAVCN+ S+ALP Y+ K +R + L FDF +L +V K++
Sbjct: 444 YSSPEETAVCNIGSLALPSYL------------KTAENRAGEEVLEFDFVKLHKVAKVLV 491
Query: 494 ENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFET 553
+NLNK+IDV YP+ + SN +HRPI IG+QGLAD F+ L LPF+SP+A+ LN IFET
Sbjct: 492 KNLNKVIDVTRYPVPSAELSNKKHRPIAIGVQGLADLFLELRLPFDSPQAKHLNMQIFET 551
Query: 554 IYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW-DWSSLREMISKNGV 612
IY+ A++ S ELA ++GPYE++ GSP S+G+LQ D+WN PS + DW +L+E I G+
Sbjct: 552 IYHAAIEQSTELAFQEGPYESFEGSPASQGLLQFDLWNHKPSPLYDDWDTLKENIKNFGL 611
Query: 613 RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSH 672
RNSLLV PMPTASTSQILG NECFEPYTSNIYTRRVLSGEF VVNK+L+KDL +LG+W+
Sbjct: 612 RNSLLVGPMPTASTSQILGFNECFEPYTSNIYTRRVLSGEFQVVNKYLIKDLIDLGIWNS 671
Query: 673 ALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHME 732
+++ KII ENGS+ I+ IP+E+K +YKTVWEI Q+ ++DMAADRG ++DQSQS+NI+++
Sbjct: 672 SMRNKIIMENGSIQNIASIPQEIKDLYKTVWEISQRVIIDMAADRGKFVDQSQSMNIYLK 731
Query: 733 QPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADN 786
QP GKLTS HFYAW KG+KTGMYYLRT+AA AI+FTVD E+A++ DN
Sbjct: 732 QPTFGKLTSCHFYAWEKGLKTGMYYLRTQAATRAIQFTVDA-----EEASKVDN 780
>gi|241958750|ref|XP_002422094.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Candida dubliniensis CD36]
gi|223645439|emb|CAX40095.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Candida dubliniensis CD36]
Length = 816
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/781 (56%), Positives = 567/781 (72%), Gaps = 25/781 (3%)
Query: 8 GRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAM 67
G +E KI L++ S+ L D ++ + V G+ +T +L AE A+
Sbjct: 9 GEEEEFDSVKIHKLLEEASFNLGDLDLDQLV--ESVQRGLPSTLTIEELYTFIAEVIASR 66
Query: 68 TVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKN 127
+ HP+YA+LAGR+ L+ SFSE ++ + Y R K S ++ Y+++ K+
Sbjct: 67 VIYHPNYAILAGRIETRKLYLKVPYSFSENVERLRKY-RPRESKSYSPISSAFYKVVKKH 125
Query: 128 AACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSAL 187
D I RD YFG KTLE SYLLKM V E PQ++ MRV++GIH++D ++ +
Sbjct: 126 GEFFDKVIDKTRDSSLTYFGIKTLESSYLLKMGGEVAELPQYLFMRVAIGIHQNDLNAIV 185
Query: 188 KTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGG 247
+TY LMSQ +F HA+PTL+NAG+ LSSCFL+ MK+DSI+GI+ TL + A+ISK++GG
Sbjct: 186 ETYDLMSQKYFIHASPTLYNAGSEFNYLSSCFLVAMKEDSIDGIFKTLNEAALISKASGG 245
Query: 248 IGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHAD 307
IG+ +HNIR++G+YI GTNGSSNG+VPML+V+N+TARYVDQGGGKR GAFAIY+EPWH D
Sbjct: 246 IGIHVHNIRSNGAYIAGTNGSSNGLVPMLRVYNNTARYVDQGGGKRPGAFAIYIEPWHGD 305
Query: 308 IFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEF 367
IF+ L++RKN G EE R RDLFY LW+PDLFM+RV+D+ W+LF P++A GL+D +G EF
Sbjct: 306 IFDILEMRKNHGNEEMRTRDLFYGLWIPDLFMKRVKDNSDWTLFSPNEALGLSDVYGEEF 365
Query: 368 EHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSN 427
E LY +YE EG V SA KLW IL SQ ETG PYML+KD+CN KSNQ+N+GTIKSSN
Sbjct: 366 EKLYCKYESEGFGTKV-SAHKLWLAILQSQTETGGPYMLYKDACNTKSNQKNIGTIKSSN 424
Query: 428 LCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAE 487
LC EIVE+SSPEETAVCNLAS+ALP Y++ + FDFE+L
Sbjct: 425 LCCEIVEYSSPEETAVCNLASLALPTYLKTTEDAIA----------------FDFEKLHS 468
Query: 488 VTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLN 547
VTK++T NLNK+IDV YP++T SN RHRPI +G+QGLAD F L LPF+S A+ LN
Sbjct: 469 VTKVLTRNLNKVIDVTKYPVKTAEYSNKRHRPIALGVQGLADLFAELRLPFDSAMAKTLN 528
Query: 548 KDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMI 607
IFETIY+ AL+AS ELA+K+GPYET+ GSP S GILQ DMWN PS +DW++L++ I
Sbjct: 529 IQIFETIYHAALEASVELAMKEGPYETFQGSPASNGILQFDMWNHKPSPMYDWNALKDNI 588
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTEL 667
G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y RRVL+GE+ +VNK+L+KDL +L
Sbjct: 589 QNFGLRNSLLVAPMPTASTSQILGFNECFEPYTSNLYNRRVLAGEYQIVNKYLIKDLMDL 648
Query: 668 GLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSL 727
G+W A++ KII ENGS+ KI IP+E+K +YKTVWE+ QK ++DMAADRG ++DQSQS+
Sbjct: 649 GIWDSAMRNKIIMENGSIQKIPNIPDEIKQLYKTVWELSQKVIIDMAADRGKFVDQSQSM 708
Query: 728 NIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADND 787
NIH+ P GKLTS HFYAW KG+KTGMYYLRT+AA+ AI+FTVD S +A +A N
Sbjct: 709 NIHLRNPTIGKLTSCHFYAWEKGLKTGMYYLRTQAASRAIQFTVDAS-----EAEKAGNK 763
Query: 788 V 788
V
Sbjct: 764 V 764
>gi|131840167|ref|YP_001096176.1| unnamed protein product [Cyprinid herpesvirus 3]
gi|84181499|gb|ABC55102.1| hypothetical protein [Cyprinid herpesvirus 3]
gi|109706742|gb|ABG42968.1| ribonucleotide reductase subunit 1 [Cyprinid herpesvirus 3]
gi|129560660|dbj|BAF48955.1| ribonucleotide reductase large subunit [Cyprinid herpesvirus 3]
Length = 806
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/821 (53%), Positives = 573/821 (69%), Gaps = 30/821 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV KRDG KEP+ K+ R+ + G E DP L+AQK+ G+ G T+++DEL
Sbjct: 5 IYVTKRDGTKEPLDMAKVVERINEC--GFRSESVDPQLLAQKIEPGIGNGCKTSEIDELL 62
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A TA+ MT HPDY+ LA R+AV+NLHK+T FSE K ++ N +G +A L+A
Sbjct: 63 AHTASNMTTTHPDYSKLAARIAVTNLHKLTSPKFSEVCKRLWFNVNPDTGLRAPLIAQKF 122
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+ K+A LD A+ + DF + YFGFKTLERSY+LK +E PQH LMR ++ IH
Sbjct: 123 YEVSQKHAERLDAAVRHHADFGYSYFGFKTLERSYMLKGPEGPIETPQHTLMRCALQIHG 182
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ D+ L+TY +S +FTHA+PTLFN+ +P+PQLSSCFLL MK DS+EGI DT+K CA+
Sbjct: 183 DNIDALLQTYGFLSSRYFTHASPTLFNSCSPKPQLSSCFLLNMKSDSMEGIADTIKSCAL 242
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGG+G+SI N+R G+YI GTNG SNGIVP L++FN R VDQGG KR GA A+Y
Sbjct: 243 ISKHAGGLGMSISNLRGKGAYIKGTNGHSNGIVPTLRIFNALERMVDQGGNKRPGALAVY 302
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH D+F+FL+LRKN G +E R RDLF ALW+PDLFM+RV+D G+WSL CP+ GL
Sbjct: 303 MEPWHVDVFDFLELRKNTGSDEQRTRDLFQALWIPDLFMQRVKDGGEWSLMCPASCPGLD 362
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY++YE EG+A+ + AR LW +L +Q+ETG P+ML+KD+CN KSN Q+L
Sbjct: 363 EVWGPEFEALYTRYEAEGKARRTVKARDLWNSVLVAQLETGGPFMLYKDACNAKSNHQHL 422
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIV++++ EE AVCNLAS+AL +VR + + D +
Sbjct: 423 GTIKCSNLCTEIVQYTNSEEVAVCNLASVALNEFVR------------ITIAEDPYE--Y 468
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF+ LA+V ++IT NLNK+ID N YP+ RSN RHRPIGIG+QGLAD F+++G+PF
Sbjct: 469 DFQLLADVVRMITRNLNKVIDGNFYPVPEAMRSNKRHRPIGIGVQGLADVFMMMGIPFTC 528
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD---R 597
+A+ +NK IFETIYY AL S +LA +DGPY TY GSP+SKG+LQ DMW + D
Sbjct: 529 GKARDMNKMIFETIYYAALDESCKLAQRDGPYPTYEGSPVSKGLLQFDMWGLKREDLSGM 588
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+ LR I ++GVRNSLLV+PMPTAST+QILGN E EP +SN+Y RRVLSGEF VVN
Sbjct: 589 WDWNELRLRIQRHGVRNSLLVSPMPTASTAQILGNTESIEPLSSNLYQRRVLSGEFQVVN 648
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
+HL++ L LGLW+ ++T++I GSV I PE LK IYKT +EI QK L+ MAA+R
Sbjct: 649 RHLVEALERLGLWNDNMRTQLIVHKGSVQNIEGFPEHLKPIYKTAYEISQKDLITMAAER 708
Query: 718 GCYIDQSQSLNIHMEQPD----HGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDT 773
++DQSQSLN+ + + D KLT++H +AWS G+KTGMYYLRT+AA ++F+V
Sbjct: 709 APFVDQSQSLNLFLCEDDPKLKMKKLTAMHLHAWSSGLKTGMYYLRTKAAVAPVQFSVAP 768
Query: 774 SVLNNEKANRADNDVEANLAQ----VVCSLKNQEECMACGS 810
V R D A Q VVC N+E C C S
Sbjct: 769 EVSAEASRKRRAEDGSAFSKQPKLEVVC---NEEVCTMCSS 806
>gi|68629683|gb|AAY99446.1| ribonucleotide reductase [Cyprinid herpesvirus 3]
Length = 806
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/821 (53%), Positives = 573/821 (69%), Gaps = 30/821 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV KRDG KEP+ K+ R+ + G E DP L+AQK+ G+ G T+++DEL
Sbjct: 5 IYVTKRDGTKEPLDMAKVVERINEC--GFRSESVDPQLLAQKIEPGIGNGCKTSEIDELL 62
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A TA+ MT HPDY+ LA R+AV+NLHK+T FSE K ++ N +G +A L+A
Sbjct: 63 AHTASNMTTTHPDYSKLAARIAVTNLHKLTSPKFSEVCKRLWFNVNPDTGLRAPLIAQKF 122
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE+ K+A LD A+ + DF + YFGFKTLERSY+LK +E PQH LMR ++ IH
Sbjct: 123 YEVSQKHAERLDAAVRHHADFGYSYFGFKTLERSYMLKGPEGPIETPQHTLMRCALQIHG 182
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D+ D+ L+TY +S +FTHA+PTLFN+ +P+PQLSSCFLL MK DS+EGI DT+K CA+
Sbjct: 183 DNXDALLQTYGFLSSRYFTHASPTLFNSCSPKPQLSSCFLLNMKSDSMEGIADTIKSCAL 242
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGG+G+SI N+R G+YI GTNG SNGIVP L++FN R VDQGG KR GA A+Y
Sbjct: 243 ISKHAGGLGMSISNLRGKGAYIKGTNGHSNGIVPTLRIFNALERMVDQGGNKRPGALAVY 302
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH D+F+FL+LRKN G +E R RDLF ALW+PDLFM+RV+D G+WSL CP+ GL
Sbjct: 303 MEPWHVDVFDFLELRKNTGSDEQRTRDLFQALWIPDLFMQRVKDGGEWSLMCPASCPGLD 362
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY++YE EG+A+ + AR LW +L +Q+ETG P+ML+KD+CN KSN Q+L
Sbjct: 363 EVWGPEFEALYTRYEAEGKARRTVKARDLWNSVLVAQLETGGPFMLYKDACNAKSNHQHL 422
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIV++++ EE AVCNLAS+AL +VR + + D +
Sbjct: 423 GTIKCSNLCTEIVQYTNSEEVAVCNLASVALNEFVR------------ITIAEDPYE--Y 468
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF+ LA+V ++IT NLNK+ID N YP+ RSN RHRPIGIG+QGLAD F+++G+PF
Sbjct: 469 DFQLLADVVRMITRNLNKVIDGNFYPVPEAMRSNKRHRPIGIGVQGLADVFMMMGIPFTC 528
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD---R 597
+A+ +NK IFETIYY AL S +LA +DGPY TY GSP+SKG+LQ DMW + D
Sbjct: 529 GKARDMNKMIFETIYYAALDESCKLAQRDGPYPTYEGSPVSKGLLQFDMWGLKREDLSGM 588
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
WDW+ LR I ++GVRNSLLV+PMPTAST+QILGN E EP +SN+Y RRVLSGEF VVN
Sbjct: 589 WDWNELRLRIQRHGVRNSLLVSPMPTASTAQILGNTESIEPLSSNLYQRRVLSGEFQVVN 648
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
+HL++ L LGLW+ ++T++I GSV I PE LK IYKT +EI QK L+ MAA+R
Sbjct: 649 RHLVEALERLGLWNDNMRTQLIVHKGSVQNIEGFPEHLKPIYKTAYEISQKDLITMAAER 708
Query: 718 GCYIDQSQSLNIHMEQPD----HGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDT 773
++DQSQSLN+ + + D KLT++H +AWS G+KTGMYYLRT+AA ++F+V
Sbjct: 709 APFVDQSQSLNLFLCEDDPKLKMKKLTAMHLHAWSSGLKTGMYYLRTKAAVAPVQFSVAP 768
Query: 774 SVLNNEKANRADNDVEANLAQ----VVCSLKNQEECMACGS 810
V R D A Q VVC N+E C C S
Sbjct: 769 EVSAEASRKRRAEDGSAFSKQPKLEVVC---NEEVCTMCSS 806
>gi|350532635|ref|ZP_08911576.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
rotiferianus DAT722]
Length = 752
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/771 (56%), Positives = 557/771 (72%), Gaps = 33/771 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDGRKE DK+T R + L+ GL E P+ VAQ+V +G+Y G+ T++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEALADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++ HPDYA LA RV VS+L K T + T R + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETSGYATAT----------RELSEIGILSDTY 107
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ + KN L+ I Y RD+ FDYFG+KTLERSYLLK+ VVERPQ M MRV+V +
Sbjct: 108 VDFVAKNQFALEDMIDYKRDYQFDYFGYKTLERSYLLKVKGVVVERPQDMYMRVAVAVAG 167
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + + Y L+S ++THATPTLFNAG QLSSCFLL M++DSI GIYDTLK CA+
Sbjct: 168 DDLEEIRELYDLLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCAL 227
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIRA+G+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FA+Y
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI FLDLRKN GKEE RARDLF ALWVPDLFMERV +D +W+LF P + GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLS 347
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF Y +YE G I AR+L +I+ SQ ETGTPYML+KD+CN KSNQ+NL
Sbjct: 348 DLYGAEFTQKYQEYERMGLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EI+E S+P+ETA CNLAS+ALP++V + G F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASMALPKFVTDTG--------------------F 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +VTK+ +NL+++IDVN++P + +SN HRP+G+GIQGLAD F + LPF+S
Sbjct: 448 DFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA QLN+DI ET+Y+ +L+AS E+A + G Y +Y GSP+S G Q D+W+ PS RWDW
Sbjct: 508 EEALQLNRDIAETMYHASLEASCEIAAQKGAYSSYDGSPISHGQFQFDLWDEQPSSRWDW 567
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S L+ I+++GVRNSLL+A MPTAST+QILGNNE FE TSNIY R+ LSGEFI++NKHL
Sbjct: 568 SQLKRQIAEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHL 627
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+ DL + GLW+ ++ II NGSV I IP++L+++Y+TVWEI QK ++DM+A R +
Sbjct: 628 VSDLEQRGLWTSKIRDAIILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPF 687
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
+ QSQSLN+ + P ++ ++HFYAW +G+KTGMYYLR++ + +A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 738
>gi|68490738|ref|XP_710811.1| hypothetical protein CaO19.13267 [Candida albicans SC5314]
gi|68490761|ref|XP_710800.1| hypothetical protein CaO19.5845 [Candida albicans SC5314]
gi|46432045|gb|EAK91552.1| hypothetical protein CaO19.5845 [Candida albicans SC5314]
gi|46432057|gb|EAK91563.1| hypothetical protein CaO19.13267 [Candida albicans SC5314]
Length = 816
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/765 (56%), Positives = 564/765 (73%), Gaps = 20/765 (2%)
Query: 8 GRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAM 67
G +E KI L+++S+ L D ++ + V G+ +T +L AE A+
Sbjct: 9 GEEEDFDSVKIHKLLEEVSFNLGDLDLDQIV--ESVQRGLPSSLTIEELYTFIAEVIASR 66
Query: 68 TVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKN 127
+ HPDYA+LAGR+ L+ SFSE ++ + Y ++S S ++ Y+++ K+
Sbjct: 67 VIYHPDYAILAGRIETRKLYLKVPYSFSENVERLRKYRPRKSNS-YSPISSAFYKVVKKH 125
Query: 128 AACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSAL 187
LD I RD++ YFG KTLE SYLLK+D V E PQ++ MRV++GIH++D ++
Sbjct: 126 GEFLDKVIDKTRDYNLTYFGIKTLESSYLLKIDGEVAELPQYLFMRVAIGIHQNDINAIA 185
Query: 188 KTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGG 247
+TY LMSQ +F HA+PTL+NAG+ LSSCFL+ MKDDSI+GI+ TL + A+ISK++GG
Sbjct: 186 ETYDLMSQKYFIHASPTLYNAGSEFNYLSSCFLVAMKDDSIDGIFKTLNEAALISKASGG 245
Query: 248 IGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHAD 307
IG+ +HNIR++GSYI TNG+SNG+VPML+V+N+TARYVDQGGGKR GAFAIY+EPWH D
Sbjct: 246 IGIHVHNIRSNGSYIASTNGNSNGLVPMLRVYNNTARYVDQGGGKRPGAFAIYIEPWHGD 305
Query: 308 IFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEF 367
IF+ L++RKN G EE R RDLFY LW+PDLFM+RV+++ W+LF P++A GL+D +G EF
Sbjct: 306 IFDILEMRKNHGNEEMRTRDLFYGLWIPDLFMKRVKENSDWTLFSPNEAVGLSDVYGEEF 365
Query: 368 EHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSN 427
E LY +YE EG V SA KLW IL+SQ ETG PYML+KD+CN KSNQ+N+GTIKSSN
Sbjct: 366 EKLYCKYESEGFGTKV-SAHKLWLAILHSQTETGGPYMLYKDACNTKSNQKNIGTIKSSN 424
Query: 428 LCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAE 487
LC EIVE+SSP+ETAVCNLAS+ALP Y++ +G FDFE+L
Sbjct: 425 LCCEIVEYSSPKETAVCNLASLALPTYLK--------TTEDAIG--------FDFEKLHS 468
Query: 488 VTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLN 547
VTK++T NLN++IDV YP+ET SN RHRPI +G+QGLAD F L LPF+S A+ LN
Sbjct: 469 VTKVLTRNLNRVIDVTKYPVETAEYSNKRHRPIALGVQGLADLFAELRLPFDSAMAKTLN 528
Query: 548 KDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMI 607
IFETIY+ AL+AS ELA+K+GPYET+ GSP SKGILQ DMW PS +DW +L++ I
Sbjct: 529 IQIFETIYHAALEASVELAMKEGPYETFQGSPASKGILQFDMWKHKPSPMYDWHALKDNI 588
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTEL 667
G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y RRVL+GE+ +VNK+L+KDL +L
Sbjct: 589 QNFGLRNSLLVAPMPTASTSQILGFNECFEPYTSNLYNRRVLAGEYQIVNKYLIKDLMDL 648
Query: 668 GLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSL 727
G+W A++ KII ENGS+ I IP+E+K +YKTVWE+ QK ++DMAADRG ++DQSQS+
Sbjct: 649 GIWDSAMRNKIIMENGSIQNIPNIPDEIKQLYKTVWELSQKVIIDMAADRGKFVDQSQSM 708
Query: 728 NIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
NIH+ P GKLTS HFYAW KG+KTGMYYLRT+AA+ AI+FTVD
Sbjct: 709 NIHLRNPTIGKLTSCHFYAWEKGLKTGMYYLRTQAASRAIQFTVD 753
>gi|424046201|ref|ZP_17783764.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-03]
gi|408885458|gb|EKM24175.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-03]
Length = 752
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/771 (56%), Positives = 556/771 (72%), Gaps = 33/771 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDGRKE DK+T R + L+ GL E P+ VAQ V +G+Y G+ T++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEALADGLKVE---PIAVAQHVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++ HPDYA LA RV VS+L K T + T R + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETSGYATAT----------RELSEIGILSDAY 107
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ + KN L+ I Y RD+ FDYFG+KTLERSYLLK+ VVERPQ M MRV+V +
Sbjct: 108 VDFVAKNQFALEEMIDYKRDYQFDYFGYKTLERSYLLKVKRVVVERPQDMFMRVAVAVAG 167
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + + Y L+S ++THATPTLFNAG QLSSCFLL M++DSI GIYDTLK CA+
Sbjct: 168 DDLEEIRELYDLLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCAL 227
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIRA+G+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FA+Y
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI FLDLRKN GKEE RARDLF ALWVPDLFMERV +D +W+LF P + GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLS 347
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF Y +YE G I AR+L +I+ SQ ETGTPYML+KD+CN KSNQ+NL
Sbjct: 348 DLYGTEFTQKYQEYERMGLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EI+E S+P+ETA CNLAS+ALP++V + G F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASMALPKFVTDTG--------------------F 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +VTK+ +NL+++IDVN++P + +SN HRP+G+GIQGLAD F + LPF+S
Sbjct: 448 DFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA QLN+DI ET+Y+ +L+AS E+A + G Y +Y GSP+S G LQ D+W PS RWDW
Sbjct: 508 EEALQLNRDIAETMYHASLEASCEIAAQKGAYSSYDGSPISHGQLQFDLWGEQPSSRWDW 567
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S L+ I+++GVRNSLL+A MPTAST+QILGNNE FE TSNIY R+ LSGEFI++NKHL
Sbjct: 568 SQLKRQIAEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHL 627
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+ DL + GLW+ ++ II NGSV I IP++L+++Y+TVWEI QK ++DM+A R +
Sbjct: 628 VSDLEQRGLWTSKIRDAIILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPF 687
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
+ QSQSLN+ + P ++ ++HFYAW +G+KTGMYYLR++ + +A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 738
>gi|313768128|ref|YP_004061559.1| hypothetical protein BpV1_129c [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599735|gb|ADQ91756.1| hypothetical protein BpV1_129c [Bathycoccus sp. RCC1105 virus BpV1]
Length = 748
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/774 (56%), Positives = 568/774 (73%), Gaps = 36/774 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR GR E V+FD +T R+ KL+ GLS E D +AQ+V + +Y G+ T ++D L+
Sbjct: 1 MRVTKRSGRVEDVKFDNVTNRISKLTEGLS-ETVDVTKIAQQVFSSIYDGIKTPEIDTLS 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE M + PDY +LA R+ SN+ K N+F ++ ++ KA +V +V
Sbjct: 60 AEICIGMITSDPDYEILATRITASNIQKRAANNFHIAMRKLH---------KAGIVTHEV 110
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
E+ K + I +RDF+F YFG KTLE+ YL K+D ++E PQ++ MRV++GIH
Sbjct: 111 LEVSSK----VKDDIKPERDFEFGYFGLKTLEKGYLQKIDGEIIETPQYLYMRVAIGIHG 166
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D L+TY +S+ F HATPTLFNAGTP+PQ+SSCFL+ K+DSI+GIYDT+K+CA
Sbjct: 167 HDIDHVLETYEALSKGLFIHATPTLFNAGTPRPQMSSCFLIANKEDSIDGIYDTVKECAR 226
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL +H++RA+ S+I GTNG+S+GI+PML+V+N TARYV+Q G +RKG+ A+Y
Sbjct: 227 ISKWAGGIGLHVHDVRANKSHIRGTNGTSDGIIPMLRVYNSTARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI +FL++R NQG EE R RDLF A+W+PDLFM+RV DG WSLFCP A GL+
Sbjct: 286 LEPWHADILDFLEIRLNQGDEEARCRDLFSAMWIPDLFMKRVESDGNWSLFCPDQAKGLS 345
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE EG A V+ A ++W I+ SQ ETGTPYML+KD+CN KSN +++
Sbjct: 346 DVYGKEFEDLYEKYESEGIATKVVPASEIWKAIIKSQSETGTPYMLYKDACNEKSNHKHV 405
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEI+EF+ EETAVCNLASIALP+YV D + F
Sbjct: 406 GTIKSSNLCTEILEFTDKEETAVCNLASIALPKYV------------------DVEKNEF 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ E L VTK++T NLNK+ID N YP E +RSN+RHRPIGIG+QGLAD FI+L + F S
Sbjct: 448 NHEELHRVTKMVTRNLNKVIDKNFYPTENGKRSNMRHRPIGIGVQGLADVFIMLRMTFGS 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP--SDRW 598
E+++LN DIFETIY+ +L++S ELA GPYET+ GSP SKGILQ DMW+ P S R+
Sbjct: 508 EESRKLNIDIFETIYHASLESSCELAEMYGPYETFKGSPFSKGILQFDMWDRDPKFSGRY 567
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
DW+++R+++ K G NSLL+APMPTASTSQILGNNECFEPYT+NIY RR L+GEF+VVNK
Sbjct: 568 DWNAMRKLV-KKGTMNSLLLAPMPTASTSQILGNNECFEPYTTNIYLRRTLAGEFVVVNK 626
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
HL+ DL E GLWS +K ++ NGSV I +IP++LK +YKTVWE+ QKT++DMAADRG
Sbjct: 627 HLVNDLKERGLWSKEMKDLMVKANGSVQNIIDIPDDLKELYKTVWEMSQKTIIDMAADRG 686
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
YIDQSQS+N+ +E P KL+S+H YAW G+KTGMYYLR++A + I+F+++
Sbjct: 687 VYIDQSQSMNLFVESPTISKLSSMHMYAWKTGLKTGMYYLRSKAKSRPIQFSLE 740
>gi|269963258|ref|ZP_06177591.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832006|gb|EEZ86132.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 752
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/771 (56%), Positives = 556/771 (72%), Gaps = 33/771 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDGRKE DK+T R + L+ GL E P+ VAQ+V +G+Y G+ T++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEALADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++ HPDYA LA RV VS+L K T + T R + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETSGYATAT----------RELSEIGILSDTY 107
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ KN L+ I Y RD+ FDYFG+KTLERSYLLK+ VVERPQ M MRV+V +
Sbjct: 108 VDFAAKNQFALEEMIDYKRDYQFDYFGYKTLERSYLLKVKGVVVERPQDMFMRVAVAVAG 167
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + + Y L+S ++THATPTLFNAG QLSSCFLL M++DSI GIYDTLK CA+
Sbjct: 168 DDLEEIRELYDLLSHGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCAL 227
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIRA+G+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FA+Y
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI FLDLRKN GKEE RARDLF ALWVPDLFMERV +D +W+LF P + GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLS 347
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF Y +YE G I AR+L +I+ SQ ETGTPYML+KD+CN KSNQ+NL
Sbjct: 348 DLYGAEFTQKYQEYERMGLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EI+E S+P+ETA CNLAS+ALP++V + G F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASMALPKFVTDSG--------------------F 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +VTK+ +NL+++IDVN++P + +SN HRP+G+GIQGLAD F + LPF+S
Sbjct: 448 DFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA QLN+DI ET+Y+ +L+AS E+A + G Y +Y GSP+S G Q D+W+ PS RWDW
Sbjct: 508 EEALQLNRDIAETMYHASLEASCEIAAQKGAYSSYDGSPISHGQFQFDLWDEQPSSRWDW 567
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S L+ I+++GVRNSLL+A MPTAST+QILGNNE FE TSNIY R+ LSGEFI++NKHL
Sbjct: 568 SQLKRQIAEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHL 627
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+ DL + GLW+ ++ II NGSV I IP++L+++Y+TVWEI QK ++DM+A R +
Sbjct: 628 VSDLEQRGLWTSKIRDAIILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPF 687
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
+ QSQSLN+ + P ++ ++HFYAW +G+KTGMYYLR++ + +A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 738
>gi|165969145|ref|YP_001651045.1| ribonucleotide reductase small subunit 1 [Orgyia leucostigma NPV]
gi|164663641|gb|ABY65861.1| ribonucleotide reductase small subunit 1 [Orgyia leucostigma NPV]
Length = 761
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/772 (54%), Positives = 566/772 (73%), Gaps = 30/772 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YVIKRDG K+ V DKIT++L +LSYGL+K+ DP + +V +Y GVTTT+LD+ A
Sbjct: 9 LYVIKRDGSKQTVLLDKITSKLNRLSYGLNKQFIDPAAITIQVVKTIYAGVTTTELDQHA 68
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+ A M H DYALLAGR+ V + HK +SF + +Y K +LV+ +
Sbjct: 69 AKETANMAYIHDDYALLAGRIMVDDNHKHVPDSFVRVVAKLY---------KHNLVSLAL 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+E+ NA L+ I Y RD+++ YF +KTLE YL +++ RV ER QHMLMRV++GIH
Sbjct: 120 FEVASANADALEAQIDYKRDYEYKYFAYKTLENGYLKRINGRVAERIQHMLMRVAIGIHG 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D+A++TY+L + FTHA+PTLF AG PQPQLSSCFLL +K+DSI+G+Y+TL CA
Sbjct: 180 RDIDAAIETYNLTANKMFTHASPTLFAAGCPQPQLSSCFLLTLKEDSIKGMYETLADCAQ 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK GG+G+++H RA GS I GTNG+++G+ P+L+V+N+ R+VDQGG KRKGA A+Y
Sbjct: 240 ISKYGGGLGVNVHKARARGSAIRGTNGTASGVEPLLRVYNNCVRHVDQGG-KRKGAMAVY 298
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI++FL+L++N G E+ +ARDL YALWVPDLFM+RV+ + WSL CP GL+
Sbjct: 299 LEPWHADIYDFLNLKRNMGAEDKKARDLLYALWVPDLFMKRVQQNEMWSLMCPDRCPGLS 358
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D + +EFE LY QYE E R + AR L+ I+ +Q+ETGTPY+L+KD+CN KSNQ+NL
Sbjct: 359 DVYSLEFEKLYEQYESENRFTCQVEARSLFRTIIETQVETGTPYILYKDACNIKSNQKNL 418
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+ SNLC EIV++SS EE AVCNLAS+ + R++ K+ +F
Sbjct: 419 GTIRCSNLCAEIVQYSSSEEIAVCNLASVCVNRFI--------------------KSGVF 458
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF L VTKI+ +NLNKIID+N+YP+E + SNL+HRP+G+GIQGLAD F +LGLP+ES
Sbjct: 459 DFVALKSVTKIVVKNLNKIIDINYYPLEAAKESNLKHRPVGVGIQGLADAFCILGLPYES 518
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
+A+ LNK I ET+YY AL+AS +LA +GPY +Y SP S G+LQ DMWN+ P++ W+W
Sbjct: 519 DKAKMLNKQIAETVYYAALEASCDLAKLNGPYSSYSDSPASLGVLQYDMWNVQPTNLWNW 578
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ L+ I+K+G+RNSLLVA MPTA+T+QILGNNE FEP+TSN+Y RRVL+G+F V+N+HL
Sbjct: 579 ADLKLRIAKHGLRNSLLVAYMPTATTAQILGNNESFEPFTSNLYVRRVLAGDFQVINQHL 638
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
++DL L L+ ++ II GSV KI IP+++KA+YKTVWE+ K L+DMAADRG +
Sbjct: 639 VEDLCRLNLYDDHMRNSIIAAGGSVQKIDRIPDDIKAVYKTVWEMSSKNLIDMAADRGAF 698
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
IDQSQS N+ + QP LTS+H + W +G+KTGMYYLRT+ AADAI FTVD
Sbjct: 699 IDQSQSFNVFIAQPSFALLTSVHMHTWKRGLKTGMYYLRTKPAADAIAFTVD 750
>gi|424032642|ref|ZP_17772059.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-01]
gi|408875700|gb|EKM14844.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-01]
Length = 752
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/771 (56%), Positives = 556/771 (72%), Gaps = 33/771 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDGRKE DK+T R + L+ GL E P+ VAQ+V +G+Y G+ T++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEALADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++ HPDYA LA RV VS+L K T + T R + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETSGYATAT----------RELSEIGILSDIY 107
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ + KN L+ I Y RD+ FDYFG+KTLERSYLLK+ VVERPQ M MRV+V +
Sbjct: 108 VDFVAKNQFALEDMIDYKRDYQFDYFGYKTLERSYLLKVKGVVVERPQDMFMRVAVAVAG 167
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + + Y L+S ++THATPTLFNAG QLSSCFLL M++DSI GIYDTLK CA+
Sbjct: 168 DDLEEIRELYDLLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCAL 227
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIRA+G+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FA+Y
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI FLDLRKN GKEE RARDLF ALWVPDLFMERV +D +W+LF P + GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLS 347
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF Y +YE G I AR+L +I+ SQ ETGTPYML+KD+CN KSNQ+NL
Sbjct: 348 DLYGAEFTQKYQEYERMGLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EI+E S+P+ETA CNLAS+ALP++V + G F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASMALPKFVTDTG--------------------F 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +VTK+ +NL+++IDVN++P + +SN HRP+G+GIQGLAD F + LPF+S
Sbjct: 448 DFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA QLN+DI ET+Y+ +L+AS E+A + G Y +Y GSP+S G Q D+W+ PS RWDW
Sbjct: 508 EEALQLNRDIAETMYHASLEASCEIAAQKGAYSSYDGSPISHGQFQFDLWDEQPSSRWDW 567
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S L+ I ++GVRNSLL+A MPTAST+QILGNNE FE TSNIY R+ LSGEFI++NKHL
Sbjct: 568 SQLKRQIVEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHL 627
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+ DL + GLW+ ++ II NGSV I IP++L+++Y+TVWEI QK ++DM+A R +
Sbjct: 628 VSDLEQRGLWTSKIRDAIILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPF 687
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
+ QSQSLN+ + P ++ ++HFYAW +G+KTGMYYLR++ + +A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 738
>gi|444425041|ref|ZP_21220489.1| ribonucleoside-diphosphate reductase subunit alpha [Vibrio
campbellii CAIM 519 = NBRC 15631]
gi|444241651|gb|ELU53172.1| ribonucleoside-diphosphate reductase subunit alpha [Vibrio
campbellii CAIM 519 = NBRC 15631]
Length = 752
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/771 (55%), Positives = 556/771 (72%), Gaps = 33/771 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDGRKE DK+T R + L+ GL E P+ VAQ+V +G+Y G+ T++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEALADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++ HPDYA LA RV VS+L K T + T R + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETSGYATAT----------RELSEIGILSDAY 107
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ + KN L+ I Y RD+ FDYFG+KTLERSYLLK+ VVERPQ M MRV+V +
Sbjct: 108 VDFVAKNQFALEEMIDYKRDYQFDYFGYKTLERSYLLKVKGVVVERPQDMFMRVAVAVAG 167
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + + Y L+S ++THATPTLFNAG QLSSCFLL M++DSI GIYDTLK CA+
Sbjct: 168 DDLEEIRELYDLLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCAL 227
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIRA+G+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FA+Y
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI FLDLRKN GKEE RARDLF ALWVPDLFMERV +D +W+LF P + GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLS 347
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF Y +YE G I AR+L +I+ SQ ETGTPYML+KD+CN KSNQ+NL
Sbjct: 348 DLYGAEFTQKYQEYERMGLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EI+E S+P+ETA CNLAS+ALP++V + G F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASMALPKFVTDAG--------------------F 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L +VTK+ +NL+++IDVN++P + +SN HRP+G+GIQGLAD F + PF+S
Sbjct: 448 DFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHFPFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA QLN+DI ET+Y+ +L+AS E+A + G Y +Y GSP+S G Q D+W+ PS RWDW
Sbjct: 508 EEALQLNRDIAETMYHASLEASCEIAAQKGAYSSYDGSPISHGQFQFDLWDEQPSSRWDW 567
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S L+ I+++GVRNSLL+A MPTAST+QILGNNE FE TSNIY R+ LSGEFI++NKHL
Sbjct: 568 SQLKRQIAEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHL 627
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+ DL + GLW+ ++ II NGSV I IP++L+++Y+TVWEI QK ++DM+A R +
Sbjct: 628 VSDLEQRGLWTSKIRDAIILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPF 687
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
+ QSQSLN+ + P ++ ++HFYAW +G+KTGMYYLR++ + +A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 738
>gi|327287998|ref|XP_003228715.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Anolis carolinensis]
Length = 745
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/814 (56%), Positives = 582/814 (71%), Gaps = 73/814 (8%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGR E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVVKRDGRHERVMFDKITSRIQKLCYGLNVDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+Y Y N + K + ++A +
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYTYVNPHNSKHSPMIAKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++S+V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINSKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLLCMKDDSIEGIYDTLK CA+
Sbjct: 181 NDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKHCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKSAGGIGLAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL
Sbjct: 301 LEPWHFDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E V N + R G+ VQ + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSNDEAEVSN-------KRHRPIGIGVQGLADAFILMR------F 467
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
FE + LN+ I Y NL + G P+E+
Sbjct: 468 PFESPE------AQLLNQQIFETIYYAALEASCNLA-KECG---------------PYET 505
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
E L+K I + Y+ + ++ D+W DW
Sbjct: 506 YEGCPLSKGILQ-------------------YDMW-------NVVPTDLW--------DW 531
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+E I+K+GVRNSLLVAPMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 532 KALKEKIAKHGVRNSLLVAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 591
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAADRG +
Sbjct: 592 LKDLTERGLWNEEMKNQIIACNGSIQTIPEIPDDLKLLYKTVWEISQKTVLKMAADRGAF 651
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRT+ AA+ I+FT++ LN EK
Sbjct: 652 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLNKEK 711
Query: 781 AN----RADNDVEANLAQVVCSLKNQEECMACGS 810
++ + E N A +VCSL+N++EC+ CGS
Sbjct: 712 SSIGEEEEEAKKERNKAAMVCSLENRDECLMCGS 745
>gi|224001624|ref|XP_002290484.1| ribonucleoside reductase [Thalassiosira pseudonana CCMP1335]
gi|220973906|gb|EED92236.1| ribonucleoside reductase [Thalassiosira pseudonana CCMP1335]
Length = 811
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/835 (53%), Positives = 599/835 (71%), Gaps = 49/835 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV K+DGR E + +KI RL+ LS LS + +A + G Y + T ++D LA
Sbjct: 1 MYVTKKDGRLELLDKNKILQRLQSLSTNLSTPYLSLPTLATSILHGTYPNLPTREIDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
+ETAA+M+ HPDY LA R+ S HK T +SFS+ + + N+ G V +++
Sbjct: 61 SETAASMSTQHPDYGRLAARICASANHKSTPDSFSKAMLLL----NEEGG---GFVNNEI 113
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM-DSRVVERPQHMLMRVSVGIH 179
+++ + +D I ++RDF+ YFG+KTLERSYLLK+ + +VER Q++ MRV++GIH
Sbjct: 114 ADLVKRRGKEIDDRIKHERDFEMTYFGYKTLERSYLLKLNEDTIVERIQYLWMRVALGIH 173
Query: 180 -KDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
+ +A +TY LMS+ +FTHA+PTLF+AGT PQLSSCFL+ M DDSI GIYDTLK+C
Sbjct: 174 CYANLQAAFETYDLMSRGYFTHASPTLFHAGTTHPQLSSCFLVQMSDDSINGIYDTLKRC 233
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIGL +H IRA G++I GT G SNG+VPML+VF+ T+ YVDQGGGKR GAFA
Sbjct: 234 AVISKAAGGIGLCVHKIRARGTFIKGTRGVSNGLVPMLRVFDVTSHYVDQGGGKRPGAFA 293
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
IYLEPWHADIF+ L+L+KN GKEE RAR+LFY LWVPDLFM+RV +DG WSL CP G
Sbjct: 294 IYLEPWHADIFDVLNLKKNHGKEEQRARNLFYGLWVPDLFMKRVEEDGVWSLMCPHRCPG 353
Query: 359 LADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQ 418
L++ G +FE LY++YE +GR + AR+LW IL +QIETGTPY+L+KD+ N+KSNQQ
Sbjct: 354 LSECHGEKFEELYAKYESDGRYTRQVRARELWAAILEAQIETGTPYLLYKDAANKKSNQQ 413
Query: 419 NLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNR 478
NLGTI+ SNLCTEI+++++ EE AVCNLASI LP++V V + N GS +
Sbjct: 414 NLGTIQCSNLCTEIIQYTNEEEVAVCNLASICLPKFV----VSDRGN----FGSTEGSGA 465
Query: 479 LFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
FD E+L +V KI+T+NL+K+IDVN YPIE ++SN HRP+GIG+ GLADTF+ LGLPF
Sbjct: 466 YFDHEQLHKVAKIVTKNLDKVIDVNQYPIEGAKKSNRSHRPVGIGVSGLADTFLRLGLPF 525
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI----TP 594
S EA+ LN+ IFETIY+ +L+AS E+A + G YET+ GSP S+G LQ ++W + TP
Sbjct: 526 ASEEAKTLNEAIFETIYHASLEASNEIAREKGSYETFAGSPASEGKLQFNLWGVDDVETP 585
Query: 595 SDR-------------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
S R +DW +LR+ I + G+RNSLLVAPMPTASTSQILG NEC
Sbjct: 586 SHRKDQSALAFQKYSTQVNGGGYDWETLRQNIIEGGLRNSLLVAPMPTASTSQILGVNEC 645
Query: 636 FEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEEL 695
FEP+ SN+Y RRV +GEFI+VN HL++DLT+LGLW+ +++ +++ + GSV+KI +P+ L
Sbjct: 646 FEPFASNLYVRRVKAGEFIIVNPHLIQDLTDLGLWNQSVRNQLMRDGGSVAKIECVPDRL 705
Query: 696 KAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
K +YKTVWE+K K ++DMAADRG +IDQSQSLN+ + P KLT++HFYAW KG+KTG+
Sbjct: 706 KGLYKTVWEMKMKDVIDMAADRGKFIDQSQSLNLFIADPTVDKLTAMHFYAWKKGLKTGI 765
Query: 756 YYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
YYLRTR A +AI++TV+ L +V+A+ Q + +L + E C++C +
Sbjct: 766 YYLRTRPAVNAIQYTVEKDAL---------PEVDASPQQNIPTLDDSETCLSCSA 811
>gi|228861716|ref|YP_002854736.1| Rr1 [Euproctis pseudoconspersa nucleopolyhedrovirus]
gi|226425164|gb|ACO53576.1| Rr1 [Euproctis pseudoconspersa nucleopolyhedrovirus]
Length = 769
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/786 (53%), Positives = 570/786 (72%), Gaps = 30/786 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV KR+G+KE + DKIT++L++LSY L+ E+ DP + +V +Y GV+T +LD A
Sbjct: 8 LYVTKRNGKKEALHLDKITSKLQRLSYNLNSEYIDPASITLQVVKTIYPGVSTEELDMHA 67
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A A M H DYALLAGR+ V NLHK + SF ++ ++ + +LV+D++
Sbjct: 68 ARETANMAYVHHDYALLAGRIMVDNLHKNVEASFERVVERLHRH---------NLVSDEL 118
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
I+ NA L+ I + D+++ YFG+KTLE YL K++ +V ER QHMLMRV++G+H
Sbjct: 119 LSIVQDNAITLESRINHSLDYEYKYFGYKTLENGYLKKIEEKVAERIQHMLMRVAIGVHG 178
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++A +TY LMSQ +FTHA+PTLF AGT PQLSSCFLL +++DSI GIY+TL+ CA+
Sbjct: 179 RDIENATETYDLMSQKFFTHASPTLFAAGTKLPQLSSCFLLTLREDSITGIYETLRDCAL 238
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK GGIG+++H++R GS I T+G ++G+ ML+V+N+ R+VDQGG KRKGA AIY
Sbjct: 239 ISKFGGGIGVNVHDVRGRGSRIRSTDGIASGLESMLRVYNNAVRHVDQGG-KRKGAMAIY 297
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+++FL+L++N G EE +ARDL YALWVPDLFM RV+DDG WSL CP GL+
Sbjct: 298 LEPWHVDVYDFLNLKRNMGAEEKKARDLLYALWVPDLFMRRVKDDGVWSLMCPDRCPGLS 357
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G +F+ LY+QYE EG+ + AR L+ I+ +Q+ETGTPYML+KD+CNRK+NQ NL
Sbjct: 358 DVYGNQFDELYAQYEREGKQVSQVPARDLFKFIIETQVETGTPYMLYKDACNRKTNQSNL 417
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLC+EI+E+S ++ AVCNLASI + R V +N F
Sbjct: 418 GTIKCSNLCSEIIEYSDADQVAVCNLASICVNRCV--------------------ENGAF 457
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F+ L +TK + +NLNKIIDVN YP+E R SNL+HRP+G+GIQGLAD F++L +P+ES
Sbjct: 458 NFQTLKRITKTVVKNLNKIIDVNFYPLEEARLSNLKHRPVGVGIQGLADAFVMLRMPYES 517
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN I ETIYY AL+AS ELA G YE+Y GSP S+GILQ DMWN TP++ WDW
Sbjct: 518 DEAKLLNTQIAETIYYGALEASCELAKIHGAYESYAGSPASRGILQYDMWNATPTNLWDW 577
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S L++ IS +G+RNSLLVA MPTA+T+QILGNNE FEP+T+N+Y RRVL+G+F V+N HL
Sbjct: 578 SVLKQRISTHGLRNSLLVAYMPTATTAQILGNNESFEPFTNNLYVRRVLAGDFQVINHHL 637
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+ DL L L+ ++ +II GSV +I+ IPE +K +YKTVWE+K K L++MA DRG Y
Sbjct: 638 VDDLVALNLYDENMRNEIIAAGGSVQRIASIPEHVKQLYKTVWEMKNKRLIEMAVDRGAY 697
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
DQSQS N+ + +P + ++TS+H +AWS G+KTGMYYLRT+ AADAI+FTVD S L +
Sbjct: 698 TDQSQSFNVFVAEPTYARMTSIHMHAWSSGLKTGMYYLRTKPAADAIQFTVDKSKLRRRQ 757
Query: 781 ANRADN 786
R N
Sbjct: 758 KARNVN 763
>gi|312599278|gb|ADQ91301.1| hypothetical protein BpV2_134c [Bathycoccus sp. RCC1105 virus BpV2]
Length = 748
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/774 (55%), Positives = 568/774 (73%), Gaps = 36/774 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR GR E V+FD +T R+ KL+ GLS E D +AQ+V + +Y G+ T ++D L+
Sbjct: 1 MRVTKRSGRVEDVKFDNVTNRISKLTEGLS-ETVDVTKIAQQVFSSIYDGIKTPEIDTLS 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE M + PDY +LA R+ SN+ K N+F ++ ++ KA +V +V
Sbjct: 60 AEICIGMITSDPDYEILATRITASNIQKRAANNFHIAMRKLH---------KAGIVTHEV 110
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
E+ K + I +RDF+F YFG KTLE+ YL K+D ++E PQ+M MRV++GIH
Sbjct: 111 LEVSSK----VKDDIKPERDFEFGYFGLKTLEKGYLQKIDGEIIETPQYMYMRVAIGIHG 166
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D D L+TY +S+ F HATPTLFNAGTP+PQ+SSCFL+ K+DSI+GIYDT+K+CA
Sbjct: 167 HDIDHVLETYEALSKGLFIHATPTLFNAGTPRPQMSSCFLISNKEDSIDGIYDTVKECAR 226
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGL IH++RA+ S+I GTNG+S+GI+PML+V+N TARYV+Q G +RKG+ A+Y
Sbjct: 227 ISKWAGGIGLHIHDVRANKSHIRGTNGTSDGIIPMLRVYNTTARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI +FL++R NQG EE R RDLF A+W+PDLFM+RV G WSLFCP A GL+
Sbjct: 286 LEPWHADILDFLEIRLNQGDEEARCRDLFSAMWIPDLFMKRVESGGNWSLFCPDVARGLS 345
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE +G A V+ A ++W I+ SQ ETGTPYML+KD+CN KSN +++
Sbjct: 346 DVYGKEFEELYEKYEADGIATKVVPASEVWKAIIKSQSETGTPYMLYKDACNEKSNHKHI 405
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLCTEIVE++ +ETAVCNLASIALP+YV D + + F
Sbjct: 406 GTIKSSNLCTEIVEYTDKDETAVCNLASIALPKYV------------------DVEKKEF 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ E L VTK++T NLNK+ID N YP E +RSN+RHRPIGIG+QGLAD FI+L + F S
Sbjct: 448 NHEELHRVTKMVTRNLNKVIDKNFYPTENGKRSNMRHRPIGIGVQGLADVFIMLRMTFGS 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP--SDRW 598
E+++LN DIFETIY+ +L++S ELA GPYE++ GSP SKGILQ DMW+ P S R+
Sbjct: 508 EESRKLNIDIFETIYHASLESSCELAEMYGPYESFKGSPFSKGILQFDMWDRDPKFSGRY 567
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
DW+++RE++ K G NSLL+APMPTASTSQILGNNECFEPYT+NIY RR L+GEF+VVNK
Sbjct: 568 DWNAMRELV-KKGTMNSLLLAPMPTASTSQILGNNECFEPYTTNIYLRRTLAGEFVVVNK 626
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
HL+ DL E GLWS +K ++ NGSV I +IP++LK +YKTVWE+ QKT++DMAADRG
Sbjct: 627 HLVNDLKERGLWSKEMKDLMVKANGSVQNIIDIPDDLKELYKTVWEMSQKTIIDMAADRG 686
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
YIDQSQS+N+ +E P KL+S+H YAW G+KTGMYYLR++A + I+F+++
Sbjct: 687 VYIDQSQSMNLFVESPTISKLSSMHMYAWKTGLKTGMYYLRSKAKSRPIQFSLE 740
>gi|62084010|emb|CAI72629.1| ribonucleotide reductase, large subunit [Euproctis pseudoconspersa
nucleopolyhedrovirus]
Length = 769
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/786 (53%), Positives = 570/786 (72%), Gaps = 30/786 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV KR+G+KE + DKIT++L++LSY L+ E+ DP + +V +Y GV+T +LD A
Sbjct: 8 LYVTKRNGKKEALHLDKITSKLQRLSYNLNSEYIDPASITLQVVKTIYPGVSTEELDMHA 67
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A A M H DYALLAGR+ V NLHK + SF ++ ++ + +LV+D++
Sbjct: 68 ARETANMAYVHHDYALLAGRIMVDNLHKNVEASFERVVERLHRH---------NLVSDEL 118
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
I+ NA L+ I + D+++ YFG+KTLE YL K++ ++ ER QHMLMRV++G+H
Sbjct: 119 LSIVQDNAITLESRINHSLDYEYKYFGYKTLENGYLKKIEEKIAERIQHMLMRVAIGVHG 178
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D ++A +TY LMSQ +FTHA+PTLF AGT PQLSSCFLL +++DSI GIY+TL+ CA+
Sbjct: 179 RDIENATETYDLMSQKFFTHASPTLFAAGTKLPQLSSCFLLTLREDSITGIYETLRDCAL 238
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK GGIG+++H++R GS I T+G ++G+ ML+V+N+ R+VDQGG KRKGA AIY
Sbjct: 239 ISKFGGGIGVNVHDVRGRGSRIRSTDGIASGLESMLRVYNNAVRHVDQGG-KRKGAMAIY 297
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH D+++FL+L++N G EE +ARDL YALWVPDLFM RV+DDG WSL CP GL+
Sbjct: 298 LEPWHVDVYDFLNLKRNMGAEEKKARDLLYALWVPDLFMRRVKDDGVWSLMCPDRCPGLS 357
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G +F+ LY+QYE EG+ + AR L+ I+ +Q+ETGTPYML+KD+CNRK+NQ NL
Sbjct: 358 DVYGNQFDELYAQYEREGKQVSQVPARDLFKFIIETQVETGTPYMLYKDACNRKTNQSNL 417
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLC+EI+E+S ++ AVCNLASI + R V +N F
Sbjct: 418 GTIKCSNLCSEIIEYSDADQVAVCNLASICVNRCV--------------------ENGAF 457
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+F+ L +TK + +NLNKIIDVN YP+E R SNL+HRP+G+GIQGLAD F++L +P+ES
Sbjct: 458 NFQTLKRITKTVVKNLNKIIDVNFYPLEEARLSNLKHRPVGVGIQGLADAFVMLRMPYES 517
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA+ LN I ETIYY AL+AS ELA G YE+Y GSP S+GILQ DMWN TP++ WDW
Sbjct: 518 DEAKLLNTQIAETIYYGALEASCELAKIHGAYESYAGSPASRGILQYDMWNATPTNLWDW 577
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S L++ IS +G+RNSLLVA MPTA+T+QILGNNE FEP+T+N+Y RRVL+G+F V+N HL
Sbjct: 578 SVLKQRISTHGLRNSLLVAYMPTATTAQILGNNESFEPFTNNLYVRRVLAGDFQVINHHL 637
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+ DL L L+ ++ +II GSV +I+ IPE +K +YKTVWE+K K L++MA DRG Y
Sbjct: 638 VDDLVALNLYDENMRNEIIAAGGSVQRIASIPEHVKQLYKTVWEMKNKRLIEMAVDRGAY 697
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
DQSQS N+ + +P + ++TS+H +AWS G+KTGMYYLRT+ AADAI+FTVD S L +
Sbjct: 698 TDQSQSFNVFVAEPTYARMTSIHMHAWSSGLKTGMYYLRTKPAADAIQFTVDKSKLRRRQ 757
Query: 781 ANRADN 786
R N
Sbjct: 758 KARNVN 763
>gi|448103839|ref|XP_004200138.1| Piso0_002711 [Millerozyma farinosa CBS 7064]
gi|359381560|emb|CCE82019.1| Piso0_002711 [Millerozyma farinosa CBS 7064]
Length = 856
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/795 (55%), Positives = 573/795 (72%), Gaps = 26/795 (3%)
Query: 3 VIKRDGRKEPVR----FDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDE 58
V+ R GR+E + DK++ L++L++ L ++ + L+ K+ G+ ++T ++
Sbjct: 5 VVVRAGREEIITEDFDRDKLSRFLQRLNFNLDSKYVNIELLVDKIVNGLPDRISTNEIYG 64
Query: 59 LAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
LA+ET A+ +NHPD+A+LAGRV + L K SFS+ ++ + + L +
Sbjct: 65 LASETIASNVINHPDHAILAGRVVAAKLQKEMGPSFSKNVEKIVAMNKEYQSTSKRLFSS 124
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + KN LD + + RDF+ YFG KTLE+SYLL + ++ E PQ + +RV++GI
Sbjct: 125 EFLSTVQKNRDFLDSLVDHSRDFELAYFGIKTLEKSYLLNIQDQICETPQFLFLRVAIGI 184
Query: 179 HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
H+DD ++ TY LMS+ +F HA+PTLFN+GT LSSCFLL M DDSI+GIY TL K
Sbjct: 185 HEDDMEAVATTYDLMSKRYFIHASPTLFNSGTNYNFLSSCFLLAMDDDSIDGIYKTLHKA 244
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A+ISK++GGIG+ +HNIR GS I + G+S+G+VPML+VFN+TARYVDQGG KR GAFA
Sbjct: 245 AMISKASGGIGIHVHNIRGEGSRIASSEGTSSGLVPMLRVFNNTARYVDQGGNKRPGAFA 304
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
IYLEPWH+DIF L+L+KN GKEE RARDLFY LW+PDLFM RV+++ WSLF A G
Sbjct: 305 IYLEPWHSDIFSVLELKKNHGKEELRARDLFYGLWIPDLFMHRVKENLDWSLFSSDTAPG 364
Query: 359 LADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQ 418
L++ +G EF LY +YE+E RA V+ A++LW IL SQIETG PYML+KDSCN+KSNQ+
Sbjct: 365 LSECYGEEFNALYEKYEKENRAIKVVKAQRLWHAILESQIETGGPYMLYKDSCNQKSNQR 424
Query: 419 NLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNR 478
NLGTIKSSNLC EI+E+SSPEETAVCNL S+ALP ++ + V
Sbjct: 425 NLGTIKSSNLCCEIIEYSSPEETAVCNLGSLALPSFINAENDLVT--------------- 469
Query: 479 LFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
FDF +L EVTK++ +NL+KIIDV YPI + + SN +HRPI IG+QGLAD F+ L LPF
Sbjct: 470 -FDFIKLHEVTKVLAKNLDKIIDVTRYPIPSAQVSNKKHRPIAIGVQGLADLFLELRLPF 528
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW 598
+S +A+ LN IFETIY+ A++AS ELA GPY+++ GSPMS+G Q DMWN PS +
Sbjct: 529 DSQKAKILNIQIFETIYHAAVEASCELAEMSGPYDSFNGSPMSQGQFQFDMWNHKPSSLF 588
Query: 599 -DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
DW L+E + K GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY RRVLSGEF VVN
Sbjct: 589 SDWDELKEKVKKAGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYNRRVLSGEFQVVN 648
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
K+LL+DL +LG+W+ ++K +I+ ENGS+ I+ IP+ +K +YKTVWEI Q+ +++MAADR
Sbjct: 649 KYLLRDLIDLGIWNPSMKNRILAENGSIQSINSIPQNIKDLYKTVWEISQRVVIEMAADR 708
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G +IDQSQSLNIH+ P GKLTS HFYAW G+KTGMYYLRT+AA AI+FTVD
Sbjct: 709 GKFIDQSQSLNIHLSNPTLGKLTSCHFYAWKNGLKTGMYYLRTQAATRAIQFTVDM---- 764
Query: 778 NEKANRADNDVEANL 792
E+AN+AD EA L
Sbjct: 765 -EEANKADFAQEACL 778
>gi|149238952|ref|XP_001525352.1| ribonucleoside-diphosphate reductase large chain [Lodderomyces
elongisporus NRRL YB-4239]
gi|146450845|gb|EDK45101.1| ribonucleoside-diphosphate reductase large chain [Lodderomyces
elongisporus NRRL YB-4239]
Length = 862
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/757 (56%), Positives = 555/757 (73%), Gaps = 18/757 (2%)
Query: 22 LKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRV 81
L+ LS GL H + +G+ +TT + +ET AA + HPDY++LAGRV
Sbjct: 28 LRSLSKGLDATHLRLEEAIDAIMSGLPDTLTTKEFYTYVSETVAARVIYHPDYSILAGRV 87
Query: 82 AVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDF 141
L FSE ++ + Y+ R GK S +++D Y+++M++ D I DRD+
Sbjct: 88 EAKFLQLQVPYRFSENVERL-KQYSPRKGKSFSPISEDFYKVVMEHKDVFDKMIKSDRDY 146
Query: 142 DFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHA 201
D YFG KTLE SYLL++D V E PQ M +RVS+GIH +TY+LMSQ +F HA
Sbjct: 147 DLTYFGIKTLENSYLLRIDGEVAETPQQMFLRVSIGIHTHSVSHVEETYNLMSQKYFIHA 206
Query: 202 TPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSY 261
PTL+NAG+ LSSCFL+ MKDDSI+GIY TL + A+ISK++GG+G+ +H+IRA+GSY
Sbjct: 207 LPTLYNAGSKFNYLSSCFLMAMKDDSIDGIYKTLHETALISKASGGVGIHVHDIRANGSY 266
Query: 262 IHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKE 321
I TNG SNG+VPML+VFN+TAR+VDQGGGKR GAFAIYLEPWHAD+F+ LD+RKN G E
Sbjct: 267 IASTNGLSNGLVPMLRVFNNTARFVDQGGGKRPGAFAIYLEPWHADVFDILDMRKNHGNE 326
Query: 322 ECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAK 381
E R RDLFY LW+PDLFMERV+ +G+WSLF P +A GL+D +G +F+ LY +YE+E A
Sbjct: 327 EHRTRDLFYGLWIPDLFMERVKTNGQWSLFSPDEAPGLSDVYGDDFKELYERYEKEKLAT 386
Query: 382 MVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEET 441
I+A+KLW IL SQ ETG PYML+KD+CNRKSNQ+NLGTIKSSNLC EI+E+SSP ET
Sbjct: 387 RTINAQKLWLAILESQTETGGPYMLYKDACNRKSNQKNLGTIKSSNLCCEIIEYSSPTET 446
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNLAS+ALP ++ V D K FDF +L EVTK++T+NLNK+ID
Sbjct: 447 AVCNLASLALPSFLE-------------VSEDDIK---FDFLKLHEVTKVVTKNLNKVID 490
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
V YP+E+ + SN +HRPI +G+QGLAD F+ L LPF+S A+ LN IFET+Y+ A++A
Sbjct: 491 VTMYPVESAKNSNKKHRPIALGVQGLADLFLELRLPFDSSAAKNLNIQIFETVYHAAIEA 550
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW-DWSSLREMISKNGVRNSLLVAP 620
S EL++ +GPY ++ GSP SKG LQ D+WN PSD + DW L+ + K G+RNSLLVAP
Sbjct: 551 SMELSIVEGPYASFQGSPASKGKLQFDLWNHKPSDLYDDWDILKSKVMKYGLRNSLLVAP 610
Query: 621 MPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIY 680
MPTASTSQILG NECFEPYTSN+Y RRVLSGEF VVNK+L+KDL +LGLW+ A++ K++
Sbjct: 611 MPTASTSQILGFNECFEPYTSNLYNRRVLSGEFQVVNKYLIKDLIDLGLWNSAMRNKLMM 670
Query: 681 ENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLT 740
+ GSV I +P+ELK +Y+TVWE+KQK ++DMAADR +IDQ QS+NI+++ P GKLT
Sbjct: 671 DGGSVQNIDILPKELKTLYRTVWELKQKDIIDMAADRAKFIDQLQSMNIYLQNPTIGKLT 730
Query: 741 SLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
S HF+AW G+KTGMYYLRT+AA AI+FT+D + N
Sbjct: 731 SCHFHAWEMGLKTGMYYLRTQAATRAIQFTIDANEAN 767
>gi|397604632|gb|EJK58729.1| hypothetical protein THAOC_21121 [Thalassiosira oceanica]
Length = 966
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/864 (52%), Positives = 599/864 (69%), Gaps = 73/864 (8%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
++V KRDG +P+ KI RL KLS GL+ E+ + + G Y +TT ++D LA
Sbjct: 122 VFVKKRDGSLDPLSEQKILQRLHKLSSGLNLEYLSLPELTSAIMRGTYPNITTLEIDTLA 181
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
+ETAA+ + HPDYA LA R+ ++ HK T FSE + ++++ N R V+ +
Sbjct: 182 SETAASRSTQHPDYAQLAARICATSNHKQTPAKFSEAMIELHD--NGRG-----FVSGQL 234
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVV-ERPQHMLMRVSVGIH 179
E+I + +D I +RD D YFG+KTLER+YLLK DS V+ ERP +M MRV++GIH
Sbjct: 235 AELIERRGDEIDEQIRPERDLDLSYFGYKTLERAYLLKDDSEVIRERPSYMWMRVALGIH 294
Query: 180 K-----DDTD-------------------SALKTYHLMSQHWFTHATPTLFNAGTPQPQL 215
D+TD +A +TYHLMSQ + THA+PTLF+AGT PQL
Sbjct: 295 MTRPELDETDDSGTATIKWTKEEEDAHLEAAFETYHLMSQGYCTHASPTLFHAGTTHPQL 354
Query: 216 SSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPM 275
SSCFL+ M DDSI+GIYDTLK+CA+ISK+AGGIGLS++ IRA G++I GT G SNG+VPM
Sbjct: 355 SSCFLVQMSDDSIDGIYDTLKRCAVISKAAGGIGLSVNKIRARGTFIKGTRGVSNGLVPM 414
Query: 276 LQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVP 335
L+VF+ T+ YVDQGGGKR GAFAIY+EPWHADIF+ L+LRKN GKEE RAR+LFY LWVP
Sbjct: 415 LRVFDSTSHYVDQGGGKRPGAFAIYVEPWHADIFDVLNLRKNHGKEEQRARNLFYGLWVP 474
Query: 336 DLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILN 395
DLFM+RV +DG WSL CP + GL + G +FE LY +YE EGR K I AR+LW IL+
Sbjct: 475 DLFMKRVEEDGVWSLMCPHECPGLGECHGEQFEKLYEKYESEGRHKRQIRARQLWAAILD 534
Query: 396 SQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRY- 454
+QIETG PY+L+KD+ N KSNQQNLGTI+SSNLCTEI+++++ EE AVCNLASI L ++
Sbjct: 535 AQIETGNPYLLYKDAANGKSNQQNLGTIQSSNLCTEIIQYTNEEEVAVCNLASINLSKFV 594
Query: 455 VREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSN 514
V ++G V + SK + FD RL EV K +T NL+K+ID+N YP+E + SN
Sbjct: 595 VTDRG--VYGSASK------PGDAYFDHGRLHEVAKTVTRNLDKVIDINQYPVEGAKLSN 646
Query: 515 LRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYET 574
RHRP+GIG+ GLAD F+ LGLPF S +A++LN+ IFETIY+ AL+AS E+A + G Y +
Sbjct: 647 RRHRPVGIGVSGLADAFLRLGLPFASDDAKELNEAIFETIYHAALEASNEIAAEKGSYSS 706
Query: 575 YFGSPMSKGILQVDMWNI----TPSDR-----------------------WDWSSLREMI 607
+ GSP S G LQ ++W + TPS R +DW LR+ I
Sbjct: 707 FEGSPASNGELQFNLWGVKDDDTPSQRGKRSGAAQSMKHQRYPDVVAGNGYDWDGLRQRI 766
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTEL 667
K G+RNSLLVAPMPTASTSQILG NECFEP+ +N+Y RRV +GEFIVVN HL++DLT++
Sbjct: 767 IKTGLRNSLLVAPMPTASTSQILGVNECFEPFATNLYVRRVKAGEFIVVNPHLIQDLTDM 826
Query: 668 GLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSL 727
GLW+ +++ +++ ++GSV+ I IP+ LK +YKTVWE+K + L+DMAADRG +IDQSQSL
Sbjct: 827 GLWNKSVRNQLMRDSGSVANIDCIPDRLKELYKTVWEMKMRDLIDMAADRGRFIDQSQSL 886
Query: 728 NIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADND 787
N+ P +LT++HFYAW KG+KTG+YYLRT+ A +AI+FTV S+ N N D
Sbjct: 887 NLFTAAPTVSRLTAMHFYAWRKGLKTGIYYLRTKPAVNAIQFTVSKSIDNESSDNNGDEQ 946
Query: 788 VE-ANLAQVVCSLKNQEECMACGS 810
V+ +NL + L ++ EC++C +
Sbjct: 947 VQNSNLPE----LGSESECLSCSA 966
>gi|190347674|gb|EDK39996.2| hypothetical protein PGUG_04094 [Meyerozyma guilliermondii ATCC
6260]
Length = 814
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/761 (57%), Positives = 559/761 (73%), Gaps = 34/761 (4%)
Query: 14 RFD--KITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNH 71
+FD ++ + L LSY L EH D V V AG+ +T L L AE+ A+ T ++
Sbjct: 26 KFDPKRLRSLLDTLSYELDIEHLDLDDVVDSVAAGLPATITVDDLLLLTAESLASRTTSY 85
Query: 72 PDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACL 131
PDY +LAGRV ++ + K +NSFS I K + + ++ + + KNA +
Sbjct: 86 PDYGVLAGRVEMTKIQKSAENSFSANIA-------KIAKIAPNTLSSQLVSVAEKNAEKI 138
Query: 132 DGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYH 191
DGAI + RD++ YF KTL++SYLL E PQ+M MRVS+GIH D +SA++TY
Sbjct: 139 DGAIDHRRDYELSYFAVKTLQKSYLLVGS----ETPQYMFMRVSLGIHGQDVNSAIETYT 194
Query: 192 LMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLS 251
MSQ +F HA+PTLFN+GT LSSCFLL MK+DSI+GIY TL + A+ISK++GGIGL
Sbjct: 195 YMSQKYFIHASPTLFNSGTNYNHLSSCFLLAMKEDSIDGIYKTLHETALISKASGGIGLH 254
Query: 252 IHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEF 311
+HNIRASGS I ++G+S+G+VPML+VFN+TARYVDQGG KR GAFAIYLEPWHADIFE
Sbjct: 255 VHNIRASGSRIASSSGTSSGLVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHADIFEV 314
Query: 312 LDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLY 371
LDL+KN GKEE RARDLFYALW+PDLFMERVR+D +WS F P A GL + +G EF+ LY
Sbjct: 315 LDLKKNHGKEEMRARDLFYALWIPDLFMERVRNDEQWSCFSPDQAPGLENCYGEEFKRLY 374
Query: 372 SQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTE 431
YE +G A V+ A+KLW IL+SQIETG PYML+KD+CN KSNQ+NLGTIKSSNLC E
Sbjct: 375 ESYEAKGLAMKVVRAQKLWDAILDSQIETGGPYMLYKDACNEKSNQKNLGTIKSSNLCCE 434
Query: 432 IVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKI 491
+V++SSP+E AVCNL S+ALP +V KN FD + L +VTK+
Sbjct: 435 VVQYSSPDEVAVCNLGSVALPMFV--------------------KNDNFDSQLLHKVTKV 474
Query: 492 ITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIF 551
+ NLNK+IDV YP+E+ R SN +HRPI +G+QGLAD F+ L LPF+SP A++LN +F
Sbjct: 475 LVNNLNKVIDVTAYPLESARISNKKHRPIAVGVQGLADLFLKLELPFDSPRARELNIQVF 534
Query: 552 ETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW-DWSSLREMISKN 610
ETIY+ A++AS ELA+KDGPYET+ GSP SKG+LQ D+WN PSD + DW L++ + K+
Sbjct: 535 ETIYHAAVEASVELAIKDGPYETFAGSPASKGLLQFDLWNHKPSDLYTDWDELKQKVVKS 594
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLW 670
G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYTRRVL+GEF VVNK+L+K LTEL LW
Sbjct: 595 GMRNSLLVAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVNKYLVKKLTELNLW 654
Query: 671 SHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIH 730
+ +K +I+ GSV I EIP+ ++ ++KTVW+I Q+T++DMA DR +IDQSQSLNIH
Sbjct: 655 NKQMKDRILVAGGSVMNIDEIPQHVRDVFKTVWDISQRTIIDMAVDRAKFIDQSQSLNIH 714
Query: 731 MEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
M P KLTS HFYAW +G+KTG+YYLRT++A+ AI+FTV
Sbjct: 715 MRNPTKSKLTSCHFYAWKQGLKTGLYYLRTQSASRAIQFTV 755
>gi|299471069|emb|CBN78928.1| ribonucleotide reductase large chain subunit [Ectocarpus
siliculosus]
Length = 653
Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/661 (63%), Positives = 525/661 (79%), Gaps = 16/661 (2%)
Query: 153 RSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQ 212
RSYLLK D +VVERPQHM+MRVSVGIHKDD D ++TY LMSQ FTHATPTLFNAGTP+
Sbjct: 6 RSYLLKADGKVVERPQHMIMRVSVGIHKDDIDKVIETYDLMSQRLFTHATPTLFNAGTPK 65
Query: 213 PQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGI 272
PQ+SSCFLL MK+DSI GIYDTLK+CA ISK AGGIGLSIH++RA+ SYI GTNGSSNGI
Sbjct: 66 PQMSSCFLLTMKEDSINGIYDTLKQCAQISKHAGGIGLSIHHVRAANSYIRGTNGSSNGI 125
Query: 273 VPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYAL 332
VPML+VFN+TARYVDQGGGKRKG+ A+YLEPWHADI FLDL+KN G E RARDLFYA+
Sbjct: 126 VPMLRVFNNTARYVDQGGGKRKGSIAVYLEPWHADIVAFLDLKKNHGNELERARDLFYAM 185
Query: 333 WVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYE-EEGRAKMVISARKLWF 391
W+PDLFM+RV DG W+LFCP++A GL+D+ EF+ LY QYE +EG ++ + AR LW
Sbjct: 186 WIPDLFMQRVEADGDWNLFCPNEAPGLSDTHSEEFKELYEQYEAKEGLSRRTMKARLLWD 245
Query: 392 EILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIAL 451
IL SQ+ETGTPYML+KD+CN KSNQ+NLGTIKSSNLCTEIVE+++P+E AVCNLASI L
Sbjct: 246 AILESQVETGTPYMLYKDACNFKSNQKNLGTIKSSNLCTEIVEYTAPDEVAVCNLASINL 305
Query: 452 PRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTR 511
V +P + +K +DFE+L +++++T NLN++ID N+YPIE R
Sbjct: 306 SALV----IPPTAETTKAT---------YDFEKLQHISEVVTRNLNRVIDANYYPIEEAR 352
Query: 512 RSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGP 571
SN+RHRPIGIG+QGLAD FI + LPFES EA +LN+DIFETIY+ A+ AS ELA + GP
Sbjct: 353 NSNMRHRPIGIGVQGLADAFIKMRLPFESEEACKLNRDIFETIYFGAVNASVELAKELGP 412
Query: 572 YETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILG 631
YETY GSP S+G+LQ D+W + P+ R DW++L+ ++++G+RNSLLVAPMPTAST+QILG
Sbjct: 413 YETYAGSPASEGLLQFDLWGVKPTGRHDWAALKARMAEHGLRNSLLVAPMPTASTAQILG 472
Query: 632 NNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEI 691
NNE EP+TSN+Y RRVL+GEF VVNK+LL+DLTE GLW+ ++ +II + GSV + +I
Sbjct: 473 NNESVEPFTSNMYNRRVLAGEFTVVNKYLLRDLTERGLWTPEVRNQIIADQGSVQNVRQI 532
Query: 692 PEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGM 751
P+ELK +YKTVWEIKQK +++ AADRG YI QSQS+N+HM + GKL+S+HFYAW KG+
Sbjct: 533 PQELKDLYKTVWEIKQKFILNQAADRGAYICQSQSMNVHMAEASFGKLSSMHFYAWKKGL 592
Query: 752 KTGMYYLRTRAAADAIKFTVDTSVL--NNEKANRADNDVEANLAQVVCSLKNQEECMACG 809
KTGMYYLRTR ADAI+FTVD S L + E+A ++ A ++ + EC++CG
Sbjct: 593 KTGMYYLRTRPKADAIQFTVDQSSLKVSREEAAKSGAKSGAEGGSAGLEVEEEPECLSCG 652
Query: 810 S 810
+
Sbjct: 653 A 653
>gi|163801386|ref|ZP_02195285.1| hypothetical protein 1103602000598_AND4_10974 [Vibrio sp. AND4]
gi|159174875|gb|EDP59675.1| hypothetical protein AND4_10974 [Vibrio sp. AND4]
Length = 752
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/771 (55%), Positives = 560/771 (72%), Gaps = 33/771 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDGRKE DK+T R + L+ GL E P+ VAQ+V +G+Y G+ T++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEMLADGLKVE---PIAVAQRVVSGLYDGIKATEIDVFL 57
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++ HPDYA LA RV VS+L K T N ++ ++ + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKET-NGYAAATSEL---------SEIGILSDAY 107
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ +N L+ I Y RD+ FDYFG+KTLERSYLLK+ VVERPQ M MRV+V +
Sbjct: 108 VNFVARNQLALEDMIDYKRDYQFDYFGYKTLERSYLLKVKGAVVERPQDMFMRVAVVVAG 167
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + + Y L+S ++THATPTLFNAG QLSSCFLL M++DSI+GIYDTLK CA+
Sbjct: 168 DDLEEIRELYDLLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSIDGIYDTLKDCAL 227
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIRA+G+ I GTNG SNGI+PML+VFN+TARYVDQGGGKRKG+FA+Y
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIIPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI FLDLRKN GKEE RARDLF ALWVPDLFM+RV +D +W+LF P + L+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMQRVENDAEWTLFSPHNTKDLS 347
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ +G EF Y +YE G I AR+L +I+ SQ ETGTPYML+KD+CN KSNQ+NL
Sbjct: 348 ELYGSEFNRKYQEYERIGLGVKTIKARQLMTKIIESQTETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EI+E S+P+ETA CNLAS+ALP++V + G F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASVALPKFVTDTG--------------------F 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L +VTK+ +NL+++IDVN++P +SN HRP+G+GIQGLAD F + LPF+S
Sbjct: 448 DFEKLHQVTKVAIKNLDRVIDVNYHPTNKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDS 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA LN+DI ET+Y+ +L+AS E+A + G Y +Y GSP+S+G+ Q D+W PS RWDW
Sbjct: 508 KEALHLNRDIAETMYHASLEASCEIAKQKGTYSSYDGSPISQGLFQFDLWGKQPSSRWDW 567
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S L+ I+++GVRNSLL+A MPTAST+QILGNNE FE TSN+Y R+ LSGEFI++NKHL
Sbjct: 568 SQLKLKIAEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNLYKRQTLSGEFIILNKHL 627
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
++DL + GLW+ ++ I+ NGSV I IP++L+++Y+TVWEI QK ++DM+A+R +
Sbjct: 628 VRDLEKNGLWTSKIRDAILLNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAERAPF 687
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
+ QSQSLN+ + P ++ ++HFYAW +G+KTGMYYLR++ +A+A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSANAVKVTV 738
>gi|343495112|ref|ZP_08733307.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
nigripulchritudo ATCC 27043]
gi|342823809|gb|EGU58401.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
nigripulchritudo ATCC 27043]
Length = 751
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/810 (54%), Positives = 570/810 (70%), Gaps = 59/810 (7%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M VIKRDGR+E DK+T R + L+ GL E P+ VAQKV +G+Y G+ T++D
Sbjct: 1 MDVIKRDGRREKTSLDKVTRRAEALADGLKVE---PIAVAQKVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET+A++ HPDYA LA RV VS+L K T+ F + + + ++++D
Sbjct: 58 AETSASLAAEHPDYAKLAARVLVSSLQKETQG-FQWATEQL---------SEIGILSEDY 107
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ + + I Y RD+ FDYFG+KTLERSYLLK+D +VERPQ M MRV++ +
Sbjct: 108 VAQVRRQGPEIAELIDYRRDYQFDYFGYKTLERSYLLKVDGNIVERPQDMYMRVAIAVAG 167
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D + Y ++S ++THATPTLFNAG QLSSCFLL M+DDSI GIYDTLK CA+
Sbjct: 168 EDIAQIKELYDMLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQDDSISGIYDTLKDCAL 227
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIGL IHNIRASG+ I GTNG SNGI+PML+VFN+TARYVDQGGGKRKG+FAIY
Sbjct: 228 ISKSAGGIGLHIHNIRASGAPIIGTNGISNGIIPMLKVFNETARYVDQGGGKRKGSFAIY 287
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI FLDLRKN GKEE RARDLF +LWVPDLFMERV DG+W+LF +A GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLSLWVPDLFMERVELDGEWTLFSEHNAKGLS 347
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G +F LY +YE EG I AR L +I+ SQ ETGTPYML+KDSCN KSNQ+NL
Sbjct: 348 DVYGDDFVALYEKYEREGLGIKTIKARNLMTQIIESQAETGTPYMLYKDSCNIKSNQKNL 407
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EI+E S+PEETA CNLAS+ALP+ V + F
Sbjct: 408 GTIKSSNLCAEIMEVSTPEETAACNLASLALPKCVIDGQ--------------------F 447
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++L E+TKI +NL+++IDVN++P + SN HRP+G+GIQGLAD F L L ++S
Sbjct: 448 DFDKLHEITKIAIKNLDRVIDVNYHPTDKIEVSNHAHRPVGLGIQGLADVFFKLHLAYDS 507
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN+ I ET+Y+ +L+AS+ELA G Y +Y GSP S+G Q D+W++ PSDRWDW
Sbjct: 508 EEARELNRAIAETMYHASLEASSELARDLGAYSSYDGSPASQGTFQFDLWDVQPSDRWDW 567
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++LRE +S++G+RNSLL+A MPTAST+QILGN E FE TSNIY R+ LSGEFI+VN+HL
Sbjct: 568 NALREQVSQHGLRNSLLIAQMPTASTAQILGNTEAFEAQTSNIYKRQTLSGEFIIVNRHL 627
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+ L E GLW+ A++ II NGS+ +I IPE++K++Y+T+WE+ QK ++DM+ADRG Y
Sbjct: 628 VAALEERGLWTPAIRDSIILNNGSLQEIEAIPEDVKSVYRTIWELSQKVIIDMSADRGPY 687
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
+ QSQSLN+ + P ++ ++HFYAW +G+KTGMYYLRT+ +A+A+K TV NNE
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRTKPSANAVKVTVG----NNE- 742
Query: 781 ANRADNDVEANLAQVVCSLKNQEECMACGS 810
EEC+ CG+
Sbjct: 743 ---------------------DEECVGCGA 751
>gi|13242650|ref|NP_077665.1| EsV-1-180 [Ectocarpus siliculosus virus 1]
gi|13177450|gb|AAK14594.1|AF204951_179 EsV-1-180 [Ectocarpus siliculosus virus 1]
Length = 765
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/782 (56%), Positives = 555/782 (70%), Gaps = 32/782 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MY+ KRDGRKE V FDKI+AR+KKL YGL D V +AQKV +GVY GVTTT+LD LA
Sbjct: 4 MYITKRDGRKENVLFDKISARIKKLCYGLEPNFVDHVAIAQKVISGVYTGVTTTELDTLA 63
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA M + HPDY+LLAGR+AVS LHK TK SF ET+ D++ Y +VADDV
Sbjct: 64 AETAAYMAIAHPDYSLLAGRIAVSRLHKETKESFVETMADLHAY---------GMVADDV 114
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ +I NA LDGAI Y +D ++D+F FKTLE+SYLLK+D ++VER QHMLMRV+VGIHK
Sbjct: 115 HTVIQDNAHLLDGAIDYGKDLEYDFFAFKTLEKSYLLKIDGKIVERIQHMLMRVAVGIHK 174
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +S L+TY MS+ W THATPTLFNAGT QLSSCFLL M+DDS++GIYDTLK+ A
Sbjct: 175 DDIESVLETYTGMSERWMTHATPTLFNAGTVNNQLSSCFLLAMQDDSVDGIYDTLKQTAK 234
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLS+ NIRA GSYI GTNG S+GIVP+L+ F TAR+++Q G+RKG+FA+Y
Sbjct: 235 ISKFAGGIGLSVSNIRAKGSYIKGTNGVSDGIVPLLRCFESTARFINQ-AGRRKGSFAMY 293
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LE WHADI EFLDL+KN G E RARDLFY LWV DLFM RV+ DG W+L PSDA L
Sbjct: 294 LEVWHADILEFLDLKKNNGNELMRARDLFYGLWVSDLFMRRVKADGDWTLLSPSDAPDLI 353
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D G +F+ Y +YE G K I AR L+ +++ SQIETG PY LFKD+CN KSNQ++L
Sbjct: 354 DLHGADFDQAYKKYESNGIGK-TIKARTLFAKVVESQIETGGPYYLFKDACNAKSNQRHL 412
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLC E++++SS EE AVCNLASI L R+VR +R F
Sbjct: 413 GTIRSSNLCAEVIQYSSKEEIAVCNLASINLVRHVR-------------------ADRTF 453
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFERL K +NLNK+IDVN YP+E R SN++HRP G+G+Q L D ++++G PFES
Sbjct: 454 DFERLHRTAKQAIKNLNKVIDVNFYPLEECRLSNMKHRPCGLGVQALHDVYMVMGFPFES 513
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD-RWD 599
EA LNK IFETIY+ +++AS E A DGPYE++ GSP S G LQ D+W D R D
Sbjct: 514 EEAATLNKQIFETIYHGSVEASIERAKIDGPYESFQGSPASFGKLQFDLWGHEVDDSRHD 573
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQIL-GNNECFEPYTSNIYTRRVLSGEFIVVNK 658
W+ + + K G+RNSLL A MPTAS++ G E E T+ +Y RRVLSGEF +VNK
Sbjct: 574 WTKTKADLQKYGMRNSLLTALMPTASSASFCSGGTEAAECSTAVLYNRRVLSGEFPIVNK 633
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
+L+K+L LGLW +K II GSV I IPE+ + ++K VWE+ QK +++ AA RG
Sbjct: 634 YLIKELINLGLWDGEMKNAIIRGGGSVQGIESIPEKTRTLFKNVWEVSQKAIIEQAAARG 693
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN 778
YIDQSQS+NI E+P K++S +Y W G+KT YY+R+R AD ++FTV + N
Sbjct: 694 PYIDQSQSMNIFFERPTMAKISSALYYGWELGLKTASYYVRSRPVADPVQFTVSSEKSVN 753
Query: 779 EK 780
E+
Sbjct: 754 EE 755
>gi|146414790|ref|XP_001483365.1| hypothetical protein PGUG_04094 [Meyerozyma guilliermondii ATCC
6260]
Length = 814
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/761 (57%), Positives = 558/761 (73%), Gaps = 34/761 (4%)
Query: 14 RFD--KITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNH 71
+FD ++ + L LSY L EH D V V AG+ +T L L AE+ A+ T ++
Sbjct: 26 KFDPKRLRSLLDTLSYELDIEHLDLDDVVDSVAAGLPATITVDDLLLLTAESLASRTTSY 85
Query: 72 PDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACL 131
PDY +LAGRV ++ + K+ +N FS I K + + ++ + + KNA +
Sbjct: 86 PDYGVLAGRVEMTKIQKLAENLFSANIA-------KIAKIAPNTLSSQLVSVAEKNAEKI 138
Query: 132 DGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYH 191
DGAI + RD++ YF KTL++SYLL E PQ+M MRVS+GIH D +SA++TY
Sbjct: 139 DGAIDHRRDYELSYFAVKTLQKSYLLVGS----ETPQYMFMRVSLGIHGQDVNSAIETYT 194
Query: 192 LMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLS 251
MSQ +F HA+PTLFN+GT LSSCFLL MK+DSI+GIY TL + A+ISK++GGIGL
Sbjct: 195 YMSQKYFIHASPTLFNSGTNYNHLSSCFLLAMKEDSIDGIYKTLHETALISKASGGIGLH 254
Query: 252 IHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEF 311
+HNIRASGS I ++G+S+G+VPML+VFN+TARYVDQGG KR GAFAIYLEPWHADIFE
Sbjct: 255 VHNIRASGSRIASSSGTSSGLVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHADIFEV 314
Query: 312 LDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLY 371
LDL+KN GKEE RARDLFYALW+PDLFMERVR+D +WS F P A GL + +G EF+ LY
Sbjct: 315 LDLKKNHGKEEMRARDLFYALWIPDLFMERVRNDEQWSCFSPDQAPGLENCYGEEFKRLY 374
Query: 372 SQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTE 431
YE +G A V+ A+KLW IL+SQIETG PYML+KD+CN KSNQ+NLGTIKSSNLC E
Sbjct: 375 ESYEAKGLAMKVVRAQKLWDAILDSQIETGGPYMLYKDACNEKSNQKNLGTIKSSNLCCE 434
Query: 432 IVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKI 491
+V++SSP+E AVCNL S+ALP +V KN FD + L +VTK+
Sbjct: 435 VVQYSSPDEVAVCNLGSVALPMFV--------------------KNDNFDSQLLHKVTKV 474
Query: 492 ITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIF 551
+ NLNK+IDV YP+E+ R SN +HRPI +G+QGLAD F+ L LPF+SP A++LN +F
Sbjct: 475 LVNNLNKVIDVTAYPLESARISNKKHRPIAVGVQGLADLFLKLELPFDSPRARELNIQVF 534
Query: 552 ETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW-DWSSLREMISKN 610
ETIY+ A++AS ELA+KDGPYET+ GSP SKG+LQ D+WN PSD + DW L++ + K+
Sbjct: 535 ETIYHAAVEASVELAIKDGPYETFAGSPASKGLLQFDLWNHKPSDLYTDWDELKQKVVKS 594
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLW 670
G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYTRRVL+GEF VVNK+L+K LTEL LW
Sbjct: 595 GMRNSLLVAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVNKYLVKKLTELNLW 654
Query: 671 SHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIH 730
+ +K +I+ GSV I EIP+ ++ ++KTVW+I Q+T++DMA DR +IDQ QSLNIH
Sbjct: 655 NKQMKDRILVAGGSVMNIDEIPQHVRDVFKTVWDILQRTIIDMAVDRAKFIDQLQSLNIH 714
Query: 731 MEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
M P KLTS HFYAW +G+KTG+YYLRT++A+ AI+FTV
Sbjct: 715 MRNPTKSKLTSCHFYAWKQGLKTGLYYLRTQSASRAIQFTV 755
>gi|448100140|ref|XP_004199282.1| Piso0_002711 [Millerozyma farinosa CBS 7064]
gi|359380704|emb|CCE82945.1| Piso0_002711 [Millerozyma farinosa CBS 7064]
Length = 856
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/802 (53%), Positives = 576/802 (71%), Gaps = 36/802 (4%)
Query: 3 VIKRDGRKEPVRFD----KITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDE 58
V+ R R+E + D K+T L++L++ L ++ + L+ K+ G+ ++ +++
Sbjct: 5 VVVRAEREEIITEDFDRVKLTRFLQRLNFDLDSKYVNIELLVDKIVNGLPDRISISEIYG 64
Query: 59 LAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
LA+E+ A+ +NHPD+A+LAGRV + L K SFS+ ++ + + L +
Sbjct: 65 LASESIASNVINHPDHAVLAGRVVAAKLQKEMGPSFSKNVEKIVAMNKENHSTSKRLFSS 124
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ ++ KN D + + RD++ YFG KTLE+SYLL + ++ E PQ + +RV++GI
Sbjct: 125 EFLSMVQKNREFFDSLVDHSRDYELAYFGIKTLEKSYLLNIQDQICETPQFLFLRVAIGI 184
Query: 179 HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
H DD ++ TY LMS+ +F HA+PTLFN+GT LSSCFLL M DDSI+GIY TL K
Sbjct: 185 HGDDMEAVATTYDLMSKRYFIHASPTLFNSGTNYNFLSSCFLLAMDDDSIDGIYKTLHKA 244
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A+ISK++GGIG+ +HNIR G+ I + G+S+G+VPML+VFN+TARYVDQGG KR GAFA
Sbjct: 245 AMISKASGGIGIHVHNIRGEGARIASSEGTSSGLVPMLRVFNNTARYVDQGGNKRPGAFA 304
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
IYLEPWH+DIF L+L+KN GKEE RARDLFY LW+PDLFM RV+++ WSLF A G
Sbjct: 305 IYLEPWHSDIFSLLELKKNHGKEELRARDLFYGLWIPDLFMHRVKENLDWSLFSSDTAPG 364
Query: 359 LADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQ 418
L++ +G EF +Y +YE+E +A V+ A++LW IL SQIETG PYML+KDSCN+KSNQ+
Sbjct: 365 LSECYGEEFNAVYERYEKENKAIKVVKAQRLWHAILESQIETGGPYMLYKDSCNKKSNQR 424
Query: 419 NLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNR 478
NLGTIKSSNLC EI+E+SSPEETAVCNL S+ALP ++ D++N
Sbjct: 425 NLGTIKSSNLCCEIIEYSSPEETAVCNLGSLALPSFI------------------DAEND 466
Query: 479 L--FDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGL 536
L FDF +L EVTK++ +NL+KIIDV YPI + + SN++HRPI IG+QGLAD F+ L L
Sbjct: 467 LVAFDFVKLHEVTKVLAKNLDKIIDVTRYPIRSAQVSNMKHRPIAIGVQGLADLFLELRL 526
Query: 537 PFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD 596
PF+S +A+ LN IFETIY+ A++AS ELA GPY+++ GSPMS+G Q DMW+ PS
Sbjct: 527 PFDSQKAKMLNIQIFETIYHAAIEASCELAESFGPYDSFNGSPMSQGKFQFDMWSHKPSP 586
Query: 597 RW-DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
+ DW L+E + K GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY RRVLSGEF V
Sbjct: 587 LFADWDELKEKVKKTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYNRRVLSGEFQV 646
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VNK+LL+DL +LG+WS ++K++I+ ENGS+ I IP+ +K +YKTVWEI QK +++MAA
Sbjct: 647 VNKYLLRDLIDLGIWSPSMKSRILAENGSIQNIKGIPQNIKDLYKTVWEISQKVVIEMAA 706
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
DRG +IDQSQSLNIH+ P GKLTS HFYAW G+KTGMYYLRT+AA AI+FTVD
Sbjct: 707 DRGKFIDQSQSLNIHLSNPTLGKLTSCHFYAWKNGLKTGMYYLRTQAATRAIQFTVDM-- 764
Query: 776 LNNEKANRADNDVEANLAQVVC 797
E+A++AD +AQ C
Sbjct: 765 ---EEADKAD------IAQETC 777
>gi|344229874|gb|EGV61759.1| ribonucleoside-diphosphate reductase large chain [Candida tenuis
ATCC 10573]
Length = 816
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/752 (57%), Positives = 547/752 (72%), Gaps = 17/752 (2%)
Query: 22 LKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRV 81
LK L GL E D + K+ + T +L E AE+ AA T +HPDY+LLAGRV
Sbjct: 2 LKWLQRGLRLELSDLDEILDKIALSMADKTTVNELLEYTAESLAARTTSHPDYSLLAGRV 61
Query: 82 AVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDF 141
L K+ NSFS+++ +Y Y+ ++ K V+ VY++ MKN LD A+ +RD
Sbjct: 62 EAVKLQKMVSNSFSDSMSKLYYNYHPKTNKHTPSVSKQVYDVAMKNRDVLDTAVESERDL 121
Query: 142 DFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHA 201
YFG KTLERSYL+K++ E PQ++ MRV++GIH D + A++TY+LMS+ + HA
Sbjct: 122 TISYFGIKTLERSYLIKVNEIPTETPQYLFMRVALGIHGGDVEDAIETYNLMSKKYIMHA 181
Query: 202 TPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSY 261
+PTLF+AGT LSSCFLL M+DDSI+GIY TL K A+ISK++GGIGL IHN+RA GS
Sbjct: 182 SPTLFSAGTDYNFLSSCFLLAMEDDSIDGIYKTLHKAALISKASGGIGLHIHNVRARGSL 241
Query: 262 IHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKE 321
+ + G S+G+VPML+VFNDTARYVDQGG KR GAFA++LEPWH D+FE LDLRKN GKE
Sbjct: 242 VSTSGGKSSGLVPMLRVFNDTARYVDQGGNKRPGAFAVFLEPWHTDVFEVLDLRKNYGKE 301
Query: 322 ECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAK 381
E RARDLFY LW+PDLFM++V+DD W LF P + GL+D +G EF+ LY +YE G A
Sbjct: 302 ELRARDLFYGLWIPDLFMQKVKDDEDWCLFSPDVSPGLSDCYGDEFKALYEKYERAGDAV 361
Query: 382 MVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEET 441
V+ A+KLW IL SQ ETG PYM++KD+CN KSNQ+NLGTIKSSNLC EIVE+SS EET
Sbjct: 362 RVVKAQKLWQSILESQTETGGPYMMYKDACNTKSNQKNLGTIKSSNLCCEIVEYSSKEET 421
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ALP +V E D + F+F +L EVTK++ +NL+KI+D
Sbjct: 422 AVCNLGSLALPSFVNE----------------DKDSISFNFMKLHEVTKVLGKNLDKIVD 465
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+ YP E SN +HRPI IG+QGLAD F LL +PFES EA++LN IFETIY+ A++
Sbjct: 466 ITRYPDEGAETSNRKHRPIAIGVQGLADVFALLRIPFESKEAKKLNIQIFETIYHAAVEG 525
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW-DWSSLREMISKNGVRNSLLVAP 620
S ELA K G YET+ GSP S+G+LQ D WN PSD + DW+ L+E + G+RNSLLV P
Sbjct: 526 SIELAKKHGAYETFKGSPASQGMLQFDFWNHKPSDLFDDWNDLKENMMVYGLRNSLLVGP 585
Query: 621 MPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIY 680
MPTASTSQILG NECFEP+TSNIY+RRV SGEF VVNK+L+ DL ELGLW+ LK KI+
Sbjct: 586 MPTASTSQILGFNECFEPFTSNIYSRRVTSGEFQVVNKYLINDLIELGLWNQDLKDKILL 645
Query: 681 ENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLT 740
GSV I EIP E+K +YKTVWEI QK +++MAADRG ++DQSQS+NI+M+ P + KLT
Sbjct: 646 AEGSVQGIPEIPVEIKELYKTVWEISQKVILEMAADRGRFVDQSQSMNIYMKNPTYSKLT 705
Query: 741 SLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
S HFY+W G+KTGMYYLRT+AA+ AI+FT++
Sbjct: 706 SCHFYSWKLGLKTGMYYLRTQAASRAIQFTIE 737
>gi|299472902|emb|CBN80471.1| EsV-1-180 [Ectocarpus siliculosus]
Length = 766
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/773 (56%), Positives = 553/773 (71%), Gaps = 32/773 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MY+ KRDGRKE V FDKI+AR+KKL YGL + D V +AQKV +GVY GVTTT+LD LA
Sbjct: 4 MYITKRDGRKENVLFDKISARIKKLCYGLDSRYVDHVAIAQKVISGVYAGVTTTELDTLA 63
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA M ++HPDY+LLAGR+AVS+LHK TK SF ET+ D+++Y +VADDV
Sbjct: 64 AETAAYMAISHPDYSLLAGRIAVSSLHKETKESFVETMADLHDY---------GMVADDV 114
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ I NA LDGAI Y +D ++D+F FKTLE+SYLLK+D +VER QHMLMRV+VGIHK
Sbjct: 115 HAAIQDNAHLLDGAIDYGKDLEYDFFAFKTLEKSYLLKIDGNIVERIQHMLMRVAVGIHK 174
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +S L TY +S+ W THATPTLFNAGT QLSSCFLL M+DDS++GIYDTLK+ A
Sbjct: 175 DDIESVLDTYTELSERWMTHATPTLFNAGTVNNQLSSCFLLAMQDDSVDGIYDTLKQTAK 234
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLS+ NIRA GSYI GTNG S+GIVP+L+ F TAR+++Q G+RKG+FA+Y
Sbjct: 235 ISKFAGGIGLSVSNIRAKGSYIKGTNGVSDGIVPLLRCFESTARFINQ-AGRRKGSFAMY 293
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LE WHADI EFLDL+KN G E RARDLFY LWV DLFM RV+ DG W+L PSDA L
Sbjct: 294 LEMWHADILEFLDLKKNNGNELMRARDLFYGLWVSDLFMHRVKADGDWTLLSPSDAPDLI 353
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D G +F+ Y +YE +G K I AR L+ +++ SQIETG PY LFKDSCN KSNQQ+L
Sbjct: 354 DLHGADFDRAYEKYESDGIGK-TIKARTLFAKVVESQIETGGPYYLFKDSCNAKSNQQHL 412
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTI+SSNLC E++++SS EE AVCNLASI L R+V+ ++ F
Sbjct: 413 GTIRSSNLCAEVIQYSSKEEIAVCNLASINLVRHVK-------------------PDKTF 453
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFERL + K +NLNK+ID N YP+E SN++HRP G+G+Q L D F+++G PFES
Sbjct: 454 DFERLHKTAKQAIKNLNKVIDANFYPLEECSLSNMKHRPCGLGVQALHDVFMVMGFPFES 513
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD-RWD 599
EA LNK IFETIY+ +++AS E A DGPYE++ GSP S G LQ D+W D R D
Sbjct: 514 EEAATLNKQIFETIYHGSVEASIERAKIDGPYESFQGSPASFGKLQFDLWGHEVDDSRHD 573
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQIL-GNNECFEPYTSNIYTRRVLSGEFIVVNK 658
W+ +R + G+RNSLL A MPTAS++ G E E T+ +Y RRVLSGEF +VNK
Sbjct: 574 WTKIRGDLKTYGMRNSLLTALMPTASSASFCSGGTEAAECSTAVLYNRRVLSGEFPIVNK 633
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
+L+++L +LGLW +K II GSV I IPE+ + ++K VWE+ QK +++ AA RG
Sbjct: 634 YLIRELIKLGLWDGEMKNAIIRGGGSVQGIESIPEKTRMLFKNVWEVSQKAVIEQAAARG 693
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
YIDQSQS+NI E+P K++S FY W G+KT YY+R+R AD ++FTV
Sbjct: 694 PYIDQSQSMNIFFERPTVAKISSALFYGWKLGLKTASYYVRSRPVADPVQFTV 746
>gi|354546080|emb|CCE42809.1| hypothetical protein CPAR2_204520 [Candida parapsilosis]
Length = 832
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/749 (55%), Positives = 545/749 (72%), Gaps = 17/749 (2%)
Query: 24 KLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAV 83
+ +GL + + + AG+ +T ++ A+E A+ ++HPDYA+LAGR+
Sbjct: 34 RFCHGLDTSYIKLDDIVTSILAGLPDKITIHEIYNFASEVIASRVIHHPDYAILAGRMVS 93
Query: 84 SNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDF 143
L FSE I+ + + N R G+ S ++D+ YEI+MK+ DG I +
Sbjct: 94 HLLQLQVPYRFSENIQRLKDTTNSR-GEPYSQMSDNFYEIVMKHREEFDGIIKKTEKIEL 152
Query: 144 DYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATP 203
YFG KTLE SYL + +++ E P++M +RV++ IH+DD + +TY LMSQ +F HA+P
Sbjct: 153 AYFGIKTLENSYLWRTGNKIAETPEYMFLRVAIEIHQDDIQAVEETYVLMSQKYFIHASP 212
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TL+NAG LSSCFLL MKDDSI+GIY TL + A+ISK++GGIG+ IHNIRA GS+I
Sbjct: 213 TLYNAGCAYNYLSSCFLLAMKDDSIDGIYQTLHEAALISKASGGIGIHIHNIRAQGSHIA 272
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
TNG + G+VPML+VFN+TARYVDQGGGKR GAFAIYLEPWHAD+FE L++RKN G EE
Sbjct: 273 STNGRAGGVVPMLRVFNNTARYVDQGGGKRPGAFAIYLEPWHADVFEILNMRKNHGNEEF 332
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV 383
R RDLFY LW+PDLFM+RV+ G WSLF P A GL+D +G EF LY +YE +G A
Sbjct: 333 RTRDLFYGLWIPDLFMQRVKSGGDWSLFSPDVAPGLSDVYGSEFIELYEKYEAQGLASAT 392
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAV 443
I A+KLW IL SQ ETG PYML+KD+CN+K+NQ NLGTIKSSNLC EIVE+SSP ETAV
Sbjct: 393 IKAQKLWLAILESQTETGGPYMLYKDACNQKTNQSNLGTIKSSNLCCEIVEYSSPSETAV 452
Query: 444 CNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVN 503
CNLAS+ LP +++ ++ FDF++L VTK++T NLNK+IDV
Sbjct: 453 CNLASLGLPSFLQSTEDSIE----------------FDFDKLHSVTKVVTRNLNKVIDVT 496
Query: 504 HYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASA 563
YP+ + RSN ++RPI IG+QGLAD F+ L LPF+S EA++LN IFETIY+ A++AS
Sbjct: 497 RYPVNSAERSNKKNRPIAIGVQGLADLFLELRLPFDSLEAKKLNSQIFETIYHAAVEASL 556
Query: 564 ELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPT 623
EL++ +GPY T+ GSP S+ ILQ DMWN P DW L++ + +G+RNSLLVAPMPT
Sbjct: 557 ELSILEGPYSTFAGSPASQDILQFDMWNQKPEFYDDWDQLKDNVRSHGLRNSLLVAPMPT 616
Query: 624 ASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENG 683
ASTSQILG NECFEPYTSN+YTRRV+SGEF VVNK+L++DL +LG+W+ AL++KII + G
Sbjct: 617 ASTSQILGFNECFEPYTSNLYTRRVISGEFQVVNKYLIRDLVDLGIWNSALRSKIIQDGG 676
Query: 684 SVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLH 743
S+ I IP +++ +Y+TVWE+KQK ++DMAADRG +IDQSQS+NI+M P GKLTS H
Sbjct: 677 SIQNIPVIPGDIRKLYRTVWELKQKDIIDMAADRGKFIDQSQSMNIYMSNPTIGKLTSCH 736
Query: 744 FYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
F+AW KG+KTGMYYLRT+AAA AI+FTVD
Sbjct: 737 FHAWEKGLKTGMYYLRTQAAARAIQFTVD 765
>gi|448527129|ref|XP_003869437.1| Rnr3 ribonucleotide reductase large subunit [Candida orthopsilosis
Co 90-125]
gi|380353790|emb|CCG23302.1| Rnr3 ribonucleotide reductase large subunit [Candida orthopsilosis]
Length = 819
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/751 (56%), Positives = 543/751 (72%), Gaps = 17/751 (2%)
Query: 22 LKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRV 81
L K +GL H + + +G+ +T +L A+E A+ ++HPDYA+ AGR+
Sbjct: 21 LVKFCHGLDTVHVKLDDIVTSILSGLPDSITIHELYNFASEVIASRIIHHPDYAIFAGRM 80
Query: 82 AVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDF 141
L +FSE I+ + N R GK+ S ++D YEI++K+ D I
Sbjct: 81 VAHLLQLQIPYTFSENIERLKQTTNAR-GKQYSQISDKFYEIVVKHREQFDEIIEKTEKI 139
Query: 142 DFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHA 201
+ YFG KTLE SYL ++D +V E P++M +RV++ IH DD ++ +TY LMSQ F HA
Sbjct: 140 ELAYFGIKTLENSYLWRIDDKVAETPEYMFLRVAIEIHYDDIEAVEETYELMSQKHFIHA 199
Query: 202 TPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSY 261
+PTL+NAG LSSCFLL MKDDSI+GIY TL + A+ISK++GGIG+ IHNIRA GS+
Sbjct: 200 SPTLYNAGCEYNYLSSCFLLAMKDDSIDGIYQTLHEAALISKASGGIGIHIHNIRAQGSH 259
Query: 262 IHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKE 321
I TNG S G+VPML+VFN+TARYVDQGGGKR GAFAIY+EPWHADIF+ L++RKN G E
Sbjct: 260 ISSTNGRSGGVVPMLRVFNNTARYVDQGGGKRPGAFAIYMEPWHADIFDILNMRKNHGNE 319
Query: 322 ECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAK 381
E R RDLFY LW+PDLFM+RV+ WSLF P A GL+D +G EF +Y +YE +G A
Sbjct: 320 ELRTRDLFYGLWIPDLFMQRVKSGDDWSLFSPDIAPGLSDVYGSEFVKMYEKYETQGLAS 379
Query: 382 MVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEET 441
I A+KLW IL SQ ETG PYML+KD+CN+K+NQ NLGTIKSSNLC EIVE+S+P+ET
Sbjct: 380 ATIKAQKLWLAILESQTETGGPYMLYKDACNQKTNQSNLGTIKSSNLCCEIVEYSAPDET 439
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNLAS+ LP ++R ++ FDF++L VTK++T NLNK+ID
Sbjct: 440 AVCNLASLGLPSFLRSTDDCIE----------------FDFDKLHSVTKVVTRNLNKVID 483
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
V YP+E+ SN R+RPI +G+QGLAD F+ L LPF+S EA++LN IFETIY+ A++A
Sbjct: 484 VTRYPVESAETSNKRNRPIALGVQGLADLFLELRLPFDSQEAKKLNSQIFETIYHAAVEA 543
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPM 621
S ELA D PY T+ GSP SKG LQ DMWN P DW L++ + G+RNSLL+APM
Sbjct: 544 SIELAKLDEPYFTFAGSPASKGTLQFDMWNHKPEFYDDWDQLKDDVKNYGMRNSLLIAPM 603
Query: 622 PTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYE 681
PTASTSQILG NECFEPYTSN+YTRRV+SGEF VVNK+L+KDL++LG+W+ A++ +II +
Sbjct: 604 PTASTSQILGFNECFEPYTSNLYTRRVISGEFQVVNKYLIKDLSDLGIWNSAMRNRIIQD 663
Query: 682 NGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTS 741
GS+ IS IP+++K +Y+TVWE+KQK ++DMAADRG +IDQSQS+NI+M+ P GKLTS
Sbjct: 664 GGSIQDISVIPKDIKELYRTVWELKQKDIIDMAADRGKFIDQSQSMNIYMQNPTIGKLTS 723
Query: 742 LHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
HFYAW KG+KTGMYYLRT+AA AI+FTVD
Sbjct: 724 CHFYAWEKGLKTGMYYLRTQAATRAIQFTVD 754
>gi|424037730|ref|ZP_17776455.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-02]
gi|408895211|gb|EKM31675.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-02]
Length = 735
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/754 (55%), Positives = 546/754 (72%), Gaps = 33/754 (4%)
Query: 18 ITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALL 77
+T R + L+ GL E P+ VAQ+V +G+Y G+ T++D AETAA++ HPDYA L
Sbjct: 1 MTRRAEALADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFLAETAASLATEHPDYAKL 57
Query: 78 AGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIY 137
A RV VS+L K T + ++ +D+ + +++D + + KN L+ I Y
Sbjct: 58 AARVMVSSLQKET-SGYATATRDL---------SEIGILSDVYVDFVAKNQFALEDMIDY 107
Query: 138 DRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHW 197
RD+ FDYFG+KTLERSYLLK+ VVERPQ M MRV+V + DD + + Y L+S +
Sbjct: 108 KRDYQFDYFGYKTLERSYLLKVKGVVVERPQDMFMRVAVAVAGDDLEEIRELYDLLSLGY 167
Query: 198 FTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRA 257
+THATPTLFNAG QLSSCFLL M++DSI GIYDTLK CA+ISKSAGGIGL IHNIRA
Sbjct: 168 YTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCALISKSAGGIGLHIHNIRA 227
Query: 258 SGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKN 317
+G+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FA+YLEPWHADI FLDLRKN
Sbjct: 228 TGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVYLEPWHADIESFLDLRKN 287
Query: 318 QGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE 377
GKEE RARDLF ALWVPDLFMERV +D +W+LF P + GL+D +G EF Y +YE
Sbjct: 288 HGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLSDLYGAEFTQKYQEYECM 347
Query: 378 GRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSS 437
G I AR+L +I+ SQ ETGTPYML+KD+CN KSNQ+NLGTIKSSNLC EI+E S+
Sbjct: 348 GLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNLGTIKSSNLCAEIMEVST 407
Query: 438 PEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLN 497
P+ETA CNLAS+ALP++V + G FDF++L +VTK+ +NL+
Sbjct: 408 PDETAACNLASMALPKFVTDTG--------------------FDFDKLHQVTKVAIKNLD 447
Query: 498 KIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYH 557
++IDVN++P + +SN HRP+G+GIQGLAD F + LPF+S EA QLN+DI ET+Y+
Sbjct: 448 RVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDSEEALQLNRDIAETMYHA 507
Query: 558 ALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLL 617
+L+AS E+A + G Y +Y GSP+S G Q D+W PS RWDWS L+ I+ +GVRNSLL
Sbjct: 508 SLEASCEIAAQKGAYSSYDGSPISHGQFQFDLWGEQPSSRWDWSQLKRQIAAHGVRNSLL 567
Query: 618 VAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTK 677
+A MPTAST+QILGNNE FE TSNIY R+ LSGEFI++NKHL+ DL + GLW+ ++
Sbjct: 568 IAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHLVSDLEQRGLWTSKIRDA 627
Query: 678 IIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHG 737
II NGSV I IP++L+++Y+TVWEI QK ++DM+A R ++ QSQSLN+ + P
Sbjct: 628 IILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPFVCQSQSLNLWLASPTFA 687
Query: 738 KLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
++ ++HFYAW +G+KTGMYYLR++ + +A+K TV
Sbjct: 688 QINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 721
>gi|449482513|ref|XP_002189376.2| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Taeniopygia guttata]
Length = 819
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/767 (57%), Positives = 550/767 (71%), Gaps = 84/767 (10%)
Query: 98 IKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLL 157
++D+Y Y N +GK + +++ + +I++ N L+ AIIYDRDF ++YFGFKTLERSYLL
Sbjct: 83 MEDLYTYINPHNGKHSPMISKETLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLL 142
Query: 158 KMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSS 217
K++S+V ERPQHMLMRVSVGIHK D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSS
Sbjct: 143 KINSKVAERPQHMLMRVSVGIHKADIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSS 202
Query: 218 CFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQ 277
CFLLCMKDDSIEGIYDTLK+CA+ISKSAGGIGL++ IRA+GSYI GTNG+SNG+VPML+
Sbjct: 203 CFLLCMKDDSIEGIYDTLKQCALISKSAGGIGLAVSCIRATGSYIAGTNGNSNGLVPMLR 262
Query: 278 VFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFAIYLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDL
Sbjct: 263 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 322
Query: 338 FMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQ 397
FM+RV + WSL CP++ GL D WG EFE LY YE +GR + V+ A++LW+ I+ SQ
Sbjct: 323 FMKRVETNQDWSLMCPNECPGLDDVWGEEFEKLYESYERQGRVRRVVKAQQLWYAIIESQ 382
Query: 398 IETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVRE 457
ETGTPYML+KDSCNRKSNQQNLGTIK SNLCTEIVE++S EE AVCNLASIAL YV
Sbjct: 383 TETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSREEVAVCNLASIALNMYV-- 440
Query: 458 KGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPI--ETTRRSNL 515
P S +DF++LAEVTK+I NLNKIID+N+YP+ + R +
Sbjct: 441 --TPEHS---------------YDFKKLAEVTKVIVRNLNKIIDINYYPVPEDLNRAQFV 483
Query: 516 RHRP------------------------IGIGIQGL--ADTFILLGLPFESPEAQQLNKD 549
R P G G+ GL ++ G +AQQL
Sbjct: 484 RGAPHAELSSEETWLPQTPRSPEALPGFWGSGLTGLRVRCSYERQGRVRRVVKAQQL--- 540
Query: 550 IFETIYYHALKASAELAVKDGPYETYFGSPMSKG-------------------------I 584
+Y +++ E PY Y S K I
Sbjct: 541 -----WYAIIESQTETGT---PYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSREEI 592
Query: 585 LQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
LQ DMWN+TPSD WDW +L+E I+K GVRNSLL++PMPTAST+QILGNNE EPYTSNIY
Sbjct: 593 LQYDMWNVTPSDLWDWKALKEKIAKYGVRNSLLISPMPTASTAQILGNNESIEPYTSNIY 652
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
TRRVLSGEF VVN HLLKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWE
Sbjct: 653 TRRVLSGEFQVVNPHLLKDLTERGLWNEEMKNQIIAHNGSIQNIPEIPDDLKQLYKTVWE 712
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I QKT++ MAADRG +IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRT+ AA
Sbjct: 713 ISQKTILKMAADRGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAA 772
Query: 765 DAIKFTVDTSVL-NNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ I+FT++ L EKA+R + + E N A +VCSL+N+EEC+ CGS
Sbjct: 773 NPIQFTLNKEKLREREKASREEEEKERNKAAMVCSLENREECLMCGS 819
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 8 GRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKV 43
GR+E V FDKIT+R++KL YGL+ + DPV V + +
Sbjct: 51 GRQERVMFDKITSRIQKLCYGLNADFVDPVNVMEDL 86
>gi|358399605|gb|EHK48942.1| hypothetical protein TRIATDRAFT_297700 [Trichoderma atroviride IMI
206040]
Length = 733
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/619 (65%), Positives = 497/619 (80%), Gaps = 18/619 (2%)
Query: 170 MLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
M+MRV+VG+ D+ + L+TYHLMS +FTHA+PTLFNAGTPQ QLSSCFL+ MKDDSIE
Sbjct: 1 MIMRVAVGVWGDNIERVLETYHLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIE 60
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
GIYDTLK CA+ISK AGGIGL++H IRA+GSYI GTNG+SNGI+PML+VFN+TARYVDQG
Sbjct: 61 GIYDTLKTCAMISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQG 120
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G KR GAFAIYLEPWHAD+FEFLDLRKN GKEE RARDLF ALW+PDLFM+RV + W+
Sbjct: 121 GNKRPGAFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNLDWT 180
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD 409
L CP++ GLAD +G EFE LY +YE+EG+ + I A+KLW+ IL +Q ETG P+ML+KD
Sbjct: 181 LMCPNECPGLADCYGEEFEALYEKYEKEGKGRKTIRAQKLWYSILEAQTETGNPFMLYKD 240
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
+CNRKSNQ+NLGTI+SSNLCTEIVE+S+P+E AVCNLAS+ALP +V
Sbjct: 241 ACNRKSNQKNLGTIRSSNLCTEIVEYSAPDEVAVCNLASLALPAFV-------------- 286
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
D +DF++L +VTK++ NLN+IIDVN+YP++ R SN RHRPIG+G+QGLAD
Sbjct: 287 ----DYNEGCYDFKKLHDVTKVVVRNLNRIIDVNYYPVQEARNSNSRHRPIGVGVQGLAD 342
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
F+ L LPFESPEA++LNK IFETIY+ AL+AS E+A +GPYE++ GSP S+GILQ D+
Sbjct: 343 AFLALRLPFESPEARELNKQIFETIYHAALEASMEIAKIEGPYESFKGSPASEGILQFDL 402
Query: 590 WNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL 649
W++ P+D W+W SL+E I ++G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL
Sbjct: 403 WDVKPTDLWEWDSLKEQIKEHGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVL 462
Query: 650 SGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKT 709
+GEF VVN LLKDL + GLWS A+K +II ENGS+ I IP ++KA+YKTVWEI Q+
Sbjct: 463 AGEFQVVNPWLLKDLVDTGLWSDAMKNRIIAENGSIQNIPNIPADIKALYKTVWEISQRH 522
Query: 710 LVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKF 769
+V M+ADRG +IDQSQSLNIHM+ P GK+TS+HF W G+KTGMYYLRT+AAA I+F
Sbjct: 523 IVQMSADRGAFIDQSQSLNIHMKDPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAAPIQF 582
Query: 770 TVDTSVLNNEKANRADNDV 788
TVD L AN + + V
Sbjct: 583 TVDQEALKVADANVSKDRV 601
>gi|422933896|ref|YP_007003955.1| ribonucleotide reductase subunit 1 [Cyprinid herpesvirus 2]
gi|386686209|gb|AFJ20561.1| ribonucleotide reductase subunit 1 [Cyprinid herpesvirus 2]
Length = 824
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/830 (51%), Positives = 582/830 (70%), Gaps = 40/830 (4%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAA 61
YV+KR G+ + + K+ R++ Y S + +P+ VA+KV AG+ G T+ +D L A
Sbjct: 14 YVVKRSGQTQAIDIQKVADRIENCGY--SSKIVNPLQVAKKVEAGIGNGFKTSAIDVLLA 71
Query: 62 ETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
+T A+MT HPDY +LA R+AVSNLHK T ++FS+ + +Y+ N + + A LV++ +
Sbjct: 72 QTLASMTTVHPDYGILASRIAVSNLHKQTPDTFSDAMWQLYHNVNPDTKENAPLVSERFF 131
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
E+ +K+ + LD A+++ RDFD +YFGFKTLE+SYLL VERPQ+M MR ++ IH D
Sbjct: 132 ELSVKHKSELDAAVVHGRDFDLNYFGFKTLEKSYLLSSSKGPVERPQYMYMRCAMQIHGD 191
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
+ ++TY LMS+ +FTHA+PTLFNA + + Q+SSCFLL +K+DS+EGI DTLK CA+I
Sbjct: 192 NIARVVETYDLMSRGYFTHASPTLFNACSTKSQMSSCFLLNVKEDSMEGIMDTLKSCAMI 251
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK AGGIG+S N+RA G+YI GTNG SNG+VP L++FN R VDQGG KR GA A+YL
Sbjct: 252 SKHAGGIGMSASNLRAGGAYIKGTNGRSNGLVPTLRIFNALERMVDQGGNKRPGALAVYL 311
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWHADIFEFLDLRKN G EE R RDLF ALW+PDLFM+RV+D+ WSL CP+ GL +
Sbjct: 312 EPWHADIFEFLDLRKNNGVEEQRTRDLFQALWIPDLFMQRVKDNKHWSLMCPARCPGLDE 371
Query: 362 SWGIEFEHLYSQYEE-EGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
++G +F+ LY+ YE+ EG K +SAR+LW +IL +Q+ETG P+ML+KD+ NRKSN +L
Sbjct: 372 AYGEKFDMLYTGYEKTEGAVKRTVSARELWDKILVAQLETGGPFMLYKDAANRKSNHNHL 431
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEI+++++ +E AVCNLAS+AL +V P+ D +F
Sbjct: 432 GTIKCSNLCTEIIQYTNKDEVAVCNLASVALNAFVE----PLH----------DGGELVF 477
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
+ ++L EV K+IT NLN +IDVN YP+ SN RHRPIGIG+QGLAD F +L +PF S
Sbjct: 478 NHQKLTEVVKVITLNLNNLIDVNFYPVPEAAASNRRHRPIGIGVQGLADVFQMLRMPFTS 537
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD---R 597
PEA++LNK IFETIY+ AL S A GPYE+Y GSP+SKG+LQ DMW ++ D
Sbjct: 538 PEAKRLNKMIFETIYHAALTQSCAQAELYGPYESYDGSPVSKGLLQFDMWGLSERDLGGH 597
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
DW++LR+ I++ G+RNSLLVAPMPTAST+QILGNNE EP+TSN+Y RRVLSG+F VVN
Sbjct: 598 CDWNTLRKSINRFGLRNSLLVAPMPTASTAQILGNNESIEPFTSNLYQRRVLSGDFQVVN 657
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
KH++K L E GLW+ ++T+++ GSV I+ P ELK ++KT +E+ QK L+DMAADR
Sbjct: 658 KHMVKVLEERGLWTDEMRTELLVNKGSVQAIASFPSELKDVFKTAYELPQKDLIDMAADR 717
Query: 718 GCYIDQSQSLNIHM--EQPD--HGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV-- 771
++DQSQSLN+ + PD KLT +H +AWS+G+KTGMYYLRT+AA ++F+V
Sbjct: 718 APFVDQSQSLNLFLCENDPDLKMKKLTRMHMHAWSRGLKTGMYYLRTKAAVAPVQFSVAP 777
Query: 772 -----------DTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
D S NN + A ++VC+ + C+ C S
Sbjct: 778 EVAAAASKRKRDASDTNNGTKSPKKQSTAAAALEIVCT---DDVCVMCSS 824
>gi|269105082|ref|ZP_06157777.1| ribonucleoside-diphosphate reductase alpha subunit [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268160717|gb|EEZ39215.1| ribonucleoside-diphosphate reductase alpha subunit [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 729
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/737 (55%), Positives = 532/737 (72%), Gaps = 30/737 (4%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSF 94
+P+ VAQ+V +G+Y G+ T++D AETAA++ HPDYA LA RV VS+L K T
Sbjct: 9 EPIAVAQRVVSGLYDGIKVTEIDVFLAETAASLATEHPDYAKLAARVMVSSLQKETSGYA 68
Query: 95 SETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERS 154
+ T R + +++ + + KN L+ I Y RD+ FDYFG+KTLERS
Sbjct: 69 TAT----------RELSEIGILSSAYVDFVAKNQFALEDMIDYKRDYQFDYFGYKTLERS 118
Query: 155 YLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQ 214
YLLK+ VVERPQ M MRV+V + DD + + Y L+S ++THATPTLFNAG Q
Sbjct: 119 YLLKVKGVVVERPQDMFMRVAVAVAGDDLEEIRELYDLLSLCYYTHATPTLFNAGCKMQQ 178
Query: 215 LSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVP 274
LSSCFLL M++DSI GIYDTLK CA+ISKSAGGIGL IHNIRA+G+ I GTNG SNGIVP
Sbjct: 179 LSSCFLLAMQEDSINGIYDTLKDCALISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVP 238
Query: 275 MLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWV 334
ML+VFN+TARYVDQGGGKRKG+FA+YLEPWHADI FLDLRKN GKEE RARDLF ALWV
Sbjct: 239 MLKVFNETARYVDQGGGKRKGSFAVYLEPWHADIESFLDLRKNHGKEEFRARDLFLALWV 298
Query: 335 PDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEIL 394
PDLFMERV D +W+LF P + GL+D +G EF Y +YE G I AR+L +I+
Sbjct: 299 PDLFMERVETDAEWTLFSPHNTKGLSDLYGAEFTQKYQEYERMGLGVKTIKARQLMTQII 358
Query: 395 NSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRY 454
SQ ETGTPYML+KD+CN KSNQ+NLGTIKSSNLC EI+E S+P+ETA CNLAS+ALP++
Sbjct: 359 ESQAETGTPYMLYKDACNEKSNQKNLGTIKSSNLCAEIMEVSTPDETAACNLASLALPKF 418
Query: 455 VREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSN 514
V G FDF++L +VTK+ +NL+++IDVN++P + +SN
Sbjct: 419 VTNTG--------------------FDFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSN 458
Query: 515 LRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYET 574
HRP+G+GIQGLAD F + LPF+S EA LN+DI ET+Y+ +L+AS E+A + G Y +
Sbjct: 459 HAHRPVGLGIQGLADVFFKMHLPFDSEEALLLNRDIAETMYHASLEASCEIAKQKGTYSS 518
Query: 575 YFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNE 634
Y GSP+S G Q D+W PS RWDWS L+ I+++GVRNSLL+A MPTAST+QILGNNE
Sbjct: 519 YDGSPISHGQFQFDLWCEQPSSRWDWSQLKHQIAEHGVRNSLLIAQMPTASTAQILGNNE 578
Query: 635 CFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEE 694
FE TSNIY R+ LSGEFI++NK+L+ DL + GLW+ ++ II NGSV I IP++
Sbjct: 579 AFEAQTSNIYKRQTLSGEFIIINKYLVSDLEQRGLWTSKIRDAIILNNGSVQGIDAIPDD 638
Query: 695 LKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTG 754
L+++Y+TVWEI QK ++DM+A R ++ QSQSLN+ + P ++ ++HFYAW +G+KTG
Sbjct: 639 LQSVYRTVWEISQKVIIDMSAARAPFVCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTG 698
Query: 755 MYYLRTRAAADAIKFTV 771
MYYLR++ + +A+K TV
Sbjct: 699 MYYLRSKPSTNAVKVTV 715
>gi|406707527|ref|YP_006757879.1| ribonucleoside-diphosphate reductase subunit alpha [alpha
proteobacterium HIMB59]
gi|406653303|gb|AFS48702.1| ribonucleoside-diphosphate reductase, alpha subunit [alpha
proteobacterium HIMB59]
Length = 912
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/775 (53%), Positives = 549/775 (70%), Gaps = 34/775 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KRDG KE + +KIT R+ LS GL DP+ +AQK G+Y G+TT ++D
Sbjct: 145 MAVTKRDGHKEDISLEKITNRISVLSNGL---EIDPITIAQKAIQGLYDGITTNEIDTYL 201
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAA+TV HPDY+ LAGR+ + LHK T F K+++ + L+ ++
Sbjct: 202 AETAAALTVEHPDYSYLAGRIKANALHKETP-GFIIATKNLF---------EDGLLREEY 251
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+ M +A ++ I YDRD+ FDYF TL R+YLL+ +++ +ERPQ + MRV++ +
Sbjct: 252 YQKAMAHAEDIEKIIDYDRDYLFDYFALTTLFRAYLLQFNNKTIERPQDLWMRVALCVSG 311
Query: 181 DDTD--SALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
D D KTY +SQ +THATPTLFN+G QLSSCFL+ M+DDSIEGI++T+K C
Sbjct: 312 DKFDFYQVKKTYDSLSQGLYTHATPTLFNSGLKMQQLSSCFLIGMEDDSIEGIFNTVKDC 371
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIGL HNIRA GS I TNG SNG++P L++FN+TAR VDQGGGKRKG+FA
Sbjct: 372 ALISKTAGGIGLHAHNIRAGGSRIKSTNGKSNGLIPFLKIFNETARSVDQGGGKRKGSFA 431
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
+YLEPWHADI FL+LRKN G EE RARDLFYALW+PDLFM+RV +DG+W+L + G
Sbjct: 432 VYLEPWHADIEAFLELRKNTGAEEFRARDLFYALWIPDLFMQRVEEDGEWTLMSEHECPG 491
Query: 359 LADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQ 418
L++++G EF LY++YE+E + AR L +I+ +QIETG PYML+KDS N KSNQ+
Sbjct: 492 LSNTYGSEFVELYTKYEKEMPDLKRVKARALMSKIIEAQIETGQPYMLYKDSINNKSNQK 551
Query: 419 NLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNR 478
N+G IKSSNLC EIVE+S +ETAVCNLASIALP++V E G
Sbjct: 552 NIGVIKSSNLCAEIVEYSEKDETAVCNLASIALPKFVTEDGK------------------ 593
Query: 479 LFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
+D++ L ++ K+ T+NL+++ID+N YP + T+ SN RHRPIG+GIQGLAD + + L +
Sbjct: 594 -YDYQNLYQIAKLATKNLDQVIDINFYPTDKTQNSNSRHRPIGLGIQGLADVYFKMNLAY 652
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW 598
+S +AQ +NK IFETIY+ AL+AS ELA G Y T+ GSP+S+G Q D+W + PS+ W
Sbjct: 653 DSVQAQIINKQIFETIYFGALEASMELAADKGAYSTFQGSPLSQGQFQFDLWGVKPSNMW 712
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
DW L E I K+GVRNSL A MPTAST ILGN E F+ TSNIY R+ LSGEF++VN+
Sbjct: 713 DWKGLMEKIQKHGVRNSLTTACMPTASTGIILGNTETFQVQTSNIYKRQTLSGEFLLVNR 772
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
+L+K+L GLWS L+ +II ENGSV I PE+LK +YKTVWE QKT++DMAA+R
Sbjct: 773 YLVKELMARGLWSKELRDQIILENGSVQNIEGFPEDLKEVYKTVWETSQKTVIDMAAERA 832
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDT 773
+IDQ+QS+N+ + P GK+ S+H YAW KG+KTGMYYLR+R+A DA+K TV +
Sbjct: 833 PFIDQTQSMNLWLATPTFGKVNSMHMYAWKKGLKTGMYYLRSRSAVDAVKVTVSS 887
>gi|322511018|gb|ADX06331.1| putative ribonucleotide reductase large subunit A [Organic Lake
phycodnavirus 2]
Length = 831
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/828 (51%), Positives = 577/828 (69%), Gaps = 71/828 (8%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLS--YGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDEL 59
YVIKR+ RKE + +DKI R KKL Y L ++ VL K+ +Y + T ++DEL
Sbjct: 3 YVIKRNERKELLSYDKILERTKKLGDKYNLEIQYSGLVL---KIIDQLYNNIKTCEIDEL 59
Query: 60 AAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADD 119
AE A+M H DY+ LAG + VSN HK TK++ E+++ + Y ++
Sbjct: 60 MAEQCASMGSIHYDYSKLAGYICVSNHHKETKHTLLESVQLLSKKY----------LSTR 109
Query: 120 VYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIH 179
Y I+ K+ L+ I+Y+R+F DYFG+KTLERSYL++ +++VVE QH+ MRVS+ IH
Sbjct: 110 YYSIVEKHHKELEHMIVYERNFLIDYFGYKTLERSYLMRNNNKVVENIQHLWMRVSIEIH 169
Query: 180 KDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCA 239
++ D +TY +S+ F HATPTL+N+GT +PQLSSC+LL M+DDSI+GI++TL +CA
Sbjct: 170 GENLDKVKETYDGLSKKLFIHATPTLYNSGTRRPQLSSCYLLGMEDDSIDGIFNTLHECA 229
Query: 240 IISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAI 299
ISK AGGIGL IHN+R+ G++I GTNG SNGIVPML+VFN+TARYVDQGGGKR G+FAI
Sbjct: 230 SISKWAGGIGLHIHNVRSKGTHISGTNGKSNGIVPMLRVFNNTARYVDQGGGKRNGSFAI 289
Query: 300 YLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGL 359
YLEPWH DI EFL+LRKN G+EE RARDLFYALWVPDLFM ++ D W L CP+ GL
Sbjct: 290 YLEPWHGDIEEFLELRKNHGEEEMRARDLFYALWVPDLFMNKIEKDDDWYLMCPNQCEGL 349
Query: 360 ADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQN 419
++ +G FE LY+QY EG+ + AR+LWF+IL+SQ+ETGTPYML+KD+CN+KSNQ+N
Sbjct: 350 SELYGESFEALYNQYVSEGKYLKKMKARELWFKILDSQMETGTPYMLYKDACNKKSNQKN 409
Query: 420 LGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNV------------- 466
LGTI+SSNLC EI+E+S EE+AVCNLASI+L +V+ + NV
Sbjct: 410 LGTIRSSNLCCEIIEYSDKEESAVCNLASISLSSFVKPSKYKFKGNVNVYTKEKCKWCYY 469
Query: 467 -------------SKLVGSRDSKN---------RLF-DFERLAEVTKI------------ 491
+ L+ ++ + +LF D E++ +K+
Sbjct: 470 LKHLLDHHKIIYTTHLIPEKEYDSFLKEHTTFPQLFVDQEKIGGFSKVNELLTPWFDYKG 529
Query: 492 -------ITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQ 544
+TENLN IIDVN+YP E TR SN +HRPIGIG+QGLADTF ++ + F+S +A+
Sbjct: 530 LHKITKIVTENLNNIIDVNYYPTEKTRLSNKKHRPIGIGVQGLADTFAMMNVAFDSNDAK 589
Query: 545 QLNKDIFETIYYHALKASAELAV-KDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSL 603
Q+NKDIFET+Y+ +++ S ELA K GPY+++ GSP+S+GI Q D+WN+TPS++++W L
Sbjct: 590 QINKDIFETMYHASMEKSMELAKEKQGPYDSFDGSPLSQGIFQFDLWNVTPSNKYNWDKL 649
Query: 604 REMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKD 663
R I + G NSL +APMPTASTSQIL NNECFEP+TSN+YTRR L+GEF+V+NKHL+K+
Sbjct: 650 RNNIMEFGTYNSLCLAPMPTASTSQILSNNECFEPFTSNMYTRRTLAGEFMVINKHLMKE 709
Query: 664 LTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQ 723
L +L +W+ ++K +I+ GS+ I EIP+ +K YK VWE+ K+++DMA DRG YI Q
Sbjct: 710 LIDLNIWNSSIKNEIVKHKGSIQTIKEIPDYIKQKYKIVWEMSMKSIIDMAKDRGAYICQ 769
Query: 724 SQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
SQS+N+ +E P++ LT++H YAW G+KTGMYYLR +A A +FTV
Sbjct: 770 SQSMNLWVEDPNYKILTNMHLYAWKSGLKTGMYYLRRKAKHQAQQFTV 817
>gi|90592870|ref|YP_529823.1| RR1 [Agrotis segetum nucleopolyhedrovirus]
gi|71559320|gb|AAZ38319.1| RR1 [Agrotis segetum nucleopolyhedrovirus]
Length = 779
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/805 (50%), Positives = 567/805 (70%), Gaps = 39/805 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
++VI+RDG ++ V I A ++ L + L+K++ + +VA + G+ G+TT +L+ A
Sbjct: 3 LHVIRRDGSRKEVHLHDIKAGIETLCFNLNKQYVNAAVVALNIMKGIRPGITTEELNVYA 62
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+ A+MT H D+A+LAGR+ V +LH SFSE + +++ + LV+D++
Sbjct: 63 ADVVASMTYIHHDFAVLAGRILVDDLHNKIDASFSEVVFNLHRH---------KLVSDEL 113
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++ + ++ AI + D+ + +FG+KTLE YLLK+D++V ERPQHMLMRV++GIH
Sbjct: 114 ASVVESHGDEINEAIDHAVDYTYKFFGYKTLENGYLLKIDNQVAERPQHMLMRVALGIHG 173
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD A++TY +MS+ FTHA+PTLF+AGTP Q+ SCFLL ++ DSI+GIY+TL CA
Sbjct: 174 DDIQDAIETYRMMSRKMFTHASPTLFSAGTPMAQMCSCFLLGIRSDSIDGIYETLGDCAA 233
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK GG+G+++H +R+ G+ I+ TNG ++G+ PM++VFN+ R+VDQGG KRKGA A+Y
Sbjct: 234 ISKYGGGLGVNVHCVRSRGTRINSTNGVASGVEPMVRVFNNMVRHVDQGG-KRKGALAVY 292
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWHADI+ L+L++N G E+C+ARDL YALWVPDLFMERV +G WSL CP+ GL+
Sbjct: 293 IEPWHADIYSVLNLKRNMGAEDCKARDLMYALWVPDLFMERVNANGVWSLMCPNKCPGLS 352
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G FE LY +YEEEGR + + A+ L I+ +Q+ETG PYML+KD+CNRKSNQQNL
Sbjct: 353 DCYGSAFEELYRKYEEEGRYQQQVRAQDLHRFIVETQVETGGPYMLYKDACNRKSNQQNL 412
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLC EIV++S EETAVCNLASIA V+ V +++ F
Sbjct: 413 GTIKCSNLCAEIVQYSDAEETAVCNLASIA---------------VNSCVVVDEAR---F 454
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DFE+L +TK++ NLNKIID N YPIE+ R SN++HRPIG+GIQGLAD F+LL +P+ES
Sbjct: 455 DFEKLRHITKVVVRNLNKIIDRNRYPIESARMSNMKHRPIGVGIQGLADAFVLLRMPYES 514
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA LN+ I ETIY+ AL+AS ELA G Y ++ GSP S+GILQ DMW++ P+ WDW
Sbjct: 515 DEAMLLNRQIAETIYFGALEASCELAKTWGSYSSFQGSPASEGILQYDMWDVRPTSLWDW 574
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+L+E I K+G+RNSLLVA MPTA+T+QILGNNE FEP+TSN+Y RRVL+GEF VVN++L
Sbjct: 575 GTLKEDIKKHGLRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRRVLAGEFQVVNQYL 634
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+ DL +L L++ ++ I GS+ I IP+ +K +YKT WE+K K +++MAADR +
Sbjct: 635 IDDLIKLKLYTSEMRNAIFAHKGSIQAIDGIPDHIKRLYKTAWEMKCKRMIEMAADRNAF 694
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS------ 774
IDQSQSLN+ + +P + +TS+H Y W G+KTGMYYLRT+ AA +FTV+
Sbjct: 695 IDQSQSLNLFVAEPTYALMTSIHDYTWRSGLKTGMYYLRTKPAAHTQQFTVEQQFTVERG 754
Query: 775 -VLNNEKANRADNDVEANLAQVVCS 798
V K N D D AQ VC+
Sbjct: 755 DVCKKRKINNYDEDA----AQNVCA 775
>gi|260945435|ref|XP_002617015.1| hypothetical protein CLUG_02459 [Clavispora lusitaniae ATCC 42720]
gi|238848869|gb|EEQ38333.1| hypothetical protein CLUG_02459 [Clavispora lusitaniae ATCC 42720]
Length = 878
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/768 (54%), Positives = 548/768 (71%), Gaps = 22/768 (2%)
Query: 12 PVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNH 71
P + ++ L +L+ L + L + + + +T QL EL AET A V +
Sbjct: 13 PFQIGRLRKTLDELNRELDISSSELELSMKAIENSLPASLTVNQLLELVAETLAQRVVQN 72
Query: 72 PDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKA--SLVADDVYEIIMKNAA 129
PD+ALLAGRV + ++ + FS + N S K LV+ D E + +N+
Sbjct: 73 PDFALLAGRVEAYRVQRLVVSPFSTNFSRLENGSKTESKIKMDLGLVSKDAAEFVARNSD 132
Query: 130 CLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIH-KDDTDSALK 188
LD + +RD +F YFG +TL +SY L++D+ V E PQ++ +RV++G+H K D +AL+
Sbjct: 133 YLDKLVRPERDMNFTYFGMRTLCKSYFLQIDNVVAETPQYLFLRVAIGLHGKLDDKNALQ 192
Query: 189 ----TYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKS 244
Y LMS+ + ++PTLF+AGT LSSCFL+ +K+DSI+GI+ TL A+ISK
Sbjct: 193 RVSEIYDLMSEKYLIFSSPTLFSAGTNNNFLSSCFLMGIKEDSIDGIFKTLHSAALISKG 252
Query: 245 AGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPW 304
+GG+G+ +HNIR++GS I +NG+SNG+VPML+VFN+TARYVDQGG KR GAFAIY+EPW
Sbjct: 253 SGGLGIHVHNIRSNGSAISSSNGTSNGLVPMLKVFNNTARYVDQGGNKRPGAFAIYIEPW 312
Query: 305 HADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWG 364
H DI E L+LRKN G +E RARDLF+ALW+PDLFM+RV+++GKWSLF PS A GL+D +G
Sbjct: 313 HGDIMEVLELRKNHGPDELRARDLFFALWIPDLFMKRVKNNGKWSLFSPSKAPGLSDVYG 372
Query: 365 IEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIK 424
EFE LY +YEEE A I ARKLW IL +Q ETG P+ML+KD+CNRKSNQ NLGTIK
Sbjct: 373 EEFESLYQKYEEEDLACTTIEARKLWMHILQAQTETGMPFMLYKDACNRKSNQMNLGTIK 432
Query: 425 SSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFER 484
SSNLC EIVE+SSPEETAVCNLAS+ LP +V + ++ N FDF++
Sbjct: 433 SSNLCCEIVEYSSPEETAVCNLASLGLPTFVT---------------ANENGNVAFDFKK 477
Query: 485 LAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQ 544
L +VTKI+ +L+++IDV YPI++ + SNL+HRPI IG+QGLADTF+ L LPF+S EA
Sbjct: 478 LHKVTKILARSLDRVIDVTKYPIKSAKVSNLKHRPIAIGVQGLADTFLELRLPFDSAEAA 537
Query: 545 QLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLR 604
LN IFETIY+ A+++S EL+ + G YE++ GSP SKG LQ D+WN P DW L+
Sbjct: 538 TLNSQIFETIYHAAIESSMELSKEKGYYESFEGSPASKGKLQFDLWNYKPDFFDDWDELK 597
Query: 605 EMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDL 664
E + K G+RNSLLVA MPTASTSQILG NECFEP+TSNIY RRVLSGEF VVNK+L+KDL
Sbjct: 598 EQVKKYGLRNSLLVAAMPTASTSQILGFNECFEPFTSNIYNRRVLSGEFQVVNKYLVKDL 657
Query: 665 TELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQS 724
LG+W+ A+K II NGSV I IP++LK +YKTVWEI QK +V +AA+RG +IDQS
Sbjct: 658 RALGIWNKAVKDMIIMNNGSVQNIDIIPQKLKKLYKTVWEISQKHIVRLAAERGRFIDQS 717
Query: 725 QSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
QS+NIH+ P G LTS HF+AW +G+KTGMYYLRT+AAA AI+FTVD
Sbjct: 718 QSMNIHLMNPTFGTLTSCHFFAWEQGLKTGMYYLRTQAAARAIQFTVD 765
>gi|303391084|ref|XP_003073772.1| ribonucleoside diphosphate reductase [Encephalitozoon intestinalis
ATCC 50506]
gi|303302920|gb|ADM12412.1| ribonucleoside diphosphate reductase [Encephalitozoon intestinalis
ATCC 50506]
Length = 768
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/779 (51%), Positives = 556/779 (71%), Gaps = 29/779 (3%)
Query: 9 RKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMT 68
+ E ++ D + ++++ + L +H + + +K+ +G + +T ++ + +ETAA+M
Sbjct: 11 KSEKLKIDMVRGQIEEYTNLLKLQHVNVDELMEKIASGWCEDMTRKEIVDYCSETAASMI 70
Query: 69 VNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNA 128
HP+Y ++ R+ VS +H IT +SF E IK Y K G +++++Y+II++NA
Sbjct: 71 TKHPEYGWISSRIIVSYIHDITMDSFVEKIK----YIQKYQGT----ISEEMYKIIVENA 122
Query: 129 ACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALK 188
+D I Y++DF F+YFG TL +SYL+K+ +VERPQ + MR ++ +HK D +
Sbjct: 123 EIIDSIIDYEKDFLFNYFGILTLMKSYLIKVGEEIVERPQDVFMRTALQVHKSDFGKVKE 182
Query: 189 TYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGI 248
TY ++S+H+FTHATPTL+N+ + QL+SCFL+ ++DSIEG+Y + + AII+K +GGI
Sbjct: 183 TYEMLSRHYFTHATPTLYNSCLKEAQLASCFLITPREDSIEGVYHMINQTAIITKYSGGI 242
Query: 249 GLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADI 308
GL++H IR+ GS + T G SNGI+P++QV N T RY++QG +R G+ AIYLEPWH +I
Sbjct: 243 GLNLHGIRSKGSPLKRTGGKSNGIIPLIQVLNATKRYINQGAERRPGSIAIYLEPWHMEI 302
Query: 309 FEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFE 368
F+FLDLRKN G EE RARD+F ALW+ DLFMERV+++ +WSLFCPS A GL ++WG EF
Sbjct: 303 FDFLDLRKNTGPEEFRARDIFIALWINDLFMERVKNNEEWSLFCPSQAVGLNETWGEEFN 362
Query: 369 HLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNL 428
LY +YE+ ++ V+ A+KLW I+ +QIETGTPYM +KD+CNR SNQQ+LGTIKSSNL
Sbjct: 363 ALYCKYEKT-ISRTVVPAQKLWKAIIEAQIETGTPYMCYKDACNRLSNQQHLGTIKSSNL 421
Query: 429 CTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEV 488
C EIVE+SS EET+VCNL SI+LP +V KN+ FDFE L +V
Sbjct: 422 CAEIVEYSSGEETSVCNLGSISLPMFV--------------------KNKKFDFESLKDV 461
Query: 489 TKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNK 548
+I+T NLNK+ID N+YP+E ++RSN++HRPIGIG+QGLAD F +L LPF+S EA+ LNK
Sbjct: 462 VRILTINLNKVIDFNYYPVEESKRSNMKHRPIGIGVQGLADLFAILRLPFDSDEARNLNK 521
Query: 549 DIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMIS 608
DIFET+YY AL+ S +LA K+GP+E+Y GSP+SKGI ++ S+ WDW LRE I
Sbjct: 522 DIFETMYYSALETSCKLAEKEGPFESYEGSPISKGIFHFELAGKKASNNWDWEGLRERIK 581
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
K G RNSLL+A MPTA TSQI GNNE FEP+ SNIYTRR +GEF +VNKHL+ DL+ELG
Sbjct: 582 KYGTRNSLLIALMPTAGTSQIFGNNETFEPFISNIYTRRTHAGEFQIVNKHLINDLSELG 641
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LWS+ +K II GS+ I+ IP++++ IYKT WEIK K ++D+AADR ++DQSQSLN
Sbjct: 642 LWSYEMKNLIIENEGSIQNITTIPKKIRDIYKTAWEIKMKAVIDLAADRQVFVDQSQSLN 701
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADND 787
+ + +P + +LTS+HFY + G+KTGMYYLRTR AIKFTVD + ++ D D
Sbjct: 702 VFVAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVDKKLAEKTLSSMNDTD 760
>gi|429965375|gb|ELA47372.1| ribonucleoside-diphosphate reductase, alpha subunit [Vavraia
culicis 'floridensis']
Length = 773
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/813 (50%), Positives = 559/813 (68%), Gaps = 43/813 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLS--KEHCDPVLVAQKVCAGVYKGVTTTQLDE 58
M+V D EP+ KI L + S+GL+ +E D + K+ +G+ ++T +
Sbjct: 1 MFVRNSDKILEPLDTKKIHKMLLECSHGLNIMREELDDLF--NKIESGLCDNLSTCDIVS 58
Query: 59 LAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
LAAE AA+ +PD+ +A R+ V HK+T ++F E +K Y Y KR +
Sbjct: 59 LAAECAASAMTKNPDFGCIAARIVVREHHKVTLDTFYEKVK--YCYEQKR------YFSR 110
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ E + +N + I Y RD+D +FGFKT+E+SY+L ++SR VERPQ + MRV++GI
Sbjct: 111 EFCERVRENKDAIQAQIDYSRDYDISFFGFKTMEKSYMLSINSRTVERPQDLFMRVALGI 170
Query: 179 HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
H D A +TYHLMSQ +F HATPT+FNAGT PQLSSCFLL +++DSIEGI+ +
Sbjct: 171 HYDSLQDAFETYHLMSQKYFVHATPTMFNAGTLTPQLSSCFLLGIEEDSIEGIFKAVSDA 230
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A ISK+AGG+G+++H +R + S I T G + GI+P+ ++F T R +DQGG KR G+ A
Sbjct: 231 AKISKTAGGLGMNVHKLRGANSLIKSTGGRACGIIPVAKIFEATLRCIDQGGKKRPGSMA 290
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
IY+EPWH+DIFEFLD+RKN GKEE RARD+F ALW+PDLFM RV +D WSLF D
Sbjct: 291 IYVEPWHSDIFEFLDIRKNTGKEELRARDIFTALWIPDLFMRRVHNDENWSLFSNDDVPN 350
Query: 359 LADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQ 418
L + +G EF+ Y YE+ G A+ + A+KLW IL+SQIETGTPYM +KDS NR +NQ+
Sbjct: 351 LYNLYGDEFDKAYEMYEKNGMARRTVRAQKLWKAILSSQIETGTPYMCYKDSANRMNNQK 410
Query: 419 NLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNR 478
+LGTIK SNLC+EI+E++ E AVCNLAS+ LPR++++
Sbjct: 411 HLGTIKCSNLCSEIMEYTEENEIAVCNLASLGLPRFMQDGQ------------------- 451
Query: 479 LFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
FD+E+L VTKI+ +NLNK+IDVN YP+ TR SNL+HRPIG+G+QGLAD F++L +P+
Sbjct: 452 -FDYEKLKMVTKIVVKNLNKVIDVNLYPLPETRNSNLKHRPIGLGVQGLADVFVMLRMPY 510
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW 598
+S EA+ +N IFETI++ AL AS ELA + GPY++Y GSPMS+G+L DMWN+ P
Sbjct: 511 DSKEARAVNLRIFETIHFAALDASCELAKEYGPYDSYEGSPMSQGVLHFDMWNVVPVTNH 570
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
DW LR I+K GVRNSLLVA MPTASTSQILG NECFEP+T+NIYTRR L+GEF VVN
Sbjct: 571 DWRGLRARIAKYGVRNSLLVALMPTASTSQILGYNECFEPFTTNIYTRRTLAGEFQVVNT 630
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
+L+ DL +L LWS +K +I E GS+ +I IP+E+K +YKT WE+K ++L+D+AADR
Sbjct: 631 YLMHDLMKLNLWSDEMKNILIQEEGSIQRIEGIPDEIKRLYKTAWELKMRSLIDLAADRA 690
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN 778
Y+DQSQSLNI M QP + KLTS+HFY + +G+KTGMYYLRTR + A+KFTVD +++
Sbjct: 691 PYVDQSQSLNIFMAQPTYPKLTSMHFYGFKRGLKTGMYYLRTRPISAAVKFTVDRGMVST 750
Query: 779 EKANRADNDVEANLAQVVCSLKNQ-EECMACGS 810
K L + CS ++ +ECM+C +
Sbjct: 751 TKL----------LQKSSCSPTSEDDECMSCSA 773
>gi|429966492|gb|ELA48489.1| ribonucleoside-diphosphate reductase, alpha subunit [Vavraia
culicis 'floridensis']
Length = 773
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/813 (50%), Positives = 559/813 (68%), Gaps = 43/813 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLS--KEHCDPVLVAQKVCAGVYKGVTTTQLDE 58
M+V D EP+ KI L + S+GL+ +E D + K+ +G+ ++T +
Sbjct: 1 MFVRNSDKILEPLDTKKIHKMLLECSHGLNIMREELDDLF--NKIESGLCDNLSTCDIVS 58
Query: 59 LAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
LAAE AA+ +PD+ +A R+ V H++T ++F E +K Y Y KR +
Sbjct: 59 LAAECAASAMTKNPDFGCIAARIVVREHHRVTLDTFYEKVK--YCYEQKR------YFSR 110
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ E + +N + I Y RD+D +FGFKT+E+SY+L ++SR VERPQ + MRV++GI
Sbjct: 111 EFCERVRENKDAIQAQIDYSRDYDISFFGFKTMEKSYMLSINSRTVERPQDLFMRVALGI 170
Query: 179 HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
H D A +TYHLMSQ +F HATPT+FNAGT PQLSSCFLL +++DSIEGI+ +
Sbjct: 171 HYDSLQDAFETYHLMSQKYFVHATPTMFNAGTLTPQLSSCFLLGIEEDSIEGIFKAVSDA 230
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A ISK+AGG+G+++H +R + S I T G + GI+P+ ++F T R +DQGG KR G+ A
Sbjct: 231 AKISKTAGGLGMNVHKLRGANSLIKSTGGRACGIIPVAKIFEATLRCIDQGGKKRPGSMA 290
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
IY+EPWH+DIFEFLD+RKN GKEE RARD+F ALW+PDLFM RV +D WSLF D
Sbjct: 291 IYVEPWHSDIFEFLDIRKNTGKEELRARDIFTALWIPDLFMRRVHNDENWSLFSNDDVPN 350
Query: 359 LADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQ 418
L + +G EF+ Y YE+ G A+ + A+KLW IL+SQIETGTPYM +KDS NR +NQ+
Sbjct: 351 LYNLYGDEFDKAYEMYEKNGMARRTVRAQKLWKAILSSQIETGTPYMCYKDSANRMNNQK 410
Query: 419 NLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNR 478
+LGTIK SNLC+EI+E++ E AVCNLAS+ LPR++++
Sbjct: 411 HLGTIKCSNLCSEIMEYTEENEIAVCNLASLGLPRFMQDGQ------------------- 451
Query: 479 LFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
FD+E+L VTKI+ +NLNK+IDVN YP+ TR SNL+HRPIG+G+QGLAD F++L +P+
Sbjct: 452 -FDYEKLKMVTKIVVKNLNKVIDVNLYPLPETRNSNLKHRPIGLGVQGLADVFVMLRMPY 510
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW 598
+S EA+ +N IFETI++ AL AS ELA + GPY++Y GSPMS+G+L DMWN+ P
Sbjct: 511 DSKEARAVNLRIFETIHFAALDASCELAKEYGPYDSYEGSPMSQGVLHFDMWNVVPVTNH 570
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
DW LR I+K GVRNSLLVA MPTASTSQILG NECFEP+T+NIYTRR L+GEF VVN
Sbjct: 571 DWRGLRARIAKYGVRNSLLVALMPTASTSQILGYNECFEPFTTNIYTRRTLAGEFQVVNT 630
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
+L+ DL +L LWS +K +I E GS+ +I IP+E+K +YKT WE+K ++L+D+AADR
Sbjct: 631 YLMHDLMKLNLWSDEMKNILIQEEGSIQRIEGIPDEIKRLYKTAWELKMRSLIDLAADRA 690
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN 778
Y+DQSQSLNI M QP + KLTS+HFY + +G+KTGMYYLRTR + A+KFTVD +++
Sbjct: 691 PYVDQSQSLNIFMAQPTYPKLTSMHFYGFKRGLKTGMYYLRTRPISAAVKFTVDRGMVST 750
Query: 779 EKANRADNDVEANLAQVVCSLKNQ-EECMACGS 810
K L + CS ++ +ECM+C +
Sbjct: 751 TKL----------LQKSSCSPTSEDDECMSCSA 773
>gi|385303542|gb|EIF47607.1| ribonucleoside-diphosphate reductase large chain [Dekkera
bruxellensis AWRI1499]
Length = 830
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/789 (53%), Positives = 552/789 (69%), Gaps = 30/789 (3%)
Query: 14 RFDKITAR--LKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNH 71
RFD+ R ++KLS+GL+K++ V KV G+ +T +QL + AETAAA+T +H
Sbjct: 20 RFDRPRLRQYIEKLSHGLNKKYISTDKVLDKVXEGLPDELTVSQLIDFTAETAAALTTSH 79
Query: 72 PDYALLAGRVAVSNLHKITKNSFSETIKDMYNYY----NKRSGKKAS---LVADDVYEII 124
Y+ LA R+ +L K FS+ ++ + Y +R G KAS L+A D+YE++
Sbjct: 80 YQYSNLAARILERHLQKRVPARFSQNLEVLRAYKPGTGRRRKGLKASYKHLIARDLYELV 139
Query: 125 MKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTD 184
M + +D I+ +RDFD DYFGF+TLE+SYLLKMD E PQ +LMRV++ +H D
Sbjct: 140 MAHREEIDRQIVAERDFDIDYFGFRTLEKSYLLKMDGVCHETPQFLLMRVALSLHLDSLS 199
Query: 185 SALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKS 244
A ++Y LMS+ + HA+PTLFNAGT P LSSCFL+ ++ DS++GI+ T+ CA+ISK+
Sbjct: 200 DAFESYDLMSRRFLLHASPTLFNAGTEFPNLSSCFLVGLQSDSLDGIFRTVHGCAMISKA 259
Query: 245 AGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPW 304
AGGIG+ + N+RA+G+YI GTNG+S+GIVPML+VFN TA+YVDQGG KR GA YLEPW
Sbjct: 260 AGGIGMHLSNVRAAGTYISGTNGTSSGIVPMLRVFNSTAKYVDQGGNKRPGAICAYLEPW 319
Query: 305 HADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWG 364
HADI EFLDL+KN GKEE RARDLFYALW+PDLFM RV D WSLF A GL+D+WG
Sbjct: 320 HADIMEFLDLKKNHGKEEMRARDLFYALWIPDLFMRRVEKDQVWSLFSEDTAPGLSDTWG 379
Query: 365 IEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIK 424
EFE LY QYE+EGR + ARK+W IL SQ ETGTP++L+KD+CN K NQ+NLGTIK
Sbjct: 380 AEFESLYEQYEQEGRYLRQVKARKVWERILYSQTETGTPFLLYKDACNAKCNQKNLGTIK 439
Query: 425 SSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFER 484
SSNLC E+VE+S +E AVCNL S+ LP +V G F+ +
Sbjct: 440 SSNLCCEVVEYSCKDEIAVCNLGSVGLPMFVEXDG---------------QGGXFFNLXK 484
Query: 485 LAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQ 544
L +V +++ NLN++IDV YP++ R SN RHRP+ +G+QGLAD F L F SPE++
Sbjct: 485 LHDVVRVLVRNLNRVIDVGAYPLDECRVSNTRHRPVAVGVQGLADAFFRLRYAFGSPESR 544
Query: 545 QLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS---DRWDWS 601
+LNK IF+TIY+ AL SA+LA ++GPY T+ GSP + G+LQ DMW P+ D WDW
Sbjct: 545 RLNKAIFQTIYHAALDQSADLARQEGPYSTFRGSPAANGVLQYDMWGTEPAETRDLWDWP 604
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
L+ I + G+RNSLLVA MPTASTSQILG ECFEP TSNIYTRRVLSGE VVN +L+
Sbjct: 605 GLKXKIRRFGLRNSLLVALMPTASTSQILGFTECFEPITSNIYTRRVLSGEHQVVNSYLV 664
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
DL LGLW+ +K +II NGS+ I+ IPE K +YKTVW++ QK ++DMAADR Y+
Sbjct: 665 DDLDHLGLWNAHMKDQIIAANGSIQDIAGIPEHTKQLYKTVWDMSQKIIIDMAADRAPYV 724
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
DQSQS+N+ ++ K+TS+HFYAW KG+KTGMYYLRT+AA+ AIKFT+ ++ E+
Sbjct: 725 DQSQSMNLFLKDCTLAKMTSMHFYAWHKGLKTGMYYLRTQAASQAIKFTLSPTM---ERE 781
Query: 782 NRADNDVEA 790
+R EA
Sbjct: 782 SRXSRXXEA 790
>gi|322510749|gb|ADX06063.1| putative ribonucleotide diphosphate reductase, large subunit
[Organic Lake phycodnavirus 1]
Length = 824
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/820 (50%), Positives = 569/820 (69%), Gaps = 60/820 (7%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKK--LSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDE 58
++V+KR+ +KE + +DKI R+ K + Y L+ + VL KV ++ + T+Q+DE
Sbjct: 2 IHVLKRNSKKEVLSYDKILERVNKFIVKYNLNIQGSGLVL---KVIDQLHDNIKTSQIDE 58
Query: 59 LAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
L AE A+M H DY+ LAG + +SN HK TK + E++ N KK L +D
Sbjct: 59 LLAEQCASMGTIHYDYSKLAGYICISNHHKETKRTLFESV-------NILCTKKGYL-SD 110
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ Y I+ ++ L+ I+YDR++ DYFG+KTLER+YL++ D+ V+E QH+ MRV+V I
Sbjct: 111 NYYNIVKEHHKELETMIVYDRNYLIDYFGYKTLERAYLMRNDNMVIENIQHLWMRVAVQI 170
Query: 179 HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
H + TY +S+ F HATPTL+NAGT +PQLSSC+LL M++DSI+GI++TL+ C
Sbjct: 171 HGNCLPKVKDTYDGLSKKLFIHATPTLYNAGTTRPQLSSCYLLGMEEDSIDGIFNTLRDC 230
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A ISK AGGIGL IHN+RA G+ I GTNG+SNGIVPML+VFN+TARYVDQGGGKR G+FA
Sbjct: 231 ASISKWAGGIGLHIHNVRAKGTSILGTNGTSNGIVPMLRVFNNTARYVDQGGGKRNGSFA 290
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
+YLEPWH DI EFL+LRKN G EE RARDLFYALW+PDLFM ++ D W L CP
Sbjct: 291 MYLEPWHGDILEFLELRKNHGDEEMRARDLFYALWIPDLFMRKIEHDEDWYLMCPHICKH 350
Query: 359 LADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQ 418
L + +G EFE LY Y G+ + AR+LWF IL+SQ+ETGTPYML+KD+CN+KSNQ+
Sbjct: 351 LDNVYGEEFETLYESYVSSGQYLKKMKARELWFHILDSQMETGTPYMLYKDACNQKSNQK 410
Query: 419 NLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNV------------ 466
N+GTIKSSNLC EI+E+S +E+AVCNLASI+L +V++ + +
Sbjct: 411 NIGTIKSSNLCCEIIEYSDKDESAVCNLASISLSSFVKKSKFKLNGPIVVYAKENCKWCD 470
Query: 467 -------------------------------SKLVGSRDSKNRL---FDFERLAEVTKII 492
K+ G D + FD+ L ++TK++
Sbjct: 471 YLKSFLDSIKINYEVVMDVRQTMYPQLYAGDKKIGGFSDVISLFKSTFDYNGLHKITKMV 530
Query: 493 TENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFE 552
TENLN+IIDVN+YP + TR+SNL+HRPIGIG+QGLAD F +L + F+S EA+++NK IFE
Sbjct: 531 TENLNRIIDVNYYPTDKTRQSNLKHRPIGIGVQGLADVFAMLNIAFDSDEAKEINKMIFE 590
Query: 553 TIYYHALKASAELAV-KDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNG 611
T+Y+ +L+ S E+A + Y ++ GSP+S+GILQ DMWN+TPS R+DW +L++ I K G
Sbjct: 591 TMYHASLEKSMEMAKEQQTQYASFKGSPLSEGILQFDMWNVTPSKRYDWGALKQNIIKYG 650
Query: 612 VRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWS 671
NSL +APMPTASTSQIL NNECFEP+TSN+YTRR L+GEF+V+NKHL+K+L +L +W+
Sbjct: 651 TMNSLCMAPMPTASTSQILSNNECFEPFTSNMYTRRTLAGEFMVINKHLMKELIDLNIWN 710
Query: 672 HALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHM 731
++K I+ GS+ I+EIP+ +KA YK VWE+ KT++DM+ DRG YI QSQS+N+ +
Sbjct: 711 MSIKNDILKYKGSIQSIAEIPDYIKAKYKIVWEMSMKTIMDMSKDRGAYICQSQSMNLWV 770
Query: 732 EQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
E+P++ LT++H YAW G+KTGMYYLR +A A +FTV
Sbjct: 771 EEPNYKTLTNMHLYAWKCGLKTGMYYLRRKAKHHAQQFTV 810
>gi|396082286|gb|AFN83896.1| ribonucleoside diphosphate reductase [Encephalitozoon romaleae
SJ-2008]
Length = 769
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/769 (51%), Positives = 548/769 (71%), Gaps = 29/769 (3%)
Query: 4 IKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAET 63
I + + E V D + ++++ + L+ +H + + K+ +G +G+T ++ + +ET
Sbjct: 7 INKRIKSEKVGIDGVRGQIEEYAKTLNLKHVNVSELMDKIISGWCEGMTKKEVVDYCSET 66
Query: 64 AAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEI 123
AA+M HP+Y ++ R+ VS +H++T NSFSE IK Y + G +++++Y I
Sbjct: 67 AASMITKHPEYGRISSRIIVSYIHEVTMNSFSEKIK----YIQEHRGT----ISEEMYGI 118
Query: 124 IMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDT 183
I+++ +D I Y+ D+ F+YFG TL +SY++++ +VERPQ + MR ++ IHK +
Sbjct: 119 ILEHKETIDAMINYENDYLFNYFGMLTLMKSYMIRVGDEIVERPQDVFMRTALQIHKTNF 178
Query: 184 DSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISK 243
+TY ++S+H+FTHATPTL+N+ PQL+SCFL+ K+DSIEG+Y T+ + AII+K
Sbjct: 179 KRVKETYDMLSRHYFTHATPTLYNSCLKNPQLASCFLITPKEDSIEGVYHTINQTAIITK 238
Query: 244 SAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEP 303
+GGIGL++H+IRA GS + T G SNGI+P++QVFN T RY++QG +R G+ AIYLEP
Sbjct: 239 FSGGIGLNLHSIRAKGSALKNTGGKSNGIIPLIQVFNATKRYINQGAERRPGSIAIYLEP 298
Query: 304 WHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSW 363
WH +IF+FLD+RK+ G EE RARD+F ALWV DLFMERV++D +WSLFCPS A GL D W
Sbjct: 299 WHMEIFDFLDIRKSTGPEEFRARDIFIALWVNDLFMERVKNDEEWSLFCPSQAVGLEDMW 358
Query: 364 GIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTI 423
G EF LY +YE+ ++ V+ A+KLW I+ +QIETGTPYM +KD+CNR SNQQ+LG I
Sbjct: 359 GEEFNELYCKYEKT-ISRTVVPAQKLWKAIIEAQIETGTPYMCYKDACNRLSNQQHLGII 417
Query: 424 KSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFE 483
KSSNLCTEIVE+SS +E +VCNLASI+LP +V KN +FDFE
Sbjct: 418 KSSNLCTEIVEYSSGDEVSVCNLASISLPMFV--------------------KNGMFDFE 457
Query: 484 RLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEA 543
V +IIT NLNK+ID ++YP+E + SN++HRPIGIG+QGLAD F +L LPFES EA
Sbjct: 458 SFRNVVRIITINLNKVIDSSYYPVEEAKTSNMKHRPIGIGVQGLADLFAILKLPFESDEA 517
Query: 544 QQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSL 603
+ LNK+IFE +YY AL+AS ELA +GP+ +Y GSP+SKGI ++ S++WDW L
Sbjct: 518 RSLNKEIFEAMYYFALEASCELAESEGPFPSYKGSPISKGIFHFELAGKKASNKWDWEGL 577
Query: 604 REMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKD 663
RE I K+G RNSLL+A MPTA TSQI GNNE FEPY SNIYTRR +GEF +VN++L+ D
Sbjct: 578 RERIKKHGTRNSLLIALMPTAGTSQIFGNNEAFEPYASNIYTRRTHAGEFQIVNQYLIDD 637
Query: 664 LTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQ 723
L +LGLWS+ +K II GS+ I IP +++ IYKT WEIK ++++D+AADR +IDQ
Sbjct: 638 LVKLGLWSYEMKNLIIENEGSIQNIISIPPKIREIYKTAWEIKMRSVIDLAADRQAFIDQ 697
Query: 724 SQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
SQSLNI + +P + +LTS+HFY + G+KTGMYYLRTR AIKFTVD
Sbjct: 698 SQSLNIFIAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVD 746
>gi|449329866|gb|AGE96134.1| ribonucleoside diphosphate reductase [Encephalitozoon cuniculi]
Length = 768
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/779 (51%), Positives = 545/779 (69%), Gaps = 29/779 (3%)
Query: 9 RKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMT 68
+ E + D I +R++ L H D + +++ +G + +T + + +ETAA+M
Sbjct: 11 KSEKLGIDLIRSRIEGYVKDLKLRHVDVDELVERIVSGWCEDMTRKETIDYCSETAASMI 70
Query: 69 VNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNA 128
HP+Y ++ R+ VS +H+IT +SF E IK Y K G +V++++Y II+++
Sbjct: 71 TKHPEYGQISSRIIVSYIHEITMDSFVEKIK----YIQKHRG----MVSEEMYGIILEHG 122
Query: 129 ACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALK 188
++G I Y+ DF F YFG TL +SYL+K+ ++ERPQ M MRV++ IHK D + +
Sbjct: 123 ETIEGMINYENDFLFSYFGILTLMKSYLIKVGEEIIERPQDMFMRVALQIHKTDFEKVRE 182
Query: 189 TYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGI 248
Y+L+S H+FTHATPTL+N+ PQL+SCFL+ ++DSIEG+Y + + AII+K +GGI
Sbjct: 183 VYNLLSGHYFTHATPTLYNSCLKNPQLASCFLITPREDSIEGVYHMINQAAIITKYSGGI 242
Query: 249 GLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADI 308
GL++H IR+ GS + T G SNGI+P++QV N T RY++QG +R G+ AI+LEPWH +I
Sbjct: 243 GLNLHGIRSKGSSLRSTGGRSNGIIPLIQVLNATKRYINQGAERRPGSIAIFLEPWHMEI 302
Query: 309 FEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFE 368
F+FL+LRKN G EE RARD+F ALW+ DLFMERV+++ +WSLFCPS A GL+D WG EF
Sbjct: 303 FDFLELRKNTGPEEFRARDIFTALWINDLFMERVKNNEEWSLFCPSQAVGLSDVWGEEFN 362
Query: 369 HLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNL 428
LY +YE+ ++ V+ A+KLW I+ +QIETGTPYM +KD+CNR SNQQ+LGTIKSSNL
Sbjct: 363 ALYCKYEKT-ISRTVVPAQKLWKAIIEAQIETGTPYMCYKDACNRLSNQQHLGTIKSSNL 421
Query: 429 CTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEV 488
C EIVE+SS EET+VCNLASI LP +V++ G FDFE V
Sbjct: 422 CAEIVEYSSGEETSVCNLASICLPMFVKDGG--------------------FDFEAFRRV 461
Query: 489 TKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNK 548
KI+T NLN++ID N+YP+E RRSN+R+RPIGIG+QGLAD F +L L FES A+ LN+
Sbjct: 462 VKILTVNLNRVIDFNYYPVEEARRSNMRNRPIGIGVQGLADLFAILRLAFESDGARSLNQ 521
Query: 549 DIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMIS 608
DIFE +YY A++AS ELA K+GP+ +Y GSP+SKGI ++ S WDW LRE I
Sbjct: 522 DIFEAMYYSAMEASCELAEKEGPFPSYEGSPISKGIFHFELAGRKASGNWDWEGLRERIR 581
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
++GVRNSLL+A MPTA TSQI GNNE FEP+ SNIYTRR +GEF +VN+HL+ DL LG
Sbjct: 582 RHGVRNSLLIALMPTAGTSQIFGNNEAFEPHASNIYTRRTHAGEFQIVNQHLVNDLVRLG 641
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LWS+ +K +I GS+ I+ IP E++ IYKT WEIK K+++D+AADR ++DQSQSLN
Sbjct: 642 LWSYEMKNLVIENEGSIQNITSIPHEIREIYKTAWEIKMKSVIDLAADRQVFVDQSQSLN 701
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADND 787
I + +P + +LTS+HFY + G+KTGMYYLRTR AIKFTVD + ++ D D
Sbjct: 702 IFIAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVDKKLAEKTLSSMNDTD 760
>gi|401827749|ref|XP_003888167.1| ribonucleoside-diphosphate reductase [Encephalitozoon hellem ATCC
50504]
gi|392999367|gb|AFM99186.1| ribonucleoside-diphosphate reductase [Encephalitozoon hellem ATCC
50504]
Length = 769
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/764 (51%), Positives = 546/764 (71%), Gaps = 29/764 (3%)
Query: 9 RKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMT 68
R E + + + ++++ + L +H D + K+ +G + +T ++ + +ETAA+M
Sbjct: 11 RTEKLGIEGVRGQIEEYARILDLKHVDVNELMDKIISGWCEDMTRKEVMDYCSETAASMI 70
Query: 69 VNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNA 128
HP+Y ++ R+ VS +H++T +SFSE IK Y K G +++++YEII++N
Sbjct: 71 TKHPEYGRISSRIVVSYIHEVTMDSFSEKIK----YIQKHRGT----ISEEMYEIILENK 122
Query: 129 ACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALK 188
+D I Y+ DF F YFG TL +SYL+++ +VERPQ + MR ++ IHK D + +
Sbjct: 123 ETIDAMINYENDFLFSYFGILTLMKSYLIRVGDEIVERPQDVFMRTALQIHKTDFERVKE 182
Query: 189 TYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGI 248
TY ++S+H+FTHATPTL+N+ PQL+SCFL+ K+DSIEG+Y + + AII+K +GGI
Sbjct: 183 TYDMLSEHYFTHATPTLYNSCLKNPQLASCFLISPKEDSIEGVYHMVNQAAIITKYSGGI 242
Query: 249 GLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADI 308
GL++H+IR+ GS + T G SNGIVP++QVFN T RY++QG +R G+ AIYLEPWH +I
Sbjct: 243 GLNLHSIRSKGSPLKNTGGRSNGIVPLIQVFNATKRYINQGAERRPGSIAIYLEPWHMEI 302
Query: 309 FEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFE 368
F+FLD+RKN G E+ RARD+F ALWV DLFMERV+++ +WSLFCPS A GL + WG EF
Sbjct: 303 FDFLDIRKNTGPEDLRARDMFIALWVNDLFMERVKNNEEWSLFCPSQAVGLDEVWGEEFN 362
Query: 369 HLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNL 428
LY +YE+ ++ V+ A+KLW I+ +QIETGTPYM +KD+CNR SN Q+LGTIKSSNL
Sbjct: 363 ALYCKYEKT-ISRTVVPAQKLWKAIIEAQIETGTPYMCYKDACNRLSNMQHLGTIKSSNL 421
Query: 429 CTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEV 488
C EIVE+SS +ET+VCNLASI+LP++V KN +FDFE +
Sbjct: 422 CAEIVEYSSGDETSVCNLASISLPKFV--------------------KNGVFDFESFRSI 461
Query: 489 TKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNK 548
+IIT NLN++ID ++YPIE + SN+RHRPIGIG+QGLAD F +L PFES EA++LNK
Sbjct: 462 VRIITINLNRVIDWSYYPIEEAKTSNMRHRPIGIGVQGLADLFAILRFPFESDEARKLNK 521
Query: 549 DIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMIS 608
+IFE +YY AL+AS ELA +GP+E+Y GS +SKGI ++ S++WDW LRE I
Sbjct: 522 EIFEAMYYSALEASCELAEAEGPFESYEGSSISKGIFHFELAGKKASNKWDWEGLRERIK 581
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
+ G RNSLL+A MPT+ TSQI GNNE FEPY SNIYTRR +GEF +VN++L+ DL +LG
Sbjct: 582 RYGTRNSLLIALMPTSGTSQIFGNNEAFEPYASNIYTRRTHAGEFQIVNQYLIDDLVKLG 641
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LWS+ +K I+ GS+ I+ IP +++ IYKTVWEIK K+++D+AADR +IDQSQSLN
Sbjct: 642 LWSYEMKNLIVENEGSIQNITSIPSKIREIYKTVWEIKMKSVIDLAADRQAFIDQSQSLN 701
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
I + +P + +LTS+HFY + G+KTGMYYLRTR AIKFTVD
Sbjct: 702 IFIAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVD 745
>gi|19074701|ref|NP_586207.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE [Encephalitozoon cuniculi
GB-M1]
gi|51701818|sp|Q8SR37.1|RIR1_ENCCU RecName: Full=Ribonucleoside-diphosphate reductase large chain;
AltName: Full=Ribonucleotide reductase
gi|19069343|emb|CAD25811.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE [Encephalitozoon cuniculi
GB-M1]
Length = 768
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/779 (51%), Positives = 544/779 (69%), Gaps = 29/779 (3%)
Query: 9 RKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMT 68
+ E + D I +R++ L H D + +++ +G + +T + + +ETAA+M
Sbjct: 11 KSEKLGIDLIRSRIEGYVKDLKLRHVDVDELVERIVSGWCEDMTRKETIDYCSETAASMI 70
Query: 69 VNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNA 128
HP+Y ++ R+ VS +H+IT +SF E IK Y K G +V++++Y II+++
Sbjct: 71 TKHPEYGQISSRIIVSYIHEITMDSFVEKIK----YIQKHRG----MVSEEMYGIILEHG 122
Query: 129 ACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALK 188
++G I Y+ DF F YFG TL +SYL+K+ ++ERPQ M MRV++ IHK D + +
Sbjct: 123 ETIEGMINYENDFLFSYFGILTLMKSYLIKVGEEIIERPQDMFMRVALQIHKTDFEKVRE 182
Query: 189 TYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGI 248
Y+L+S H+FTHATPTL+N+ PQL+SCFL+ ++DSIEG+Y + + AII+K +GGI
Sbjct: 183 VYNLLSGHYFTHATPTLYNSCLKNPQLASCFLITPREDSIEGVYHMINQAAIITKYSGGI 242
Query: 249 GLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADI 308
GL++H IR+ GS + T G SNGI+P++QV N T RY++QG +R G+ AI+LEPWH +I
Sbjct: 243 GLNLHGIRSKGSSLRSTGGRSNGIIPLIQVLNATKRYINQGAERRPGSIAIFLEPWHMEI 302
Query: 309 FEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFE 368
F+FL+LRKN G EE RARD+F ALW+ DLFMERV+++ +WSLFCPS A GL+D WG EF
Sbjct: 303 FDFLELRKNTGPEEFRARDIFTALWINDLFMERVKNNEEWSLFCPSQAVGLSDVWGEEFN 362
Query: 369 HLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNL 428
LY +YE+ ++ V+ A+KLW I+ +QIETGTPYM +KD+CNR SNQQ+LGTIKSSNL
Sbjct: 363 ALYCKYEKT-ISRTVVPAQKLWKAIIEAQIETGTPYMCYKDACNRLSNQQHLGTIKSSNL 421
Query: 429 CTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEV 488
C EIVE+SS EET+VCNLASI LP +V K+ FDFE V
Sbjct: 422 CAEIVEYSSGEETSVCNLASICLPMFV--------------------KDGWFDFEAFRRV 461
Query: 489 TKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNK 548
KI+T NLN++ID N+YP+E RRSN+R+RPIGIG+QGLAD F +L L FES A+ LN+
Sbjct: 462 VKILTVNLNRVIDFNYYPVEEARRSNMRNRPIGIGVQGLADLFAILRLAFESDGARSLNQ 521
Query: 549 DIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMIS 608
DIFE +YY A++AS ELA K+GP+ +Y GSP+SKGI ++ S WDW LRE I
Sbjct: 522 DIFEAMYYSAMEASCELAEKEGPFPSYEGSPISKGIFHFELAGRKASGNWDWEGLRERIR 581
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
++GVRNSLL+A MPTA TSQI GNNE FEP+ SNIYTRR +GEF +VN+HL+ DL LG
Sbjct: 582 RHGVRNSLLIALMPTAGTSQIFGNNEAFEPHASNIYTRRTHAGEFQIVNQHLVNDLVRLG 641
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LWS+ +K +I GS+ I+ IP E++ IYKT WEIK K+++D+AADR ++DQSQSLN
Sbjct: 642 LWSYEMKNLVIENEGSIQNITSIPHEIREIYKTAWEIKMKSVIDLAADRQVFVDQSQSLN 701
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADND 787
I + +P + +LTS+HFY + G+KTGMYYLRTR AIKFTVD + ++ D D
Sbjct: 702 IFIAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVDKKLAEKTLSSMNDTD 760
>gi|300706935|ref|XP_002995698.1| hypothetical protein NCER_101343 [Nosema ceranae BRL01]
gi|239604894|gb|EEQ82027.1| hypothetical protein NCER_101343 [Nosema ceranae BRL01]
Length = 738
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/759 (52%), Positives = 533/759 (70%), Gaps = 29/759 (3%)
Query: 29 LSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK 88
+S ++ D KV G + +++ ++ +ETAA+M +P+Y L+ R+ + +LH+
Sbjct: 1 MSLQNVDKNYFIDKVYNGWCEDMSSFEMITFVSETAASMMTINPEYGKLSARILICHLHE 60
Query: 89 ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGF 148
IT N+FSE I + Y N ++ ++YEI++KN +D I Y +D+D +F
Sbjct: 61 ITFNTFSEKIIYLQKYRN--------IINPEIYEIVVKNREIIDDIIDYTKDYDLTFFSI 112
Query: 149 KTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNA 208
+L +SYL +++ V+ERPQ + MRV++ IH+D+ + +TY LMS H+FTHATPTL+N+
Sbjct: 113 TSLMKSYLFRVNDEVIERPQDIFMRVALQIHRDNWEKVKETYDLMSNHYFTHATPTLYNS 172
Query: 209 GTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGS 268
T + QL+SCFLL +DSIEGIYDTLK+CA+ISK +GGIGL++H+IR +GS + T G
Sbjct: 173 CTIRSQLASCFLLSPINDSIEGIYDTLKQCAVISKHSGGIGLNLHSIRCNGSDLVSTGGK 232
Query: 269 SNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDL 328
S GI+P++QV N T +Y++QGG +R + AIYLEPWH DIF+FLDLRKN G E+ RARD+
Sbjct: 233 SRGIIPLIQVINSTKKYINQGGNRRSSSMAIYLEPWHKDIFDFLDLRKNTGSEDIRARDI 292
Query: 329 FYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARK 388
F ALW+ DLFMERV + +WSLFCP++A GL D WG +F LY++YE + + V+ ARK
Sbjct: 293 FTALWINDLFMERVDKNEEWSLFCPNEAKGLDDVWGEDFNKLYTKYER-TKNRTVVKARK 351
Query: 389 LWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLAS 448
LW I+ +QIETGTPYML+KD+CNR SNQQNLG IKSSNLC EI+E+S E AVCNLAS
Sbjct: 352 LWKAIIEAQIETGTPYMLYKDTCNRLSNQQNLGIIKSSNLCAEIIEYSDKNEIAVCNLAS 411
Query: 449 IALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIE 508
+ L R+VRE FDFE L+++ K+IT NLN ID YP+E
Sbjct: 412 VCLSRFVREGK--------------------FDFEELSKIVKVITRNLNNCIDSTFYPVE 451
Query: 509 TTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVK 568
+RSN RHRPIGIG+QGLAD F+L+ PF+S A+ LN IFETIYY AL+ S ELA +
Sbjct: 452 ECKRSNFRHRPIGIGVQGLADAFVLMRYPFDSQNARDLNFKIFETIYYSALEESVELAKE 511
Query: 569 DGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQ 628
GPYET+ GSP+SKGI ++ + W+ LRE I K+GVRNSLLV+PMPTASTSQ
Sbjct: 512 YGPYETFAGSPLSKGIFHFELCKKKVPNLEKWNLLREKIKKHGVRNSLLVSPMPTASTSQ 571
Query: 629 ILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKI 688
I NNECFEP+TSNIYTRR +GEF +VN++LLKDL L LWSH +K II GS+ I
Sbjct: 572 IFNNNECFEPFTSNIYTRRTHAGEFQIVNQYLLKDLINLNLWSHEMKNLIIEYEGSIQNI 631
Query: 689 SEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWS 748
IP+++K +YKT WE+K K ++D+AADR +IDQSQSLN+ + QP + KL+S+HFYA+
Sbjct: 632 KSIPQDIKDLYKTAWELKMKHVIDLAADRQLFIDQSQSLNLFVAQPTYSKLSSMHFYAFK 691
Query: 749 KGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADND 787
G+KTGMYYLRTR AIKFTVD +L ++ DND
Sbjct: 692 SGLKTGMYYLRTRPITSAIKFTVDQKLLEKTMSSINDND 730
>gi|370702993|ref|YP_004956795.1| orf47 gene product [Helicoverpa zea nudivirus 2]
gi|365199590|gb|AEW69596.1| ribonuclease reductase [Helicoverpa zea nudivirus 2]
Length = 938
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/793 (50%), Positives = 561/793 (70%), Gaps = 46/793 (5%)
Query: 3 VIKRDGRKEPVRFD--KITARLKKL----SYGLSKEHCDPVLVAQKVCAGVYKGVTTTQL 56
++KR+G E RFD K+ AR+++ L+ + + V G+Y V+T +L
Sbjct: 8 IVKRNGSVE--RFDPSKLYARIERCMTMSEPRLTTAFINIAGIVADVEKGLYDRVSTLEL 65
Query: 57 DELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLV 116
D L +ET A+M+ HPD+++LA R+A+ LHK T++ FSETI+D+Y +A++V
Sbjct: 66 DTLLSETCASMSTAHPDHSILAARIAMQALHKRTRSKFSETIRDLY---------EANIV 116
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFD-FDYFGFKTLERSYLLKM-DSRVVERPQHMLMRV 174
++++ ++A LD AI+ DRDF YF +KTLER+YL+K+ D ++ ER QHM MR
Sbjct: 117 PQYYFDLVQEHADTLDSAIVDDRDFQSLTYFAYKTLERTYLIKLADGKICERVQHMYMRT 176
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
++GIH D +S ++TY+L+S ++ H+TPTL +A T + +SC+LL +K+DSI G+ DT
Sbjct: 177 ALGIHGRDIESVIETYNLLSNRYYVHSTPTLCHAATNRSNYASCYLLELKEDSIGGVMDT 236
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
LK A ISK GG+GL +H +R S IH TNG+++G+VPML+++N +RYV QGG KR
Sbjct: 237 LKDAATISKHCGGVGLHVHKLRCKNSTIHSTNGNASGLVPMLRMYNAMSRYVTQGGNKRP 296
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA A+YLEPWHAD+F+F+++RKN G EE RARDLFYALWVPDLFM+RV D G WSL CP
Sbjct: 297 GAIAVYLEPWHADVFDFIEMRKNSGFEEARARDLFYALWVPDLFMKRVNDGGYWSLMCPD 356
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
+ GL+D WG EFE Y+ YE+EGR + AR+LW I+ +Q+ETGTPY+L+KD+ NR
Sbjct: 357 SSPGLSDCWGEEFEAKYTAYEQEGRYVRRVDARELWKAIVTAQVETGTPYILYKDTVNRN 416
Query: 415 SNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRD 474
SNQ++LGTIK SNLCTEIVE++SP+ETAVC LAS+ LP++V
Sbjct: 417 SNQRHLGTIKGSNLCTEIVEYASPDETAVCVLASVNLPKFV------------------- 457
Query: 475 SKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILL 534
+ ++F+ LA+ +++T NLNKIID YPI + +SN +HRPIGIG+QG AD ++
Sbjct: 458 -EGKVFNLNLLAKTVRLVTRNLNKIIDNALYPIPSAAKSNFKHRPIGIGVQGYADALAMM 516
Query: 535 GLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP 594
G+ +E ++ QLN+DIFETIY+ AL S +LA G YE+Y GSP S+G L D +++
Sbjct: 517 GIAYE--DSMQLNRDIFETIYHAALTESCQLARVHGVYESYHGSPTSRGELHFDRYSVH- 573
Query: 595 SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFI 654
S + DWSSLR+ I++ G+RNSLLVAPMPTA+TSQ+ GN E FEP+TSN+Y RR SGEF
Sbjct: 574 SQKCDWSSLRKDIARYGLRNSLLVAPMPTATTSQVFGNAESFEPFTSNMYQRRTQSGEFQ 633
Query: 655 VVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMA 714
+ N HL++DL L LW+ + I+Y NGS+ I+ IPEEL+ IYKTVWEI KTL+DMA
Sbjct: 634 LTNVHLVRDLERLNLWNDDMAQLIMYNNGSIQNITIIPEELRRIYKTVWEIPTKTLIDMA 693
Query: 715 ADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
ADRG YIDQSQS N+++ +P + ++TS+HFYAW+KG+KTGMYYLRT++A +AI FTVD +
Sbjct: 694 ADRGVYIDQSQSFNLYVAEPTYSRMTSIHFYAWNKGLKTGMYYLRTKSATNAIPFTVDVN 753
Query: 775 ----VLNNEKANR 783
+++ KA R
Sbjct: 754 RCALLMSQMKAGR 766
>gi|22671562|gb|AAN04389.1|AF451898_94 Rr1 [Heliothis zea virus 1]
Length = 939
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/793 (50%), Positives = 561/793 (70%), Gaps = 46/793 (5%)
Query: 3 VIKRDGRKEPVRFD--KITARLKKL----SYGLSKEHCDPVLVAQKVCAGVYKGVTTTQL 56
++KR+G E RFD K+ AR+++ L+ + + V G+Y V+T +L
Sbjct: 8 IVKRNGSVE--RFDPSKLYARIERCMTMSEPRLTTAFINIAGIVADVEKGLYDRVSTLEL 65
Query: 57 DELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLV 116
D L +ET A+M+ HPD+++LA R+A+ LHK T++ FSETI+D+Y +A++V
Sbjct: 66 DTLLSETCASMSTAHPDHSILAARIAMQALHKRTRSKFSETIRDLY---------EANIV 116
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFD-FDYFGFKTLERSYLLKM-DSRVVERPQHMLMRV 174
++++ ++A LD AI+ DRDF YF +KTLER+YL+K+ D ++ ER QHM MR
Sbjct: 117 PQYYFDLVQEHADTLDSAIVDDRDFQSLTYFAYKTLERTYLIKLADGKICERVQHMYMRT 176
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
++GIH D +S ++TY+L+S ++ H+TPTL +A T + +SC+LL +K+DSI G+ DT
Sbjct: 177 ALGIHGRDIESVIETYNLLSNRYYVHSTPTLCHAATNRSNYASCYLLELKEDSIGGVMDT 236
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
LK A ISK GG+GL +H +R S IH TNG+++G+VPML+++N +RYV QGG KR
Sbjct: 237 LKDAATISKHCGGVGLHVHKLRCKNSTIHSTNGNASGLVPMLRMYNAMSRYVTQGGNKRP 296
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA A+YLEPWHAD+F+F+++RKN G EE RARDLFYALWVPDLFM+RV D G WSL CP
Sbjct: 297 GAIAVYLEPWHADVFDFIEMRKNSGFEEARARDLFYALWVPDLFMKRVNDGGYWSLMCPD 356
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
+ GL+D WG EFE Y+ YE+EGR + AR+LW I+ +Q+ETGTPY+L+KD+ NR
Sbjct: 357 SSPGLSDCWGEEFEAKYTAYEQEGRYVRRVDARELWKAIVTAQVETGTPYILYKDTVNRN 416
Query: 415 SNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRD 474
SNQ++LGTIK SNLCTEIVE++SP+ETAVC LAS+ LP++V
Sbjct: 417 SNQRHLGTIKGSNLCTEIVEYASPDETAVCVLASVNLPKFV------------------- 457
Query: 475 SKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILL 534
+ ++F+ LA+ +++T NLNKIID YPI + +SN +HRPIGIG+QG AD ++
Sbjct: 458 -EGKVFNLNLLAKTVRLVTRNLNKIIDNALYPIPSAAKSNFKHRPIGIGVQGYADALAMM 516
Query: 535 GLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP 594
G+ +E ++ QLN+DIFETIY+ AL S +LA G YE+Y GSP S+G L D +++
Sbjct: 517 GIAYE--DSMQLNRDIFETIYHAALTESCQLARVHGVYESYHGSPTSRGELHFDRYSVH- 573
Query: 595 SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFI 654
S + DWSSLR+ I++ G+RNSLLVAPMPTA+TSQ+ GN E FEP+TSN+Y RR SGEF
Sbjct: 574 SQKCDWSSLRKDIARYGLRNSLLVAPMPTATTSQVFGNAESFEPFTSNMYQRRTQSGEFQ 633
Query: 655 VVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMA 714
+ N HL++DL L LW+ + I+Y NGS+ I+ IPEEL+ IYKTVWEI KTL+DMA
Sbjct: 634 LTNVHLVRDLERLNLWNDDMAQLIMYNNGSIQNITIIPEELRRIYKTVWEIPTKTLIDMA 693
Query: 715 ADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
ADRG YIDQSQS N+++ +P + ++TS+HFYAW+KG+KTGMYYLRT++A +AI FTVD +
Sbjct: 694 ADRGAYIDQSQSFNLYVAEPTYSRMTSIHFYAWNKGLKTGMYYLRTKSATNAIPFTVDVN 753
Query: 775 ----VLNNEKANR 783
+++ KA R
Sbjct: 754 RCALLMSQMKAGR 766
>gi|255713718|ref|XP_002553141.1| KLTH0D09922p [Lachancea thermotolerans]
gi|238934521|emb|CAR22703.1| KLTH0D09922p [Lachancea thermotolerans CBS 6340]
Length = 867
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/794 (51%), Positives = 546/794 (68%), Gaps = 44/794 (5%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V R+G + + LK+L+ GL E D V++++ V T + + + E
Sbjct: 7 VSDRNGEANKLTSQALAQSLKQLAGGLQIEDADFDAVSRRILDAVPPSATHSSVVQFGGE 66
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKN-SFSETIKDMYNYYNKRSGKKA-------- 113
AAM+ HPD+A LA R +S LHK + SF+E + + RS KA
Sbjct: 67 VLAAMSTTHPDFANLAARWEISELHKKLQGLSFTENLALLQKL---RSSSKAPTVKRHKT 123
Query: 114 -------SLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM-DSRVVE 165
+L++ YE+ ++ LD AI DRDFDF YFG+KTL +SYL+K + E
Sbjct: 124 STSHNDKNLISAAFYEMALRYQTTLDAAIQPDRDFDFSYFGWKTLSKSYLIKRKNEETHE 183
Query: 166 RPQHMLMRVSVGIH--KDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCM 223
PQ + MRV++ IH + D D+ L+TY LMS+ +F HA+PTLFNAGT LSSCFL+ M
Sbjct: 184 TPQFLFMRVALAIHGPRGDIDAVLETYDLMSRKFFIHASPTLFNAGTVNQYLSSCFLVAM 243
Query: 224 KDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTA 283
+DSI+GIY TL K A+ISK++GG+G+ + N+R +G+YI G+NG+SNG+VPML+VFN+TA
Sbjct: 244 IEDSIDGIYRTLHKTAMISKASGGVGVHVSNVRGTGAYISGSNGTSNGLVPMLRVFNNTA 303
Query: 284 RYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVR 343
RYVDQGG KR GAF IYLEPWH+D+ +FL LRKNQGKEE RARDLF ALW+PDLFMERV
Sbjct: 304 RYVDQGGNKRPGAFCIYLEPWHSDVLDFLQLRKNQGKEELRARDLFLALWIPDLFMERVE 363
Query: 344 DDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTP 403
+G W LF P +A GL + +G EF+ LY YE+ + A+KLW EIL SQ+ETG P
Sbjct: 364 QNGSWCLFSPDEAPGLQECFGEEFKKLYETYEKTLAPAKKMPAQKLWSEILQSQVETGGP 423
Query: 404 YMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQ 463
+ML+KDSCN KSNQ+NLGTIKSSNLC EIV++SSP ETAVCNLAS+ALP +V+ +
Sbjct: 424 FMLYKDSCNNKSNQKNLGTIKSSNLCCEIVQYSSPSETAVCNLASVALPSFVKLQ----- 478
Query: 464 SNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIG 523
+ +FDFE L ++ K++T+NL+ +ID+ YP+E + SN ++RPI IG
Sbjct: 479 -----------REQAIFDFESLHKIVKVLTKNLDSVIDICDYPVEDAKFSNEKNRPIAIG 527
Query: 524 IQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKG 583
+QGLAD ++L +PF S A+ LNK IFETIY+ A++ S E + K GPY ++ SP+S+G
Sbjct: 528 VQGLADALMILRIPFHSESARVLNKQIFETIYHAAVETSIERSKKLGPYPSFDNSPVSRG 587
Query: 584 ILQVDMWNITPSDRW-----DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
Q D+W + D + DW +RE + ++G+RNSLLV PMPTASTSQILG E FEP
Sbjct: 588 EFQFDLWGLN-DDNYEFLFSDWKEMREKVKQHGIRNSLLVGPMPTASTSQILGFTESFEP 646
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
TSNIYTRRVLSGEF V+NK+++ D LG+W+ LK +II +NGS+ I IP LK +
Sbjct: 647 MTSNIYTRRVLSGEFTVINKYMVDDFCRLGIWNEKLKNRIIEQNGSIQGIEGIPSNLKEL 706
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y+TVWEI Q+ ++D++ADRG +IDQSQSLN+ + +P GKLTS+HFY W KG+KTGMYYL
Sbjct: 707 YRTVWEIPQRVMIDLSADRGPFIDQSQSLNLFLREPTMGKLTSMHFYGWKKGLKTGMYYL 766
Query: 759 RTRAAADAIKFTVD 772
RT+AA+ AIKFT++
Sbjct: 767 RTQAASGAIKFTIN 780
>gi|367009204|ref|XP_003679103.1| hypothetical protein TDEL_0A05600 [Torulaspora delbrueckii]
gi|359746760|emb|CCE89892.1| hypothetical protein TDEL_0A05600 [Torulaspora delbrueckii]
Length = 865
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/796 (51%), Positives = 560/796 (70%), Gaps = 44/796 (5%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+K++G + +++T++L +LS+GL++++ D V +K V T Q+ E A+
Sbjct: 2 TVKKEG---VLNVEELTSKLNELSFGLNQQYLDVGEVVRKASKAVPHSATEAQIVEYVAQ 58
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLH----------------KITKNSFSETIKDMYNYYN 106
T A++T HPDY++LA R+ ++ LH + ++ +F++ D+ +
Sbjct: 59 TLASLTSIHPDYSVLAARLEIAELHHKLRGISFTHNLEILREGSRRNFTDQKDDLRDRKR 118
Query: 107 KRSGK--KASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSR-V 163
++ + S+++ + YE+ +K+ L+ +I+ +RDF F YFG+KTL +SYL+K DS V
Sbjct: 119 SKTTRVPNKSIISPEFYEMALKHEERLNSSIVVERDFHFTYFGWKTLCQSYLIKKDSEDV 178
Query: 164 VERPQHMLMRVSVGIHK--DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLL 221
E PQ + MRV++ IH D DS ++TY LMS+ +F HA+PTLFNAGT LSSCFL+
Sbjct: 179 HETPQFLFMRVALAIHGPYSDIDSVVETYELMSKRYFIHASPTLFNAGTVNQYLSSCFLV 238
Query: 222 CMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFND 281
M +DSI+GI+ TL K A+ISK++GGIGL + NIR++G+ I G+NG S+G+VPML+VFN+
Sbjct: 239 GMIEDSIDGIFKTLHKTAMISKASGGIGLHVSNIRSNGALISGSNGVSSGLVPMLRVFNN 298
Query: 282 TARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMER 341
TARYVDQGG KR GA+ IYLEPWHADI +FL LRKN GKEE RARDLF+ALW+PDLFM R
Sbjct: 299 TARYVDQGGNKRPGAYCIYLEPWHADILDFLQLRKNHGKEEMRARDLFFALWIPDLFMRR 358
Query: 342 VRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETG 401
V +G W LF P +A GL D +G EF+ LY YE G I A+KLW EIL SQIETG
Sbjct: 359 VESNGDWCLFSPDEAPGLCDVYGKEFDDLYEHYETNGLPMKRIKAQKLWSEILQSQIETG 418
Query: 402 TPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVP 461
P+ML+KDSCN KSNQ+NLGTI+SSNLC EI+E+SS +ETAVCNLAS+ALP +V+
Sbjct: 419 GPFMLYKDSCNEKSNQKNLGTIRSSNLCCEIIEYSSKDETAVCNLASVALPSFVKHV--- 475
Query: 462 VQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIG 521
+ K +FDF++L V K+IT NL+++ID+ YP+E R SN ++RP
Sbjct: 476 ------------EGKGSIFDFKKLHSVVKLITRNLDRLIDICDYPVEDARYSNEKNRPQA 523
Query: 522 IGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMS 581
IG+QGLAD F +L + FES EA LN+ +FETIY+ A++AS ELA K G Y ++ GSP S
Sbjct: 524 IGVQGLADVFFILKISFESEEASTLNRQVFETIYHGAVEASVELAEKLGSYRSFEGSPAS 583
Query: 582 KGILQVDMWNITPSDRW----DWSSLREMISK-NGVRNSLLVAPMPTASTSQILGNNECF 636
KG+LQ D W + DW L++ ISK G+RNSLLVAPMPTASTSQILGN E F
Sbjct: 584 KGLLQFDFWEKSGEHYEYLYNDWDQLKQKISKGTGLRNSLLVAPMPTASTSQILGNTESF 643
Query: 637 EPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELK 696
EP TSN+YTRRVLSGE+I VN+++++ +LG+W+ LK KII +NGSV I +P+ +K
Sbjct: 644 EPMTSNVYTRRVLSGEYINVNRYMVEHFCQLGIWNEKLKNKIIMDNGSVQNIKGLPDSIK 703
Query: 697 AIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMY 756
+YKTVWEI Q+ L+DMA R +IDQSQSLN++++ P GKLT +HF+AW +G+KTGMY
Sbjct: 704 KLYKTVWEIPQRKLIDMARARSPFIDQSQSLNLYLKAPTMGKLTGMHFHAWRQGLKTGMY 763
Query: 757 YLRTRAAADAIKFTVD 772
YLRT+AA+ AI+FT++
Sbjct: 764 YLRTQAASAAIQFTIN 779
>gi|363756368|ref|XP_003648400.1| hypothetical protein Ecym_8305 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891600|gb|AET41583.1| Hypothetical protein Ecym_8305 [Eremothecium cymbalariae
DBVPG#7215]
Length = 870
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/786 (51%), Positives = 545/786 (69%), Gaps = 46/786 (5%)
Query: 16 DKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYA 75
+ ++ L KL+YGL E+ + K+ G+ +GV +L E+ AA+T HPD++
Sbjct: 11 ETLSKSLTKLAYGLHIEYMNIDEAVHKIMVGIPEGVMERELTMYIGESLAALTTQHPDFS 70
Query: 76 LLAGRVAVSNLH-KITKNSFSETIKDMYNYYNK----------------------RSGKK 112
+LA R+ V+ LH ++ F++ + + K R+ +
Sbjct: 71 ILAARIEVAELHGRLAGLKFTDNLSLLVASVPKEGVTGEGEDEEHPRKRQARSSNRNARM 130
Query: 113 ASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLM 172
L++ + YE+ MK+ ++ AI RD+ F YFG+KTL +SYLLK D V E PQ + M
Sbjct: 131 KPLISKEFYEMAMKHKDIINEAIDSSRDYHFSYFGWKTLCKSYLLKKDGLVHETPQQLFM 190
Query: 173 RVSVGIHK--DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
RV++ IH DD DS ++TY+LMS+ +F HA+PTLFNAGT LSSCFLL + DDSI+G
Sbjct: 191 RVALAIHGPFDDIDSVIETYNLMSKKFFIHASPTLFNAGTVHQYLSSCFLLGIIDDSIDG 250
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY+TL+K A+ISK++GG+G+ + +R SG+ I G+NG+SNG+VPML+VFN TARYVDQGG
Sbjct: 251 IYETLQKSALISKASGGLGIHVSTVRGSGALISGSNGTSNGLVPMLRVFNSTARYVDQGG 310
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KR GAF IYLEPWH+DIF+FL +RKN G EE RARDLFY LW+PDLFM RV ++ WSL
Sbjct: 311 NKRPGAFCIYLEPWHSDIFDFLQMRKNHGNEEMRARDLFYGLWIPDLFMRRVEENKDWSL 370
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDS 410
F P +A GL+D +G EF+ LY YE E + A+K+W EIL SQ ETG P+ML+KD+
Sbjct: 371 FSPDEAPGLSDCYGKEFDELYESYERELVPMKRVKAQKVWREILQSQTETGGPFMLYKDA 430
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN+KSNQ+NLGTI+SSNLC EI+E+SSPEETAVCNLAS+ALP +V G +
Sbjct: 431 CNQKSNQKNLGTIRSSNLCCEIIEYSSPEETAVCNLASVALPTFVIVSGSKIS------- 483
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
FD+ +L V K+IT+NL+++IDV YP+ +SN ++RP+ IG+QG ADT
Sbjct: 484 ---------FDYAKLHSVVKVITKNLDRVIDVCDYPVPEAEKSNKKNRPMAIGVQGFADT 534
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
++L PF+S EA +LN ++FETIY+ A++AS ELA K G YE++ GSP S+G+LQ D+W
Sbjct: 535 LMMLRFPFDSKEAARLNVNVFETIYHAAIEASVELAKKYGHYESFPGSPASQGLLQFDLW 594
Query: 591 NITPSDR----WDWSSLREMI-SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYT 645
+ + DW L+E I S G+RNSLLV PMPTASTSQILG E FEP TS IYT
Sbjct: 595 GLNKENHNFLYSDWDKLKEQITSGAGLRNSLLVGPMPTASTSQILGFTESFEPMTSMIYT 654
Query: 646 RRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEI 705
RRVLSGE+ ++NK++++D LG+W LK +II +NGS+ I IP+ LK +YKTVWE+
Sbjct: 655 RRVLSGEYTIINKYMVQDFCTLGIWDEKLKNRIILDNGSIQSIEGIPQHLKDLYKTVWEL 714
Query: 706 KQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAAD 765
QK LVD++ DR +IDQSQSLN+ +++P GKLTS+HFY+W KG+KTGMYYLRT+AA+
Sbjct: 715 PQKRLVDLSRDRAPFIDQSQSLNLFLKEPTMGKLTSMHFYSWKKGLKTGMYYLRTQAASS 774
Query: 766 AIKFTV 771
AIKFT+
Sbjct: 775 AIKFTI 780
>gi|254584212|ref|XP_002497674.1| ZYRO0F10956p [Zygosaccharomyces rouxii]
gi|238940567|emb|CAR28741.1| ZYRO0F10956p [Zygosaccharomyces rouxii]
Length = 875
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/776 (52%), Positives = 557/776 (71%), Gaps = 39/776 (5%)
Query: 21 RLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGR 80
+L++LS+GL+ ++ D + QK+ +GV V Q+ AAET A++T HPD+++LA R
Sbjct: 25 KLRELSFGLNLDYLDFDKIVQKISSGVPDDVEGWQVIRHAAETVASLTSIHPDHSILAAR 84
Query: 81 VAVSNLHKITKN-SFSETIKDMYNYYNKRS---------------GKKASLVADDVYEII 124
+ + LHK + +F+E +K + + S K +++++ ++
Sbjct: 85 LEIDELHKSLRGITFTENLKQLRSSTRVTSEGDNRVPSKRQKVMRAPKKGVISEEFLQMA 144
Query: 125 MKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS-RVVERPQHMLMRVSVGIHK--D 181
+K L+ AI+++RDF+F YFG+KTL +SYL+K ++ ++ E PQ + MRV++ IH +
Sbjct: 145 LKYEKKLNDAIVHERDFNFTYFGWKTLCQSYLIKKNADQIHETPQFLFMRVALAIHGPFE 204
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
D DS ++TY LMS+ +F HA+PTLFNAGT LSSCFL+ MK+DSIEGI+ TL+ A+I
Sbjct: 205 DIDSVIETYELMSRKYFIHASPTLFNAGTVNQYLSSCFLVGMKEDSIEGIFKTLEDTALI 264
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK++GGIG+ + NIRASG+++ G+NG+SNGIVPML+VFN+TARYVDQGG KR GA+ IYL
Sbjct: 265 SKASGGIGIHVSNIRASGAHVSGSNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAYCIYL 324
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
EPWH+D+F+FL LRKN GK+E RARDLF+ALW+PDLFM+RV+ +G+WSLF P +A GL+D
Sbjct: 325 EPWHSDVFDFLQLRKNHGKDELRARDLFFALWIPDLFMKRVQCNGEWSLFSPDEAPGLSD 384
Query: 362 SWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
+G EFE LY QYE + A+KLW EIL +Q+ETG P+ML+KDSCN KSNQ+NLG
Sbjct: 385 VYGKEFEELYEQYEATALPMKRVKAQKLWSEILQAQVETGGPFMLYKDSCNLKSNQKNLG 444
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
TIKSSNLC EIVE+SS +ETAVCNLAS+ALP +V VQ +K +FD
Sbjct: 445 TIKSSNLCCEIVEYSSKDETAVCNLASVALPTFV------VQVT---------NKGSIFD 489
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
F +L V K IT NL+++IDV YPI + SNLR+RP IG+QGLAD F++L +P+ES
Sbjct: 490 FVKLHAVVKTITRNLDRVIDVCKYPIPQAQYSNLRNRPEAIGVQGLADVFLMLRIPYESQ 549
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD----R 597
EA+ LN IFETIY+ A++ S ELA + G YET+ GSP S+G+LQ D+W + +
Sbjct: 550 EARILNTQIFETIYHAAVETSIELAEEYGAYETFQGSPASQGLLQFDLWGLNEDNYDFLY 609
Query: 598 WDWSSLREMISKN-GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVV 656
DW L+ I G+RNSLL+ PMPTASTSQILG E FEP TSN+Y RRVLSGEFI V
Sbjct: 610 RDWGELKHRIQNGRGLRNSLLLGPMPTASTSQILGYTESFEPMTSNVYARRVLSGEFINV 669
Query: 657 NKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAAD 716
N++++ +LG+W+ LK +II +NGSV I +P+ +K IY+TVWEI Q+ L+DMA D
Sbjct: 670 NQYMVDHFCQLGIWNEKLKNRIIADNGSVQNIQGLPDWIKKIYRTVWEIPQRPLIDMARD 729
Query: 717 RGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
R +IDQSQSLN+ M+ P GKLTS+HF+AW G+KTGMYYLRT+AA+ AI+FTV+
Sbjct: 730 RSPFIDQSQSLNLFMKTPTMGKLTSMHFHAWRHGLKTGMYYLRTQAASAAIQFTVN 785
>gi|387866126|ref|YP_003358255.2| ribonucleotide reductase subunit 1 [Anguillid herpesvirus 1]
gi|387866034|gb|ADA57879.2| ribonucleotide reductase subunit 1 [Anguillid herpesvirus 1]
Length = 889
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/781 (49%), Positives = 539/781 (69%), Gaps = 14/781 (1%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V K GR E K+ ++L+ LSYGL+ + D + G+Y G+TT +LD++ A
Sbjct: 6 VRKHSGRTEMWSTKKMLSKLESLSYGLNTDFVDLDRLVTATMDGLYDGITTKELDDVMAR 65
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
TAA T H DY+LLAGR+ V+++HK T +F + + N + V D++
Sbjct: 66 TAAGFTSYHFDYSLLAGRIVVNSIHKYTVGNFLQGAVLLQNMDETKPH-----VTDELVA 120
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDD 182
+ K + GAI Y RD+ F++F +TLER+YLLK++ RV+ERPQH+ MR+++GIH D
Sbjct: 121 VARKYENQIQGAIDYSRDYTFNFFAIRTLERAYLLKVNERVMERPQHLFMRIAIGIHGFD 180
Query: 183 TDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIIS 242
+S L+TY +S+ F+HA+PTLF+AGT +L+SC+L+ + DDSI GIY TL++CA I+
Sbjct: 181 LESVLETYRCLSEKRFSHASPTLFHAGTNFAKLASCYLVTLADDSIAGIYSTLQECAQIA 240
Query: 243 KSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLE 302
K +GGIG +I N+RA GS I+ TNG++NG+VPML+VFN R VDQGG KR GA A++LE
Sbjct: 241 KCSGGIGAAISNVRAEGSAINSTNGTANGLVPMLRVFNAMTRMVDQGGNKRPGAMAVWLE 300
Query: 303 PWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADS 362
PWHADI +LDL+KN G + RARDLFY LW+ DLFMERV+DD WSL CP GL D
Sbjct: 301 PWHADIAAWLDLKKNLGDDGIRARDLFYGLWISDLFMERVKDDQMWSLMCPKKCPGLMDV 360
Query: 363 WGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGT 422
+G +F LY++YE +G + AR+LW IL SQ+E G P+M++KDSCNRKSNQQ++G
Sbjct: 361 YGSDFVALYTKYESQGMYVKQVEARELWTHILRSQMENGMPFMMYKDSCNRKSNQQHVGV 420
Query: 423 IKSSNLCTEIVEFSSPEETAVCNLASIALPRYVR-EKGVPVQSNVSKLVGSRDSK----- 476
+K NLCTEIVE S P AVCNLA++ LP V E G+ S + +
Sbjct: 421 VKCGNLCTEIVEVSEPHRPAVCNLAAVCLPTCVACECGIRQASRTEVASSASSAVQACED 480
Query: 477 ---NRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFIL 533
+ FDF L +T+++ +NLN++ID + Y + N + RP+GIG+QGLAD F +
Sbjct: 481 PTCRKSFDFGELGRLTEVLVKNLNRVIDKSDYAFDGANHRNSQDRPLGIGVQGLADVFAM 540
Query: 534 LGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNIT 593
LGL F+ EA +LN IFET+YYHA+ AS +LA +D PY TY GSP+S+GI Q DMW +
Sbjct: 541 LGLAFDGTEAARLNVQIFETMYYHAMAASCKLAEEDQPYPTYKGSPVSQGIFQFDMWGVK 600
Query: 594 PSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEF 653
PS DW+SL+ + K GVRNSLL+APMPTAST+QI GNNE FEP+T+N++TR VLSG+F
Sbjct: 601 PSAMHDWTSLKRRVQKYGVRNSLLLAPMPTASTAQIFGNNEAFEPFTNNLFTRGVLSGDF 660
Query: 654 IVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDM 713
++N HL+++L LG+W + +++ +NGS+ ++P+ + ++KTVWEI QKT+++M
Sbjct: 661 QIINPHLVRELIRLGMWGEETRMRLMADNGSIRTWEDVPQHTRDVFKTVWEISQKTIINM 720
Query: 714 AADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDT 773
AADR +IDQSQSLNIHM P+ KL+S+H Y W KG+KTGMYYLR+R A +AI+FTVD
Sbjct: 721 AADRAPFIDQSQSLNIHMADPNVSKLSSMHMYGWQKGLKTGMYYLRSRPAVNAIQFTVDK 780
Query: 774 S 774
+
Sbjct: 781 T 781
>gi|50310227|ref|XP_455133.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644269|emb|CAG97840.1| KLLA0F01188p [Kluyveromyces lactis]
Length = 855
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/787 (51%), Positives = 555/787 (70%), Gaps = 42/787 (5%)
Query: 10 KEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTT-TQLDELAAETAAAMT 68
KE DK+ L+ L++ L+ E+ + + +K+ G+ T ++ AET A T
Sbjct: 15 KETFNKDKLKKFLQTLTFSLNAEYIELDTLVEKILVGIPNEPTERSKFVSYVAETVAGST 74
Query: 69 VNHPDYALLAGRVAVSNLHKITKN-SFSETI-------KDMYNYYNKRS----GKKASLV 116
HPDY++LA RV + LH+I + +F+E + +++ KR +L+
Sbjct: 75 SAHPDYSILAARVEIRELHRIIGDATFTENLAKLRKISREVTEDATKRRKITRDLSKNLI 134
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS-RVVERPQHMLMRVS 175
+D+ Y+ +K +D AI RD++F YFG+KTL +SYL+K ++ + E PQ M MRV+
Sbjct: 135 SDEFYQYALKFKDKIDQAIDKSRDYNFTYFGWKTLCKSYLMKRNNEQTHETPQFMFMRVA 194
Query: 176 VGIHK--DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYD 233
+ IH DD DS L+T+ LMSQ +F HA+PTL N+GT LSSCFL+ M+DDSI+GIY
Sbjct: 195 LAIHGPFDDIDSVLETFELMSQKYFIHASPTLCNSGTVNQYLSSCFLVGMEDDSIDGIYK 254
Query: 234 TLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKR 293
TL K A+ISK++GG+G+ + NIRA+G+YI G+NG+SNG+VPML+VFN+TARYVDQGG KR
Sbjct: 255 TLHKTALISKASGGVGIHVSNIRANGAYISGSNGTSNGLVPMLRVFNNTARYVDQGGNKR 314
Query: 294 KGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCP 353
GAF IYLEPWHADI +FL LRKN GKEE RARDLFYALW+PDLFM+RV ++ WS+F P
Sbjct: 315 PGAFCIYLEPWHADIIDFLQLRKNHGKEEMRARDLFYALWIPDLFMKRVENNEDWSIFSP 374
Query: 354 SDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNR 413
+A GL D +G EF+ LY +YE+E + + A+++W EIL SQ ETG P+ML+KD+CN+
Sbjct: 375 DEAPGLTDCYGDEFDKLYERYEKELIPRKKMKAQQIWSEILQSQTETGVPFMLYKDACNK 434
Query: 414 KSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVR--EKGVPVQSNVSKLVG 471
KSNQ+NLG IKSSNLC EIVE+SSPEE AVCNLAS+ALP YV G PV
Sbjct: 435 KSNQKNLGVIKSSNLCCEIVEYSSPEEVAVCNLASVALPTYVNLSSDGPPV--------- 485
Query: 472 SRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTF 531
FDF +L V K++ +NL++ IDV YP+ R N+R+RP+ IG+QGLADTF
Sbjct: 486 --------FDFVKLHHVVKVLVKNLDRTIDVGKYPVPEARNGNIRNRPLAIGVQGLADTF 537
Query: 532 ILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN 591
+L PFES +A LNK IFETIY+ A++AS ELA G YE++ GSP S+G LQ D+W+
Sbjct: 538 MLCRTPFESVDAATLNKQIFETIYHAAIEASTELAELFGHYESFPGSPASEGQLQFDLWS 597
Query: 592 ITPSDRW-----DWSSLREMISK-NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYT 645
+ D + DW SL+ I+K G+RNSLLV PMPTASTSQILG E FEP TSNIY+
Sbjct: 598 LN-KDNYKFLFDDWDSLKSRITKGKGLRNSLLVGPMPTASTSQILGFTESFEPMTSNIYS 656
Query: 646 RRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEI 705
RRVLSGEF ++N++++ D +LG+W+ LK +I+ +NGS+ I IPEE+K +YKTVWE
Sbjct: 657 RRVLSGEFTIINQYMVDDFCQLGIWNEKLKNRILRDNGSIQTIEGIPEEVKNLYKTVWET 716
Query: 706 KQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAAD 765
Q+ ++D+++DR +IDQSQSLN+++ +P GKLT++HFY W KG+KTGMYYLRT+AA+
Sbjct: 717 SQRKMIDLSSDRAPFIDQSQSLNLYLREPTMGKLTAMHFYTWKKGLKTGMYYLRTQAASR 776
Query: 766 AIKFTVD 772
AI+FT++
Sbjct: 777 AIQFTLN 783
>gi|194377918|dbj|BAG63322.1| unnamed protein product [Homo sapiens]
Length = 570
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/589 (65%), Positives = 472/589 (80%), Gaps = 20/589 (3%)
Query: 223 MKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDT 282
MKDDSIEGIYDTLK+CA+ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+T
Sbjct: 1 MKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNT 60
Query: 283 ARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERV 342
ARYVDQGG KR GAFAIYLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV
Sbjct: 61 ARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRV 120
Query: 343 RDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGT 402
+ WSL CP++ GL + WG EFE LY+ YE++GR + V+ A++LW+ I+ SQ ETGT
Sbjct: 121 ETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIGSQTETGT 180
Query: 403 PYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPV 462
PYML+KDSCNRKSNQQNLGTIK SNLCTEIVE++S +E AVCNLAS+AL YV
Sbjct: 181 PYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV------- 233
Query: 463 QSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGI 522
+ +DF++LAEVTK++ NLNKIID+N+YP+ SN RHRPIGI
Sbjct: 234 ------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGI 281
Query: 523 GIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSK 582
G+QGLAD FIL+ PFES EAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SK
Sbjct: 282 GVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSK 341
Query: 583 GILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
GILQ DMWN+TP+D WDW L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSN
Sbjct: 342 GILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSN 401
Query: 643 IYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTV 702
IYTRRVLSGEF +VN HLLKDLTE GLW +K +II NGS+ I EIP++LK +YKTV
Sbjct: 402 IYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTV 461
Query: 703 WEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRA 762
WEI QKT++ MAA+RG +IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR
Sbjct: 462 WEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRP 521
Query: 763 AADAIKFTVDTSVLNNEKANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
AA+ I+FT++ L +++ + + + N A +VCSL+N++EC+ CGS
Sbjct: 522 AANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 570
>gi|343959472|dbj|BAK63593.1| ribonucleoside-diphosphate reductase large subunit [Pan
troglodytes]
Length = 570
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/589 (65%), Positives = 472/589 (80%), Gaps = 20/589 (3%)
Query: 223 MKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDT 282
MKDDSIEGIYDTLK+CA+ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+T
Sbjct: 1 MKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNT 60
Query: 283 ARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERV 342
ARYVDQGG KR GAFAIYLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV
Sbjct: 61 ARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRV 120
Query: 343 RDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGT 402
+ WSL CP++ GL + WG EFE LY+ YE++GR + V+ A++LW+ I+ SQ ETGT
Sbjct: 121 ETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGT 180
Query: 403 PYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPV 462
PYML+KDSCNRKSNQQNLGTIK SNLCTEIVE++S +E AVCNLAS+AL YV
Sbjct: 181 PYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV------- 233
Query: 463 QSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGI 522
+ +DF++LAEVTK++ NLNKIID+N+YP+ SN RHRPIGI
Sbjct: 234 ------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGI 281
Query: 523 GIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSK 582
G+QGLAD FIL+ PFES EAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SK
Sbjct: 282 GVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSK 341
Query: 583 GILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
GILQ DMWN+TP+D WDW L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSN
Sbjct: 342 GILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSN 401
Query: 643 IYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTV 702
IYTRRVLSGEF +VN HLLKDLTE GLW +K +II NGS+ I EIP++LK +YKTV
Sbjct: 402 IYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTV 461
Query: 703 WEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRA 762
WEI QKT++ MAA+RG +IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR
Sbjct: 462 WEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRP 521
Query: 763 AADAIKFTVDTSVLNNEKANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
AA+ I+FT++ L +++ + + + N A +VCSL+N++EC+ CGS
Sbjct: 522 AANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 570
>gi|357541940|gb|AET84702.1| ribonucleotide reductase [Ostreococcus lucimarinus virus OlV4]
Length = 607
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/617 (61%), Positives = 482/617 (78%), Gaps = 19/617 (3%)
Query: 156 LLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQL 215
L ++D ++E PQ+M MRV++GIH +D DS L+TY MS+ F HATPTLFNAGTP+PQ+
Sbjct: 2 LQRLDGVLMETPQYMFMRVAIGIHGEDIDSVLETYDKMSRGMFIHATPTLFNAGTPRPQM 61
Query: 216 SSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPM 275
SSCFL+ K+DSI GIY TL +CA ISK AGGIG+ IH++RA+ S I GTNG S+GI+PM
Sbjct: 62 SSCFLIANKEDSINGIYGTLTECAQISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPM 121
Query: 276 LQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVP 335
L+VFN TARYV+Q G +RKG+ A+YLEPWHADI EFL+LR NQG EE R RDLF ALW+P
Sbjct: 122 LRVFNATARYVNQAG-RRKGSIAVYLEPWHADIMEFLELRLNQGDEEARCRDLFSALWIP 180
Query: 336 DLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILN 395
DLFM+RV + G WSLFCP A GL+D+ G EFE LY++YEEEGRA + A +W IL
Sbjct: 181 DLFMKRVEESGNWSLFCPDKAPGLSDAVGEEFEALYTKYEEEGRATATVPAADVWKAILK 240
Query: 396 SQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYV 455
SQ ETGTPYML+KD+CN+KSNQ+NLG IKSSNLCTEI+EF+ +ETAVCNLASIALP+YV
Sbjct: 241 SQTETGTPYMLYKDACNQKSNQKNLGVIKSSNLCTEILEFTDKDETAVCNLASIALPKYV 300
Query: 456 REKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNL 515
DS+ + FD+E+L EVTK +T+NLN++ID N YP+ET R+SN+
Sbjct: 301 ------------------DSETKTFDYEKLHEVTKTVTKNLNRVIDRNFYPVETARKSNM 342
Query: 516 RHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETY 575
RHRPIG+G+QGLAD FIL F+S EA+++N IFET+Y+ AL+AS+ELA DGPYET+
Sbjct: 343 RHRPIGLGVQGLADVFILCRHAFDSDEAKEINARIFETMYHAALEASSELAEVDGPYETF 402
Query: 576 FGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
GSP S+G+LQ DMW +DW +L+E I + G+RNSLL+APMPTAST+QILGNNEC
Sbjct: 403 EGSPASQGVLQFDMWEGETKLHYDWDALKERIKERGLRNSLLMAPMPTASTAQILGNNEC 462
Query: 636 FEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEEL 695
FEPYT+NIY RR L+GEF++VNKHL+ DL E+GLWS +K ++ GS+ I +IP+E+
Sbjct: 463 FEPYTTNIYLRRTLAGEFVIVNKHLVDDLKEIGLWSKDMKDLMVKAGGSIQNIVDIPDEI 522
Query: 696 KAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
K +Y+TVWEIK K ++DMAADRG +IDQSQS+N+ ME P KL+S+H Y+W KG+KTGM
Sbjct: 523 KKLYRTVWEIKMKDVIDMAADRGRFIDQSQSMNLFMESPTMSKLSSMHMYSWKKGLKTGM 582
Query: 756 YYLRTRAAADAIKFTVD 772
YYLR++A A I+F+++
Sbjct: 583 YYLRSKAKARPIQFSLE 599
>gi|307169039|gb|EFN61884.1| Ribonucleoside-diphosphate reductase large subunit [Camponotus
floridanus]
Length = 744
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/755 (51%), Positives = 526/755 (69%), Gaps = 22/755 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGRKEPV FD+ITAR+K L Y L + DP ++A +V +Y GVTT +LD LA
Sbjct: 1 MHVLKRDGRKEPVHFDEITARIKTLCYDLDMNYVDPSIIALRVITDLYSGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
+E AA+M HPDYA+LA R+A+SNLHK TK +FSE I D+Y+ N + K+ ++++
Sbjct: 61 SEIAASMINQHPDYAILAARIAISNLHKETKKTFSEVIADLYDAKNSITNKRLPIISEKY 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II NA L+ AIIYDRDF++ Y +K LE ++LLK++ +VVERPQHMLMRV++ IH
Sbjct: 121 YKIIQSNADKLNSAIIYDRDFNYSYTTYKMLETNHLLKLNGKVVERPQHMLMRVAIAIHD 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD D A++TY+ +S+ +F + TL A T Q++S FLL M DSI+GI DTL++ A+
Sbjct: 181 DDIDKAIETYNFLSKQYFIYPAQTLDTACTVTQQMASSFLLTMSGDSIDGILDTLERSAV 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
+ G IG ++H IRA + I GT G SNG+VPML+ +N + V + K +Y
Sbjct: 241 LCHYNGDIGFNVHCIRAKNTPIRGTGGVSNGLVPMLKAYNTSIATVSR---KNTEQVTVY 297
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDL+KN G+E+ RA+D+FYALW PDLFM+R+ +D WSL CP + L
Sbjct: 298 LEPWHADIFEFLDLKKNIGEEKLRAKDMFYALWTPDLFMQRIFNDDVWSLMCPHECPDLI 357
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+++G EFE LY++YE+EGR + I AR LW I+ +Q ETGTPY+++KD CNRK+N QNL
Sbjct: 358 EAYGEEFELLYTRYEKEGRFRKQIKARDLWLLIIQTQFETGTPYIVYKDHCNRKTNHQNL 417
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK S TEI+++SS +E A+CN ASIA+ +V D + F
Sbjct: 418 GTIKCSGFSTEIIQYSSSDEIAMCNTASIAVNMFV------------------DPIKKTF 459
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L E+ KI+T NL+K+ID N YP+ + S +HR IGIG+QGLAD FIL+ PFES
Sbjct: 460 DFNKLKEIVKIVTYNLDKMIDANFYPLPEIKLSCEKHRSIGIGVQGLADAFILMRYPFES 519
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA++LN IFET+YY AL+AS E+A+K G Y +Y GSP+SKG+LQ DMWN P+D WDW
Sbjct: 520 QEARKLNIQIFETLYYGALEASCEIAIKKGSYVSYKGSPISKGMLQYDMWNAKPTDLWDW 579
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
++L++ I ++GVRNSLL+A M A +Q+L NN EPYTSNIY LS +F +V L
Sbjct: 580 NTLKKKIEEHGVRNSLLIAQMSDAFMAQMLENNVSVEPYTSNIYVIHALSKQFRIVKPRL 639
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL E LW + KII +GS+ I +IP ELK +YKT WE+ QKT+ DMAA RG +
Sbjct: 640 LRDLIEKKLWDENICNKIINNDGSIQNIEDIPNELKLLYKTAWEMPQKTIFDMAACRGPF 699
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
IDQSQ LN+HM P KLTS+HFYAW G+K+ +
Sbjct: 700 IDQSQCLNVHMIDPLE-KLTSMHFYAWENGLKSSI 733
>gi|118197505|ref|YP_874319.1| ribonucleotide reductase large subunit [Ectropis obliqua NPV]
gi|37039662|gb|AAQ88175.1| ribonucleotide reductase large subunit [Ectropis obliqua NPV]
Length = 760
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/776 (51%), Positives = 544/776 (70%), Gaps = 32/776 (4%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V KRD K+ KI L+ LS L+K D + ++ + V+T+QL L A
Sbjct: 4 VTKRDNAKQCFDQKKIVKTLQNLSVDLNKNLIDCEALVAQLKKTLVSNVSTSQLCVLLAR 63
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
+A+M H +YA+LAGR+ V + HK + ++ + ++YN +LV+ Y+
Sbjct: 64 ESASMAYIHDEYAMLAGRLMVIDNHKQVSDDYAVVVDNLYN---------QNLVSAQFYK 114
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDD 182
+ N ++ + Y+ D+D+ YFGFKTLE YL ++ +V ER QHM MRV++ IH +D
Sbjct: 115 SAIANMHTINATLNYNLDYDYKYFGFKTLENGYLKTIEGKVAERIQHMYMRVALTIHGND 174
Query: 183 TD----SALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
TD + +TY+LM+ +THA+PTLF +G+ QL+SCFLL +K+DSI GIY+TL+ C
Sbjct: 175 TDDCIENVFETYNLMAHKMYTHASPTLFASGSCYAQLASCFLLNIKEDSIVGIYETLRDC 234
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A+ISK GGIGLS+HN+RA GS+I TNG++NG+ ML+V+N+ R+VDQGG KRKGA A
Sbjct: 235 ALISKFGGGIGLSVHNVRARGSFIESTNGTANGLEAMLRVYNNAVRHVDQGG-KRKGAMA 293
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
IY+EPWHADI++FL+L++N G E+ +ARDL YALWVPDLFM+RV DG WSL CP ++
Sbjct: 294 IYVEPWHADIYDFLELKRNMGAEDRKARDLLYALWVPDLFMKRVEADGMWSLMCPRESPL 353
Query: 359 LADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQ 418
L G EFE LY YE+ G+ I AR L+ I+ +Q+ETGTPYM++KD+CN KSNQ+
Sbjct: 354 LDTVHGSEFEQLYVAYEKCGKFVRQIKARDLFRTIVETQVETGTPYMMYKDACNMKSNQK 413
Query: 419 NLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNR 478
+LGTIK+SNLC EIVE+S E+AVCNLASI + ++V D
Sbjct: 414 HLGTIKNSNLCAEIVEYSDKNESAVCNLASICVNQFV------------------DIDVG 455
Query: 479 LFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
++FE L VTKI+ +NLNKIID+N+YP+ + ++SN +HRPIG+GIQGLADTF +L +P+
Sbjct: 456 EYNFEMLKYVTKIVVKNLNKIIDINYYPLLSAQKSNRKHRPIGVGIQGLADTFAMLRMPY 515
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW 598
ES +A+ LN I ETIY+ AL+AS ELA G +++YF SP S GILQ D+WN TP+ W
Sbjct: 516 ESDQAKVLNTKIAETIYFGALEASCELAKAYGVHDSYFSSPASLGILQYDLWNHTPTSMW 575
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
DW+ L++ I ++G+RNSL VA MPTA+T+QILGNNE FEP+T+NIY RRVL+G+F V+NK
Sbjct: 576 DWTQLKKDIKQHGLRNSLCVAYMPTATTAQILGNNESFEPFTNNIYVRRVLAGDFQVINK 635
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
+L DL +L L++ ++ KII NGSV I EIP+ ++ +YKTVWE+K K L+ MAADRG
Sbjct: 636 YLTDDLIKLNLYNEQMRNKIIANNGSVQNIEEIPKHVRELYKTVWEMKVKNLIGMAADRG 695
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
+IDQSQS NI + QP + LT++H + W G+KTGMYYLRT+ AADAIKFTVD S
Sbjct: 696 PFIDQSQSFNIFLSQPTYALLTTIHMHTWKSGLKTGMYYLRTKPAADAIKFTVDKS 751
>gi|374106763|gb|AEY95672.1| FACR155Wp [Ashbya gossypii FDAG1]
Length = 864
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/791 (51%), Positives = 540/791 (68%), Gaps = 36/791 (4%)
Query: 1 MYVIKRD-GRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDEL 59
+++I D G E K+ L+KL +GL D +++ AG+ + ++L
Sbjct: 7 IFIISDDSGLTEAFDERKLLESLRKLQFGLKINDADIDKAVKRIAAGIGGDIRDSELVAY 66
Query: 60 AAETAAAMTVNHPDYALLAGRVAVSNLHK-ITKNSFSETIKDMYNYYNKRSGKKASL--- 115
ET A+M HPD++LLA RV + LHK + F+ + + + G A
Sbjct: 67 IGETLASMITRHPDFSLLAARVEIKVLHKRLLGLGFTGNLAVLCESGDSPEGHAAKRKRA 126
Query: 116 --------VADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERP 167
V ++Y++ +++ +D AI DF F YFG+KTL +SYLLK RV E P
Sbjct: 127 MSPCTRGPVRRELYDLAVQHRNIIDQAIDDTLDFTFTYFGWKTLCKSYLLKHQGRVHETP 186
Query: 168 QHMLMRVSVGIH--KDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKD 225
Q+M MRV++ +H D D L+TY LM+ +F HA+PTLFNAGT LSSCFLL + +
Sbjct: 187 QYMFMRVALALHGPSGDIDRVLETYRLMANKYFIHASPTLFNAGTTSQFLSSCFLLGIHE 246
Query: 226 DSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARY 285
DSI+GIY+ L K A+ISK++GGIG+ + +IRA+GSYI GTNG+SNG+VPML VFN TARY
Sbjct: 247 DSIDGIYNALHKAALISKASGGIGIHVSDIRANGSYISGTNGTSNGLVPMLSVFNSTARY 306
Query: 286 VDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDD 345
VDQGG KR GAF IYLEPWHAD+F+FL LR+N GKEE RARDLFY LW+PDLFM+RV ++
Sbjct: 307 VDQGGNKRPGAFCIYLEPWHADVFDFLRLRRNHGKEEMRARDLFYGLWIPDLFMKRVENN 366
Query: 346 GKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYM 405
G+WSLF P++A GL+D +G FE LY +YE E + A++LW EIL SQ ETG P+M
Sbjct: 367 GEWSLFSPNEAVGLSDCYGEAFEQLYVRYERELEPYRRVKAQELWREILLSQTETGGPFM 426
Query: 406 LFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSN 465
L+KD+CN KSNQ+NLGTIKSSNLC EIVE+SS +E AVCNLAS+ALP +V
Sbjct: 427 LYKDACNSKSNQKNLGTIKSSNLCCEIVEYSSRDEVAVCNLASVALPTFV---------- 476
Query: 466 VSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQ 525
S S FD+ RL V K++T NL+K ID+ YP+ RSN +HRP+ +G+Q
Sbjct: 477 ------SVTSDAITFDYARLHSVVKVMTRNLDKAIDIGDYPVPEAERSNKKHRPLALGVQ 530
Query: 526 GLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGIL 585
GLAD F+L+ PF EA Q+N++IFETIY+ A++ S ELA + G Y ++ GSP SKG L
Sbjct: 531 GLADVFMLMRFPFNGEEAAQMNREIFETIYHAAVETSIELAAEYGAYASFVGSPASKGEL 590
Query: 586 QVDMWNITPSDRW----DWSSLREMI-SKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
Q D+W + DW L+E I S G+RNSLLV PMPTASTSQILG E FEP T
Sbjct: 591 QFDLWGRNKDNYQFLYDDWDELKEKIKSGPGLRNSLLVGPMPTASTSQILGFTESFEPMT 650
Query: 641 SNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYK 700
S IYTRRVLSGE+ +VNK++++D +LG+WS LK +II + GS+ I IP +LK +YK
Sbjct: 651 SMIYTRRVLSGEYTLVNKYMVQDFCDLGIWSEELKNRIIKDGGSIQGIDGIPPDLKDLYK 710
Query: 701 TVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRT 760
TVWE+ Q+ L+D++ADR ++DQSQSLN+ +++P GKLTS+HFYAW KG+KTGMYYLRT
Sbjct: 711 TVWELPQRKLIDLSADRAPFVDQSQSLNLFLKEPTMGKLTSMHFYAWKKGLKTGMYYLRT 770
Query: 761 RAAADAIKFTV 771
+AAA+AI+FT+
Sbjct: 771 QAAANAIQFTL 781
>gi|254567974|ref|XP_002491097.1| One of two large regulatory subunits of ribonucleotide-diphosphate
reductase [Komagataella pastoris GS115]
gi|238030894|emb|CAY68817.1| One of two large regulatory subunits of ribonucleotide-diphosphate
reductase [Komagataella pastoris GS115]
gi|328352376|emb|CCA38775.1| ribonucleoside-diphosphate reductase subunit M1 [Komagataella
pastoris CBS 7435]
Length = 774
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/806 (50%), Positives = 546/806 (67%), Gaps = 48/806 (5%)
Query: 10 KEPVRFDKITARLK----KLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAA 65
KE + FD+ ARLK KLS+GL+ + D LV +KV + + + L L +E A
Sbjct: 5 KEAISFDE--ARLKRSLLKLSFGLNLKFVDIALVVEKVSLAIIENLHLQDLLNLTSEILA 62
Query: 66 AMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIM 125
+++ H DY+ LA R+ ++L K +SF + N + V + I
Sbjct: 63 SLSTRHYDYSNLAARLLSNHLRKRLGDSF---------FANCERLAEHGFVDKGLLTIAR 113
Query: 126 KNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS 185
N+ LDG+I +RDFDFDYFG+ TL+ YLLK D ++E PQ + MRV++GIH +D S
Sbjct: 114 SNSEQLDGSIKPERDFDFDYFGYMTLQSIYLLKKDDLILETPQFLFMRVALGIHGEDLSS 173
Query: 186 ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSA 245
A++TY LMSQ +F HA+PTLF+AGTP P LSSCFL+ ++D + +Y +L K A+IS +A
Sbjct: 174 AIQTYDLMSQGYFIHASPTLFHAGTPTPYLSSCFLMGLQDADVNSVYQSLHKIAMISNAA 233
Query: 246 GGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWH 305
GGIG+++H+I A + + GIVP+++V N+TARYV QG KR AFAIYLEPWH
Sbjct: 234 GGIGINVHDIPAE-------DACNRGIVPLIKVLNETARYVQQGSNKRPSAFAIYLEPWH 286
Query: 306 ADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGI 365
++F+ L+LRKN GKEE RARDLFYALW+PDLFME+V + W LF P A GL D +G
Sbjct: 287 EEVFDLLNLRKNHGKEEIRARDLFYALWIPDLFMEKVEKNEDWCLFNPLHAKGLNDVYGE 346
Query: 366 EFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKS 425
+F LY++YE++G I A++LW I+++QIETGTP+ML+KDSCNRKSNQ NLGTI+
Sbjct: 347 QFNLLYAEYEKKGMYVRKIPAQQLWNAIVDAQIETGTPFMLYKDSCNRKSNQSNLGTIQC 406
Query: 426 SNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERL 485
SNLC EIVE+SS ++ AVCNLASI LP+YV D K FDFE L
Sbjct: 407 SNLCCEIVEYSSRDQIAVCNLASIGLPKYV-----------------VDGK---FDFESL 446
Query: 486 AEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQ 545
+I+TENLNK+ID++ YP+ SN RP+ IG+QGL DTF+LL +P++S EA
Sbjct: 447 KNSVRIVTENLNKVIDISKYPVPEASYSNDLTRPMAIGVQGLWDTFMLLKIPYDSEEAAA 506
Query: 546 LNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD-RWDWSSLR 604
LN IFETIYY AL+ S +A KDGPY+++ GSP SKG+LQ+D+WN+ D DW SLR
Sbjct: 507 LNSQIFETIYYSALETSMNIAKKDGPYKSFQGSPASKGLLQMDLWNVKEEDLTLDWKSLR 566
Query: 605 EMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDL 664
I K+G+RNSLLV PMPTASTSQILG E FEP + N YTRRV SGE+ VVNK+L+ DL
Sbjct: 567 SDIVKHGLRNSLLVGPMPTASTSQILGFCESFEPLSYNFYTRRVSSGEYQVVNKYLIDDL 626
Query: 665 TELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQS 724
LGLW+ +L+ +II +GS+ +I EIP+E+K++YKTVWEI Q+ ++MAADRG +IDQS
Sbjct: 627 INLGLWTDSLRQEIIGNDGSIQEIDEIPQEVKSLYKTVWEISQRITINMAADRGRFIDQS 686
Query: 725 QSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN-----NE 779
QS+N+++ +P+ GKLT++HFYAW KG+KTGMYYLRT+AA+ AIKF++D S N
Sbjct: 687 QSMNLYLAKPNRGKLTAMHFYAWKKGLKTGMYYLRTKAASSAIKFSIDISKRKRDGTYNT 746
Query: 780 KANRADNDVEANLAQVVCSLKNQEEC 805
R EA C L N E C
Sbjct: 747 PTKRQAVQSEALETTPSCQLNNCESC 772
>gi|45185841|ref|NP_983557.1| ACR155Wp [Ashbya gossypii ATCC 10895]
gi|44981631|gb|AAS51381.1| ACR155Wp [Ashbya gossypii ATCC 10895]
Length = 864
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/791 (51%), Positives = 540/791 (68%), Gaps = 36/791 (4%)
Query: 1 MYVIKRD-GRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDEL 59
+++I D G E K+ L+KL +GL D +++ AG+ + ++L
Sbjct: 7 IFIISDDSGLTEAFDERKLLESLRKLQFGLKINDADIDKAVKRIAAGIGGDIRDSELVAY 66
Query: 60 AAETAAAMTVNHPDYALLAGRVAVSNLHK------ITKN--SFSETIKDMYNYYNKRSGK 111
ET A+M HPD++LLA RV + LHK T N E+ + KR
Sbjct: 67 IGETLASMITRHPDFSLLAARVEIKVLHKRLLGLGFTGNLAVLCESGDSPEGHATKRKRA 126
Query: 112 KASL----VADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERP 167
+ V ++Y++ +++ +D AI DF F YFG+KTL +SYLLK RV E P
Sbjct: 127 MSPCTRGPVRRELYDLAVQHRNIIDQAIDDTLDFTFTYFGWKTLCKSYLLKHQGRVHETP 186
Query: 168 QHMLMRVSVGIH--KDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKD 225
Q+M MRV++ +H D D L+TY LM+ +F HA+PTLFNAGT LSSCFLL + +
Sbjct: 187 QYMFMRVALALHGPSGDIDRVLETYRLMANKYFIHASPTLFNAGTTSQFLSSCFLLGIHE 246
Query: 226 DSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARY 285
DSI+GIY+ L K A+ISK++GGIG+ + +IRA+GSYI GTNG+SNG+VPML VFN TARY
Sbjct: 247 DSIDGIYNALHKAALISKASGGIGIHVSDIRANGSYISGTNGTSNGLVPMLSVFNSTARY 306
Query: 286 VDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDD 345
VDQGG KR GAF IYLEPWHAD+F+FL LR+N GKEE RARDLFY LW+PDLFM+RV ++
Sbjct: 307 VDQGGNKRPGAFCIYLEPWHADVFDFLRLRRNHGKEEMRARDLFYGLWIPDLFMKRVENN 366
Query: 346 GKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYM 405
G+WSLF P++A GL+D +G FE LY +YE E + A++LW EIL SQ ETG P+M
Sbjct: 367 GEWSLFSPNEAVGLSDCYGEAFEQLYVRYERELEPYRRVKAQELWREILLSQTETGGPFM 426
Query: 406 LFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSN 465
L+KD+CN KSNQ+NLGTIKSSNLC EIVE+SS +E AVCNLAS+ALP +V
Sbjct: 427 LYKDACNSKSNQKNLGTIKSSNLCCEIVEYSSRDEVAVCNLASVALPTFV---------- 476
Query: 466 VSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQ 525
S S FD+ RL V K++T NL+K ID+ YP+ RSN +HRP+ +G+Q
Sbjct: 477 ------SVTSDAITFDYARLHSVVKVMTRNLDKAIDIGDYPVPEAERSNKKHRPLALGVQ 530
Query: 526 GLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGIL 585
GLAD F+L+ PF EA Q+N++IFETIY+ A++ S ELA + G Y ++ GSP SKG L
Sbjct: 531 GLADVFMLMRFPFNGEEAAQMNREIFETIYHAAVETSIELAAEYGVYASFVGSPASKGEL 590
Query: 586 QVDMWNITPSDRW----DWSSLREMI-SKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
Q D+W + DW L+E I S G+RNSLLV PMPTASTSQILG E FEP T
Sbjct: 591 QFDLWGRNKDNYQFLYDDWDELKEKIKSGPGLRNSLLVGPMPTASTSQILGFTESFEPMT 650
Query: 641 SNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYK 700
S IYTRRVLSGE+ +VNK++++D +LG+WS LK +II + GS+ I IP +LK +YK
Sbjct: 651 SMIYTRRVLSGEYTLVNKYMVQDFCDLGIWSEELKNRIIKDGGSIQGIDGIPPDLKDLYK 710
Query: 701 TVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRT 760
TVWE+ Q+ L+D++ADR ++DQSQSLN+ +++P GKLTS+HFYAW KG+KTGMYYLRT
Sbjct: 711 TVWELPQRKLIDLSADRAPFVDQSQSLNLFLKEPTMGKLTSMHFYAWKKGLKTGMYYLRT 770
Query: 761 RAAADAIKFTV 771
+AAA+AI+FT+
Sbjct: 771 QAAANAIQFTL 781
>gi|215401394|ref|YP_002332698.1| ribonucleotide reductase large subunit [Helicoverpa armigera
multiple nucleopolyhedrovirus]
gi|198448894|gb|ACH88684.1| ribonucleotide reductase large subunit [Helicoverpa armigera
multiple nucleopolyhedrovirus]
Length = 761
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/774 (49%), Positives = 539/774 (69%), Gaps = 33/774 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR E V K+ R+ +L + L+ + P V+ KV G+ TT +D A
Sbjct: 1 MYVVKRDGRLEQVSSSKLYQRIHRLCHDLNSQFVHPRAVSLKVIKGLSDNTTTEDIDIYA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A AAA+T H DY LAGR+ V+N+HK SF++ ++ ++ K +LV+D++
Sbjct: 61 ASVAAALTYKHYDYDTLAGRLLVTNMHKYVDESFTKVVQRLH---------KHNLVSDEL 111
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ +K++ ++ I D D++YFG++TL+ YL+K++ +V ER QHM MR+++GI
Sbjct: 112 LSVTIKHSKIIEENIDMKLDLDYNYFGYQTLKNGYLIKINEKVAERIQHMHMRIALGIFG 171
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DSA+K+Y +S+ +THA+PT+F AGT PQ+SSCFLL M+ DSI GIY+TL CAI
Sbjct: 172 DDIDSAIKSYKFLSRKMYTHASPTMFAAGTLTPQMSSCFLLTMESDSIRGIYNTLNDCAI 231
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK GGIGL+++++R S I TNG+++G++PML+VFN+ R+VDQGG KRKGA A+Y
Sbjct: 232 ISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPMLRVFNNMVRHVDQGG-KRKGAQAVY 290
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH DI + L +R+N G E+ +ARDL ALWVPD+FM+RV ++G WSL CP++ L
Sbjct: 291 VEPWHCDIMDVLHMRRNIGSEDTKARDLMNALWVPDIFMKRVEENGIWSLMCPNECPKLN 350
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G +FE+ Y YE++G+ + + A L I+ Q ETGTPYML+KD+CNRKSNQ N
Sbjct: 351 DTYGDDFEYWYKHYEDKGQFREQMPAVTLMRNIIEIQAETGTPYMLYKDACNRKSNQSNC 410
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IK SNLC EIV++ +P+ETAVCNLASIA+ +Y+ N F
Sbjct: 411 GLIKCSNLCAEIVQYCAPDETAVCNLASIAVNKYI--------------------NNDTF 450
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF+ L V K + +LNKIID N YPIET ++SN+RHRPIGIGIQGLAD F++L +P+ S
Sbjct: 451 DFQLLHTVVKHVVNSLNKIIDRNFYPIETAKKSNMRHRPIGIGIQGLADAFVMLRIPYVS 510
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A LNK I ET+Y+ AL+AS ELA PY T+ GS S+GILQ D+WN P+ WDW
Sbjct: 511 DAAVLLNKQIAETVYHAALEASYELASVSEPYSTFAGSKASEGILQYDLWNTVPTSLWDW 570
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S L+ I K G+RNSLLVA MPTA+T+QIL NNE FEP+ SN++ RRVLSGEF VVN++L
Sbjct: 571 SQLKMNIQKYGLRNSLLVAYMPTATTAQILNNNESFEPFHSNLFLRRVLSGEFQVVNRYL 630
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQ---KTLVDMAADR 717
+ DL +L L++++++ I+ GS++ I++IP+ LK +Y T+WEI + K +++MAADR
Sbjct: 631 VDDLIKLNLYTNSMRKTIMANRGSIASIAKIPDNLKKLYMTIWEIWENNGKYMIEMAADR 690
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
G +IDQSQS N++M P K+ S+H Y W +G+KTGMYY RT AA++ +FTV
Sbjct: 691 GAFIDQSQSFNVYMANPTLPKMASVHMYGWKRGLKTGMYYFRTLPAANSQQFTV 744
>gi|22549569|ref|NP_689342.1| rr1 gene product [Mamestra configurata NPV-B]
gi|22476748|gb|AAM95154.1| putative ribonucletide reductase large subunit-like protein
[Mamestra configurata NPV-B]
Length = 761
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/774 (49%), Positives = 540/774 (69%), Gaps = 33/774 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR E V K+ R+ +L + L+ + P V+ KV G+ TT +D A
Sbjct: 1 MYVVKRDGRLEQVSSSKLYQRIHRLCHDLNSQFVHPRAVSLKVIKGLSDNTTTEDIDIYA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A AAA+T H DY LAGR+ V+N+HK SF++ ++ ++ K +LV+D++
Sbjct: 61 ASVAAALTYKHYDYDTLAGRLLVTNMHKYVDESFTKVVQRLH---------KHNLVSDEL 111
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ +K++ ++ I D D++YFG++TL+ YL+K++ +V ER QHM MR+++GI
Sbjct: 112 LSVTIKHSKIIEENIDMKLDLDYNYFGYQTLKNGYLIKINEKVAERIQHMHMRIALGIFG 171
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DSA+K+Y +S+ +THA+PT+F AG+ PQ+SSCFLL M+ DSI GIY+TL CA+
Sbjct: 172 DDIDSAIKSYKFLSRKMYTHASPTMFAAGSLTPQMSSCFLLTMESDSIRGIYNTLNDCAM 231
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK GGIGL+++++R S I TNG+++G++PML+VFN+ R+VDQGG KRKGA A+Y
Sbjct: 232 ISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPMLRVFNNMVRHVDQGG-KRKGAQAVY 290
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH DI + L +R+N G E+ +ARDL ALWVPD+FM+RV ++G WSL CP++ L
Sbjct: 291 VEPWHCDIMDVLHMRRNIGSEDTKARDLMNALWVPDIFMKRVEENGIWSLMCPNECPKLN 350
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G +FE+ Y YE++G+ + + A L I+ Q ETGTPYML+KD+CNRKSNQ N
Sbjct: 351 DTYGDDFEYWYKHYEDKGQFREQMPAVTLMRNIIEIQAETGTPYMLYKDACNRKSNQSNC 410
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IK SNLC EIV++ +P+ETAVCNLASIA+ +Y+ N F
Sbjct: 411 GLIKCSNLCAEIVQYCAPDETAVCNLASIAVNKYI--------------------NNDTF 450
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF+ L V K + ++LNKIID N YPIET ++SN+RHRPIGIGIQGLAD F++L +P+ S
Sbjct: 451 DFQLLHTVVKHVVDSLNKIIDRNFYPIETAKKSNMRHRPIGIGIQGLADAFVMLRIPYVS 510
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A LNK I ET+Y+ AL+AS ELA PY T+ GS S+GILQ D+WN P+ WDW
Sbjct: 511 DAAVLLNKQIAETVYHAALEASYELASVSEPYSTFAGSKASEGILQYDLWNTVPTSLWDW 570
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S L+ I K G+RNSLLVA MPTA+T+QIL NNE FEP+ SN++ RRVLSGEF VVN++L
Sbjct: 571 SQLKINIQKYGLRNSLLVAYMPTATTAQILNNNESFEPFHSNLFLRRVLSGEFQVVNRYL 630
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQ---KTLVDMAADR 717
+ DL +L L++++++ I+ GS++ I++IP+ LK +Y T+WEI + K +++MAADR
Sbjct: 631 VDDLIKLNLYTNSMRKTIMANRGSIASIAKIPDNLKKLYMTIWEIWENNGKYMIEMAADR 690
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
G +IDQSQS N++M P K+ S+H Y W +G+KTGMYY RT AA++ +FTV
Sbjct: 691 GAFIDQSQSFNVYMANPTLPKMASVHMYGWKRGLKTGMYYFRTLPAANSQQFTV 744
>gi|384498832|gb|EIE89323.1| ribonucleoside-diphosphate reductase, alpha subunit [Rhizopus
delemar RA 99-880]
Length = 745
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/769 (51%), Positives = 531/769 (69%), Gaps = 33/769 (4%)
Query: 47 VYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYN-YY 105
+Y G+TT QLDELAAE A V HPD+ +LA R+++SNL K T +FS +K +YN
Sbjct: 1 MYPGITTVQLDELAAEIAVDAAVVHPDFVILAARLSISNLQKETHENFSNVVKALYNDNT 60
Query: 106 NKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVE 165
+ ++G +V + +++ ++A ++ I Y RDF FDYFGFK LE++ LLK+ ++ VE
Sbjct: 61 HPKTGAANPIVTKEFVKLVDEHAEKINSVIDYKRDFYFDYFGFKNLEKNLLLKIGNKTVE 120
Query: 166 RPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKD 225
RPQHM MRV++ IH D +SA KTY +S+H +THAT TL NAGT QLSS F + MKD
Sbjct: 121 RPQHMFMRVALTIHGQDLESAFKTYDYLSRHLYTHATTTLINAGTVCGQLSSFFEVQMKD 180
Query: 226 DSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARY 285
DSIEGIYDT+ CA I+K G +G+S IRASGSYI GTNG+SNGI+PML+VFND AR+
Sbjct: 181 DSIEGIYDTVTNCARIAKVFGSVGMSFQKIRASGSYIAGTNGTSNGIIPMLRVFNDAARF 240
Query: 286 VDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDD 345
+ G K KG FA+Y+EPWHADIFEF++L + G+E RAR L LW+PDLFM+RV ++
Sbjct: 241 ITPGSRKVKGTFAVYVEPWHADIFEFIELSRQNGEENLRARHLLLGLWIPDLFMKRVEEN 300
Query: 346 GKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYM 405
G WSL CP++ GL S+G FE LY +YE+ G+A+ +SA+KLWF IL++QIE+G P+M
Sbjct: 301 GDWSLMCPNECPGLDVSYGEAFEELYIRYEKAGKARKTVSAQKLWFSILDTQIESGMPFM 360
Query: 406 LFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSN 465
+KD+ NRKSNQ+NLG I S ++++ EE CN+ASIAL + V
Sbjct: 361 CYKDAANRKSNQKNLGVITGSTFYANTMQYADAEEIGSCNVASIALSKCV---------- 410
Query: 466 VSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQ 525
D+ R F+FE LA++ KI+ +NL+K+IDVN+Y E T+ S L+HR + +G+Q
Sbjct: 411 --------DTNTRSFNFEVLADIVKIVVKNLDKMIDVNNYVSEETKNSALKHRGLSLGVQ 462
Query: 526 GLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGIL 585
GLAD F+++ PF+S EA+QLNKDIFE IY+ AL+AS ELA GPY +Y GSP+S+GIL
Sbjct: 463 GLADVFLMMRYPFDSDEARQLNKDIFEHIYFAALEASNELAQASGPYPSYEGSPISQGIL 522
Query: 586 QVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYT 645
Q D+WN+ SD W LR I +GVRNSLLVAPMPT +TS LGN++ EPY S +YT
Sbjct: 523 QHDLWNVKGSDCLKWDDLRAKIKAHGVRNSLLVAPMPTTATSVCLGNSDGIEPYKSMLYT 582
Query: 646 RRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEI 705
R S + V+N HL+ DL E G+WS +K ++ +NGS+ I+ IP++LK +YKT WEI
Sbjct: 583 RPAHSRDRHVINPHLVGDLIERGIWSPKIKDMLLKDNGSIQNIAIIPDDLKKLYKTAWEI 642
Query: 706 KQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAAD 765
Q+ ++D+AADR +IDQSQSLN+ +P++G+L+S+HFYAW KG+KTGM YLRT
Sbjct: 643 PQRVIIDLAADRAPFIDQSQSLNLFSAEPNYGRLSSMHFYAWKKGLKTGMQYLRTNPH-- 700
Query: 766 AIKFTVDTSVLN-NEK--ANRADNDVEA---NLAQVVCSLKNQEECMAC 808
+ V+N NEK A D +VE NLA + CSL N E C++C
Sbjct: 701 ------ELVVINENEKETAENVDQEVEKTANNLAAMSCSLDNPESCVSC 743
>gi|429963199|gb|ELA42743.1| ribonucleoside-diphosphate reductase, alpha subunit [Vittaforma
corneae ATCC 50505]
Length = 771
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/758 (50%), Positives = 525/758 (69%), Gaps = 32/758 (4%)
Query: 32 EHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITK 91
EH D K+ G + T +L + +E AAA+ H DYA LA + + IT
Sbjct: 24 EHIDVADFLDKISLGTTPEMGTEELAKFCSEAAAALFTTHSDYAKLAAAILTTFHQSITL 83
Query: 92 NSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTL 151
SFSE IK + + SL+ ++YE+I++NA D I Y RDF+ YF +L
Sbjct: 84 ESFSEKIKLI--------KQNTSLLNLEIYELIIQNAPVYDSMIDYSRDFNLSYFSVHSL 135
Query: 152 ERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTP 211
RSY++K++ R +ERPQ + MR ++ IH++D +TY L+S +FTHATPTLFN+
Sbjct: 136 LRSYMIKINRRPIERPQDVFMRAAIQIHRNDFYRVKQTYDLISMGYFTHATPTLFNSCLK 195
Query: 212 QPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNG 271
QL+SCFL+ K+DS+EGIY+T+K CAIISK +GG+GLS+HNIR GS + T G S G
Sbjct: 196 TCQLASCFLISPKEDSLEGIYNTIKDCAIISKYSGGLGLSLHNIRCKGSPLKSTGGYSKG 255
Query: 272 IVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYA 331
+VP++++ N+T +YV+ GG KR+ A YLEPWH D+F++LD+RKN G EE RARD+F A
Sbjct: 256 VVPVIKIINETMKYVNLGGIKRQSTIAFYLEPWHMDVFDYLDVRKNSGNEEMRARDIFIA 315
Query: 332 LWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWF 391
+W+ DLFMERV +D +WSLF P++A GL D WG EF+ LY +YE+ +++VI A+KL+
Sbjct: 316 MWINDLFMERVENDEEWSLFDPNEAKGLYDVWGDEFKKLYLKYEKT-LSRVVIPAQKLFK 374
Query: 392 EILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIAL 451
I+NSQIETGTPYM++KD+CNR SNQQNLGTI+SSNLC EI+E+S+ +E AVCNLAS+ L
Sbjct: 375 AIINSQIETGTPYMVYKDTCNRYSNQQNLGTIRSSNLCAEIIEYSASDEIAVCNLASVCL 434
Query: 452 PRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTR 511
P +V KN +FDF L EV K NLN++ID N YP+ T
Sbjct: 435 PAFV--------------------KNGVFDFNALREVVKAALVNLNRVIDNNFYPVPETS 474
Query: 512 RSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGP 571
RSNL+HRP+GIGIQGLADTF L PFES +A++LNK I ET+Y+ A+++SAELA+++GP
Sbjct: 475 RSNLKHRPVGIGIQGLADTFSKLRYPFESQQARELNKLIAETMYFAAIESSAELAMQEGP 534
Query: 572 YETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILG 631
Y ++ GSP+SKGI +M+ PS W+W LR + + GVRNSL +A MPTA TSQ+ G
Sbjct: 535 YSSFVGSPLSKGIFHFEMYGAQPSGMWNWEELRAKVLQYGVRNSLFIALMPTAGTSQLFG 594
Query: 632 NNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEI 691
N+ECFEPYTSNI+TRR ++GEF VVN +L++DL LG+W+ +K II GS+ I I
Sbjct: 595 NSECFEPYTSNIFTRRTVAGEFQVVNTYLMEDLERLGMWNEEMKNIIIEHEGSIQSIPCI 654
Query: 692 PEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGM 751
P+E+K +YKTVWEIK K+++D+AADR ++DQS S+NI + QP +L+S+HFY W + +
Sbjct: 655 PQEIKNLYKTVWEIKMKSVIDLAADRQPFVDQSMSMNIFLAQPTFAQLSSMHFYGWRRKI 714
Query: 752 KTGMYYLRTRAAADAIKFTVDTSVLN---NEKANRADN 786
KTGMYYLRT+ + IKFTV+ ++ + NR DN
Sbjct: 715 KTGMYYLRTKPILNPIKFTVNQELVEKTLSSFGNRFDN 752
>gi|390165363|gb|AFL65010.1| rr1 [Mamestra brassicae MNPV]
Length = 761
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/774 (49%), Positives = 537/774 (69%), Gaps = 33/774 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR E V K+ R+ +L + L+ + P V+ KV G+ TT +D A
Sbjct: 1 MYVVKRDGRLEQVSSSKLYQRIHRLCHDLNSQFVHPRAVSLKVIKGLSDNTTTEDIDIYA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A AA +T H DY LAGR+ V+N+HK SF++ ++ ++ K +LV+D++
Sbjct: 61 ASVAATLTYKHYDYDTLAGRLLVTNMHKYVDESFTKVVQRLH---------KHNLVSDEL 111
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ +K++ ++ I D D++YFG++TL+ YL+K++ +V E QHM MR+++GI
Sbjct: 112 LSVTIKHSKIIEENIDMKLDLDYNYFGYQTLKNGYLIKINEKVAETIQHMHMRIALGIFG 171
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD DSA+K+Y +S+ +THA+PT+F AGT PQ+SSCFLL M+ DSI GIY+TL CA+
Sbjct: 172 DDIDSAIKSYKFLSRKMYTHASPTMFAAGTLTPQMSSCFLLTMESDSIRGIYNTLNDCAM 231
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK GGIGL+++++R S I TNG+++G++PML+VFN+ R+VDQGG KRKGA A+Y
Sbjct: 232 ISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPMLRVFNNMVRHVDQGG-KRKGAQAVY 290
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH DI + L +R+N G E+ +ARDL ALWVPD+FM+RV ++G WSL CP++ L
Sbjct: 291 VEPWHCDIMDVLHMRRNIGSEDTKARDLMNALWVPDIFMKRVEENGIWSLMCPNECPKLN 350
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D++G +FE+ Y YE++G+ + + A L I+ Q ETGTPYML+KD+CNRKSNQ N
Sbjct: 351 DTYGDDFEYWYKHYEDKGQFREQMPAVTLMRNIIEIQAETGTPYMLYKDACNRKSNQSNC 410
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IK SNLC EIV++ +P+ETAVCNLASIA+ +Y+ N F
Sbjct: 411 GLIKCSNLCAEIVQYCAPDETAVCNLASIAVNKYI--------------------NNDTF 450
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF+ L V K + +LNKIID N YPIET ++SN+RHRPIGIGIQGLAD F++L +P+ S
Sbjct: 451 DFQLLHTVVKHVVNSLNKIIDRNFYPIETAKKSNMRHRPIGIGIQGLADAFVMLRIPYVS 510
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A LNK I ET+Y+ AL+AS ELA PY T+ GS S+GILQ D+WN P+ WDW
Sbjct: 511 DAAVLLNKQIAETVYHAALEASYELASVSEPYSTFAGSKASEGILQYDLWNTVPTSLWDW 570
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S L+ I K G+RNSLLVA MPTA+T+QIL NNE FEP+ SN++ RRVLSGEF VVN++L
Sbjct: 571 SQLKINIQKYGLRNSLLVAYMPTATTAQILNNNESFEPFHSNLFLRRVLSGEFQVVNRYL 630
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQ---KTLVDMAADR 717
+ DL +L L++++++ I+ GS++ I++IP+ LK +Y T+WEI + K +++MAADR
Sbjct: 631 VDDLIKLNLYTNSMRKTIMANRGSIASIAKIPDNLKKLYMTIWEIWENNGKYMIEMAADR 690
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
G +IDQSQS N++M P K+ S+H Y W +G+KTGMYY RT AA++ +FTV
Sbjct: 691 GAFIDQSQSFNVYMANPTLPKMASVHMYGWKRGLKTGMYYFRTLPAANSQQFTV 744
>gi|20070048|ref|NP_613252.1| ribonucleotide reductase large subunit RR1 [Mamestra configurata
NPV-A]
gi|20043442|gb|AAM09277.1| ribonucleotide reductase large subunit RR1 [Mamestra configurata
NPV-A]
gi|33331880|gb|AAQ11188.1| putative ribonucletide reductase large subunit-like protein
[Mamestra configurata NPV-A]
Length = 761
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/774 (48%), Positives = 534/774 (68%), Gaps = 33/774 (4%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR E V K+ R+ +L + L+ + P V+ KV + TT +D A
Sbjct: 1 MYVVKRDGRLEQVSPSKLHNRIHRLCHDLNSQFVHPRAVSLKVIKSLSDHTTTEDIDIYA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A AA +T H DY +LAGR+ V+N+HK SF++ ++ ++ K +LV+D++
Sbjct: 61 ASVAATLTYKHYDYDMLAGRLLVTNMHKYVDESFTKVVQRLH---------KHNLVSDEL 111
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ +K++ ++ I D D++YFG++TL+ YL+K++ +V ER QHM MR+++GI
Sbjct: 112 LLVTIKHSKIIEENIDMKLDLDYNYFGYQTLKNGYLIKINEKVAERIQHMHMRIALGIFG 171
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD D+A+K+Y +S +THA+PT+F AGTP PQ+SSCFLL M+ DSI GIY+TL CA+
Sbjct: 172 DDIDNAIKSYKFLSTKMYTHASPTMFAAGTPTPQMSSCFLLTMESDSIRGIYNTLNDCAM 231
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK GGIGL+++++R S I TNG+++G++PML+VFN+ R+V+QGG KRKGA A+Y
Sbjct: 232 ISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPMLRVFNNMVRHVNQGG-KRKGAQAVY 290
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH DI + L +R+N G E+ +ARDL ALWVPD+FM RV+++G+WSL CP++ L
Sbjct: 291 VEPWHCDIMDVLHMRRNIGSEDTKARDLMNALWVPDIFMRRVQENGRWSLMCPNECPELN 350
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+++G EFE+ Y YE++G+ + + A L I+ Q ETGTPYML+KD+CNRKSNQ N
Sbjct: 351 NTFGDEFEYWYKHYEDKGQFRDQMPAVTLMRTIIEIQAETGTPYMLYKDACNRKSNQSNC 410
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
G IK SNLC EIV++ +P+ETAVCNLASIA+ +Y+ N F
Sbjct: 411 GLIKCSNLCAEIVQYCAPDETAVCNLASIAVNKYI--------------------INGTF 450
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF+ L V K + +LNKIID N YP+E ++SN+RHRPIGIGIQGLAD F++L +P+ S
Sbjct: 451 DFQLLHSVVKHVVISLNKIIDRNFYPVEAAKKSNMRHRPIGIGIQGLADAFVMLRIPYVS 510
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
A LNK I ET+Y+ AL AS +LA PY T+ GS S+GILQ D+WN P+ WDW
Sbjct: 511 DAAVLLNKQISETVYHAALDASLKLASDSEPYSTFAGSKASQGILQYDLWNAIPTSLWDW 570
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
S L+ I K+G+RNSLLVA MPTA+T+QIL NNE FEP+ SN++ RRVLSGEF VVN++L
Sbjct: 571 SQLKMNIQKHGLRNSLLVAYMPTATTAQILNNNESFEPFHSNLFLRRVLSGEFQVVNRYL 630
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEI---KQKTLVDMAADR 717
+ DL L L++ +++ +I+ GS++ I EIP+ +K +Y T+WE K ++DMAADR
Sbjct: 631 VDDLIALNLYTSSMRKRIMANRGSIASIDEIPDNIKKLYMTIWECWHNNGKFMIDMAADR 690
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
G +IDQSQS N++M P K+ S+H Y W +G+KTGMYY RT AA++ +FTV
Sbjct: 691 GAFIDQSQSFNVYMADPTLAKMASVHMYGWQRGLKTGMYYFRTLPAANSQQFTV 744
>gi|68304287|ref|YP_249755.1| RR1 [Chrysodeixis chalcites nucleopolyhedrovirus]
gi|67973116|gb|AAY84082.1| RR1 [Chrysodeixis chalcites nucleopolyhedrovirus]
Length = 780
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/790 (50%), Positives = 541/790 (68%), Gaps = 37/790 (4%)
Query: 3 VIKRDGRKE-PVRFDKITARLKKLSYGL--SKEHCDPVLVAQKVCAGVYKGVTTTQLDEL 59
+I R+GR+ V D I L S L +KE+ D +A K+ G+Y + + +E
Sbjct: 7 MILRNGRESIKVNMDYIKTYLYTRSGDLKKNKEYIDFNYIADKIFCGIYDNIHEDEFEEY 66
Query: 60 AAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADD 119
+A A+ T H Y+ LA +AV+ LH T++ +S+ ++ ++ K ++ D
Sbjct: 67 SANVCASQTYKHYVYSDLAVVIAVNKLHAKTEDDYSKVVEILW---------KNGILCDS 117
Query: 120 VYEIIMKNAACLDGAIIYDRDFDFDYFGFKTL-ERSYLLKMDSRVVERPQHMLMRVSVGI 178
Y I++K+ ++ +I YD D + YFG TL E YL+++D+ VVERPQHMLMRV++ I
Sbjct: 118 FYSIVIKHLDSINASISYDFDKHYTYFGLMTLIEGKYLMRVDNIVVERPQHMLMRVALQI 177
Query: 179 HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
H DD +SA+++Y LM FTHA+PTLF++G PQ+SSC+LL +++DSI GIY TL C
Sbjct: 178 HGDDIESAIESYRLMRAKLFTHASPTLFSSGMKMPQMSSCYLLNIQEDSINGIYKTLNDC 237
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A+ISK GGIGL++ IRA+ S I TNG++ G+ P L+VFN R+VDQGG KRKGA
Sbjct: 238 AMISKHGGGIGLNVTQIRATNSKIESTNGTAAGLGPALRVFNSMLRHVDQGG-KRKGAMT 296
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
+Y+EPWHAD+F FLDL++N G E+ +ARDL +A+W PDLFM+RV+ GKWSL CP + G
Sbjct: 297 VYIEPWHADVFTFLDLKRNMGAEDMKARDLLFAMWTPDLFMKRVKTGGKWSLMCPDECPG 356
Query: 359 LADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQ 418
L D +G EFE LY YE EG+ K ISA L +I+ +Q+ETG PYM+FKD N K+NQ+
Sbjct: 357 LNDCYGQEFEDLYENYEAEGKFKKQISALDLHRKIIETQVETGAPYMMFKDHVNNKNNQK 416
Query: 419 NLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNR 478
N G I++SNLC EIV++S ETAVCNLASIA+ + ++ +
Sbjct: 417 NEGVIRNSNLCAEIVQYSDNRETAVCNLASIAVNNFANKQF------------------K 458
Query: 479 LFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
FDF+ L V++++T NLNKIID+N YP+ + + SN RHRPIGIGIQGLADTF +L +P+
Sbjct: 459 SFDFKSLYNVSRVVTNNLNKIIDLNFYPLASAQASNFRHRPIGIGIQGLADTFAILDMPY 518
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS-DR 597
+S EA+ LNK I ETIYY AL S ELA G Y++Y GSP S G+LQ D+WNI S D
Sbjct: 519 DSQEARDLNKKISETIYYGALSQSIELAKLHGTYDSYDGSPASCGLLQFDLWNINQSNDL 578
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
W+W L+ ++ +G+RNSLL+A MPTA+T+QILGNNE FEP+TSN+Y RRVLSGE+ VVN
Sbjct: 579 WNWDELKREMAMHGLRNSLLIAYMPTATTAQILGNNESFEPFTSNLYVRRVLSGEYQVVN 638
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
+HL+ L + ++S + KII NGSV I EIP +KA++KT WEIKQK ++DMAA+R
Sbjct: 639 QHLVDKLVDTNVYSTDIMIKIIKNNGSVQNIDEIPHNIKALFKTAWEIKQKVVLDMAAER 698
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G YIDQSQSLN+ + P + L+S+H Y+W KG+KTGMYYLRT+ AA+ I+FTV +S
Sbjct: 699 GPYIDQSQSLNLFVANPTYKVLSSIHDYSWEKGLKTGMYYLRTKPAANTIQFTVPSS--- 755
Query: 778 NEKANRADND 787
NRA+N+
Sbjct: 756 -SAINRANNE 764
>gi|332022563|gb|EGI62865.1| Ribonucleoside-diphosphate reductase large subunit [Acromyrmex
echinatior]
Length = 748
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/747 (51%), Positives = 516/747 (69%), Gaps = 20/747 (2%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDG KEPV FDKIT R++ L YGL + DP +A +V + GVTT++LD LA
Sbjct: 8 MHVLKRDGHKEPVHFDKITGRIEALCYGLDMNYVDPSAIALRVITNLCSGVTTSELDNLA 67
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA M HPDYA LA R+A+SNLHK TK FSE I ++Y + + + ++++
Sbjct: 68 AETAATMINQHPDYATLASRIAISNLHKETKKVFSEVIANLYYAKSSITNEHLPIISEKY 127
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+II NA L+ AI+YDRDF++ Y FK LE +LLK++ +VVERPQHMLMR++V IH
Sbjct: 128 YQIIQNNADKLNSAILYDRDFNYSYATFKMLESDHLLKLNGKVVERPQHMLMRIAVAIHG 187
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D ++TY+ MS+ +F +A T+ A T Q++S FLL M DSI+GI DTL++ I
Sbjct: 188 EDIDKVIETYNFMSKQYFIYAAQTIDTACTITQQMASTFLLTMSGDSIDGILDTLERFTI 247
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
+ G IG ++H IRA + I GT G SNG+VPML+ + DT+ K +G +Y
Sbjct: 248 LCDYNGEIGFNVHCIRAKNTPIRGTGGVSNGLVPMLKTY-DTSIGTVSKNDKNEGPITVY 306
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DIFEFLDL+++ G+E+ RA+ + Y LW P+LFM+RV DD WSL CP + GL
Sbjct: 307 LEPWHSDIFEFLDLKRSIGEEQLRAKGMCYGLWTPNLFMKRVFDDDVWSLMCPHECPGLI 366
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
++WG EFE LY++YE+EGR + I AR+LW I+ Q ETG PY++FKD CN KSN Q+L
Sbjct: 367 EAWGDEFETLYTKYEQEGRFRRQIKARELWLLIIQIQCETGVPYIIFKDHCNYKSNHQHL 426
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK S+ TE+V++SS +E A+CN ASIA+ +V +S ++F
Sbjct: 427 GTIKCSSFSTEVVQYSSSDEVAMCNTASIAVNMFV------------------NSTKKVF 468
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF +L E+ KI+T NL+K+IDVN YP+ + S +HR IGIG+QGLAD FIL+ PFES
Sbjct: 469 DFYKLKEIAKIVTHNLDKMIDVNVYPLPEAKLSCDKHRSIGIGVQGLADAFILMRYPFES 528
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
EA +LN IFET+YY AL+AS E+A + GPYE+Y SP+S+GILQ DMW++ P++ WDW
Sbjct: 529 KEANELNVQIFETLYYGALEASCEIATEKGPYESYKDSPISEGILQFDMWHVKPTNLWDW 588
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+ I+K+G+RNSLL+A M A +Q+L NN EPY SNIYT LS ++ ++ HL
Sbjct: 589 DILKAKIAKHGLRNSLLIAQMSDAFMAQMLENNMSIEPYMSNIYTIHALSKQYSIIKPHL 648
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
L+DL E GLW + KII+ GS+ I EIPE+LK +YKTVWE+ QKT+ +MAA RG +
Sbjct: 649 LRDLIEKGLWDENMCNKIIFNGGSIQNIEEIPEDLKLLYKTVWEMPQKTIFEMAASRGPF 708
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAW 747
IDQSQ LN+HM P KLTS+HF+AW
Sbjct: 709 IDQSQCLNVHMIDPLE-KLTSMHFFAW 734
>gi|357289663|gb|AET72976.1| ribonucleoside-diphosphate reductase [Phaeocystis globosa virus
12T]
gi|357292461|gb|AET73797.1| ribonucleoside-diphosphate reductase [Phaeocystis globosa virus
14T]
Length = 835
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/836 (49%), Positives = 536/836 (64%), Gaps = 88/836 (10%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR G+KE + FDKI R+KK GL+ ++ ++ KV + ++TT +DEL
Sbjct: 1 MHVIKRSGKKEVISFDKILKRIKKTGKGLNLQNVIYASLSMKVIDQLKDDISTTDIDELT 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+ A+M HPDY LA + VSNLHK T SF +T+K +Y++ + + K L+ DDV
Sbjct: 61 AQQCASMASKHPDYTKLASAITVSNLHKNTDASFYKTVKKLYDF-SDINDNKYKLIHDDV 119
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ K LD I Y+RDF FDYFGFKTLER+YLL++D +VERPQHM MRVS+ IH
Sbjct: 120 MATVEKYQVELDEMIDYNRDFLFDYFGFKTLERAYLLRIDGVIVERPQHMWMRVSICIHG 179
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+ + +TY MS +F HATPTLFNAGTP+PQLSSC+LL M+DDSIEGI++T+K+CA
Sbjct: 180 SNLEKIKETYDYMSNKYFIHATPTLFNAGTPRPQLSSCYLLSMEDDSIEGIFNTVKECAQ 239
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK +GGIGL IHN+R+SGS+I GTNG+SNGI+PML VFN TARYVDQGG KR G+FA+Y
Sbjct: 240 ISKWSGGIGLHIHNVRSSGSHIRGTNGTSNGIIPMLGVFNKTARYVDQGG-KRNGSFAMY 298
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEP H DI EFL+LRKN G EE +ARDLFYA+W D+FMERV + WSLFCP GL+
Sbjct: 299 LEPHHPDIEEFLELRKNHGDEESKARDLFYAIWASDVFMERVIGNKIWSLFCPDKCPGLS 358
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G ++ LY +YE EGR I+AR LW +IL++Q+ETGTPY+L+KD+CN KSNQ+NL
Sbjct: 359 DCYGEDYRTLYMKYESEGRYNKQINARDLWLKILDAQMETGTPYILYKDACNSKSNQKNL 418
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIKSSNLC EIVE+S +ETAVCNLASI L +V E ++ F
Sbjct: 419 GTIKSSNLCCEIVEYSDDKETAVCNLASIGLGMFVNE-------------------DKTF 459
Query: 481 DFERLAEVTKIITENLNKIID--------------------------------------- 501
D+ +LA+VTK++ NLN IID
Sbjct: 460 DYVKLADVTKVLVTNLNNIIDVNFYPNKKTSRSNYRHRPVGIGVQGLADTFFKMDIAFTS 519
Query: 502 -----VNHYPIETT-----RRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIF 551
VN Y ET +SN R G G++ L ++ F E I
Sbjct: 520 EEAKTVNKYIFETIYFAALEKSNDISRERGEGMEYLKTEYVAKKWSFTDQEPDCRTYVIS 579
Query: 552 ETIYYHALKASAELA--------VKD------GPYETYFGSPMSKGILQVDMWNITP-SD 596
+ +K +A+L + D G Y ++ GSP+S G Q D+WN P SD
Sbjct: 580 DET---DVKLAAQLKECKPIKSEIDDLNAGLMGAYSSFIGSPISNGQFQFDLWNEKPCSD 636
Query: 597 RWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVV 656
R+DW +LR I K+G+RNSLL APMPTASTSQILGNNECFEP TSNIY+R+ L+GEF +V
Sbjct: 637 RYDWDTLRAKIVKHGIRNSLLCAPMPTASTSQILGNNECFEPITSNIYSRKTLAGEFTMV 696
Query: 657 NKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAAD 716
NK+L+ +L L LW ++K II GSV I +PE +K YK VWEIK KTL+DMA D
Sbjct: 697 NKYLVDELLALKLWDESVKNNIIANKGSVQYIDGLPEHIKEKYKIVWEIKMKTLIDMARD 756
Query: 717 RGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
RG YI QSQS+N+ ME P+ LT++HFY W G+KTG+YYLR + A +FT++
Sbjct: 757 RGLYICQSQSMNLWMEDPEPKSLTNMHFYGWRAGLKTGIYYLRRKPKHHAQQFTIE 812
>gi|145527768|ref|XP_001449684.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417272|emb|CAK82287.1| unnamed protein product [Paramecium tetraurelia]
Length = 621
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/587 (62%), Positives = 453/587 (77%), Gaps = 20/587 (3%)
Query: 193 MSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSI 252
MSQ +FTHATPTLFN+GTP PQ+SSCFLL M DDSIEGIY+TLK+CA+ISKSAGGIGLS+
Sbjct: 1 MSQKYFTHATPTLFNSGTPYPQMSSCFLLDMVDDSIEGIYETLKRCALISKSAGGIGLSV 60
Query: 253 HNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFL 312
IR+ SYI GTNG SNG+VPML+VFNDTARYVDQGGGKRKG+FAIYLEPWH+DI FL
Sbjct: 61 SKIRSQDSYIRGTNGISNGLVPMLKVFNDTARYVDQGGGKRKGSFAIYLEPWHSDIISFL 120
Query: 313 DLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYS 372
LRKN G EE RARDLF LW+PDLFM+RV+DD W+L CP++ GL D +G EF LY+
Sbjct: 121 QLRKNHGIEEQRARDLFLGLWIPDLFMQRVKDDSDWTLMCPNECPGLQDCYGQEFNKLYT 180
Query: 373 QYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEI 432
YE + ++ + AR+LW EI+++QI TG PYML+KD+CN KSNQ+NLGTIKSSNLCTEI
Sbjct: 181 DYESKNMGRVTMKARQLWQEIIDAQISTGLPYMLYKDACNSKSNQKNLGTIKSSNLCTEI 240
Query: 433 VEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKII 492
++++SP+E AVCNLASI L + ++E ++ F+F++L E+TKII
Sbjct: 241 IQYTSPDEVAVCNLASINLQKLIKE-------------------DKTFNFDKLLEITKII 281
Query: 493 TENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFE 552
T NLN +ID+N YP++ SN R+RPIGIG+QG AD + +PF+S +A +LN IFE
Sbjct: 282 TTNLNIVIDLNFYPVQQAEYSNKRNRPIGIGVQGFADALQRMKIPFDSEDALELNAKIFE 341
Query: 553 TIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGV 612
TIYY A + S ELA + GPYET+ GSP S+GILQ DMW ++P +DW++L++ I K G+
Sbjct: 342 TIYYGACERSLELAQQLGPYETFAGSPASQGILQFDMWGVSPK-LYDWNTLKQNIVKYGM 400
Query: 613 RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSH 672
RNSLL+APMPTASTSQIL NNE FEPYT+NIYTRRVL+GEF+ +N HL+ DL EL LW+
Sbjct: 401 RNSLLIAPMPTASTSQILQNNESFEPYTTNIYTRRVLAGEFVCINPHLVDDLIELNLWTP 460
Query: 673 ALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHME 732
+K K+I NGSV I EIP +K +YKTVWEI QK ++++A R +IDQSQSLNIHM
Sbjct: 461 QIKNKLIMNNGSVQNIDEIPTNIKQLYKTVWEISQKAILNLATSRAPFIDQSQSLNIHMA 520
Query: 733 QPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE 779
+P K+TS+HFYAW KG+KTGMYYLRTR AAD IKFTVD L E
Sbjct: 521 EPTMSKVTSMHFYAWEKGLKTGMYYLRTRPAADPIKFTVDVEALLKE 567
>gi|432101770|gb|ELK29759.1| Ribonucleoside-diphosphate reductase large subunit [Myotis davidii]
Length = 642
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/631 (60%), Positives = 470/631 (74%), Gaps = 57/631 (9%)
Query: 218 CFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQ 277
CFLL MKDDSIEGIYDTLK+CA+ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+
Sbjct: 31 CFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLR 90
Query: 278 VFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFAIYLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDL
Sbjct: 91 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 150
Query: 338 FMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQ 397
FM+RV + WSL CP++ GL + WG EFE LY YE++GR + V+ A++LW+ I+ SQ
Sbjct: 151 FMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQ 210
Query: 398 IETGTPYMLFKDSCN---RKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRY 454
ETGTPYML+KDSC TIK SNLCTEIVE++S +E AVCNLAS+AL Y
Sbjct: 211 TETGTPYMLYKDSCTVXXXXXXXXXXXTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMY 270
Query: 455 VREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSN 514
V + +DF++LAEVTK++ NLNKIID+N+YPI R+N
Sbjct: 271 V-------------------TTEHTYDFKKLAEVTKVVVRNLNKIIDINYYPIPEPIRAN 311
Query: 515 L----------------------------------RHRPIGIGIQGLADTFILLGLPFES 540
+ RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 312 MCKLTQPRWRLICVYRLGVKTEDNIEGSEAYLSNKRHRPIGIGVQGLADAFILMRYPFES 371
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 372 PEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 431
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 432 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 491
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT+++MAA+RG +
Sbjct: 492 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTILNMAAERGAF 551
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 552 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 611
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 612 KASKEEEEKERNTAAMVCSLENRDECLMCGS 642
>gi|12002837|gb|AAG43397.1|AF168794_1 ribonucleotide reductase subunit M1 [Xenopus laevis]
Length = 520
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/539 (67%), Positives = 442/539 (82%), Gaps = 19/539 (3%)
Query: 189 TYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGI 248
TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLLCMKDDSIEGIYDTLK+CA+ISKSAGGI
Sbjct: 1 TYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCALISKSAGGI 60
Query: 249 GLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADI 308
G+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFAIYLEPWH D+
Sbjct: 61 GVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHYDV 120
Query: 309 FEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFE 368
F+FLDL+KN GKEE RARDLFYA+W+PDLFM+RV ++ WSL CP + GL + WG +FE
Sbjct: 121 FDFLDLKKNTGKEEQRARDLFYAMWIPDLFMKRVENNLDWSLMCPHECPGLEEVWGDKFE 180
Query: 369 HLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNL 428
LY +YE EGRA+ V+ A+++W+ I+ SQ ETGTPYML+KD+CNRKSNQQNLGTIK SNL
Sbjct: 181 ELYEKYEREGRARKVVKAQQVWYAIIESQTETGTPYMLYKDACNRKSNQQNLGTIKCSNL 240
Query: 429 CTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEV 488
CTEIVE++S +E AVCNLAS+AL YV + R FDF++LA+V
Sbjct: 241 CTEIVEYTSEKEVAVCNLASLALNMYV-------------------TSERSFDFKKLADV 281
Query: 489 TKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNK 548
TK+I +NLNKII++N YP+ SN +HRPIGIG+QGLAD FIL+ PF+S +AQ LNK
Sbjct: 282 TKVIVKNLNKIIEINFYPVPEAEYSNKKHRPIGIGVQGLADAFILMRYPFQSEKAQMLNK 341
Query: 549 DIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMIS 608
IFETIYY AL++S ELA + GPYETY G P+SKGILQ DMWN+TP+D WDW++L+E I+
Sbjct: 342 QIFETIYYAALESSCELAKELGPYETYEGCPVSKGILQYDMWNVTPTDLWDWTALKEKIA 401
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL+KDLTE G
Sbjct: 402 KYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLMKDLTEQG 461
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSL 727
LW+ +K +II NGS+ + +IP ELK +YKTVWEI QKT++ MAADRG +IDQSQSL
Sbjct: 462 LWNEEMKNQIIANNGSIQNVPDIPAELKELYKTVWEISQKTVITMAADRGAFIDQSQSL 520
>gi|74229829|ref|YP_309033.1| ribonucleotide reductase (rr1) [Trichoplusia ni SNPV]
gi|72259743|gb|AAZ67514.1| ribonucleotide reductase (rr1) [Trichoplusia ni SNPV]
Length = 772
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/773 (50%), Positives = 535/773 (69%), Gaps = 32/773 (4%)
Query: 6 RDGRKEPVRFDKITARLKKLSYGLSK--EHCDPVLVAQKVCAGVYKGVTTTQLDELAAET 63
R+G+ V FD I + L S L+K EH D +A K+ G+Y + + ++ +A
Sbjct: 4 RNGQSAVVDFDSIKSYLYCRSGDLTKNKEHIDFDHIADKIINGIYDNIDQDEFEDYSARV 63
Query: 64 AAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEI 123
A+ T H Y+ LA +A++ LH T++ +S+ + ++ R+G ++ D Y I
Sbjct: 64 CASQTYKHYVYSDLAAMIAINKLHAKTEDDYSKVVDILW-----RNG----VLCDSFYWI 114
Query: 124 IMKNAACLDGAIIYDRDFDFDYFGFKTL-ERSYLLKMDSRVVERPQHMLMRVSVGIHKDD 182
+KNA ++ AI YD D + YFG T+ E YL+++++ VERPQHMLMRV++ IH +D
Sbjct: 115 AVKNANVINAAISYDFDKQYTYFGLMTMIEGGYLMRVNNVTVERPQHMLMRVALQIHGED 174
Query: 183 TDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIIS 242
+SA+++Y LM FTHA+PTLF++G PQ+SSC+LL +++DSI GIY TL CA+IS
Sbjct: 175 IESAIESYRLMRSKLFTHASPTLFSSGMKMPQMSSCYLLNIQEDSINGIYKTLNDCAMIS 234
Query: 243 KSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLE 302
K GGIGL++ IRA+ S I TNG++ G+ P L+VFN R+VDQGG KRKGA A+Y+E
Sbjct: 235 KHGGGIGLNVSQIRAANSKIKSTNGTAAGLGPALRVFNSMLRHVDQGG-KRKGALAVYIE 293
Query: 303 PWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADS 362
PWHADIF FLDL++N G E+ +ARDLF+A+W P LFM+RV KWSL CP + GL D
Sbjct: 294 PWHADIFTFLDLKRNMGAEDMKARDLFFAMWTPSLFMKRVSAGEKWSLMCPDECPGLNDC 353
Query: 363 WGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGT 422
+G EFE LY YE +G+ K I A L +I+ Q+ETG PYML KD+ N K+NQ+NLG
Sbjct: 354 YGEEFERLYESYETQGKFKEQILALDLHRKIIEIQVETGGPYMLHKDNVNEKNNQKNLGV 413
Query: 423 IKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDF 482
I++SNLC EIV++S +ETAVCNLASIA+ + ++ +KN FDF
Sbjct: 414 IRNSNLCAEIVQYSDNKETAVCNLASIAVNCFANKR----------------TKN--FDF 455
Query: 483 ERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPE 542
E L +V +++T NLNKIID N YP+ + + SN +HRPIGIGIQGLAD F +L LP++S +
Sbjct: 456 ESLYKVARVVTNNLNKIIDKNFYPLTSAQVSNFKHRPIGIGIQGLADAFAILNLPYDSQQ 515
Query: 543 AQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS-DRWDWS 601
A++LN+ I ETIYY AL S ELA G Y++Y GSP S G LQ D+WNI+ S D W+W
Sbjct: 516 ARELNRKISETIYYGALSQSIELAKLHGAYDSYNGSPASSGHLQFDLWNISQSNDLWNWD 575
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
L+ ++ +G+RNSLL+A MPTA+T+QILGNNE FEP+TSN+Y RRVLSGE+ +VN+HL+
Sbjct: 576 ELKRQMAIHGLRNSLLIAYMPTATTAQILGNNESFEPFTSNLYVRRVLSGEYQIVNQHLV 635
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
L + ++S L KII NGSV I +IP ++KA++KT WEIKQK L++MAADRG YI
Sbjct: 636 DKLVDCNVYSTELMMKIIKNNGSVQNIDDIPHDVKALFKTAWEIKQKVLLNMAADRGPYI 695
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
DQSQSLN+ + P + L+S+H Y+W KG+KTGMYYLRT+ AA+ I+FTV +S
Sbjct: 696 DQSQSLNLFVANPSYKILSSIHNYSWEKGLKTGMYYLRTKPAANTIQFTVPSS 748
>gi|17158276|ref|NP_477694.1| wsv172 [Shrimp white spot syndrome virus]
gi|6165659|gb|AAF04636.1|AF099142_4 large subunit of ribonucleotide reductase [shrimp white spot
syndrome virus]
gi|15021484|gb|AAK77761.1|AF369029_92 ORF92, putative ribonucleotide reductase large subunit (RR1)
[shrimp white spot syndrome virus]
gi|17016570|gb|AAL33176.1| wsv172 [shrimp white spot syndrome virus]
gi|19481820|gb|AAL89096.1| WSSV228 [shrimp white spot syndrome virus]
gi|417072401|gb|AFX59550.1| wsv172 [White spot syndrome virus]
Length = 848
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/855 (47%), Positives = 554/855 (64%), Gaps = 61/855 (7%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSY-------GLSKEHCDPVLVAQKVCAGVYKGVTTT 54
++ KR+G K+ + +KI R++ L K +P +A + + ++
Sbjct: 9 FISKRNGTKQEISLEKIIKRIENACLPVNQYVPKLDKNAINPQELASHIMDRLPATISFQ 68
Query: 55 QLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITK--NSFSETIKDMYNYYNKRSGKK 112
++D+ A+ A V+HPD+ LAGR SN+HK TK NSFS T + + + + +GK
Sbjct: 69 EMDDFLADYAKTKIVDHPDFGKLAGRFICSNIHKNTKEWNSFSATTQKLRHAIHPGTGKP 128
Query: 113 ASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSR-------VVE 165
AS+V D YE +M NA LD I Y D+ F FG +TLE SYL+K+ S +VE
Sbjct: 129 ASVVNDTYYENVMANAEILDAVIDYKMDYLFTCFGLRTLEYSYLIKIGSPTDRKKRILVE 188
Query: 166 RPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKD 225
RPQ M+MRV+VGIH D S ++TY LMS+H+FTHA+PTLFN GT PQLSSCFLL ++D
Sbjct: 189 RPQDMIMRVAVGIHGSDIKSVIETYDLMSRHYFTHASPTLFNCGTVTPQLSSCFLLGLQD 248
Query: 226 DSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARY 285
DSIEGIYDTLK+ AIISK+AGG+G+ H++RA GS I +G+ G++ LQ+FN + +
Sbjct: 249 DSIEGIYDTLKEAAIISKTAGGLGIHFHDLRAKGSPISSWSGTHPGLMAFLQIFNVSVKK 308
Query: 286 VDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDD 345
V QGG KR+GA AIY+ WH D+ +F+D RKN G E+ R RDLF A+WV DLFMERV+
Sbjct: 309 VSQGGDKRRGAAAIYISDWHLDVKDFIDCRKNAGNEDLRTRDLFPAIWVSDLFMERVKAG 368
Query: 346 GKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYM 405
WSL CP + GL+D G EF+ LY +YE EG+ K V+ AR L+ +I +++IETGTPY+
Sbjct: 369 KNWSLMCPHECPGLSDVHGEEFKALYEKYEAEGKGKEVVKARALFDQINSARIETGTPYV 428
Query: 406 LFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSN 465
FKD+ NRKSNQ+N+G IKSSNLCTEIV++S EETAVCNLASIA+ ++V+ +P
Sbjct: 429 CFKDTINRKSNQENVGIIKSSNLCTEIVQYSDSEETAVCNLASIAVNKFVKYSPIP---- 484
Query: 466 VSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQ 525
S D+ + V KI+T NL+K+IDVN Y ++ TR SN++ RP+G+G+Q
Sbjct: 485 ---------SLRPYVDYREMKRVVKIMTRNLDKVIDVNFYAVDKTRISNMKTRPMGLGVQ 535
Query: 526 GLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDG-PYETYFGSPMSKGI 584
GLAD F L +PFES EA +NK IFETIYY AL+AS E+A + G YE + GSP+SKGI
Sbjct: 536 GLADLFFKLRIPFESEEAALINKRIFETIYYGALEASCEIAKEKGETYELFEGSPLSKGI 595
Query: 585 LQVDMW--NITPSDRW-------DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
Q DM NI D + DW LR I K GV NS+ VAPMPTAST+QILGN+E
Sbjct: 596 FQFDMGKENIKNRDIYFNSLPIHDWEQLRRDIMKYGVHNSMFVAPMPTASTAQILGNSES 655
Query: 636 FEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEEL 695
FEP TSN+Y R VLSG F VVN++++++L +LG W+ K +I+ GS+ + IP+
Sbjct: 656 FEPLTSNMYNRNVLSGSFQVVNEYVIRELIKLGEWNSVTKQRIMASGGSIQTLPNIPKST 715
Query: 696 KAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
K ++KTVWEI +T +DMA RG ++DQ+QSLN+ +E+P+ K+ S+ YAW KG+KT +
Sbjct: 716 KELFKTVWEINPRTTLDMAIQRGMFVDQAQSLNLFVEEPELSKVRSMTMYAWEKGIKT-L 774
Query: 756 YYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQV-------------------- 795
YYLRT+ AA A++FTVD +VL E A + V A A V
Sbjct: 775 YYLRTKGAARAVQFTVDKNVL-QEVKKEAPSPVAAFSAPVREEEEEKKSSIVVPDPAAAL 833
Query: 796 VCSLKNQEECMACGS 810
+CS+ N C C S
Sbjct: 834 LCSINNPGACEMCSS 848
>gi|14581686|gb|AAK69359.1|AF132669_1 ribonucleotide reductase large subunit RR1 [shrimp white spot
syndrome virus]
Length = 848
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/855 (47%), Positives = 553/855 (64%), Gaps = 61/855 (7%)
Query: 2 YVIKRDGRKEPVRFDKITARLKKLSY-------GLSKEHCDPVLVAQKVCAGVYKGVTTT 54
++ KR+G K+ + +KI R++ L K +P +A + + ++
Sbjct: 9 FISKRNGTKQEISLEKIIKRIENACLPVNQYVPKLDKNAINPQELASHIMDRLPATISFQ 68
Query: 55 QLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITK--NSFSETIKDMYNYYNKRSGKK 112
++D+ A+ A V+HPD+ LAGR SN+HK TK NSFS T + + + + +GK
Sbjct: 69 EMDDFLADYAKTKIVDHPDFGKLAGRFICSNIHKNTKEWNSFSATTQKLRHAIHPGTGKP 128
Query: 113 ASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSR-------VVE 165
AS+V D YE +M NA LD I Y D+ F FG +TLE SYL+K+ S +VE
Sbjct: 129 ASVVNDTYYENVMANAEILDAVIDYKMDYLFTCFGLRTLEYSYLIKIGSPTDRKKRILVE 188
Query: 166 RPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKD 225
RPQ M+MRV+VGIH D S ++TY LMS+H+FTHA+PTLFN GT PQLSSCFLL ++D
Sbjct: 189 RPQDMIMRVAVGIHGSDIKSVIETYDLMSRHYFTHASPTLFNCGTVTPQLSSCFLLGLQD 248
Query: 226 DSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARY 285
DSIEGIYDTLK+ AIISK+AGG+G+ H++RA GS I +G+ G++ LQ+FN + +
Sbjct: 249 DSIEGIYDTLKEAAIISKTAGGLGIHFHDLRAKGSPISSWSGTHPGLMAFLQIFNVSVKK 308
Query: 286 VDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDD 345
V QGG KR+GA AIY+ WH D+ +F+D RKN G E+ R RDL A+WV DLFMERV+
Sbjct: 309 VSQGGDKRRGAAAIYISDWHLDVKDFIDCRKNAGNEDLRTRDLLPAIWVSDLFMERVKAG 368
Query: 346 GKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYM 405
WSL CP + GL+D G EF+ LY +YE EG+ K V+ AR L+ +I +++IETGTPY+
Sbjct: 369 KNWSLMCPHECPGLSDVHGEEFKALYEKYEAEGKGKEVVKARALFDQINSARIETGTPYV 428
Query: 406 LFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSN 465
FKD+ NRKSNQ+N+G IKSSNLCTEIV++S EETAVCNLASIA+ ++V+ +P
Sbjct: 429 CFKDTINRKSNQENVGIIKSSNLCTEIVQYSDSEETAVCNLASIAVNKFVKYFPIP---- 484
Query: 466 VSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQ 525
S D+ + V KI+T NL+K+IDVN Y ++ TR SN++ RP+G+G+Q
Sbjct: 485 ---------SLRPYVDYREMKRVVKIMTRNLDKVIDVNFYAVDKTRISNMKTRPMGLGVQ 535
Query: 526 GLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDG-PYETYFGSPMSKGI 584
GLAD F L +PFES EA +NK IFETIYY AL+AS E+A + G YE + GSP+SKGI
Sbjct: 536 GLADLFFKLRIPFESEEAALINKRIFETIYYGALEASCEIAKEKGETYELFEGSPLSKGI 595
Query: 585 LQVDMW--NITPSDRW-------DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
Q DM NI D + DW LR I K GV NS+ VAPMPTAST+QILGN+E
Sbjct: 596 FQFDMGKENIKNRDIYFNSLPIHDWEQLRRDIMKYGVHNSMFVAPMPTASTAQILGNSES 655
Query: 636 FEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEEL 695
FEP TSN+Y R VLSG F VVN++++++L +LG W+ K +I+ GS+ + IP+
Sbjct: 656 FEPLTSNMYNRNVLSGSFQVVNEYVIRELIKLGEWNSVTKQRIMASGGSIQTLPNIPKST 715
Query: 696 KAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
K ++KTVWEI +T +DMA RG ++DQ+QSLN+ +E+P+ K+ S+ YAW KG+KT +
Sbjct: 716 KELFKTVWEINPRTTLDMAIQRGMFVDQAQSLNLFVEEPELSKVRSMTMYAWEKGIKT-L 774
Query: 756 YYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQV-------------------- 795
YYLRT+ AA A++FTVD +VL E A + V A A V
Sbjct: 775 YYLRTKGAARAVQFTVDKNVL-QEVKKEAPSPVAAFSAPVREEEEEKKSSIVVPDPAAAL 833
Query: 796 VCSLKNQEECMACGS 810
+CS+ N C C S
Sbjct: 834 LCSINNPGACEMCSS 848
>gi|215401540|ref|YP_002332844.1| RR1 [Spodoptera litura nucleopolyhedrovirus II]
gi|209484081|gb|ACI47514.1| RR1 [Spodoptera litura nucleopolyhedrovirus II]
Length = 904
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/799 (49%), Positives = 536/799 (67%), Gaps = 49/799 (6%)
Query: 14 RFDKITARLKKLS-YGLSKEHCDPVLVAQKVCAGVYK-GVTTTQLDELAAETAAAMTVNH 71
+ D +T L LS + + D + QK+ + + GV+ Q+ A+ AA+MT H
Sbjct: 149 KLDNLTILLNNLSGKDIDTRYVDVPKLMQKIKESINENGVSFEQMKLYCADVAASMTYIH 208
Query: 72 PDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACL 131
DYALLAGR+ V +LH F E NY + ++V+ + +++K+ A L
Sbjct: 209 YDYALLAGRILVEDLHNKVCPCFVEVT----NYL-----AQNNVVSHEFNNLVVKHGALL 259
Query: 132 DGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYH 191
+ I ++RD+D+ YFGFKTL YLLK++ + ERPQHMLMRV++ IH DD SA++TY
Sbjct: 260 NREIKHNRDYDYKYFGFKTLTNGYLLKVNDVIAERPQHMLMRVALAIHGDDVMSAIETYQ 319
Query: 192 LMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLS 251
LMS FTHA+PTLF AGT +PQ+ SCFL C+K+DSI+GIY TL + A+IS GG+GLS
Sbjct: 320 LMSLGTFTHASPTLFAAGTCRPQMCSCFLQCIKEDSIDGIYKTLHESALISNLGGGLGLS 379
Query: 252 IHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEF 311
+ ++ A +GT S G+V ML+VFN+ R+VDQGG KRKGA A Y+EPWH +I++
Sbjct: 380 VQSVSAQ---YNGTT-KSGGLVSMLRVFNNMVRHVDQGG-KRKGALAAYVEPWHPEIYDV 434
Query: 312 LDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLY 371
L+LR+N G E+ +ARDL LW+PDLFMERV+++ +WSLFCP GL D +G FE LY
Sbjct: 435 LNLRRNMGSEDAKARDLMLGLWIPDLFMERVKENKEWSLFCPKKYPGLLDEYGSSFEILY 494
Query: 372 SQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTE 431
+YE+ + + AR L+ I+ + +ETG PYML+KD CN+ SNQ+NLG IK SNLC E
Sbjct: 495 EKYEKNKLYERQVKARDLFRFIVETNVETGGPYMLYKDPCNKFSNQKNLGIIKCSNLCAE 554
Query: 432 IVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKI 491
IV++ +ETAVCNLASIA+ + V + K + FD+ L +TKI
Sbjct: 555 IVQYCDKDETAVCNLASIAVNKCV------------------NVKTKTFDYVLLNRLTKI 596
Query: 492 ITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIF 551
+ NLNKIID NHYP SN +HRP+G+GIQGLAD F+LL +P++S EA+ +N I
Sbjct: 597 VVRNLNKIIDSNHYPTAGAANSNKKHRPVGVGIQGLADAFVLLDIPYDSEEARSVNYMIA 656
Query: 552 ETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-WDWSSLREMISKN 610
ETIY+ AL+AS ELA DGPYE+Y SP+ +G + D +NI P+D W+WS LRE I ++
Sbjct: 657 ETIYFSALEASCELAKIDGPYESYENSPLFRGTMHYDNYNIYPTDHLWNWSKLREKIQRH 716
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLW 670
GVRNSLLVA MPTA+T+QILGNNE FEP+TSN+Y RRVL+GEF VVN++L+K L +L ++
Sbjct: 717 GVRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRRVLAGEFQVVNQYLIKALVDLNIY 776
Query: 671 SHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIH 730
+ L+ KI+ ENGSV I EIP+ +K ++KT WEIK K ++DMAADR +IDQSQSLN+
Sbjct: 777 TPELRNKILAENGSVQNIDEIPQHVKDLFKTAWEIKSKCMIDMAADRAPFIDQSQSLNLF 836
Query: 731 MEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDT-SVLNNEKANRADNDVE 789
+ +P + ++S+HFY W K +KTGMYYLRT+ AA A +FTVD + + K + D+D
Sbjct: 837 VAEPTYSVMSSIHFYTWQKQLKTGMYYLRTKPAAQATQFTVDAEAAASCGKKRKMDDD-- 894
Query: 790 ANLAQVVCSLKNQEECMAC 808
EECM+C
Sbjct: 895 -----------GTEECMSC 902
>gi|269105097|ref|ZP_06157792.1| ribonucleotide reductase of class Ia (aerobic) alpha subunit
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268160732|gb|EEZ39230.1| ribonucleotide reductase of class Ia (aerobic) alpha subunit
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 647
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/658 (56%), Positives = 470/658 (71%), Gaps = 30/658 (4%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSF 94
+P+ VAQ+V +G+Y G+ T++D AETAA++ HPDYA LA RV VS+L K T
Sbjct: 9 EPIAVAQRVVSGLYDGIKVTEIDVFLAETAASLATEHPDYAKLAARVMVSSLQKETSGYA 68
Query: 95 SETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERS 154
+ T R + +++ + + KN L+ I Y RD+ FDYFG+KTLERS
Sbjct: 69 TAT----------RELSEIGILSSAYVDFVAKNQFALEDMIDYKRDYQFDYFGYKTLERS 118
Query: 155 YLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQ 214
YLLK+ VVERPQ M MRV+V + DD + + Y L+S ++THATPTLFNAG Q
Sbjct: 119 YLLKVKGVVVERPQDMFMRVAVAVAGDDLEEIRELYDLLSLCYYTHATPTLFNAGCKMQQ 178
Query: 215 LSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVP 274
LSSCFLL M++DSI GIYDTLK CA+ISKSAGGIGL IHNIRA+G+ I GTNG SNGIVP
Sbjct: 179 LSSCFLLAMQEDSINGIYDTLKDCALISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVP 238
Query: 275 MLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWV 334
ML+VFN+TARYVDQGGGKRKG+FA+YLEPWHADI FLDLRKN GKEE RARDLF ALWV
Sbjct: 239 MLKVFNETARYVDQGGGKRKGSFAVYLEPWHADIESFLDLRKNHGKEEFRARDLFLALWV 298
Query: 335 PDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEIL 394
PDLFMERV D +W+LF P + GL+D +G EF Y +YE G I AR+L +I+
Sbjct: 299 PDLFMERVETDAEWTLFSPHNTKGLSDLYGAEFTQKYQEYERMGLGVKTIKARQLMTQII 358
Query: 395 NSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRY 454
SQ ETGTPYML+KD+CN KSNQ+NLGTIKSSNLC EI+E S+P+ETA CNLAS+ALP++
Sbjct: 359 ESQAETGTPYMLYKDACNEKSNQKNLGTIKSSNLCAEIMEVSTPDETAACNLASLALPKF 418
Query: 455 VREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSN 514
V G FDF++L +VTK+ +NL+++IDVN++P + +SN
Sbjct: 419 VTNTG--------------------FDFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSN 458
Query: 515 LRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYET 574
HRP+G+GIQGLAD F + LPF+S EA LN+DI ET+Y+ +L+AS E+A + G Y +
Sbjct: 459 HAHRPVGLGIQGLADVFFKMHLPFDSEEALLLNRDIAETMYHASLEASCEIAKQKGTYSS 518
Query: 575 YFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNE 634
Y GSP+S G Q D+W PS RWDWS L+ I+++GVRNSLL+A MPTAST+QILGNNE
Sbjct: 519 YDGSPISHGQFQFDLWCEQPSSRWDWSQLKHQIAEHGVRNSLLIAQMPTASTAQILGNNE 578
Query: 635 CFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
FE TSNIY R+ LSGEFI++NK+L+ DL + GLW+ ++ II NGSV I IP
Sbjct: 579 AFEAQTSNIYKRQTLSGEFIIINKYLVSDLEQRGLWTSKIRDAIILNNGSVQGIDAIP 636
>gi|219118138|ref|XP_002179850.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408903|gb|EEC48836.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 926
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/810 (50%), Positives = 530/810 (65%), Gaps = 103/810 (12%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
++V KRDGR E + K+ RL LS GL + V + + + G+Y VTT ++D LA
Sbjct: 67 LHVSKRDGRLELLDSTKLLQRLTDLSDGLDMRFLNLVALTESIVRGMYPNVTTHEIDVLA 126
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA++ HPDY LA R+ ++ HK T FSE I+ +YN SGK + V
Sbjct: 127 AETAASLGTQHPDYGRLAARILITQNHKTTPTCFSEAIETLYN-----SGK--GFIDHKV 179
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS--RVVERPQHMLMRVSVGI 178
E++ + +D I+++RD + YFG+KTLER+YLLK D+ +V+ERPQ+++MRV++GI
Sbjct: 180 GELVRRRGPEIDSRIVHERDLEMTYFGYKTLERAYLLKKDNGNQVLERPQYLMMRVALGI 239
Query: 179 H---------KDDT-DSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSI 228
H +DD ++A +TY LMS+ +FTHA+PTLF+AGT PQLSSCFL+ M +DSI
Sbjct: 240 HCTSKMSSRSEDDCLEAAFETYDLMSRGFFTHASPTLFHAGTTHPQLSSCFLVQMSEDSI 299
Query: 229 EGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQ 288
GIYDTLK+CA+ISK+AGGIGLS+HNIRA G+ I GT G SNG+VPML+VF+ T+RYVDQ
Sbjct: 300 NGIYDTLKRCAVISKAAGGIGLSVHNIRARGTPIQGTRGVSNGLVPMLRVFDVTSRYVDQ 359
Query: 289 GGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKW 348
GGGKR GAFAIYLEPWHADIF+ L L+KN GKEE RARDLFY LW+PDLFM+RV +D W
Sbjct: 360 GGGKRPGAFAIYLEPWHADIFDVLSLKKNHGKEEQRARDLFYGLWIPDLFMKRVEEDDVW 419
Query: 349 SLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFK 408
SL CP GLA +G +FE LY YE+EG+ + AR+LW IL SQIETGTPYML+K
Sbjct: 420 SLMCPHQCPGLAHCYGAKFEALYQHYEQEGKFVRQVRARELWGAILESQIETGTPYMLYK 479
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D+CN KSNQQN+GTI+ SNLCTEI+++S EETAVCNLASI LPR+V V +
Sbjct: 480 DTCNTKSNQQNIGTIQCSNLCTEIIQYSDQEETAVCNLASICLPRFV----VSERGTFGS 535
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
+ S +S + FD E L KI+T NLN IIDVN YP++ + SN +HRPIGIG+ GLA
Sbjct: 536 I--SPESGSAFFDHEALHRAAKIVTRNLNSIIDVNSYPVDGAKTSNFKHRPIGIGVSGLA 593
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D F+ LGLPF S A++LN+ IFETIY+ AL+ASAELA K+GPYET+ GSP S+G LQ +
Sbjct: 594 DAFLRLGLPFTSAAAKKLNEAIFETIYHAALEASAELAEKEGPYETFAGSPASQGKLQFN 653
Query: 589 MWNI----TPSDR----------------------WDWSSLREMISKNGVRNSLLVAPMP 622
+W + TPS + +DW SLR I K G+RNSL A
Sbjct: 654 LWGLSDDETPSHKYALAKETPVPIQMYPNSSNVCGYDWESLRRRIVKTGLRNSLSWASTS 713
Query: 623 TASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYEN 682
+S S + + +++ +
Sbjct: 714 VSSLS-------------------------------------------AQTFRNQMMRDG 730
Query: 683 GSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSL 742
GSV I +IP+ LK +YKTVWEIK K ++DM ADRG +IDQ+ P+ KLT++
Sbjct: 731 GSVQNIPDIPDRLKELYKTVWEIKMKDIIDMGADRGKFIDQN---------PNMDKLTAM 781
Query: 743 HFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
HFYAW KG+KTGMYYLRT+ A +AI++TV+
Sbjct: 782 HFYAWKKGLKTGMYYLRTKPAVNAIQYTVE 811
>gi|300707604|ref|XP_002996003.1| hypothetical protein NCER_100976 [Nosema ceranae BRL01]
gi|239605258|gb|EEQ82332.1| hypothetical protein NCER_100976 [Nosema ceranae BRL01]
Length = 800
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/746 (48%), Positives = 512/746 (68%), Gaps = 29/746 (3%)
Query: 42 KVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDM 101
K+ +G+ +T + AAETA +MT H DY + ++ + L + T +SF + +
Sbjct: 66 KIESGLCDDITVEEFISFAAETADSMTTKHYDYGRFSAKILMEYLKENTLDSFFAKVDYI 125
Query: 102 YNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS 161
Y K ++ Y I++ N LD + Y +D + YF TL+R+YLL +D
Sbjct: 126 Y--------KNGDFYSEKFYNIVLDNKKFLDELVDYSKDDSWTYFAILTLKRAYLLTLDG 177
Query: 162 RVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLL 221
+ +ERPQ ML+RV+V +H D+ ++ +TY L+S + +TH +PT+FN+G+ + QL+SCFLL
Sbjct: 178 QTIERPQDMLLRVAVQLHGDNLENVKETYELLSNNMYTHGSPTIFNSGSKKSQLASCFLL 237
Query: 222 CMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFND 281
++++EG+++T+K+C ISKS GG+ L +H++ A G+ I T G S GI+P +QV N
Sbjct: 238 TPIEETVEGLFETVKRCVQISKSGGGVALDLHDMAAKGTSIRKTGGISKGIIPYIQVLNW 297
Query: 282 TARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMER 341
+ +Y+ Q G +R G AIYLEPWH DIF+FLDLRK+ GK+E RARD+F +W+ DLFM+R
Sbjct: 298 SLKYIGQAGSRRSGCPAIYLEPWHKDIFDFLDLRKSIGKDELRARDVFTGMWINDLFMKR 357
Query: 342 VRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETG 401
V + WSLFCP GL++++G EFE +Y +YE++ +V+ A+K+W I+ SQIETG
Sbjct: 358 VEANEDWSLFCPKSVPGLSNAYGKEFEDMYLEYEKKVDC-VVVPAQKVWKAIIESQIETG 416
Query: 402 TPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVP 461
TPYML+KD+ N SNQ+N+GTI+ SNLCTEIV+++SP+E AVCNLASI LP++V
Sbjct: 417 TPYMLYKDTINNLSNQKNIGTIRCSNLCTEIVQYTSPDEVAVCNLASICLPKFVI----- 471
Query: 462 VQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIG 521
N FDF V KI+T+N N +ID N YP++ +SN +HRPIG
Sbjct: 472 ---------------NGEFDFNLFKSVVKIVTKNANIVIDCNFYPLKEAEKSNKKHRPIG 516
Query: 522 IGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMS 581
+G+QGLAD F++L LP+ES A++LNK+IFET+Y+ AL++S E A K GPYE+Y GSP+S
Sbjct: 517 LGVQGLADVFLMLRLPYESEGARKLNKEIFETLYFGALESSCEEAEKYGPYESYNGSPIS 576
Query: 582 KGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTS 641
KGI +M N + + RW+W LR+ I K GVRNSLL+APMPTA TSQI NNE FEP+TS
Sbjct: 577 KGIFHWEMANSSTTGRWNWEELRKKILKYGVRNSLLIAPMPTAGTSQIFNNNEAFEPFTS 636
Query: 642 NIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKT 701
NIYTRR GEF +VN++L+ DL +L +WS +K I+ + GS+ IS IPEE+K +YKT
Sbjct: 637 NIYTRRTACGEFQMVNRYLMNDLIKLNMWSPEIKNYIVEQEGSIQNISGIPEEIKELYKT 696
Query: 702 VWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTR 761
VWEIK K ++D+AADR ++DQ+QSLN+ + +P + L+S+HFY W +G+KTGMYYLRTR
Sbjct: 697 VWEIKMKCVIDLAADRQAFVDQTQSLNLFVAKPTYPILSSMHFYGWKRGLKTGMYYLRTR 756
Query: 762 AAADAIKFTVDTSVLNNEKANRADND 787
AIKFTVD +L + N A N+
Sbjct: 757 PITSAIKFTVDLDMLKKVEKNEATNE 782
>gi|448931980|gb|AGE55540.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus MN0810.1]
Length = 763
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/782 (48%), Positives = 514/782 (65%), Gaps = 45/782 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKE-----------HCDPVLVAQKVCAGVYK 49
M V+KRDG E V FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVVKRDGSSEAVSFDKIMTRIGRLCWAENAKPSHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS 109
+TT QLD+L A+ AA+M HPDY +LA R+AVSNLHK T +S ET M
Sbjct: 67 NITTVQLDDLTADKAASMVTTHPDYGILAARIAVSNLHKQTSDSVLETYAKM-------- 118
Query: 110 GKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQH 169
+S+++D+ +++ N + YDRD+DFDYFGF T++R YL K+D +V ERPQH
Sbjct: 119 ---SSMLSDEFLQVVRNNEQAFQSLVNYDRDYDFDYFGFSTMKRLYLTKVDGKVTERPQH 175
Query: 170 MLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
+RV++ + +D +TY +S+ FTHA+PTLFNAG L+SCFL+ + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFKNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
I+ +L A +SK GGIGL + +IR GS I GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHMSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+W+ DLFM+RV D +WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVETDAQWS 353
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD 409
LF P + GL D++G E+E LY++YE EGRAK V+ AR +W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEELYTKYETEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
S N K+ Q N GTIK SNLC EIVE++S +E AVC + SI L YV
Sbjct: 414 SVNAKNMQSNAGTIKGSNLCAEIVEYTSTDEAAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
KN +DFE L + KI+ +NL+K IDV Y I R SNLR RPIG+G+QGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEARTSNLRRRPIGVGVQGLQD 513
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
F L LPF+S A+ LN++IFE IY+ A++AS ELA + GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRLPFDSDAARNLNREIFENIYFAAVEASCELADEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL 649
WN P DW L E + K GVRNSL A MPTAST+QI G+ E EP TSN+Y+RR L
Sbjct: 574 WNSEPVTSLDWKGLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L++DL G WS A+K +II GS+ ++ I ELKA+YKT WE+ KT
Sbjct: 633 AGEFPVVNSYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAVYKTAWELSMKT 692
Query: 710 LVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKF 769
++D+AADRG ++DQ+QS+N+ + P +TS+ FYAW KG+KT YYLR++ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKTMTSMLFYAWKKGLKTLQYYLRSKPAANAIAV 752
Query: 770 TV 771
TV
Sbjct: 753 TV 754
>gi|298707147|emb|CBJ29920.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 821
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/690 (53%), Positives = 490/690 (71%), Gaps = 43/690 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V+KRDGR+EPV FDKITAR+++L +GL + + DPVLVAQKV G+Y GVTT +LD LA
Sbjct: 173 MHVVKRDGRREPVMFDKITARIRRLCWGLDERYIDPVLVAQKVVQGIYSGVTTWELDTLA 232
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AET A M HP YA LA R++VSNL + T SF++T+++++ Y + ++G++A ++D+V
Sbjct: 233 AETCAYMNTEHPHYARLAARISVSNLQRATSPSFADTVEELHAYVDPKTGRQAGYISDEV 292
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+EI+MKN +D + ++RDF D+FGFKTLER+YLLK+ +V+ERPQ+M MR+++GIH
Sbjct: 293 HEIVMKNRDLIDAEVKHERDFSLDFFGFKTLERAYLLKLGDKVMERPQYMFMRIAIGIHG 352
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D ++A +TYHLMS+ WF HA+PTLF+AGT QPQLSSCFLL K+DSI GIYDTLK+
Sbjct: 353 EDLEAAFETYHLMSEKWFIHASPTLFHAGTCQPQLSSCFLLTTKEDSIAGIYDTLKQWHS 412
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARY-VDQGGGKRKGAFAI 299
+ G G + + +S + + +N L F + R +D +
Sbjct: 413 V---GAGAGFVLAVVVSSSVCVGSISVRAN-----LPTFLCSPRLKID----------PV 454
Query: 300 YLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGL 359
H +F L L K RDLFY LW+PDLFMERV DG+WSL CPS GL
Sbjct: 455 SCPCSHQPMFP-LPLCTQPLK-----RDLFYGLWIPDLFMERVEQDGEWSLMCPSQCPGL 508
Query: 360 ADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQN 419
++ WG EFE LY++YE EG+ + A+ LWF IL++Q ETG PYM++KD+CNRKSN ++
Sbjct: 509 SECWGKEFEELYTKYEREGKYMRKVRAQDLWFAILDAQTETGNPYMMYKDACNRKSNHKH 568
Query: 420 LGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRL 479
LGTI+SSNLCTEIVE++ P E AVCNL S+ LP++V E G +
Sbjct: 569 LGTIQSSNLCTEIVEYTDPGEVAVCNLGSVVLPKFVSEDG------------------KS 610
Query: 480 FDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFE 539
FD +RL EVTK+ NLNKIIDVN YP+E + SN RHRP+GIG+QGLAD FI + +PFE
Sbjct: 611 FDHQRLFEVTKVFVRNLNKIIDVNWYPVEEAQHSNARHRPMGIGVQGLADAFIKMRMPFE 670
Query: 540 SPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWD 599
S A+ LN+DIFET+Y+ A+ AS ELA K+GPYET+ GSP+SKGI Q DMW TPSDRWD
Sbjct: 671 SEGARALNRDIFETMYFAAMTASCELAEKEGPYETFEGSPVSKGIFQFDMWGETPSDRWD 730
Query: 600 WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 659
W+SLR ++K+GVRNSLL+APMPTAST+QILG NEC EPYTSN+Y RRV +GEFIVVN H
Sbjct: 731 WASLRTRVAKHGVRNSLLLAPMPTASTAQILGFNECIEPYTSNLYARRVKAGEFIVVNPH 790
Query: 660 LLKDLTELGLWSHALKTKIIYENGSVSKIS 689
L DL E+GLWS +++ +++ GS++ I+
Sbjct: 791 LFTDLMEMGLWSPSVRNQLMASGGSIASIA 820
>gi|448932314|gb|AGE55873.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus MO0605SPH]
gi|448936443|gb|AGE59990.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus WI0606]
Length = 763
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/787 (48%), Positives = 521/787 (66%), Gaps = 45/787 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKE-----------HCDPVLVAQKVCAGVYK 49
M VIKRDG E V FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS 109
+TT QLD+L A+ AA+M NHPDY +LA R+AVSNLHK + S+++ D Y
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQS----SDSVVDTYT------ 116
Query: 110 GKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQH 169
K +S+++D+ +++ + + YDRD+DFDYFGF T++R YL K+D +VVERPQH
Sbjct: 117 -KMSSMLSDEFMQVVRAHEQEFQALVKYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
+RV++ + +DT +TY +S+ FTHA+PTLFNAG L+SCFL+ + DDS+
Sbjct: 176 TYLRVAIALWGEDTAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
I+ +L A +SK GGIGL + +IR GS I GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+W+ DLFM+RV D WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD 409
LF P + GL D++G E+E LY +YE EGRAK V+ AR +W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
S N K+ Q N GTIK SNLC EIVE++S +ETAVC + SI L YV
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
KN +DFE L + KI+T+NL+K IDV Y I + SN+R RPIG+G+QGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILTKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
F L +PF+S A+ LN++IFE IY+ A++AS ELA + GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL 649
W P R DW +L E + K GVRNSL A MPTAST+QI G+ E EP TSN+Y+RR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L++DL G WS A+K +II GS+ ++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKF 769
++D+AADRG ++DQ+QS+N+ + P ++S+ FYAW KG+KT MYY R++ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMSSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TVDTSVL 776
TV L
Sbjct: 753 TVGEECL 759
>gi|448926493|gb|AGE50069.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus Canal-1]
Length = 763
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/782 (48%), Positives = 515/782 (65%), Gaps = 45/782 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKE-----------HCDPVLVAQKVCAGVYK 49
M VIKRDG E V FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MTVIKRDGSSEAVSFDKIMTRIGRLCWPENAKPSHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS 109
+TT QLD+L A+ AA+M NHPDY +LA R+++SNLHK T +S S+T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARISISNLHKQTSDSVSDTYARM-------- 118
Query: 110 GKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQH 169
+S+++D+ +I+ N + YDRD+DFDYFGF T++R YL K+D +VVERPQH
Sbjct: 119 ---SSMLSDEFMQIVHDNEHAFQSLVNYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
+RV++ + D + +TY +S+ FTHA+PTLFNAG L+SCFL+ + DDS+
Sbjct: 176 TYLRVAIALWGGDIEKVKETYDALSRRKFTHASPTLFNAGFKNANLASCFLVHV-DDSLS 234
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
I+ +L A +SK GGIGL + +IR GS I GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHMSDIRGRGSRIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+W+ DLFM+RV D WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVETDAAWS 353
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD 409
LF P + GL D++G E+E LY++YE EGRAK ++ AR +W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEELYARYETEGRAKKIVKARDVWNAMIVTQIETGMPYVLNKD 413
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
S N K+ Q N GTIK SNLC EIVE++S +E AVC + SI L YV
Sbjct: 414 SVNAKNMQSNAGTIKGSNLCAEIVEYTSTDEAAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
KN ++DFE L + K + +NL++ IDV Y I R SNLR RPIG+G+QGL D
Sbjct: 460 ------KNGVYDFEDLRKHVKTLAKNLDRSIDVMSYAIPEARTSNLRRRPIGVGVQGLQD 513
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
F L LPF+S A+ LN++IFE IY+ A++AS ELA + GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRLPFDSDAARNLNREIFEHIYFAAVEASCELADEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL 649
W P DW L E + K GVRNSL A MPTAST+QI G+ E EP TSN+Y+RR L
Sbjct: 574 WGTEPVTHLDWKGLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L++DL G WS A+K +II GS+ ++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKF 769
++D+AADRG ++DQ+QS+N+ + P LTS+ FYAW KG+KT YYLR++ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSLTSMLFYAWKKGLKTLQYYLRSKPAANAIAV 752
Query: 770 TV 771
T+
Sbjct: 753 TI 754
>gi|448935771|gb|AGE59320.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus OR0704.3]
Length = 763
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/787 (48%), Positives = 519/787 (65%), Gaps = 45/787 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKE-----------HCDPVLVAQKVCAGVYK 49
M VIKRDG E V FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS 109
+TT QLD+L A+ AA+M NHPDY +LA R+AVSNLHK + S+++ D Y
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQS----SDSVVDTYT------ 116
Query: 110 GKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQH 169
K +S+++D+ +++ + + YDRD+DFDYFGF T++R YL K+D +VVERPQH
Sbjct: 117 -KMSSMLSDEFMQVVRVHEQEFQALVKYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
+RV++ + +D +TY +S+ FTHA+PTLFNAG L+SCFL+ + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
I+ +L A +SK GGIGL + +IR GS I GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+W+ DLFM+RV D WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD 409
LF P + GL D++G E+E LY +YE EGRAK V+ AR +W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
S N K+ Q N GTIK SNLC EIVE++S +ETAVC + SI L YV
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
KN +DFE L + KI+ +NL+K IDV Y I + SN+R RPIG+G+QGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
F L +PF+S A+ LN++IFE IY+ A++AS ELA + GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL 649
W P R DW +L E + K GVRNSL A MPTAST+QI G+ E EP TSN+Y+RR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L++DL G WS A+K +II GS+ ++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKF 769
++D+AADRG ++DQ+QS+N+ + P +TS+ FYAW KG+KT MYY R++ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMTSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TVDTSVL 776
TV L
Sbjct: 753 TVGEECL 759
>gi|448925806|gb|AGE49384.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus Can0610SP]
Length = 763
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/787 (48%), Positives = 519/787 (65%), Gaps = 45/787 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKE-----------HCDPVLVAQKVCAGVYK 49
M VIKRDG E V FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS 109
+TT QLD+L A+ AA+M NHPDY +LA R+AVSNLHK + S+++ D Y
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQS----SDSVVDTYT------ 116
Query: 110 GKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQH 169
K +S+++D+ +++ + + YDRD+DFDYFGF T++R YL K+D +VVERPQH
Sbjct: 117 -KMSSMLSDEFMQVVRAHEQEFQTLVKYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
+RV++ + +D +TY +S+ FTHA+PTLFNAG L+SCFL+ + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
I+ +L A +SK GGIGL + +IR GS I GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+W+ DLFM+RV D WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD 409
LF P + GL D++G E+E LY +YE EGRAK V+ AR +W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
S N K+ Q N GTIK SNLC EIVE++S +ETAVC + SI L YV
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
KN +DFE L + KI+ +NL+K IDV Y I + SN+R RPIG+G+QGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
F L +PF+S A+ LN++IFE IY+ A++AS ELA + GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL 649
W P R DW +L E + K GVRNSL A MPTAST+QI G+ E EP TSN+Y+RR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L++DL G WS A+K +II GSV ++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSVQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKF 769
++D+AADRG ++DQ+QS+N+ + P +TS+ FYAW KG+KT MYY R++ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMTSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TVDTSVL 776
TV L
Sbjct: 753 TVGEECL 759
>gi|448932971|gb|AGE56528.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus NE-JV-2]
Length = 763
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/787 (48%), Positives = 519/787 (65%), Gaps = 45/787 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKE-----------HCDPVLVAQKVCAGVYK 49
M VIKRDG E V FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS 109
+TT QLD+L A+ AA+M NHPDY +LA R+AVSNLHK + S+++ D Y
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQS----SDSVVDTYT------ 116
Query: 110 GKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQH 169
K +S+++D+ +++ + + YDRD+DFDYFGF T++R YL K+D +VVERPQH
Sbjct: 117 -KMSSMLSDEFMQVVRAHEQEFQALVKYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
+RV++ + +D +TY +S+ FTHA+PTLFNAG L+SCFL+ + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
I+ +L A +SK GGIGL + +IR GS I GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+W+ DLFM+RV D WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD 409
LF P + GL D++G E+E LY +YE EGRAK V+ AR +W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
S N K+ Q N GTIK SNLC EIVE++S +ETAVC + SI L YV
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
KN +DFE L + KI+ +NL+K IDV Y I + SN+R RPIG+G+QGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
F L +PF+S A+ LN++IFE IY+ A++AS ELA + GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL 649
W P R DW +L E + K GVRNSL A MPTAST+QI G+ E EP TSN+Y+RR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L++DL G WS A+K +II GSV ++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSVQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKF 769
++D+AADRG ++DQ+QS+N+ + P ++S+ FYAW KG+KT MYY R++ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMSSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TVDTSVL 776
TV L
Sbjct: 753 TVGEECL 759
>gi|448936105|gb|AGE59653.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus TN603.4.2]
Length = 763
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/782 (48%), Positives = 514/782 (65%), Gaps = 45/782 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKE-----------HCDPVLVAQKVCAGVYK 49
M VIKRDG E V FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS 109
+TT QLD+L A+ AA+M NHPDY +LA R+AVSNLHK + NS +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSNSVLDTYTKM-------- 118
Query: 110 GKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQH 169
+S+++D+ +++ + + YDRD+DFDYFGF T++R YL K+D +VVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEHEFQSLVNYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
+RV++ + D +TY +S+ FTHA+PTLFNAG L+SCFL+ + DDS+
Sbjct: 176 TYLRVAIALWGQDITKVKETYDALSKRKFTHASPTLFNAGFKNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
I+ +L A +SK GGIGL + +IR GS I GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+W+ DLFM+RV D WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVETDAAWS 353
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD 409
LF P + GL D++G E+E LY +YE EGRAK V+ AR +W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYETEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
S N K+ Q N GTIK SNLC EIVE++S +ETAVC + SI L Y+
Sbjct: 414 SVNAKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYI-------------- 459
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
KN +DFE L + K++ +NL++ IDV Y I SN+R RPIG+G+QGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKVLAKNLDRSIDVMSYAIPEAMTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
F L +PF+S A+ LN++IFE IY+ A++AS ELA + GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAARNLNREIFEHIYFAAMEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL 649
W P R DW +L E + K GVRNSL A MPTAST+QI G+ E EP TSN+Y+RR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L++DL G WS A+K +II GS+ ++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKF 769
++D+AADRG ++DQ+QS+N+ + P +TS+ FYAW KG+KT MYY R++ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPTMKSMTSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TV 771
TV
Sbjct: 753 TV 754
>gi|448933310|gb|AGE56866.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus NE-JV-3]
Length = 763
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/787 (48%), Positives = 518/787 (65%), Gaps = 45/787 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKE-----------HCDPVLVAQKVCAGVYK 49
M VIKRDG E V FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS 109
+TT QLD+L A+ AA+M NHPDY +LA R+AVSNLHK + S+++ D Y
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQS----SDSVVDTYT------ 116
Query: 110 GKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQH 169
K +S+++D+ +++ + + YDRD+DFDYFGF T+ R YL K+D +VVERPQH
Sbjct: 117 -KMSSMLSDEFMQVVRAHEQEFQALVKYDRDYDFDYFGFSTMRRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
+RV++ + +D +TY +S+ FTHA+PTLFNAG L+SCFL+ + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
I+ +L A +SK GGIGL + +IR GS I GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+W+ DLFM+RV D WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD 409
LF P + GL D++G E+E LY +YE EGRAK V+ AR +W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
S N K+ Q N GTIK SNLC EIVE++S +ETAVC + SI L YV
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
KN +DFE L + KI+ +NL+K IDV Y I + SN+R RPIG+G+QGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
F L +PF+S A+ LN++IFE IY+ A++AS ELA + GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL 649
W P R DW +L E + K GVRNSL A MPTAST+QI G+ E EP TSN+Y+RR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L++DL G WS A+K +II GS+ ++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKF 769
++D+AADRG ++DQ+QS+N+ + P ++S+ FYAW KG+KT MYY R++ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMSSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TVDTSVL 776
TV L
Sbjct: 753 TVGEECL 759
>gi|155371048|ref|YP_001426582.1| hypothetical protein ATCV1_Z101L [Acanthocystis turfacea Chlorella
virus 1]
gi|155124368|gb|ABT16235.1| hypothetical protein ATCV1_Z101L [Acanthocystis turfacea Chlorella
virus 1]
Length = 763
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/787 (48%), Positives = 518/787 (65%), Gaps = 45/787 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKE-----------HCDPVLVAQKVCAGVYK 49
M VIKRDG E V FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS 109
+TT QLD+L A+ AA+M NHPDY +LA R+AVSNLHK + S+++ D Y
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQS----SDSVVDTYT------ 116
Query: 110 GKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQH 169
K +S+++D+ +++ + + YDRD+DFDYFGF T++R YL K+D +VVERPQH
Sbjct: 117 -KMSSMLSDEFMQVVRAHEQEFQALVKYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
+RV++ + +D +TY +S+ FTHA+PTLFNAG L+SCFL+ + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
I+ +L A +SK GGIGL + +IR GS I GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+W+ DLFM+RV D WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD 409
LF P + GL D++G E+E LY +YE EGRAK V+ AR +W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
S N K+ Q N GTI SNLC EIVE++S +ETAVC + SI L YV
Sbjct: 414 SVNVKNMQSNAGTITGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
KN +DFE L + KI+ +NL+K IDV Y I + SN+R RPIG+G+QGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
F L +PF+S A+ LN++IFE IY+ A++AS ELA + GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL 649
W P R DW +L E + K GVRNSL A MPTAST+QI G+ E EP TSN+Y+RR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L++DL G WS A+K +II GS+ ++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKF 769
++D+AADRG ++DQ+QS+N+ + P ++S+ FYAW KG+KT MYY R++ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMSSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TVDTSVL 776
TV L
Sbjct: 753 TVGEECL 759
>gi|371944844|gb|AEX62665.1| ribonucleoside-diphosphate reductase large subunit [Moumouvirus
Monve]
Length = 849
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/796 (46%), Positives = 529/796 (66%), Gaps = 30/796 (3%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G ++P++ + + + + ++ EH + + V + T ++ ++
Sbjct: 49 NGVQQPLQREVVKKYVVSIFQKMNIEHLNVDSLVNNVYPKLKDVNTLLDVENQIIASSTE 108
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
M +H DY A + ++NLH+ T + + + M NK +GK+A +V+ D Y+ ++K
Sbjct: 109 MLTDHYDYPKTAVYILINNLHENTNEDYLKVVTMMRKNINK-NGKRAPIVSKDFYKFVLK 167
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIH--KDDTD 184
+ ++ + Y+RD+D FG++TLERSYL K + +VERPQH+ MRV++ +H +
Sbjct: 168 HNDKINEQLKYERDYDISIFGYRTLERSYLKKCNGMIVERPQHLWMRVAIALHYRTGNLS 227
Query: 185 SALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKS 244
+TY ++S+ +FTHATPTLFNAGTP QLSSCFL+ +KDD + + ++ K CA+ISK
Sbjct: 228 KIFETYEMLSEGYFTHATPTLFNAGTPYEQLSSCFLMGVKDD-MTSLGESWKDCAVISKF 286
Query: 245 AGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPW 304
AGGIG+++ N+R G+YI T G+SNG+ +L ++ND ARY +QGG KR G+FA+++EPW
Sbjct: 287 AGGIGINMSNVRVEGAYISSTQGTSNGL-RVLSIYNDIARYANQGG-KRAGSFAVFIEPW 344
Query: 305 HADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWG 364
H DIF FLDL+KN G E RARDLF L + ++FM+RV D WSL CPS + +G
Sbjct: 345 HGDIFFFLDLKKNTGAETERARDLFLGLMINNIFMDRVEKDENWSLMCPSQCPDIVGKYG 404
Query: 365 IEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIK 424
EF Y +YE EGR I AR LWF+I+ +QIETG PY+LFKD+ N+KSNQ N+G I
Sbjct: 405 EEFNKAYLKYENEGRFIKQIKARDLWFKIMETQIETGVPYILFKDAINQKSNQINIGVIN 464
Query: 425 SSNLCTEIVEFSSPEETAVCNLASIALPRYV-REKGVPVQSNVSKLVGSRDSKNRLFDFE 483
SNLC EIVEFSS +E AVCNL+SI LP+++ E GVP FD+
Sbjct: 465 GSNLCCEIVEFSSADEYAVCNLSSICLPKFIIHENGVPE-----------------FDYN 507
Query: 484 RLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEA 543
+L +V +IIT NLN IIDVN+YP+E TR SNLRHRPIG+G+QGLAD F + +PF+S A
Sbjct: 508 KLYKVARIITRNLNNIIDVNYYPVEKTRVSNLRHRPIGVGVQGLADVFAIFKIPFDSDIA 567
Query: 544 QQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDRWDW 600
+ LNK IFETIY+ + S ++A + GPYET++GSP+SKG Q D+WN++ S WDW
Sbjct: 568 RDLNKKIFETIYFGTMTESLQMAKESGPYETFWGSPLSKGKFQFDLWNLSEDKLSGMWDW 627
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LRE I GVRNSL MPTASTSQI G NEC EP+T NIY+R L+G++ V+NK+L
Sbjct: 628 KTLREQIMIYGVRNSLTTTCMPTASTSQIKGYNECIEPFTENIYSRSTLAGDYYVINKYL 687
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+KDL ELGLW+ + I Y GS++ I IP+ +K IY+TVWEI Q++++DMAADR +
Sbjct: 688 IKDLMELGLWNSDMVDLIKYYQGSIANIPNIPQNIKNIYRTVWEIPQQSIIDMAADRAPF 747
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQ+QS+NI +E+PD KL S FYA+ KG+KTGMYYLR + A+ A +F +D + K
Sbjct: 748 IDQTQSMNIFIEKPDFVKLNSCLFYAYRKGLKTGMYYLRGKPASSANQFGIDIEKI---K 804
Query: 781 ANRADNDVEANLAQVV 796
A N+++ + ++
Sbjct: 805 EIEAKNNIKIRVQNII 820
>gi|448925474|gb|AGE49053.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus Br0604L]
Length = 763
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/787 (47%), Positives = 515/787 (65%), Gaps = 45/787 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKE-----------HCDPVLVAQKVCAGVYK 49
M VIKRDG E V FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS 109
+TT QLD+L A+ AA+M NHPDY +LA R+AVSNLHK + NS +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSNSVLDTYTKM-------- 118
Query: 110 GKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQH 169
+S+++D+ +++ + + YDRD+DFDYFGF T++R YL K+D +VVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEHEFQSLVNYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
+RV++ + D +TY +S+ FTHA+PTLFNAG L+SCFL+ + DDS+
Sbjct: 176 TYLRVAIALWGKDITKVKETYDALSKRKFTHASPTLFNAGFKNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
I+ +L A +SK GGIGL + +IR GS I GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+W+ DLFM+RV D WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVETDAAWS 353
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD 409
LF P + GL+D++G E+E LY +YE EGRAK V+ AR +W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLSDAFGKEYEDLYLRYETEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
S N K+ Q N GTIK SNLC EIVE++S +ETAVC + SI L Y+
Sbjct: 414 SVNAKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYI-------------- 459
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
KN +DFE L + K++ +NL++ IDV Y I SN+ RPIG+G+QGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKVLAKNLDRSIDVMSYAIPEAMTSNMHRRPIGVGVQGLQD 513
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
F L +PF+S A+ LN++IFE IY+ A++AS ELA + GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAARNLNREIFEHIYFAAMEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL 649
W P R DW +L E + K GVRNSL A MPTAST+QI G+ E EP TSN+Y+RR L
Sbjct: 574 WGTEPVTRLDWKTLGERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L++DL G WS A+K +II GS+ ++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKF 769
++D+AADRG ++DQ+QS+N+ + P +TS+ FYAW KG+KT MYY R++ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPTMKSMTSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TVDTSVL 776
TV L
Sbjct: 753 TVGEECL 759
>gi|441432444|ref|YP_007354486.1| ribonucleotide reductase large subunit [Acanthamoeba polyphaga
moumouvirus]
gi|440383524|gb|AGC02050.1| ribonucleotide reductase large subunit [Acanthamoeba polyphaga
moumouvirus]
Length = 849
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/796 (46%), Positives = 528/796 (66%), Gaps = 30/796 (3%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G ++P++ + + + + ++ EH + + V + T ++ ++
Sbjct: 49 NGVQQPLQREVVKKYVVSIFQKMNIEHLNVDSLVNNVYPKLKDVNTLLDVENQIIASSTE 108
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
M +H DY A + ++NLH+ T + + + M NK +GK+A +V+ D Y+ ++K
Sbjct: 109 MLTDHYDYPKTAVYILINNLHENTNEDYLKVVTMMRKNINK-NGKRAPIVSKDFYKFVLK 167
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIH--KDDTD 184
+ ++ + Y+RD+D FG++TLERSYL K + +VERPQH+ MRV++ +H +
Sbjct: 168 HNDKINEQLKYERDYDISIFGYRTLERSYLKKCNGMIVERPQHLWMRVAIALHYRTGNLS 227
Query: 185 SALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKS 244
+TY ++S+ +FTHATPTLFNAGTP QLSSCFL+ +KDD + + ++ K CA+ISK
Sbjct: 228 KIFETYEMLSEGYFTHATPTLFNAGTPYEQLSSCFLMGVKDD-MTSLGESWKDCAVISKF 286
Query: 245 AGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPW 304
AGGIG+++ N+R G+YI T G+SNG+ +L ++ND ARY +QGG KR G+FA+++EPW
Sbjct: 287 AGGIGINMSNVRVEGAYISSTQGTSNGL-RVLSIYNDIARYANQGG-KRAGSFAVFIEPW 344
Query: 305 HADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWG 364
H DIF FLDL+KN G E RARDLF L + ++FM+RV D WSL CPS + +G
Sbjct: 345 HGDIFFFLDLKKNTGAETERARDLFLGLMINNIFMDRVEKDENWSLMCPSQCPDIVGKYG 404
Query: 365 IEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIK 424
EF Y +YE EGR I AR LWF+I+ +QIETG PY+LFKD+ N+KSNQ N+G I
Sbjct: 405 EEFNKAYLKYENEGRFIKQIKARDLWFKIMETQIETGVPYILFKDAINQKSNQINIGVIN 464
Query: 425 SSNLCTEIVEFSSPEETAVCNLASIALPRYV-REKGVPVQSNVSKLVGSRDSKNRLFDFE 483
SNLC EIVEFSS +E AVCNL+SI LP+++ E GVP FD+
Sbjct: 465 GSNLCCEIVEFSSADEYAVCNLSSICLPKFIIHENGVPE-----------------FDYN 507
Query: 484 RLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEA 543
+L +V +IIT NLN IIDVN+YP+E TR SNLRHRPIG+G+QGLAD F + +PF+S A
Sbjct: 508 KLYKVARIITRNLNNIIDVNYYPVEKTRVSNLRHRPIGVGVQGLADVFAIFKIPFDSDIA 567
Query: 544 QQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDRWDW 600
+ LN+ IFETIY+ + S ++A + GPYET++GSP+SKG Q D+WN+ S WDW
Sbjct: 568 RDLNRKIFETIYFGTMTESLQMAKESGPYETFWGSPLSKGKFQFDLWNLGEDKLSGMWDW 627
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+LRE I GVRNSL MPTASTSQI G NEC EP+T NIY+R L+G++ V+NK+L
Sbjct: 628 KTLREQIMIYGVRNSLTTTCMPTASTSQIKGYNECIEPFTENIYSRSTLAGDYYVINKYL 687
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
+KDL ELGLW+ + I Y GS++ I IP+ +K IY+TVWEI Q++++DMAADR +
Sbjct: 688 IKDLMELGLWNSDMVDLIKYYQGSIANIPNIPQNIKNIYRTVWEIPQQSIIDMAADRAPF 747
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQ+QS+NI +E+PD KL S FYA+ KG+KTGMYYLR + A+ A +F +D + K
Sbjct: 748 IDQTQSMNIFIEKPDFVKLNSCLFYAYRKGLKTGMYYLRGKPASSANQFGIDIEKI---K 804
Query: 781 ANRADNDVEANLAQVV 796
A N+++ + ++
Sbjct: 805 EIEAKNNIKIRVQNII 820
>gi|448933990|gb|AGE57544.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus NTS-1]
Length = 763
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/787 (47%), Positives = 518/787 (65%), Gaps = 45/787 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKE-----------HCDPVLVAQKVCAGVYK 49
M VIKRDG E V FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS 109
+TT QLD+L A+ AA+M NHPDY +LA R+AVSNLHK + S+++ D Y
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQS----SDSVVDTYT------ 116
Query: 110 GKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQH 169
K +S+++D+ +++ + + YDRD+DFDYFGF T++R YL K+ ++VERPQH
Sbjct: 117 -KMSSMLSDEFMQVVRAHEQEFQELVKYDRDYDFDYFGFSTMKRLYLTKVGGKIVERPQH 175
Query: 170 MLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
+RV++ + +D +TY +S+ FTHA+PTLFNAG L+SCFL+ + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFKNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
I+ +L A +SK GGIGL + +IR GS I GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+W+ DLFM+RV D WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD 409
LF P + GL D++G E+E LY +YE EGRAK V+ AR +W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYETEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
S N K+ Q N GTIK SNLC EIVE+++ +ETAVC + SI L YV
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTATDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
KN +DFE L + K++ +NL+K IDV Y I R SN+R RPIG+G+QGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKVLAKNLDKSIDVMSYAIPEARTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
F L +PF+S A+ LN++IFE IY+ A++AS ELA + GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAARNLNREIFEHIYFAAVEASCELADEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL 649
W P R DW +L E + K GVRNSL A MPTAST+QI G+ E EP TSN+Y+RR L
Sbjct: 574 WGSEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKT 709
+GEF +VN +L++DL G WS A+K +II GS+ ++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPMVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKF 769
++D+AADRG ++DQ+QS+N+ + P +TS+ FYAW KG+KT MYY R++ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMTSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TVDTSVL 776
TV L
Sbjct: 753 TVGEECL 759
>gi|269860694|ref|XP_002650066.1| ribonucleoside-diphosphate reductase large chain [Enterocytozoon
bieneusi H348]
gi|220066497|gb|EED43976.1| ribonucleoside-diphosphate reductase large chain [Enterocytozoon
bieneusi H348]
Length = 778
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/779 (48%), Positives = 518/779 (66%), Gaps = 36/779 (4%)
Query: 38 LVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSET 97
L KV +G+ +T T++ + +E AA M HP Y LA + + +LH+ T N+FS+
Sbjct: 28 LFFDKVSSGLALDMTPTEMTKYCSEIAATMITIHPSYNKLAAIILIKHLHENTFNTFSD- 86
Query: 98 IKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLL 157
K MY ++ ++ D + E+I+ N + + Y+RD++FDYF +L++SY +
Sbjct: 87 -KMMY------IQQEKNIFDDHIMELIINNMNVYNSIVKYERDYNFDYFALISLQKSYQI 139
Query: 158 KMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSS 217
++++ V+ERPQ + MRV++ +H DD ++ KTY L+SQ ++THATPTL+N+ + QL+S
Sbjct: 140 QVNNTVIERPQDIYMRVAIELHGDDFNNVQKTYDLLSQQYYTHATPTLYNSCFKKNQLAS 199
Query: 218 CFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQ 277
CFLL MK D+I GI+DT+K+ AI SK +GG+GL I N+R S + T G S GI+P+++
Sbjct: 200 CFLLGMKSDTIAGIFDTIKEAAIYSKLSGGVGLHISNLRCDKSQLVTTGGYSKGIIPIVK 259
Query: 278 VFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDL 337
+ ND+ +Y++QGG +R A YLEPWH DI +FLDLRKN G EE RARD F ALW+ DL
Sbjct: 260 LINDSMKYINQGGARRCATCAFYLEPWHKDILKFLDLRKNTGIEEERARDSFTALWINDL 319
Query: 338 FMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQ 397
FMERV + WSLF P+ A GL D WG +F LY+ YEE + I A+KLW EI+ SQ
Sbjct: 320 FMERVEKNEMWSLFDPNIAKGLQDVWGDQFNKLYAYYEETIE-RTTIPAQKLWKEIICSQ 378
Query: 398 IETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVRE 457
IETGTPYM +KD+CNR SNQ N+GTIKSSNLC EI+++S + TAVCNLASI LP+YV+
Sbjct: 379 IETGTPYMCYKDTCNRYSNQNNIGTIKSSNLCAEIIQYSDSDITAVCNLASICLPKYVK- 437
Query: 458 KGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRH 517
+ S S N FDF+ L V KI+T N+NK+ID + +P E +++ N
Sbjct: 438 ----INSTTS---------NYYFDFQELYTVVKIVTYNMNKMIDKSAFPTEESKKGNSLF 484
Query: 518 RPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFG 577
RPIGIG+QGLAD F L+G FES EA+ LNK IFET+Y+ AL+AS ELA K GPY Y G
Sbjct: 485 RPIGIGVQGLADVFFLMGYSFESKEARDLNKMIFETLYFGALEASCELAQKHGPYSYYQG 544
Query: 578 SPMSKGILQVDMW-------NITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQIL 630
S S+GI + + N S W+W LR + GVRNSL +A MPTASTSQI
Sbjct: 545 SMYSQGIFHFEKFCEGRINVNEILSGMWNWEELRIKMKTYGVRNSLTLALMPTASTSQIC 604
Query: 631 GNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISE 690
GN+EC EP SNI+TRR +GEF +VNK+L+KDL +LGLW++ +K II GS+ KI
Sbjct: 605 GNSECIEPIQSNIFTRRTFAGEFQIVNKYLMKDLIKLGLWNNEIKQLIIEYEGSIQKIPI 664
Query: 691 IPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKG 750
IP+ +K +YKTVWE+K K+++DMA DR ++DQSQSLN+ +++P +G L+S+HFY W
Sbjct: 665 IPQHVKDLYKTVWELKMKSVLDMAIDRQAFVDQSQSLNLFVKEPTYGILSSMHFYGWKNK 724
Query: 751 MKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMACG 809
+KTGMYYLRT A AIKFTVD ++ ++ D++ + L K + C C
Sbjct: 725 LKTGMYYLRTCPLAKAIKFTVDKELILKTLSSFKDSENDKKLN------KENDYCEGCS 777
>gi|9632159|ref|NP_048985.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
gi|2447101|gb|AAC96959.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
Length = 771
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/785 (48%), Positives = 526/785 (67%), Gaps = 46/785 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKL------------SYGLSKEHCDPVLVAQKVCAGVY 48
M V+KRDG KE + FDKI R+++L S ++ + D + VCA +
Sbjct: 14 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 73
Query: 49 KGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKR 108
G++T QLDEL A+ +A+MT HPDY +LA R++VSNL K T + ++ ++
Sbjct: 74 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTHDKITDAYAEI------- 126
Query: 109 SGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQ 168
A L+ +D E + K+A + YDRD+DFDYFGFKT+ER YL K+ ++VERPQ
Sbjct: 127 ----AHLLNEDFKENLEKHADEYQAFVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 182
Query: 169 HMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSI 228
H+ +RV++G+ D +TY +S FTHA+PTLFN+G + QL+SCFL+ + +DS+
Sbjct: 183 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 241
Query: 229 EGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQ 288
IY L CA +SK GG+G++I +IR G+ I+GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 242 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 301
Query: 289 GGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKW 348
GG +RKG+FAIYLEP H DI +FL +++NQG+E RAR+LFYA+W+ DLFM+RV D +W
Sbjct: 302 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 360
Query: 349 SLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFK 408
SLF PS+ GL D++G E+ LY++YE EG+AK V+ AR +W ++ + IETG PY+ K
Sbjct: 361 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 420
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D+ N+K+ Q N GTI+ SNLC EI+E++S EETAVC + S+ L YV
Sbjct: 421 DTVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 467
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
KN FDF+ L + KI+ +NL++ IDV YPI+ SN R RPIG+G+QGL
Sbjct: 468 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKRRRPIGVGVQGLQ 520
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D F L LPF+SPEA+ LN++IFE IYY A++AS ELA GP+ T+ GSP SKGILQ
Sbjct: 521 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 580
Query: 589 MWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRV 648
MW++TP DW L E + K GVRNSLL A MPTAST+QI G+ E FEP TSN+Y+RR
Sbjct: 581 MWDVTPKSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 639
Query: 649 LSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+++L E G WS +K +II GS+ K+ I +KA+YKT W++ K
Sbjct: 640 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 699
Query: 709 TLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIK 768
+++DMAADRG ++DQ+QS+N+ + QP +TS+ FY W G+K+ YYLR++ A+ AI
Sbjct: 700 SVIDMAADRGAFVDQTQSMNLFLAQPTLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 759
Query: 769 FTVDT 773
TVDT
Sbjct: 760 VTVDT 764
>gi|9634360|ref|NP_037899.1| ORF139 ribonucleotide reductase large subunit (rr1) [Spodoptera
exigua MNPV]
gi|6960598|gb|AAF33668.1| ORF139 ribonucleotide reductase large subunit (rr1) [Spodoptera
exigua MNPV]
Length = 770
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/788 (48%), Positives = 518/788 (65%), Gaps = 48/788 (6%)
Query: 16 DKITARLKKLSYGLSKEHCD-PVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDY 74
+ +T L L + + D P LV + V G +L A+ AA+MT H DY
Sbjct: 23 ENLTLLLNSLCKNIDTRYVDVPKLVHKVVAESGDIGFDKIKL--YCADVAASMTYVHYDY 80
Query: 75 ALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGA 134
ALLAGR+ V +LH + F D+++ ++++D+ +++ K+ A L+
Sbjct: 81 ALLAGRILVEDLHSKVSSCFVTIANDLFS---------RNVLSDEFNQLVKKHGAILNNE 131
Query: 135 IIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMS 194
I ++RD+++ YFGFKTL YLLK+D ++ERPQHMLMRV++ IH DD S ++TY LMS
Sbjct: 132 IKHERDYNYKYFGFKTLTNGYLLKIDDVIMERPQHMLMRVALAIHGDDVKSVIETYQLMS 191
Query: 195 QHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHN 254
FTHA+PTLF+AGT + Q+ SCFL +KDDS++GIY TL + A+IS GG+GLS
Sbjct: 192 LGTFTHASPTLFSAGTRRQQMCSCFLQSIKDDSVDGIYKTLHESALISNLGGGLGLS--- 248
Query: 255 IRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDL 314
N +G+V ML+VFN+ R+VDQGG KRKGA A Y+EPWH +I+EFL+L
Sbjct: 249 ---------AQNSGGSGLVNMLRVFNNMVRHVDQGG-KRKGALAAYIEPWHPEIYEFLNL 298
Query: 315 RKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQY 374
R+N G E+ +ARDL LW+PDLFM+RV+++ WSLF LAD +G +FE Y Y
Sbjct: 299 RRNMGSEDTKARDLMLGLWIPDLFMKRVKNNQMWSLFSHKTCPDLADKYGFDFEMRYCDY 358
Query: 375 EEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVE 434
E + + AR L+ I+ + +ETG PYML+KD CN SNQ+NLGTIK SNLC EIV+
Sbjct: 359 ENAQVYERQVKARDLFRFIVETNVETGGPYMLYKDHCNNFSNQKNLGTIKCSNLCAEIVQ 418
Query: 435 FSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITE 494
+ ETAVCNLASIA+ + V D + FD+ L +TKII
Sbjct: 419 YCDENETAVCNLASIAVNKCV------------------DVDAKTFDYVLLKHLTKIIVR 460
Query: 495 NLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETI 554
NLNKIIDVNHYP + RSN +HRPIG+GIQGLAD F+LL + ++S +A+ +N I ETI
Sbjct: 461 NLNKIIDVNHYPTAESERSNKKHRPIGVGIQGLADAFVLLDIAYDSDDARFVNYSIAETI 520
Query: 555 YYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN-----ITPSDRWDWSSLREMISK 609
Y+ AL+AS ELA +GPYE+Y SP+S+GIL ++ ++ WDW+ L+ I+K
Sbjct: 521 YFAALEASCELAKINGPYESYTDSPVSRGILHFHNYDDENGVYHSNNLWDWNELQCNINK 580
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGL 669
GVRNSLLVA MPTA+T+QILGNNE FEP+TSN+Y RRVL+GEF VVN++L+K L +L +
Sbjct: 581 YGVRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRRVLAGEFQVVNQYLVKALIDLDI 640
Query: 670 WSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNI 729
++ L+ KI+ ENGSV I EIP+ +K ++KT WEIK K +++MAADR +IDQSQSLN+
Sbjct: 641 YTPELRNKILAENGSVQNIDEIPQHVKNLFKTAWEIKSKCIINMAADRAPFIDQSQSLNL 700
Query: 730 HMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVE 789
+ +P + ++S+HFYAW K +KTGMYYLRT+ AA A KFTVD + + R ND +
Sbjct: 701 FVAEPTYSVVSSIHFYAWEKKLKTGMYYLRTKPAAQATKFTVDVETVASCSKKRKMNDDD 760
Query: 790 ANLAQVVC 797
N+ V C
Sbjct: 761 DNVVCVSC 768
>gi|448933916|gb|AGE57471.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus NE-JV-4]
Length = 766
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/785 (48%), Positives = 526/785 (67%), Gaps = 46/785 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKL------------SYGLSKEHCDPVLVAQKVCAGVY 48
M V+KRDG KE + FDKI R+++L S ++ + D + VCA +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKR 108
G++T QLDEL A+ +A+MT HPDY +LA R++VSNL K T + ++ ++
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTHDKITDAYAEI------- 121
Query: 109 SGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQ 168
A L+ +D E + K+A + YDRD+DFDYFGFKT+ER YL K+ ++VERPQ
Sbjct: 122 ----AHLLNEDFKENLEKHADEYQTLVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSI 228
H+ +RV++G+ D +TY +S FTHA+PTLFN+G + QL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQ 288
IY L CA +SK GG+G++I +IR G+ I+GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKW 348
GG +RKG+FAIYLEP H DI +FL +++NQG+E RAR+LFYA+W+ DLFM+RV D +W
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFK 408
SLF PS+ GL D++G E+ LY++YE EG+AK V+ AR +W ++ + IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D+ N+K+ Q N GTI+ SNLC EI+E++S EETAVC + S+ L YV
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
KN FDF+ L + KI+ +NL++ IDV YPI+ SN R RPIG+G+QGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKRRRPIGVGVQGLQ 515
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D F L LPF+SPEA+ LN++IFE IYY A++AS ELA GP+ T+ GSP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 575
Query: 589 MWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRV 648
+W++TP DW L E + K GVRNSLL A MPTAST+QI G+ E FEP TSN+Y+RR
Sbjct: 576 LWDVTPKSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+++L E G WS +K +II GS+ K+ I +KA+YKT W++ K
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIK 768
+++DMAADRG ++DQ+QS+N+ + QP +TS+ FY W G+K+ YYLR++ A+ AI
Sbjct: 695 SVIDMAADRGAFVDQTQSMNLFLAQPSLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|448931908|gb|AGE55469.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus MA-1E]
Length = 766
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/785 (48%), Positives = 525/785 (66%), Gaps = 46/785 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKL------------SYGLSKEHCDPVLVAQKVCAGVY 48
M V+KRDG KE + FDKI R+++L S ++ + D + VCA +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKR 108
G++T QLDEL A+ +A+MT HPDY +LA R++VSNL K T + ++ ++
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTHDKITDAYAEI------- 121
Query: 109 SGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQ 168
A L+ +D E + K+A + YDRD+DFDYFGFKT+ER YL K+ ++VERPQ
Sbjct: 122 ----AHLLNEDFKENLEKHADEYQALVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSI 228
H+ +RV++G+ D +TY +S FTHA+PTLFN+G + QL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQ 288
IY L CA +SK GG+G++I +IR G+ I+GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKW 348
GG +RKG+FAIYLEP H DI +FL +++NQG+E RAR+LFYA+W+ DLFM+RV D +W
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFK 408
SLF PS+ GL D++G E+ LY++YE EG+AK V+ AR +W ++ + IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D+ N+K+ Q N GTI+ SNLC EI+E++S EETAVC + S+ L YV
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
KN FDF+ L + KI+ +NL++ IDV YPI+ SN R RPIG+G+QGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKRRRPIGVGVQGLQ 515
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D F L LPF+SPEA+ LN++IFE IYY A++AS ELA GP+ T+ GSP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 575
Query: 589 MWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRV 648
+W++TP DW L E + K GVRNSLL A MPTAST+QI G+ E FEP TSN+Y+RR
Sbjct: 576 LWDVTPKSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+++L E G WS +K +II GS+ K+ I +KA+YKT W++ K
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIK 768
+++DMA DRG ++DQ+QS+N+ + QP +TS+ FY W G+K+ YYLR++ A+ AI
Sbjct: 695 SVIDMATDRGAFVDQTQSMNLFLAQPTLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|448825571|ref|YP_007418502.1| ribonucleoside-diphosphate reductase large subunit [Megavirus lba]
gi|444236756|gb|AGD92526.1| ribonucleoside-diphosphate reductase large subunit [Megavirus lba]
Length = 881
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/822 (45%), Positives = 530/822 (64%), Gaps = 39/822 (4%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG P+ I ++ +S + D + V + T + +++
Sbjct: 81 DGNTMPLYRGIIKQYIESISQKMEINDIDIDAIVNNVYPKLKDINTLDDIQNQIIASSSE 140
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
M ++H +Y +A + ++NLH+ T + + + +++N NK +G A +V+D Y+ + K
Sbjct: 141 MMIDHYNYPKIATWILINNLHEHTHDDYFHVVSELHNNINK-NGIHAPIVSDGFYKFVKK 199
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIH--KDDTD 184
N ++ I Y D+ F FGF+TLE+SYL K+ ++ERPQH+ MRV++ IH +D +
Sbjct: 200 NRDEINKHINYQLDYGFSIFGFRTLEQSYLKKVKGIIIERPQHLFMRVAIAIHYRNNDLN 259
Query: 185 SALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKS 244
+TY ++SQ +FTHATPTLFNAGT QLSSCFLL +KDD + I D K CA+ISK
Sbjct: 260 RIFETYEMLSQGYFTHATPTLFNAGTTHEQLSSCFLLGIKDD-MGAIGDCWKDCAMISKY 318
Query: 245 AGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPW 304
AGGIG+++ NIRA GSYI+ T G+++G+ +L VFN+ +RY +QGG KR G+FAIY+EPW
Sbjct: 319 AGGIGVNVSNIRADGSYINSTQGTASGL-RVLTVFNNISRYANQGG-KRAGSFAIYIEPW 376
Query: 305 HADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWG 364
HADI+ FLDL+KN G E RARDLF L + D+F+ERVR+DG WSL CPS+ + +G
Sbjct: 377 HADIYFFLDLKKNTGAETERARDLFLGLMINDIFIERVREDGVWSLMCPSECPNIVGKYG 436
Query: 365 IEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIK 424
EF Y YE+ G+ ISAR LWF+I+ +QIETG PY++FKD+ N KSNQ N+G I
Sbjct: 437 TEFNETYLSYEKSGKYMKQISARDLWFKIMETQIETGVPYIVFKDAVNYKSNQINIGVIN 496
Query: 425 SSNLCTEIVEFSSPEETAVCNLASIALPRYVREK-GVPVQSNVSKLVGSRDSKNRLFDFE 483
SNLC+EIVE+SS +E A CNL+SI LPR++ K GVP FD++
Sbjct: 497 GSNLCSEIVEYSSADEYATCNLSSICLPRFIIHKNGVPE-----------------FDYD 539
Query: 484 RLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEA 543
L +V+ I+T NLN +ID+N YP++ TR SN++HRPIG+G+QG+AD F + PF+S A
Sbjct: 540 MLRKVSGIMTRNLNNVIDINFYPVDKTRVSNIKHRPIGVGVQGVADVFAIFKTPFDSELA 599
Query: 544 QQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDRWDW 600
+ LN+ IFETIY+ L+ S +L+ + G YET+ GSP+SKG Q D+WN++ S WDW
Sbjct: 600 RDLNRKIFETIYFGCLEESMKLSKEFGAYETFIGSPLSKGKFQFDLWNLSSDKLSGMWDW 659
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL I K GVRNSL MPTASTSQI+G NEC EP+T NIY+R L+G++ V+NK+L
Sbjct: 660 DSLMIDIQKYGVRNSLTTTCMPTASTSQIMGYNECIEPFTENIYSRSTLAGDYYVINKYL 719
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
++DL +LGLW+ + I Y GS+SKI IP+ +K IY+TVWEI QK++++MAA+R +
Sbjct: 720 VQDLIDLGLWNSDMIDLIKYYRGSISKIPTIPQHIKDIYRTVWEIPQKSIIEMAAERAPF 779
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS------ 774
IDQ+QS+NI +E P KL S YA G+KTGMYYLR++AA A +F +D
Sbjct: 780 IDQTQSMNIFIESPSFAKLNSCLLYAHKLGLKTGMYYLRSKAATSADQFGIDIDKIKEIE 839
Query: 775 -----VLNNEKANRADNDVEANLAQVVCS-LKNQEECMACGS 810
+L + D +E Q + L+ +C++C S
Sbjct: 840 TRNNIILEKIENIEVDEPIELKPCQYIPKHLRKPGDCISCSS 881
>gi|380863076|gb|AFF18831.1| ribonucleotide reductase large subunit A, partial [Dimocarpus
longan]
Length = 421
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/420 (81%), Positives = 383/420 (91%)
Query: 316 KNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYE 375
KN GKEE RARDLFYALWVPDLFMERV+ +G WSLFCP++A GLAD WG EFE LY+ YE
Sbjct: 1 KNHGKEEHRARDLFYALWVPDLFMERVQSNGVWSLFCPNEAPGLADCWGAEFERLYTHYE 60
Query: 376 EEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEF 435
EG+AK V+ A+ LWFEIL SQIETGTPYMLFKD+CNRKSNQQNLGTIKSSNLCTEI+E+
Sbjct: 61 REGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEY 120
Query: 436 SSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITEN 495
+SP ETAVCNLASIALPRYVREKG+P++S+ SKLVGSR SKNR FDFE+LAEVT I+TEN
Sbjct: 121 TSPTETAVCNLASIALPRYVREKGIPMESHPSKLVGSRGSKNRYFDFEKLAEVTAIVTEN 180
Query: 496 LNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIY 555
LNKIIDVN+YP+E +RSN+RHRPIGIG+QGLADTFILLG+ F+SPEAQQLNKDIFETIY
Sbjct: 181 LNKIIDVNYYPVENAKRSNMRHRPIGIGVQGLADTFILLGMAFDSPEAQQLNKDIFETIY 240
Query: 556 YHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNS 615
YHALKASAE+A K+G YETY GSP+SKGILQ DMW TPS+RWDW +LR+MI+KNGVRNS
Sbjct: 241 YHALKASAEMAAKEGSYETYEGSPVSKGILQPDMWGATPSNRWDWGALRDMITKNGVRNS 300
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALK 675
LLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHLL DLTE+GLWS A+K
Sbjct: 301 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPAVK 360
Query: 676 TKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPD 735
KIIY +GSV KI E+PEELK IYKTVWEIKQKTLVDMA DRGCYIDQSQSLNIHM+QP+
Sbjct: 361 NKIIYNDGSVQKIPEVPEELKGIYKTVWEIKQKTLVDMAVDRGCYIDQSQSLNIHMDQPN 420
>gi|311977696|ref|YP_003986816.1| ribonucleoside-diphosphate reductase large subunit [Acanthamoeba
polyphaga mimivirus]
gi|81990393|sp|Q7T6Y8.2|RIR1_MIMIV RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|55664860|gb|AAQ09572.2| ribonucleotide reductase large subunit [Acanthamoeba polyphaga
mimivirus]
gi|308204750|gb|ADO18551.1| ribonucleoside-diphosphate reductase large subunit [Acanthamoeba
polyphaga mimivirus]
gi|339061249|gb|AEJ34553.1| ribonucleotide reductase large subunit [Acanthamoeba polyphaga
mimivirus]
gi|351737467|gb|AEQ60502.1| ribonucleotide reductase large subunit [Acanthamoeba castellanii
mamavirus]
gi|398257153|gb|EJN40761.1| ribonucleotide reductase large subunit [Acanthamoeba polyphaga
lentillevirus]
Length = 881
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/830 (45%), Positives = 531/830 (63%), Gaps = 47/830 (5%)
Query: 4 IKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAET 63
+ +G + + + I ++K+ + H D + + + + T +D T
Sbjct: 72 LDHNGSIQVITSEIIRTYVEKIFEKMEVTHLDIDKMTKNIFPKLKSINTIKDIDNQIIST 131
Query: 64 AAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNK-RSGKKASLVADDVYE 122
A+ M +H DY +A + ++NLH T + F ET + +YN NK S K A ++++++Y
Sbjct: 132 ASEMVTDHYDYPKIAVWILMTNLHDNTSDDFLETAEKLYN--NKSESNKNAPIISENIYN 189
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIH--K 180
I K+ ++ I YDRD++ FGF+TLE+SYL +++ ++VERPQH+ MRV++ +H K
Sbjct: 190 FIKKHIKEINRVIRYDRDYNLTIFGFRTLEKSYLKRINKKIVERPQHLFMRVAITLHYRK 249
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D +TY +S+ +FTHATPTLFNAGT QLSSCFLL + DS+E I + K+CA+
Sbjct: 250 NDLDRIFETYKYLSKGYFTHATPTLFNAGTTHEQLSSCFLLGI-GDSLEEISECWKECAL 308
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIG+ + NIR G+YI T G + G+ +L +FND +RY +QGG KR G+FAI+
Sbjct: 309 ISKHAGGIGIHMTNIRVEGAYIASTQGEAGGL-RVLTIFNDISRYANQGG-KRPGSFAIF 366
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
+EPWH DIF FLDL+KN G E RARDLF L + D+FMERV D WSL CPS L
Sbjct: 367 IEPWHGDIFFFLDLKKNTGAETERARDLFLGLMINDIFMERVYKDDVWSLMCPSQCPNLL 426
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ +G EF Y +YE EG I A LWF+I+ SQIETG PY++FKD+ N KSNQ N+
Sbjct: 427 NKYGDEFTKEYLKYESEGIYLKQIRAIDLWFKIMESQIETGVPYVMFKDAINDKSNQINI 486
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVRE-KGVPVQSNVSKLVGSRDSKNRL 479
G + SNLC EIVE S +VCNL+SI LPR+V+ VP
Sbjct: 487 GVVNGSNLCCEIVEVSDKNNFSVCNLSSICLPRFVKIIDEVPT----------------- 529
Query: 480 FDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFE 539
F++++L ++++I+T NLN IID+N YP++ TR +NLR RPIGIG+QGLAD F + PF+
Sbjct: 530 FNYQKLFKISRILTRNLNNIIDINFYPLDKTRITNLRDRPIGIGVQGLADVFAMFKTPFD 589
Query: 540 SPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD--- 596
S A+ LN+ IFETIYY AL S +LA + G Y+TY GSP+S+G Q D+WN S
Sbjct: 590 SEIARDLNRKIFETIYYGALTESNKLAREFGTYQTYQGSPISQGKFQFDLWNFDKSQLSG 649
Query: 597 RWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVV 656
WDW LR+ I +GVRNSL+ MPTASTSQI+G NEC EPYT NIY+R ++GE+ V+
Sbjct: 650 MWDWELLRQEILNHGVRNSLVTTCMPTASTSQIMGWNECIEPYTENIYSRSTMAGEYFVI 709
Query: 657 NKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAAD 716
NKHL+KDL ELG+W+ + I Y GSV+ I IP+ +KAIY+TVWEI QK++++MAAD
Sbjct: 710 NKHLIKDLIELGVWNSEMVDLIKYYKGSVANIPNIPDNIKAIYRTVWEIPQKSIIEMAAD 769
Query: 717 RGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
R ++DQ+QS+N+++++P +L S FYAW KG+KTGMYYLR++ A+ A +F +D +
Sbjct: 770 RAPFVDQTQSMNLYIDKPSFARLNSCLFYAWRKGLKTGMYYLRSKPASSANQFGIDIDKI 829
Query: 777 NNEKANRA-------------DNDVEANLAQVVCS-----LKNQEECMAC 808
++ N + ++ +VC L+ EC++C
Sbjct: 830 KEIESKNGIKKQEDTFDLTDLTNTINQQVSGMVCRFVPAHLRKPGECLSC 879
>gi|363540886|ref|YP_004894644.1| mg593 gene product [Megavirus chiliensis]
gi|350612051|gb|AEQ33495.1| ribonucleoside-diphosphate reductase large subunit [Megavirus
chiliensis]
Length = 881
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/822 (45%), Positives = 530/822 (64%), Gaps = 39/822 (4%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG P+ I ++ +S + D + V + T + +++
Sbjct: 81 DGNTMPLYRGIIKQYIESISQKMEINDIDIDAIVNNVYPKLKDINTLDDIQNQIIASSSE 140
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
M ++H +Y +A + ++NLH+ T + + + +++N NK +G A +V+D Y+ + K
Sbjct: 141 MMIDHYNYPKIATWILINNLHEHTHDDYFHVVSELHNNINK-NGIHAPIVSDGFYKFVKK 199
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIH--KDDTD 184
N ++ I Y D+ F FGF+TLE+SYL K+ ++ERPQH+ MRV++ IH +D +
Sbjct: 200 NRDEINKHINYQLDYGFSIFGFRTLEQSYLKKVKGIIIERPQHLFMRVAIAIHYRNNDLN 259
Query: 185 SALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKS 244
+TY ++SQ +FTHATPTLFNAGT QLSSCFLL +KDD + I D K CA+ISK
Sbjct: 260 RIFETYEMLSQGYFTHATPTLFNAGTTHEQLSSCFLLGIKDD-MGAIGDCWKDCAMISKY 318
Query: 245 AGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPW 304
AGGIG+++ NIRA GSYI+ T G+++G+ +L VFN+ +RY +QGG KR G+FAIY+EPW
Sbjct: 319 AGGIGVNVSNIRADGSYINSTQGTASGL-RVLTVFNNISRYANQGG-KRAGSFAIYIEPW 376
Query: 305 HADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWG 364
HADI+ FLDL+KN G E RARDLF L + D+F+ERVR+DG WSL CPS+ + +G
Sbjct: 377 HADIYFFLDLKKNTGAETERARDLFLGLMINDIFIERVREDGVWSLMCPSECPNIVGKYG 436
Query: 365 IEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIK 424
EF Y YE+ G+ ISAR LWF+I+ +QIETG PY++FKD+ N KSNQ N+G I
Sbjct: 437 TEFNETYLSYEKSGKYMKQISARDLWFKIMETQIETGVPYIVFKDAVNYKSNQINVGVIN 496
Query: 425 SSNLCTEIVEFSSPEETAVCNLASIALPRYVREK-GVPVQSNVSKLVGSRDSKNRLFDFE 483
SNLC+EIVE+SS +E A CNL+SI LPR++ K GVP FD++
Sbjct: 497 GSNLCSEIVEYSSADEYATCNLSSICLPRFIIHKNGVPE-----------------FDYD 539
Query: 484 RLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEA 543
L +V+ I+T NLN +ID+N YP++ TR SN++HRPIG+G+QG+AD F + PF+S A
Sbjct: 540 MLRKVSGIMTRNLNNVIDINFYPVDKTRVSNIKHRPIGVGVQGVADVFAIFKTPFDSELA 599
Query: 544 QQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDRWDW 600
+ LN+ IFETIY+ L+ S +L+ + G YET+ GSP+SKG Q D+WN++ S WDW
Sbjct: 600 RDLNRKIFETIYFGCLEESMKLSKEFGAYETFIGSPLSKGKFQFDLWNLSSDKLSGMWDW 659
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL I K GVRNSL MPTASTSQI+G NEC EP+T NIY+R L+G++ V+NK+L
Sbjct: 660 DSLMIDIQKYGVRNSLTTTCMPTASTSQIMGYNECIEPFTENIYSRSTLAGDYYVINKYL 719
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
++DL +LGLW+ + I Y GS+SKI IP+ +K IY+TVWEI QK++++MAA+R +
Sbjct: 720 VQDLIDLGLWNSDMIDLIKYYRGSISKIPTIPQHIKDIYRTVWEIPQKSIIEMAAERAPF 779
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS------ 774
IDQ+QS+NI +E P KL S YA G+KTGMYYLR++AA A +F +D
Sbjct: 780 IDQTQSMNIFIESPSFAKLNSCLLYAHKLGLKTGMYYLRSKAATSADQFGIDIDKIKEIE 839
Query: 775 -----VLNNEKANRADNDVEANLAQVVCS-LKNQEECMACGS 810
+L + D +E Q + L+ +C++C S
Sbjct: 840 TRNNIILEKIENIEVDEPIELKPCQYIPKHLRKPGDCISCSS 881
>gi|371943944|gb|AEX61772.1| ribonucleoside-diphosphate reductase large subunit [Megavirus
courdo7]
Length = 881
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/822 (45%), Positives = 530/822 (64%), Gaps = 39/822 (4%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG P+ I ++ +S + D + V + T + +++
Sbjct: 81 DGNTMPLYRGIIKQYIESISQKMEINDIDIDAIVNNVYPKLKDINTLDDIQNQIIASSSE 140
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
M ++H +Y +A + ++NLH+ T + + + +++N NK +G A +V+D Y+ + K
Sbjct: 141 MMIDHYNYPKIATWILINNLHEHTHDDYFHVVSELHNNINK-NGIHAPIVSDGFYKFVKK 199
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIH--KDDTD 184
N ++ I Y D+ F FGF+TLE+SYL K+ ++ERPQH+ MRV++ IH +D +
Sbjct: 200 NRDEINKHINYQLDYGFSIFGFRTLEQSYLKKVKGIIIERPQHLFMRVAIAIHYRNNDLN 259
Query: 185 SALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKS 244
+TY ++SQ +FTHATPTLFNAGT QLSSCFLL +KDD + I D K CA+ISK
Sbjct: 260 RIFETYEMLSQGYFTHATPTLFNAGTTHEQLSSCFLLGIKDD-MGAIGDCWKDCAMISKY 318
Query: 245 AGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPW 304
AGGIG+++ NIRA GSYI+ T G+++G+ +L VFN+ +RY +QGG KR G+FAIY+EPW
Sbjct: 319 AGGIGVNVSNIRADGSYINSTQGTASGL-RVLTVFNNISRYANQGG-KRAGSFAIYIEPW 376
Query: 305 HADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWG 364
HADI+ FLDL+KN G E RARDLF L + D+F+ERVR+DG WSL CPS+ + +G
Sbjct: 377 HADIYFFLDLKKNTGAETERARDLFLGLMINDIFIERVREDGVWSLMCPSECPNIVGKYG 436
Query: 365 IEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIK 424
EF Y YE+ G+ ISAR LWF+I+ +QIETG PY++FKD+ N KSNQ N+G I
Sbjct: 437 TEFNEAYLSYEKSGKYMKQISARDLWFKIMETQIETGVPYIVFKDAVNYKSNQINIGVIN 496
Query: 425 SSNLCTEIVEFSSPEETAVCNLASIALPRYVREK-GVPVQSNVSKLVGSRDSKNRLFDFE 483
SNLC+EIVE+SS +E A CNL+SI LPR++ K GVP FD++
Sbjct: 497 GSNLCSEIVEYSSADEYATCNLSSICLPRFIIHKNGVPE-----------------FDYD 539
Query: 484 RLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEA 543
L +V+ I+T NLN +ID+N YP++ TR SN++HRPIG+G+QG+AD F + PF+S A
Sbjct: 540 MLRKVSGIMTRNLNNVIDINFYPVDKTRVSNIKHRPIGVGVQGVADVFAIFKTPFDSKLA 599
Query: 544 QQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDRWDW 600
+ LN+ IFETIY+ L+ S +L+ + G YET+ GSP+SKG Q D+WN++ S WDW
Sbjct: 600 RDLNRKIFETIYFGCLEESMKLSKEFGAYETFIGSPLSKGKFQFDLWNLSSDKLSGMWDW 659
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL I K GVRNSL MPTASTSQI+G NEC EP+T NIY+R L+G++ V+NK+L
Sbjct: 660 DSLMIDIQKYGVRNSLTTTCMPTASTSQIMGYNECIEPFTENIYSRSTLAGDYYVINKYL 719
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
++DL +LGLW+ + I Y GS+SKI IP+ +K IY+TVWEI QK++++MAA+R +
Sbjct: 720 VQDLIDLGLWNSDMIDLIKYYRGSISKIPTIPQHIKDIYRTVWEIPQKSIIEMAAERAPF 779
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS------ 774
IDQ+QS+NI +E P KL S YA G+KTGMYYLR++AA A +F +D
Sbjct: 780 IDQTQSMNIFIESPSFAKLNSCLLYAHKLGLKTGMYYLRSKAATSADQFGIDIDKIKEIE 839
Query: 775 -----VLNNEKANRADNDVEANLAQVVCS-LKNQEECMACGS 810
+L + D +E Q + L+ +C++C S
Sbjct: 840 TRNNIILEKIENIEVDEPIELKPCQYIPKHLRKPGDCISCSS 881
>gi|425701505|gb|AFX92667.1| ribonucleoside-diphosphate reductase large subunit [Megavirus
courdo11]
Length = 881
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/822 (45%), Positives = 530/822 (64%), Gaps = 39/822 (4%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG P+ I ++ +S + D + V + T + +++
Sbjct: 81 DGNTMPLYRGIIKQYIESISQKMEINDIDIDAIVNNVYPKLKDINTLDDIQNQIIASSSE 140
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
M ++H +Y +A + ++NLH+ T + + + +++N NK +G A +V+D Y+ + K
Sbjct: 141 MMIDHYNYPKIATWILINNLHEHTHDDYFHVVSELHNNINK-NGIHAPIVSDGFYKFVKK 199
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIH--KDDTD 184
N ++ I Y D+ F FGF+TLE+SYL K+ ++ERPQH+ MRV++ IH +D +
Sbjct: 200 NRDEINKHINYQLDYGFSIFGFRTLEQSYLKKVKGIIIERPQHLFMRVAIAIHYRNNDLN 259
Query: 185 SALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKS 244
+TY ++SQ +FTHATPTLFNAGT QLSSCFLL +KDD + I D K CA+ISK
Sbjct: 260 RIFETYEMLSQGYFTHATPTLFNAGTTHEQLSSCFLLGIKDD-MGAIGDCWKDCAMISKY 318
Query: 245 AGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPW 304
AGGIG+++ NIRA GSYI+ T G+++G+ +L VFN+ +RY +QGG KR G+FAIY+EPW
Sbjct: 319 AGGIGVNVSNIRADGSYINSTQGTASGL-RVLTVFNNISRYANQGG-KRAGSFAIYIEPW 376
Query: 305 HADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWG 364
HADI+ FLDL+KN G E RARDLF L + D+F+ERVR+DG WSL CPS+ + +G
Sbjct: 377 HADIYFFLDLKKNTGAETERARDLFLGLMINDIFIERVREDGVWSLMCPSECPNIVGKYG 436
Query: 365 IEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIK 424
EF Y YE+ G+ ISAR LWF+I+ +QIETG PY++FKD+ N KSNQ N+G I
Sbjct: 437 TEFNEAYLSYEKSGKYMKQISARDLWFKIMETQIETGVPYIVFKDAVNYKSNQINIGVIN 496
Query: 425 SSNLCTEIVEFSSPEETAVCNLASIALPRYVREK-GVPVQSNVSKLVGSRDSKNRLFDFE 483
SNLC+EIVE+SS +E A CNL+SI LPR++ K GVP FD++
Sbjct: 497 GSNLCSEIVEYSSADEYATCNLSSICLPRFIIHKNGVPE-----------------FDYD 539
Query: 484 RLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEA 543
L +V+ I+T NLN +ID+N YP++ TR SN++HRPIG+G+QG+AD F + PF+S A
Sbjct: 540 MLRKVSGIMTRNLNNVIDINFYPVDKTRISNIKHRPIGVGVQGVADVFAIFKTPFDSELA 599
Query: 544 QQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDRWDW 600
+ LN+ IFETIY+ L+ S +L+ + G YET+ GSP+SKG Q D+WN++ S WDW
Sbjct: 600 RDLNRKIFETIYFGCLEESMKLSKEFGAYETFIGSPLSKGKFQFDLWNLSSDKLSGMWDW 659
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
SL I K GVRNSL MPTASTSQI+G NEC EP+T NIY+R L+G++ V+NK+L
Sbjct: 660 DSLMIDIQKYGVRNSLTTTCMPTASTSQIMGYNECIEPFTENIYSRSTLAGDYYVINKYL 719
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
++DL +LGLW+ + I Y GS+SKI IP+ +K IY+TVWEI QK++++MAA+R +
Sbjct: 720 VQDLIDLGLWNSDMIDLIKYYRGSISKIPTIPQHIKDIYRTVWEIPQKSIIEMAAERAPF 779
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS------ 774
IDQ+QS+NI +E P KL S YA G+KTGMYYLR++AA A +F +D
Sbjct: 780 IDQTQSMNIFIESPSFAKLNSCLLYAHKLGLKTGMYYLRSKAATSADQFGIDIDKIKEIE 839
Query: 775 -----VLNNEKANRADNDVEANLAQVVCS-LKNQEECMACGS 810
+L + D +E Q + L+ +C++C S
Sbjct: 840 TRNNIILEKIENIEVDEPIELKPCQYIPKHLRKPGDCISCSS 881
>gi|448925052|gb|AGE48633.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus AN69C]
gi|448930475|gb|AGE54040.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus IL-3A]
Length = 766
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/785 (48%), Positives = 525/785 (66%), Gaps = 46/785 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKL------------SYGLSKEHCDPVLVAQKVCAGVY 48
M V+KRDG KE + FDKI R+++L S ++ + D + VCA +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKR 108
G++T QLDEL A+ +A+MT HPDY +LA R++VSNL K T + ++ ++
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTHDKITDAYAEI------- 121
Query: 109 SGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQ 168
A L+ +D E + K+A + YDRD+DFDYFGFKT+ER YL K+ ++VERPQ
Sbjct: 122 ----AHLLNEDFKENLEKHADEYQTLVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSI 228
H+ +RV++G+ D +TY +S FTHA+PTLFN+G + QL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQ 288
IY L CA +SK GG+G++I +IR G+ I+GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKW 348
GG +RKG+FAIYLEP H DI +FL +++NQG+E RAR+LFYA+W+ DLFM+RV D +W
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFK 408
SLF PS+ GL D++G E+ LY++YE EG+AK V+ AR +W ++ + IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D+ N+K+ Q N GTI+ SNLC EI+E++S EETAVC + S+ L YV
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
KN FDF+ L + KI+ +NL++ IDV YPI+ SN RPIG+G+QGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQGLQ 515
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D F L LPF+SPEA+ LN++IFE IYY A++AS ELA GP+ T+ GSP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 575
Query: 589 MWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRV 648
+W++TP DW L E + K GVRNSLL A MPTAST+QI G+ E FEP TSN+Y+RR
Sbjct: 576 LWDVTPQSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+++L E G WS +K +II GS+ K+ I +KA+YKT W++ K
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIK 768
+++DMAADRG ++DQ+QS+N+ + QP +TS+ FY W G+K+ YYLR++ A+ AI
Sbjct: 695 SVIDMAADRGAFVDQTQSMNLFLAQPSLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|448931166|gb|AGE54729.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus KS1B]
Length = 766
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/785 (48%), Positives = 525/785 (66%), Gaps = 46/785 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKL------------SYGLSKEHCDPVLVAQKVCAGVY 48
M V+KRDG KE + FDKI R+++L S ++ + D + VCA +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKR 108
G++T QLDEL A+ +A+MT HPDY +LA R++VSNL K T + ++ ++
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTHDKITDAYAEI------- 121
Query: 109 SGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQ 168
A L+ +D E + K+A + YDRD+DFDYFGFKT+ER YL K+ ++VERPQ
Sbjct: 122 ----AHLLNEDFKENLEKHADEYQTLVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSI 228
H+ +RV++G+ D +TY +S FTHA+PTLFN+G + QL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQ 288
IY L CA +SK GG+G++I +IR G+ I+GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKW 348
GG +RKG+FAIYLEP H DI +FL +++NQG+E RAR+LFYA+W+ DLFM+RV D +W
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFK 408
SLF PS+ GL D++G E+ LY++YE EG+AK V+ AR +W ++ + IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D+ N+K+ Q N GTI+ SNLC EI+E++S EETAVC + S+ L YV
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
KN FDF+ L + KI+ +NL++ IDV YPI+ SN RPIG+G+QGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQGLQ 515
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D F L LPF+SPEA+ LN++IFE IYY A++AS ELA GP+ T+ GSP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHATFEGSPASKGILQYH 575
Query: 589 MWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRV 648
+W++TP DW L E + K GVRNSLL A MPTAST+QI G+ E FEP TSN+Y+RR
Sbjct: 576 LWDVTPQSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+++L E G WS +K +II GS+ K+ I +KA+YKT W++ K
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIK 768
+++DMAADRG ++DQ+QS+N+ + QP +TS+ FY W G+K+ YYLR++ A+ AI
Sbjct: 695 SVIDMAADRGAFVDQTQSMNLFLAQPSLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|157953938|ref|YP_001498829.1| hypothetical protein AR158_C748R [Paramecium bursaria Chlorella
virus AR158]
gi|156068586|gb|ABU44293.1| hypothetical protein AR158_C748R [Paramecium bursaria Chlorella
virus AR158]
gi|448931537|gb|AGE55099.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus MA-1D]
gi|448934986|gb|AGE58538.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus NY-2B]
Length = 767
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/788 (48%), Positives = 525/788 (66%), Gaps = 46/788 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKL------------SYGLSKEHCDPVLVAQKVCAGVY 48
M V+KRDG KE + FDKI R+++L S ++ D + VCA +
Sbjct: 10 MVVLKRDGSKENISFDKILQRIQRLCWPIDSKPVYKGSRAMTGLSVDVSKIVASVCASIV 69
Query: 49 KGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKR 108
G++T QLDEL A+ +A+MT HPDY +LA R++VSNL K T + ++ ++
Sbjct: 70 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTHDKITDAYAEI------- 122
Query: 109 SGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQ 168
A L++DD E I K+A I YDRD+DFDYFGFKT+ER YL K+++++VERPQ
Sbjct: 123 ----AHLLSDDFKENIEKHADEYQSFIDYDRDYDFDYFGFKTMERLYLTKVNNKIVERPQ 178
Query: 169 HMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSI 228
H+ +RV++G+ D +TY +S FTHA+PTLFNAG + QL+SCFL+ + +DS+
Sbjct: 179 HVYLRVAIGLWGSDIARVKETYDALSCRKFTHASPTLFNAGFKKAQLASCFLVTV-EDSL 237
Query: 229 EGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQ 288
IY L CA +SK GG+G++I IR GS I+GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 238 GDIYKVLGDCAQLSKHGGGLGINISEIRGRGSRINGTNGESDGIVPMLKVFDTTSAYANQ 297
Query: 289 GGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKW 348
GG +RKG+FAIYLEP H D+ +FL +++NQG+E RAR+LFYA+W+ DLFM+RV D +W
Sbjct: 298 GG-RRKGSFAIYLEPHHPDVMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 356
Query: 349 SLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFK 408
SLF PS+ GL D++G E+ LY +YE EG+AK V+ AR +W ++ + IETG PY+ K
Sbjct: 357 SLFDPSECPGLTDAFGDEYAELYERYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVSNK 416
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D+ N+K+ Q N GTI+ SNLC EIVE++S EETAVC + S+ L YV
Sbjct: 417 DAVNKKNMQMNAGTIRGSNLCNEIVEYTSKEETAVCVIGSVVLKNYV------------- 463
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
KN FDF+ L + KI+ +NL++ IDV YPI+ SN RPIG+G+QGL
Sbjct: 464 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQGLQ 516
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D F L LPF+S EA+ LN++IFE IYY A++AS ELA GPY T+ GSP SKGILQ
Sbjct: 517 DVFFKLKLPFDSSEARDLNREIFEHIYYAAVEASIELAEIHGPYPTFEGSPASKGILQYH 576
Query: 589 MWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRV 648
+W++TP DW L E + K GVRNSL+ A MPTAST+QI G+ E FEP TSN+Y+RR
Sbjct: 577 LWDVTPKSNLDWRGLEERV-KKGVRNSLVTALMPTASTAQICGSIEAFEPITSNLYSRRT 635
Query: 649 LSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+++L E G WS ++K +II GS+ K+ I +KA+YKT W++ K
Sbjct: 636 LAGEFPVVNSYLVRELIERGTWSESMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 695
Query: 709 TLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIK 768
+++DMAADRG ++DQ+QS+N+ + QP +TS+ FY W G+KT YYLR++ ++ AI
Sbjct: 696 SVIDMAADRGPFVDQTQSMNLFLAQPTLKNVTSMLFYGWKSGLKTLQYYLRSKPSSSAIA 755
Query: 769 FTVDTSVL 776
T+D L
Sbjct: 756 VTIDNDCL 763
>gi|448929110|gb|AGE52679.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CvsA1]
Length = 766
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/785 (48%), Positives = 524/785 (66%), Gaps = 46/785 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKL------------SYGLSKEHCDPVLVAQKVCAGVY 48
M V+KRDG KE + FDKI R+++L S ++ + D + VCA +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKR 108
G++T QLDEL A+ +A+MT HPDY +LA R++VSNL K T + ++ +
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTHDKITDAYAGI------- 121
Query: 109 SGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQ 168
A L+ +D E + K+A + YDRD+DFDYFGFKT+ER YL K+ ++VERPQ
Sbjct: 122 ----AHLLNEDFKENLEKHADEYQALVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSI 228
H+ +RV++G+ D +TY +S FTHA+PTLFN+G + QL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQ 288
IY L CA +SK GG+G++I +IR G+ I+GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKW 348
GG +RKG+FAIYLEP H DI +FL +++NQG+E RAR+LFYA+W+ DLFM+RV D +W
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFK 408
SLF PS+ GL D++G E+ LY++YE EG+AK V+ AR +W ++ + IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D+ N+K+ Q N GTI+ SNLC EI+E++S EETAVC + S+ L YV
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
KN FDF+ L + KI+ +NL++ IDV YPI+ SN RPIG+G+QGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKMRRPIGVGVQGLQ 515
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D F L LPF+SPEA+ LN++IFE IYY A++AS ELA GP+ T+ GSP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 575
Query: 589 MWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRV 648
+W++TP DW L E + K GVRNSLL A MPTAST+QI G+ E FEP TSN+Y+RR
Sbjct: 576 LWDVTPKSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+++L E G WS +K +II GS+ K+ I +KA+YKT W++ K
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIK 768
+++DMAADRG ++DQ+QS+N+ + QP +TS+ FY W G+K+ YYLR++ A+ AI
Sbjct: 695 SVIDMAADRGAFVDQTQSMNLFLAQPTLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|401665770|gb|AFP95882.1| ribonucleotide reductase large subunit [Mamestra brassicae MNPV]
Length = 676
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/693 (50%), Positives = 492/693 (70%), Gaps = 33/693 (4%)
Query: 86 LHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDY 145
+HK SF++ ++ ++ K +LV+D++ + +K++ ++ I D D++Y
Sbjct: 1 MHKYVDESFTKVVQRLH---------KHNLVSDELLSVTIKHSKIIEENIDMKLDLDYNY 51
Query: 146 FGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTL 205
FG++TL+ YL+K++ +V ER QHM MR+++GI DD DSA+K+Y +S+ +THA+PT+
Sbjct: 52 FGYQTLKNGYLIKINEKVAERIQHMHMRIALGIFGDDIDSAIKSYKFLSRKMYTHASPTM 111
Query: 206 FNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGT 265
F AGT PQ+SSCFLL M+ DSI GIY+TL CA+ISK GGIGL+++++R S I T
Sbjct: 112 FAAGTLTPQMSSCFLLTMESDSIRGIYNTLNDCAMISKHGGGIGLNVNSVRGRNSKIKST 171
Query: 266 NGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRA 325
NG+++G++PML+VFN+ R+VDQGG KRKGA A+Y+EPWH DI + L +R+N G E+ +A
Sbjct: 172 NGTASGLLPMLRVFNNMVRHVDQGG-KRKGAQAVYVEPWHCDIMDVLHMRRNIGSEDTKA 230
Query: 326 RDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVIS 385
RDL ALWVPD+FM+RV ++G WSL CP++ L D++G +FE+ Y YE++G+ + +
Sbjct: 231 RDLMNALWVPDIFMKRVEENGIWSLMCPNECPKLNDTYGDDFEYWYKHYEDKGQFREQMP 290
Query: 386 ARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCN 445
A L I+ Q ETGTPYML+KD+CNRKSNQ N G IK SNLC EIV++ +P+ETAVCN
Sbjct: 291 AVTLMRNIIEIQAETGTPYMLYKDACNRKSNQSNCGLIKCSNLCAEIVQYCAPDETAVCN 350
Query: 446 LASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHY 505
LASIA+ +Y+ N FDF+ L V K + +LNKIID N Y
Sbjct: 351 LASIAVNKYI--------------------NNDTFDFQLLHTVVKHVVNSLNKIIDRNFY 390
Query: 506 PIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAEL 565
PIET ++SN+RHRPIGIGIQGLAD F++L +P+ S A LNK I ET+Y+ AL+AS EL
Sbjct: 391 PIETAKKSNMRHRPIGIGIQGLADAFVMLRIPYVSDAAVLLNKQIAETVYHAALEASYEL 450
Query: 566 AVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTAS 625
A PY T+ GS S+GILQ D+WN P+ WDWS L+ I K G+RNSLLVA MPTA+
Sbjct: 451 ASVSEPYSTFAGSKASEGILQYDLWNTVPTSLWDWSQLKINIQKYGLRNSLLVAYMPTAT 510
Query: 626 TSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSV 685
T+QIL NNE FEP+ SN++ RRVLSGEF VVN++L+ DL +L L++++++ I+ GS+
Sbjct: 511 TAQILNNNESFEPFHSNLFLRRVLSGEFQVVNRYLVDDLIKLNLYTNSMRKTIMANRGSI 570
Query: 686 SKISEIPEELKAIYKTVWEIKQ---KTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSL 742
+ I++IP+ LK +Y T+WEI + K +++MAADRG +IDQSQS N++M P K+ S+
Sbjct: 571 ASIAKIPDNLKKLYMTIWEIWENNGKYMIEMAADRGAFIDQSQSFNVYMANPTLSKMASV 630
Query: 743 HFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
H Y W +G+KTGMYYLRT AA++ +FTV ++
Sbjct: 631 HMYGWKRGLKTGMYYLRTLPAANSQQFTVSPNL 663
>gi|448928094|gb|AGE51666.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CviKI]
Length = 766
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/785 (47%), Positives = 525/785 (66%), Gaps = 46/785 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKL------------SYGLSKEHCDPVLVAQKVCAGVY 48
M V+KRDG KE + FDKI R+++L S ++ + D + VCA +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKR 108
G++T QLDEL A+ +A+MT HPDY +LA R++VSNL K T + ++ ++
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTHDKITDAYAEI------- 121
Query: 109 SGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQ 168
A L+ +D E + K+A + YDRD+DFDYFGFKT+ER YL K+ ++VERPQ
Sbjct: 122 ----AHLLNEDFKENLEKHADEYQALVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSI 228
H+ +RV++G+ D +TY +S FTHA+PTLFN+G + QL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQ 288
IY L CA +SK GG+G++I +IR G+ I+GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKW 348
GG +RKG+FAIYLEP H DI +FL +++NQG+E RAR+LFYA+W+ DLFM+RV D +W
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFK 408
SLF PS+ GL D++G E+ LY++YE EG+AK V+ AR +W ++ + IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D+ N+K+ Q N GTI+ SNLC EI+E++S EETAVC + S+ L YV
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
KN FDF+ L + KI+ +NL++ IDV YPI+ SN RPIG+G+QGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQGLQ 515
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D F L LPF+SPEA+ LN++IFE IYY A++AS ELA GP+ T+ GSP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 575
Query: 589 MWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRV 648
+W++TP DW L + + K GVRNSLL A MPTAST+QI G+ E FEP TSN+Y+RR
Sbjct: 576 LWDVTPKSNLDWRGLEKRV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+++L E G WS +K +II GS+ K+ I +KA+YKT W++ K
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIK 768
+++DMAADRG ++DQ+QS+N+ + QP +TS+ FY W G+K+ YYLR++ A+ AI
Sbjct: 695 SVIDMAADRGAFVDQTQSMNLFLAQPSLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|448930855|gb|AGE54419.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus IL-5-2s1]
Length = 767
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/788 (47%), Positives = 523/788 (66%), Gaps = 46/788 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKL------------SYGLSKEHCDPVLVAQKVCAGVY 48
M V+KRDG KE + FDKI R+++L S ++ D + VCA +
Sbjct: 10 MVVLKRDGSKENISFDKILQRIQRLCWPIDSKPVYKGSRAMTGLSVDVSKIVASVCASIV 69
Query: 49 KGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKR 108
G++T QLDEL A+ +A+MT HPDY +LA R++VSNL K T + ++ ++
Sbjct: 70 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTHDKITDAYAEI------- 122
Query: 109 SGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQ 168
A L++DD E I K+A I YDRD+DFDYFGFKT+ER YL K+++++VERPQ
Sbjct: 123 ----AHLLSDDFKENIEKHADEYQSFIDYDRDYDFDYFGFKTMERLYLTKVNNKIVERPQ 178
Query: 169 HMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSI 228
H+ +RV++G+ D +TY +S FTHA+PTLFNAG + QL+SCFL+ + +DS+
Sbjct: 179 HVYLRVAIGLWGSDIARVKETYDALSCRKFTHASPTLFNAGFKKAQLASCFLVTV-EDSL 237
Query: 229 EGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQ 288
IY L CA +SK GG+G++I IR GS I+GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 238 GDIYKVLGDCAQLSKHGGGLGINISEIRGRGSRINGTNGESDGIVPMLKVFDTTSAYANQ 297
Query: 289 GGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKW 348
GG +RKG+FAIYLEP H D+ +FL +++NQG+E RAR+LFYA+W+ DLFM+RV D +W
Sbjct: 298 GG-RRKGSFAIYLEPHHPDVMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 356
Query: 349 SLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFK 408
SLF PS+ GL D++G E+ LY +YE EG+AK V+ AR +W ++ + IETG PY+ K
Sbjct: 357 SLFDPSECPGLTDAFGDEYAELYERYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVSNK 416
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D+ N+K+ Q N GTI+ SNLC EIVE++S EETAVC + S+ L YV
Sbjct: 417 DAVNKKNMQMNAGTIRGSNLCNEIVEYTSKEETAVCVIGSVVLKNYV------------- 463
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
KN FDF+ L + KI+ +NL++ IDV YPI+ SN RPIG+G+QGL
Sbjct: 464 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQGLQ 516
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D F L LPF+S EA+ LN++IFE IYY A++AS ELA GPY T+ GSP SKGILQ
Sbjct: 517 DVFFKLKLPFDSSEARDLNREIFEHIYYAAVEASIELAEIHGPYPTFEGSPASKGILQYH 576
Query: 589 MWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRV 648
+W++TP DW L E + K GVRNSL+ A MPTAST+QI G+ E FEP TSN+Y+RR
Sbjct: 577 LWDVTPKSNLDWRGLEERV-KKGVRNSLVTALMPTASTAQICGSIEAFEPITSNLYSRRT 635
Query: 649 LSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+++L E G WS ++K +II GS+ K+ I +KA+YKT W++ K
Sbjct: 636 LAGEFPVVNSYLVRELIERGTWSESMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 695
Query: 709 TLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIK 768
+++DMA DRG ++DQ+QS+N+ + P +TS+ FY W G+KT YYLR++ ++ AI
Sbjct: 696 SVIDMATDRGAFVDQTQSMNLFLAAPSLKNVTSMLFYGWKSGLKTLQYYLRSKPSSSAIA 755
Query: 769 FTVDTSVL 776
T+D L
Sbjct: 756 VTIDNDCL 763
>gi|448935365|gb|AGE58916.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus NYs1]
Length = 767
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/788 (48%), Positives = 524/788 (66%), Gaps = 46/788 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKL------------SYGLSKEHCDPVLVAQKVCAGVY 48
M V+KRDG KE + FDKI R+++L S ++ D + VCA +
Sbjct: 10 MVVLKRDGSKENISFDKILQRIQRLCWPIDSKPVYKGSRAMTGLSVDVSKIVASVCASIV 69
Query: 49 KGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKR 108
G++T QLDEL A+ +A+MT HPDY +LA R++VSNL K T + ++ ++
Sbjct: 70 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTHDKITDAYAEI------- 122
Query: 109 SGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQ 168
A L++DD E I K+A I YDRD+DFDYFGFKT+ER YL K+++++VERPQ
Sbjct: 123 ----AHLLSDDFKENIEKHADEYQSFIDYDRDYDFDYFGFKTMERLYLTKVNNKIVERPQ 178
Query: 169 HMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSI 228
H+ +RV++G+ D +TY +S FTHA+PTLFNAG + QL+SCFL+ + +DS+
Sbjct: 179 HVYLRVAIGLWGSDIARVKETYDALSCRKFTHASPTLFNAGFKKAQLASCFLVTV-EDSL 237
Query: 229 EGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQ 288
IY L CA +SK GG+G++I IR GS I+GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 238 GDIYKVLGDCAQLSKHGGGLGINISEIRGRGSRINGTNGESDGIVPMLKVFDTTSAYANQ 297
Query: 289 GGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKW 348
GG +RKG+FAIYLEP H D+ +FL +++NQG+E RAR+LFYA+W+ DLFM+RV D +W
Sbjct: 298 GG-RRKGSFAIYLEPHHPDVMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 356
Query: 349 SLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFK 408
SLF PS+ GL D++G E+ LY +YE EG+AK V+ AR +W ++ + IETG PY+ K
Sbjct: 357 SLFDPSECPGLTDAFGDEYAELYERYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVSNK 416
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D+ N+K+ Q N GTI+ SNLC EIVE++S EETAVC + S+ L YV
Sbjct: 417 DAVNKKNMQMNAGTIRGSNLCNEIVEYTSKEETAVCVIGSVVLKNYV------------- 463
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
KN FDF+ L + KI+ +NL++ IDV YPI+ SN RPIG+G+QGL
Sbjct: 464 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQGLQ 516
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D F L LPF+S EA+ LN++IFE IYY A++AS ELA PY T+ GSP SKGILQ
Sbjct: 517 DVFFKLKLPFDSSEARDLNREIFEHIYYAAVEASIELAEIHDPYPTFEGSPASKGILQYH 576
Query: 589 MWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRV 648
+W++TP DW L E + K GVRNSL+ A MPTAST+QI G+ E FEP TSN+Y+RR
Sbjct: 577 LWDVTPKSNLDWRGLEERV-KKGVRNSLVTALMPTASTAQICGSIEAFEPITSNLYSRRT 635
Query: 649 LSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+++L E G WS ++K +II GS+ K+ I +KA+YKT W++ K
Sbjct: 636 LAGEFPVVNSYLVRELIERGTWSESMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 695
Query: 709 TLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIK 768
+++DMAADRG ++DQ+QS+N+ + QP +TS+ FY W G+KT YYLR++ ++ AI
Sbjct: 696 SVIDMAADRGPFVDQTQSMNLFLAQPTLKNVTSMLFYGWKSGLKTLQYYLRSKPSSSAIA 755
Query: 769 FTVDTSVL 776
T+D L
Sbjct: 756 VTIDNDCL 763
>gi|451927339|gb|AGF85217.1| reductase large subunit [Moumouvirus goulette]
Length = 847
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/819 (44%), Positives = 531/819 (64%), Gaps = 37/819 (4%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G K+P+ + + + + + EH + + + V + + ++ ++
Sbjct: 47 NGVKQPLYKEVVRKYIISVFQKMKIEHLNVDPLIENVYPKLKDINSLLDIENQIIASSTE 106
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMK 126
M +H DY A + ++NLH+ T + + + M N+ +G A +V+ + Y+ + K
Sbjct: 107 MLADHYDYPKTAVYILINNLHENTHEDYFKVVSIMRRNINE-NGIHAPIVSKNFYKFVQK 165
Query: 127 NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIH--KDDTD 184
N ++ Y+RD+D FG++TLERSYL K + ++ERPQH+ MRV++ +H D
Sbjct: 166 NYKKINEQFKYERDYDMSIFGYRTLERSYLKKCNGVIIERPQHLWMRVAITLHYRTGDLS 225
Query: 185 SALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKS 244
+TY ++S+ +FTHATPTLFN+GTP QLSSCFL+ +KDD + + D+ K CAIISK
Sbjct: 226 KIFETYEMLSEGYFTHATPTLFNSGTPFEQLSSCFLMGVKDD-MASLGDSWKDCAIISKF 284
Query: 245 AGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPW 304
+GGIG+++ N+R G+YI+ T G+SNG+ +L ++ND ARY +QGG KR G+FAI++EPW
Sbjct: 285 SGGIGINMSNVRVEGAYINSTQGTSNGL-RVLSIYNDIARYANQGG-KRAGSFAIFIEPW 342
Query: 305 HADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWG 364
H DIF FLDL+KN G E R RDLF L + ++FM+RV D KWSL CPS + +G
Sbjct: 343 HGDIFFFLDLKKNTGAETERTRDLFLGLMINNIFMDRVEKDEKWSLMCPSQCPDIVGKYG 402
Query: 365 IEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIK 424
EF Y +YE EG+ I AR+LWF+I+ +QIETG PY+L+KD+ N KSNQ N+G I
Sbjct: 403 EEFNKAYLKYETEGKFTKQIKARELWFKIMETQIETGVPYILYKDAINEKSNQINIGVIN 462
Query: 425 SSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFER 484
SNLCTEIVE+SS +E AVCNL+SI LP+++ D+ + FD+++
Sbjct: 463 GSNLCTEIVEYSSADEYAVCNLSSICLPKFI----------------IHDNDSPKFDYDK 506
Query: 485 LAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQ 544
L ++ +IIT NLN IID+N+YP++ T SNLRHRPIGIG+QGLAD F L PF+S A+
Sbjct: 507 LYKIARIITRNLNNIIDINYYPVDKTLVSNLRHRPIGIGVQGLADVFALFKTPFDSDIAR 566
Query: 545 QLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP---SDRWDWS 601
LN+ IFETIY+ A+ S ++A + GPYET++GSP+SKG Q D+WNI+ S WDW
Sbjct: 567 DLNRKIFETIYFGAMTESLQMAKEFGPYETFWGSPLSKGKFQFDLWNISANKLSGMWDWE 626
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
+LR+ I +GVRNSL MPTASTSQI G NEC EP+T NIY+R L+G++ V+NK+L+
Sbjct: 627 TLRKEIMIHGVRNSLTTTCMPTASTSQIKGYNECIEPFTENIYSRSTLAGDYYVINKYLI 686
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
+DL ELGLW+ + I Y GS++ IS IP+ +K IY+TVWEI QK++++MAADR ++
Sbjct: 687 QDLMELGLWNSDMVDLIKYYQGSIANISTIPQNIKEIYRTVWEIPQKSIIEMAADRAPFV 746
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL----- 776
DQ+QS+NI +E+PD KL S FYA+ G+KTGMYYLR + A+ A +F +D +
Sbjct: 747 DQTQSMNIFIEKPDFIKLNSCLFYAYRLGLKTGMYYLRGKPASSANQFGIDIEKIKEIEA 806
Query: 777 NNEKANRADNDV--EANLAQVVCS-----LKNQEECMAC 808
N +R N + E +C L+ +C +C
Sbjct: 807 KNNITSRVQNTIIEEEPTVLRICQYVPKHLRKPGDCFSC 845
>gi|307205346|gb|EFN83694.1| Ribonucleoside-diphosphate reductase large subunit [Harpegnathos
saltator]
Length = 701
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/710 (50%), Positives = 484/710 (68%), Gaps = 21/710 (2%)
Query: 51 VTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSG 110
+TT +LD LAA+ AA+M H DY +LAGR+A+SNLHK TK FSE I +Y+
Sbjct: 1 MTTVELDTLAADIAASMVNQHMDYEILAGRIAISNLHKETKKVFSEVITQLYHGNLSIMN 60
Query: 111 KKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHM 170
++ +++ Y II ++A L+ AIIYDRDF++ Y FK LE +LL+++ +VVERPQHM
Sbjct: 61 RRLPRISEKYYTIIQEHADRLNSAIIYDRDFNYSYTAFKILENKHLLRLNGKVVERPQHM 120
Query: 171 LMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
LMRV+V IH DD D+A++TY+L+S+ + HA TL +A T + Q++S FLL M +DSI+G
Sbjct: 121 LMRVAVSIHNDDVDNAIETYNLLSKQYIVHAAQTLNSACTVKQQMASSFLLTMSEDSIDG 180
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
I D+L++ A++ G IG ++H IRA + I GT G SNG+VPML+ +N + V +
Sbjct: 181 ILDSLERVAVLCHHNGDIGFNVHCIRAKNTPIRGTGGVSNGLVPMLRAYNTSIPTVCRKN 240
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
+G +YLEPWH+DI++FL+L+++ G E+ RA+D+FYALW PD+FM RV DD WSL
Sbjct: 241 --IEGPITVYLEPWHSDIYQFLELKRDIGDEQLRAKDMFYALWTPDIFMRRVFDDADWSL 298
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDS 410
CP + GL D WG EFE LY +YEEE R + + AR LW I QI+TGTPY+++KD
Sbjct: 299 MCPHECPGLIDVWGDEFEALYIRYEEENRYRKQVKARDLWVFITQLQIQTGTPYIVYKDH 358
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN KSNQQNLGTI + TE++++S+ +E A C+LA+IA+ +V
Sbjct: 359 CNLKSNQQNLGTINCGSFSTEVIQYSASDEIAACHLATIAVDMFV--------------- 403
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
+S + +DF +L +V KI+T NL+K+IDVN YP+E S R R IGI GLAD
Sbjct: 404 ---NSTTKTYDFSKLKKVVKIVTYNLDKMIDVNLYPLEEVTFSAYRQRAIGISASGLADA 460
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
FIL+ PFES EA++LN IFET YY AL+AS E+A++DGPY TY GSP+SKGILQ +MW
Sbjct: 461 FILMRYPFESKEAKKLNVQIFETFYYGALEASCEMAIEDGPYATYEGSPVSKGILQYEMW 520
Query: 591 NITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLS 650
N P+D WDW +L+ I+K GVRNSLL+A +Q+LGNNE PYTSNI T S
Sbjct: 521 NAKPTDLWDWDTLKAKIAKYGVRNSLLIAQTSDTFMAQMLGNNESVGPYTSNICTMHASS 580
Query: 651 GEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTL 710
F V KHLL+DL E GLWS + KII GS+ I +IP++LK +YKT WE+ QK +
Sbjct: 581 KLFPYVKKHLLRDLIEKGLWSEDMCNKIISNGGSIQDIDDIPDDLKLLYKTAWEMPQKRI 640
Query: 711 VDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRT 760
+MAA RG +IDQSQ LN+HM+ P KLTS+HFYAW G+K+ MY+ +T
Sbjct: 641 FEMAAARGPFIDQSQCLNVHMKDPS-DKLTSMHFYAWEIGLKSSMYHFKT 689
>gi|448935705|gb|AGE59255.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus OR0704.2.2]
Length = 765
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/791 (47%), Positives = 520/791 (65%), Gaps = 54/791 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSY---------------GLSKEHCDPVLVAQKVCA 45
M VIKRDG EPV FDKI R+ +L + GL+ D + +CA
Sbjct: 9 MNVIKRDGSAEPVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLA---VDISRIVASICA 65
Query: 46 GVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYY 105
+ +TT QLD+L A+ AA++T +PDY +LA R+A+SNL K T S++I D Y+
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYS-- 119
Query: 106 NKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVE 165
K L++D+ ++ I YDRDFDFDYFGF T++R YL K+DS+++E
Sbjct: 120 -----KLEHLLSDEFMNLVRTYGDKYQAFIDYDRDFDFDYFGFSTMQRLYLTKVDSKIIE 174
Query: 166 RPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLL-CMK 224
RPQH +RV++ + D + +TY +S+ FTHA+PTLFNAG + L+SCFL+ C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTAR 284
+DS+ I+ L A +SK GGIGL + +IR G+ I GTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLTDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRD 344
Y +QGG +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+WV DLFM+RV
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 DGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPY 404
D +WSL P + GL+D +G E+E LY++YE EG+AK V+ AR +W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+L KDS N K+ Q N GTIK SNLC EIVE++S EETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
KN FDFE L + K++T+NL++ IDV Y + SN R RP+G+G+
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
QGL D F L +PF+S +A++LN++IFE IY+ A++AS EL+ + GP+ T+ GSP SKG+
Sbjct: 512 QGLQDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGV 571
Query: 585 LQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +W +TP DW+ L + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
+RR L+GEF VVN +L+++L G WS A+K +II GSV K+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSVQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I KT++D+AADRG ++DQ+QS N+ + P +TS+ FYAW KG+KT +YY R++ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSQNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448929790|gb|AGE53357.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus Fr5L]
Length = 765
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/791 (48%), Positives = 519/791 (65%), Gaps = 54/791 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSY---------------GLSKEHCDPVLVAQKVCA 45
M VIKRDG E V FDKI R+ +L + GL+ D + +CA
Sbjct: 9 MNVIKRDGSAEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLA---VDISRIVASICA 65
Query: 46 GVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYY 105
+ +TT QLD+L A+ AA++T +PDY +LA R+A+SNL K T S++I D Y
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYT-- 119
Query: 106 NKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVE 165
K L++D+ ++ G I YDRDFDFDYFGF T++R YL K+DS+++E
Sbjct: 120 -----KLEHLLSDEFMNLVHTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVDSKIIE 174
Query: 166 RPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLL-CMK 224
RPQH +RV++ + D + +TY +S+ FTHA+PTLFNAG + L+SCFL+ C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTAR 284
+DS+ I+ L A +SK GGIGL + +IR G+ I GTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLTDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRD 344
Y +QGG +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+WV DLFM+RV
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 DGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPY 404
D +WSL P + GL+D +G E+E LY++YE EG+AK V+ AR +W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+L KDS N K+ Q N GTIK SNLC EIVE++S EETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
KN FDFE L + K++T+NL++ IDV Y + SN R RP+G+G+
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
QGL D F L +PF+S +A++LN++IFE IY+ A++AS EL+ + GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFKLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +W +TP DW+ L + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
+RR L+GEF VVN +L+++L G WS A+K +II GSV K+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSVQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I KT++D+AADRG ++DQ+QS N+ + P +TS+ FYAW KG+KT +YY R++ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSQNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448928435|gb|AGE52006.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CVM-1]
Length = 765
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/791 (47%), Positives = 520/791 (65%), Gaps = 54/791 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSY---------------GLSKEHCDPVLVAQKVCA 45
M VIKRDG E V FDKI R+ +L + GL+ D + +CA
Sbjct: 9 MNVIKRDGSAEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLA---VDISRIVASICA 65
Query: 46 GVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYY 105
+ +TT QLD+L A+ AA++T +PDY +LA R+A+SNL K T S++I D Y
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYT-- 119
Query: 106 NKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVE 165
K L++D+ ++ G I YDRDFDFDYFGF T++R YL K+ S+++E
Sbjct: 120 -----KLEHLLSDEFMNLVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLL-CMK 224
RPQH +RV++ + D + +TY +S+ FTHA+PTLFNAG + L+SCFL+ C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTAR 284
+DS+ I+ L A +SK GGIGL + +IR G+ I GTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRD 344
Y +QGG +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+WV DLFM+RV
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 DGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPY 404
D +WSL P + GL+D +G E+E LY++YE EG+AK V+ AR +W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+L KDS N K+ Q N GTIK SNLC EIVE++S EETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
KN FDFE L + K++T+NL++ IDV Y + SN R RP+G+G+
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
QGL D F L +PF+S +A++LN++IFE IY+ A++AS EL+ + GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +W +TP DW+ L + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
+RR L+GEF VVN +L+++L G WS A+K +II GS+ K+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I KT++D+AADRG ++DQ+QS+N+ + P +TS+ FYAW KG+KT +YY+R++ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448927093|gb|AGE50668.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CVA-1]
gi|448928776|gb|AGE52346.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CVR-1]
Length = 765
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/791 (47%), Positives = 520/791 (65%), Gaps = 54/791 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSY---------------GLSKEHCDPVLVAQKVCA 45
M VIKRDG E V FDKI R+ +L + GL+ D + +CA
Sbjct: 9 MNVIKRDGSTEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLA---VDISRIVASICA 65
Query: 46 GVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYY 105
+ +TT QLD+L A+ AA++T +PDY +LA R+A+SNL K T S++I D Y
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYT-- 119
Query: 106 NKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVE 165
K L++D+ ++ G I YDRDFDFDYFGF T++R YL K+ S+++E
Sbjct: 120 -----KLEHLLSDEFMNLVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLL-CMK 224
RPQH +RV++ + D + +TY +S+ FTHA+PTLFNAG + L+SCFL+ C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTAR 284
+DS+ I+ L A +SK GGIGL + +IR G+ I GTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRD 344
Y +QGG +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+WV DLFM+RV
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 DGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPY 404
D +WSL P + GL+D +G E+E LY++YE EG+AK V+ AR +W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+L KDS N K+ Q N GTIK SNLC EIVE++S EETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
KN FDFE L + K++T+NL++ IDV Y + SN R RP+G+G+
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
QGL D F L +PF+S +A++LN++IFE IY+ A++AS EL+ + GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +W +TP DW+ L + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLETRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
+RR L+GEF VVN +L+++L G WS A+K +II GS+ K+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I KT++D+AADRG ++DQ+QS+N+ + P +TS+ FYAW KG+KT +YY+R++ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448927759|gb|AGE51332.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CVG-1]
Length = 765
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/791 (47%), Positives = 520/791 (65%), Gaps = 54/791 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSY---------------GLSKEHCDPVLVAQKVCA 45
M VIKRDG E V FDKI R+ +L + GL+ D + +CA
Sbjct: 9 MNVIKRDGSAEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLA---VDISRIVASICA 65
Query: 46 GVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYY 105
+ +TT QLD+L A+ AA++T +PDY +LA R+A+SNL K T S++I D Y
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYT-- 119
Query: 106 NKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVE 165
K L++D+ ++ G I YDRDFDFDYFGF T++R YL K+ S+++E
Sbjct: 120 -----KLEHLLSDEFMNLVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLL-CMK 224
RPQH +RV++ + D + +TY +S+ FTHA+PTLFNAG + L+SCFL+ C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTAR 284
+DS+ I+ L A +SK GGIGL + +IR G+ I GTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRD 344
Y +QGG +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+WV DLFM+RV
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 DGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPY 404
D +WSL P + GL+D +G E+E LY++YE EG+AK V+ AR +W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+L KDS N K+ Q N GTIK SNLC EIVE++S EETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
KN FDFE L + K++T+NL++ IDV Y + SN R RP+G+G+
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
QGL D F L +PF+S +A++LN++IFE IY+ A++AS EL+ + GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFKLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +W +TP DW+ L + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLETRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
+RR L+GEF VVN +L+++L G WS A+K +II GS+ K+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I KT++D+AADRG ++DQ+QS+N+ + P +TS+ FYAW KG+KT +YY+R++ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448929444|gb|AGE53012.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CZ-2]
Length = 765
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/791 (47%), Positives = 520/791 (65%), Gaps = 54/791 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSY---------------GLSKEHCDPVLVAQKVCA 45
M VIKR+G EPV FDKI R+ +L + GL+ D + +CA
Sbjct: 9 MNVIKRNGSAEPVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLA---VDISRIVASICA 65
Query: 46 GVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYY 105
+ +TT QLD+L A+ AA++T +PDY +LA R+A+SNL K T S++I D Y+
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYS-- 119
Query: 106 NKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVE 165
K L++D+ ++ I YDRDFDFDYFGF T++R YL K+DS+++E
Sbjct: 120 -----KLEHLLSDEFMNLVRTYGDKYQAFIDYDRDFDFDYFGFSTMQRLYLTKVDSKIIE 174
Query: 166 RPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLL-CMK 224
RPQH +RV++ + D + +TY +S+ FTHA+PTLFNAG + L+SCFL+ C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTAR 284
+DS+ I+ L A +SK GGIGL + +IR G+ I GTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLTDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRD 344
Y +QGG +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+WV DLFM+RV
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 DGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPY 404
D +WSL P + GL+D +G E+E LY++YE EG+AK V+ AR +W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYETEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+L KDS N K+ Q N GTIK SNLC EIVE++S EETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
KN FDFE L + K++T+NL++ IDV Y + SN R RP+G+G+
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
QGL D F L +PF+S +A++LN++IFE IY+ A++AS EL+ + GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFKLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +W +TP DW+ L + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
+RR L+GEF VVN +L+++L G WS A+K +II GS+ K+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I KT++D+AADRG ++DQ+QS N+ + P +TS+ FYAW KG+KT +YY R++ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSQNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448925405|gb|AGE48985.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus AP110A]
Length = 765
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/791 (47%), Positives = 519/791 (65%), Gaps = 54/791 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSY---------------GLSKEHCDPVLVAQKVCA 45
M VIKRDG E V FDKI R+ +L + GL+ D + +CA
Sbjct: 9 MNVIKRDGSAEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLA---VDISRIVASICA 65
Query: 46 GVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYY 105
+ +TT QLD+L A+ AA++T +PDY +LA R+A+SNL K T S++I D Y
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYT-- 119
Query: 106 NKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVE 165
K L++D+ + G I YDRDFDFDYFGF T++R YL K+ S+++E
Sbjct: 120 -----KLEHLLSDEFMNFVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLL-CMK 224
RPQH +RV++ + D + +TY +S+ FTHA+PTLFNAG + L+SCFL+ C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTAR 284
+DS+ I+ L A +SK GGIGL + +IR G+ I GTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRD 344
Y +QGG +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+WV DLFM+RV
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 DGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPY 404
D +WSL P + GL+D +G E+E LY++YE EG+AK V+ AR +W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+L KDS N K+ Q N GTIK SNLC EIVE++S EETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
KN FDFE L + K++T+NL++ IDV Y + SN R RP+G+G+
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
QGL D F L +PF+S +A++LN++IFE IY+ A++AS EL+ + GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +W++TP DW+ L + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWSVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
+RR L+GEF VVN +L+++L G WS +K +II GS+ K+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSETMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I KT++D+AADRG ++DQ+QS+N+ + P +TS+ FYAW KG+KT +YY+R++ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|155370864|ref|YP_001426398.1| hypothetical protein FR483_N766L [Paramecium bursaria Chlorella
virus FR483]
gi|155124184|gb|ABT16051.1| hypothetical protein FR483_N766L [Paramecium bursaria Chlorella
virus FR483]
Length = 765
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/791 (47%), Positives = 519/791 (65%), Gaps = 54/791 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSY---------------GLSKEHCDPVLVAQKVCA 45
M VIKRDG E V FDKI R+ +L + GL+ D + +CA
Sbjct: 9 MNVIKRDGSTEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLA---VDISRIVASICA 65
Query: 46 GVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYY 105
+ +TT QLD+L A+ AA++T +PDY +LA R+A+SNL K T S++I D Y
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYT-- 119
Query: 106 NKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVE 165
K L++D+ ++ G I YDRDFDFDYFGF T++R YL K+ S+++E
Sbjct: 120 -----KLEHLLSDEFMNLVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLL-CMK 224
RPQH +RV++ + D + +TY +S+ FTHA+PTLFNAG + L+SCFL+ C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTAR 284
+DS+ I+ L A +SK GGIGL + +IR G+ I GTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRD 344
Y +QGG +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+WV DLFM+RV
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 DGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPY 404
D +WSL P + GL+D +G E+E LY++YE EG+AK V+ AR +W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+L KDS N K+ Q N GTIK SNLC EIVE++S EETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
KN FDFE L + K++T+NL++ IDV Y + SN R RP+G+G+
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
QGL D F L +PF+S +A++LN++IFE IY+ A++AS EL+ + GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +W +TP DW+ L + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
+RR L+GEF VVN +L+++L G WS +K +II GS+ K+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSETMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I KT++D+AADRG ++DQ+QS+N+ + P +TS+ FYAW KG+KT +YY+R++ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448927432|gb|AGE51006.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CVB-1]
Length = 765
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/791 (47%), Positives = 519/791 (65%), Gaps = 54/791 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSY---------------GLSKEHCDPVLVAQKVCA 45
M VIKRDG E V FDKI R+ +L + GL+ D + +CA
Sbjct: 9 MNVIKRDGSTEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLA---VDISRIVASICA 65
Query: 46 GVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYY 105
+ +TT QLD+L A+ AA++T +PDY +LA R+A+SNL K T S++I D Y
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTY--- 118
Query: 106 NKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVE 165
K L++D+ ++ G I YDRDFDFDYFGF T++R YL K+ S+++E
Sbjct: 119 ----AKLEHLLSDEFMNLVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLL-CMK 224
RPQH +RV++ + D + +TY +S+ FTHA+PTLFNAG + L+SCFL+ C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTAR 284
+DS+ I+ L A +SK GGIGL + +IR G+ I GTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRD 344
Y +QGG +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+WV DLFM+RV
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 DGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPY 404
D +WSL P + GL+D +G E+E LY++YE EG+AK V+ AR +W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+L KDS N K+ Q N GTIK SNLC EIVE++S EETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
KN FDFE L + K++T+NL++ IDV Y + SN R RP+G+G+
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
QGL D F L +PF+S +A++LN++IFE IY+ A++AS EL+ + GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +W +TP DW+ L + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRVQK-GVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
+RR L+GEF VVN +L+++L WS A+K +II GS+ K+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARETWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I KT++D+AADRG ++DQ+QS+N+ + P +TS+ FYAW KG+KT +YY+R++ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|197247241|gb|AAI65359.1| Rrm1 protein [Danio rerio]
Length = 509
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/517 (63%), Positives = 413/517 (79%), Gaps = 19/517 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 12 MHVIKRDGRQERVMFDKITSRIQKLCYGLNSDFVDPTQITMKVIQGLYSGVTTVELDTLA 71
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA +T HPDYA+LA R+AVSNLHK TK FSE ++D+YNY N + + + +++ +
Sbjct: 72 AEIAATLTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNSRHSPMISKET 131
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF +++FGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 132 LDIVLANKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 191
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 192 EDIAAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 251
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 252 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 311
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIF+FL+L+KN GKEE RARDLFYALW+PDLFM+RV +G WSL CP+D GL
Sbjct: 312 LEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNGDWSLMCPNDCPGLD 371
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY++YE+EGRAK V+ A++LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 372 ECWGEEFEKLYAKYEQEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 431
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLASIAL YV + R F
Sbjct: 432 GTIKCSNLCTEIVEYTSADEVAVCNLASIALNMYV-------------------TSERTF 472
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRH 517
DF++LA VTK+I +NLNKIID+N+YP++ RS H
Sbjct: 473 DFQKLASVTKVIVKNLNKIIDINYYPVKDGCRSRSLH 509
>gi|27882097|gb|AAH44356.1| Rrm1 protein [Danio rerio]
Length = 498
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/517 (63%), Positives = 413/517 (79%), Gaps = 19/517 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNSDFVDPTQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA +T HPDYA+LA R+AVSNLHK TK FSE ++D+YNY N + + + +++ +
Sbjct: 61 AEIAATLTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNSRHSPMISKET 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF +++FGFKTLERSYLLK++ +V ERPQHMLMRVSVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D +A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIAAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIF+FL+L+KN GKEE RARDLFYALW+PDLFM+RV +G WSL CP+D GL
Sbjct: 301 LEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNGDWSLMCPNDCPGLD 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY++YE+EGRAK V+ A++LW+ I+ SQ ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 ECWGEEFEKLYAKYEQEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLASIAL YV + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSADEVAVCNLASIALNMYV-------------------TSERTF 461
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRH 517
DF++LA VTK+I +NLNKIID+N+YP++ RS H
Sbjct: 462 DFQKLASVTKVIVKNLNKIIDINYYPVKDGCRSRSLH 498
>gi|448934617|gb|AGE58170.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus NW665.2]
Length = 765
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/791 (47%), Positives = 517/791 (65%), Gaps = 54/791 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSY---------------GLSKEHCDPVLVAQKVCA 45
M VIKRDG E V FDKI R+ +L + GL+ D + +CA
Sbjct: 9 MNVIKRDGSAEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLA---VDISRIVASICA 65
Query: 46 GVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYY 105
+ +TT QLD+L A+ AA++T +PDY +LA R+A+SNL K T S++I D Y
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYT-- 119
Query: 106 NKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVE 165
K L++D+ ++ G I YDRDFDFDYFGF T++R YL K+ S+++E
Sbjct: 120 -----KLEHLLSDEFMNLVHTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLL-CMK 224
RPQH +RV++ + D + +TY +S+ FTHA+PTLFNAG + L+SCFL+ C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTAR 284
+DS+ I+ L A +SK GGIGL + +IR G+ I GTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRD 344
Y +QGG +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+WV DLFM+RV
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 DGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPY 404
D +WSL P + GL+D +G E+E LY++YE EG+AK V+ AR +W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+L KDS N K+ Q N GTIK SNLC EIVE++S EETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
KN FDFE L + K++T+NL++ IDV Y + SN R RP+G+G+
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
QGL D F L +PF+S +A++LN++IFE IY+ A++AS EL+ + GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFKLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +W +TP DW+ L + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
+RR L+GEF VVN +L+++L G WS +K +II GS+ K+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSETMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I KT++D+AADRG ++DQ+QS N+ + P +TS+ FYAW KG+KT +YY R++ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSQNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|155122463|gb|ABT14331.1| hypothetical protein MT325_M777L [Paramecium bursaria chlorella
virus MT325]
Length = 765
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/791 (47%), Positives = 520/791 (65%), Gaps = 54/791 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSY---------------GLSKEHCDPVLVAQKVCA 45
M VIKR+G E V FDKI R+ +L + GL+ D + +CA
Sbjct: 9 MNVIKRNGSSEAVSFDKIMTRISRLCWPENGKPTHRGSRAQNGLA---VDISRIVANICA 65
Query: 46 GVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYY 105
+ +TT QLD+L A+ AA++T +PDY +LA R+A+SNL K T S++I D Y+
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYS-- 119
Query: 106 NKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVE 165
K L++D+ ++ + I YDRDFDFDYFGF T++R YL K+ S+++E
Sbjct: 120 -----KLEHLLSDEFMNLVRTHGDQYQAFIDYDRDFDFDYFGFATMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLL-CMK 224
RPQH +RV++ + D + +TY +S+ FTHA+PTLFNAG + L+SCFL+ C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTAR 284
+DS+ I+ L A +SK GGIGL + +IR G+ I GTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLTDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRD 344
Y +QGG +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+WV DLFM+RV
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 DGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPY 404
D +WSL P + GL+D +G E+E LY++YE EG+AK V+ AR +W ++ +Q+ETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQMETGMPY 411
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+L KDS N K+ Q N GTIK SNLC EIVE++S EETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
KN FDFE L + K++T+NL++ IDV Y + SN R RP+G+G+
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
QGL D F L +PF+S +A++LN++IFE IY+ A++AS EL+ + GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +W +TP DW+ L + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
+RR L+GEF VVN +L+++L G WS A+K +II GS+ K+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I KT++D+AADRG ++DQ+QS+N+ + P +TS+ FYAW KG+KT +YY R++ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448932906|gb|AGE56464.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus NE-JV-1]
Length = 764
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/788 (47%), Positives = 514/788 (65%), Gaps = 48/788 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSY--GLSKEH----------CDPVLVAQKVCAGVY 48
M VIKRDG E V FDKI R+ +L + G H D + VC+ +
Sbjct: 8 MNVIKRDGSTEAVSFDKIMTRIGRLCWPEGGKPTHRGSRIQSGLDVDISRIVGSVCSSIV 67
Query: 49 KGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKR 108
+TT +LDEL A+ AA++T +PDY +LA R+AVSNL K T +S +T ++M
Sbjct: 68 DNITTVKLDELTADKAASLTTLNPDYGILAARIAVSNLQKQTTDSVVDTFEEM------- 120
Query: 109 SGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQ 168
+ L++DD + + + YDRDFDFDYFGF T++R YL K+ S++VERPQ
Sbjct: 121 ----SHLLSDDFLKNVRTYGDVYQSIVDYDRDFDFDYFGFSTMQRLYLTKVGSKIVERPQ 176
Query: 169 HMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLL-CMKDDS 227
H +RV++ + + + +TY +S+ FTHA+PTLFNAG + L+SCFL+ C DDS
Sbjct: 177 HTYLRVAIALWGSNIERVKETYDALSRRKFTHASPTLFNAGFKKSNLASCFLVHC--DDS 234
Query: 228 IEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVD 287
+ I+ L A +SK GGIGL + +IR GS I GTNG S+GIVPML+VF+ T+ Y +
Sbjct: 235 LSDIFKCLGDVAQLSKYGGGIGLHLSDIRGRGSAIKGTNGESDGIVPMLKVFDATSAYAN 294
Query: 288 QGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGK 347
QGG +RKG+FA+YLEP H DI +FL LR+NQG E RAR+LFYA+W+ DLFM RV D +
Sbjct: 295 QGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGDESLRARNLFYAVWLNDLFMRRVEADAQ 353
Query: 348 WSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLF 407
WSL P + GL +++G E+E LY +YE EG+A V+ AR +W ++ +QIETG PY+
Sbjct: 354 WSLLDPHECPGLTEAFGKEYEDLYVRYESEGKAVKVVKARDVWNSMVTTQIETGMPYVAN 413
Query: 408 KDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVS 467
KDS N K+ Q N GTIK SNLC EI+E++S EE AVC + SI L YV
Sbjct: 414 KDSVNAKNMQANAGTIKGSNLCCEILEYTSSEEIAVCVIGSIVLKNYV------------ 461
Query: 468 KLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGL 527
KN FDF+ L + KI+ +NL++ IDV Y +E R SN+R RPIG+G+QGL
Sbjct: 462 --------KNGKFDFDDLRKHVKILAKNLDRSIDVMSYAVEEARVSNMRRRPIGVGVQGL 513
Query: 528 ADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQV 587
D F L +PF+S A+ LN+DIFE IY+ A++AS ELA + GP+ T+ GSP SKG++Q
Sbjct: 514 QDVFFKLKMPFDSEAARDLNRDIFEHIYFAAVEASCELADELGPHPTFEGSPASKGVMQY 573
Query: 588 DMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRR 647
+W +TP DWS L E + K GVRNSL A MPTAST+QI G+ E EP TSNIY+RR
Sbjct: 574 HLWGVTPQTALDWSGLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNIYSRR 632
Query: 648 VLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQ 707
L+GEF VVN +L+++L G WS ++K +II GS+ ++ I ++KA+YKT WE+
Sbjct: 633 TLAGEFPVVNSYLVRELINRGTWSESMKDQIIANGGSIQRVIGIHPDVKAVYKTSWELSM 692
Query: 708 KTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAI 767
K+++DMAADRG ++DQ+QS+N+ + P +TS+ FY W KG+KT +YYLR++ AA+AI
Sbjct: 693 KSVIDMAADRGAFVDQTQSMNLFLASPTLKSVTSMLFYGWKKGLKTMLYYLRSKPAANAI 752
Query: 768 KFTVDTSV 775
+ TVD +
Sbjct: 753 QVTVDECI 760
>gi|448926428|gb|AGE50005.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus Can18-4]
Length = 765
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/791 (47%), Positives = 519/791 (65%), Gaps = 54/791 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSY---------------GLSKEHCDPVLVAQKVCA 45
M VIKR+G E V FDKI R+ +L + GL+ D + +CA
Sbjct: 9 MNVIKRNGSSEAVSFDKIMTRISRLCWPENGKPTHRGSRAQNGLA---VDISRIVANICA 65
Query: 46 GVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYY 105
+ +TT QLD+L A+ AA++T +PDY +LA R+A+SNL K T S++I D Y+
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYS-- 119
Query: 106 NKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVE 165
K L++D+ ++ I YDRDFDFDYFGF T++R YL K+ S+++E
Sbjct: 120 -----KLEHLLSDEFMNLVRTYGDQYQAFIDYDRDFDFDYFGFATMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLL-CMK 224
RPQH +RV++ + D + +TY +S+ FTHA+PTLFNAG + L+SCFL+ C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTAR 284
+DS+ I+ L A +SK GGIGL + +IR G+ I GTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLTDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRD 344
Y +QGG +RKG+FA+YLEP H DI +FL LR+NQG+E RAR+LFYA+WV DLFM+RV
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 DGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPY 404
D +WSL P + GL+D +G E+E LY++YE EG+AK V+ AR +W ++ +Q+ETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYETEGKAKRVVKARDVWNTMVTTQMETGMPY 411
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+L KDS N K+ Q N GTIK SNLC EIVE++S EETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
KN FDFE L + K++T+NL++ IDV Y + SN R RP+G+G+
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
QGL D F L +PF+S +A++LN++IFE IY+ A++AS EL+ + GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +W +TP DW+ L + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
+RR L+GEF VVN +L+++L G WS A+K +II GS+ K+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I KT++D+AADRG ++DQ+QS+N+ + P +TS+ FYAW KG+KT +YY R++ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|350588224|ref|XP_003129661.3| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Sus scrofa]
Length = 634
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/518 (64%), Positives = 404/518 (77%), Gaps = 19/518 (3%)
Query: 293 RKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFC 352
R GAFAIYLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL C
Sbjct: 136 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 195
Query: 353 PSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCN 412
P++ GL + WG EFE LY YE +G + V+ A++LW+ I+ SQ ETGTPYML+KDSCN
Sbjct: 196 PNECPGLDEVWGEEFEKLYESYERQGHVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCN 255
Query: 413 RKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
RKSNQQNLGTIK SNLCTEIVE++S +E AVCNLAS+AL YV
Sbjct: 256 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV----------------- 298
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
+ +DF +LAEVTK+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FI
Sbjct: 299 --TSEHTYDFTKLAEVTKVIVRNLNKIIDINYYPIPEASLSNKRHRPIGIGVQGLADAFI 356
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L+ PFESPEAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+SKGILQ DMWN+
Sbjct: 357 LMRYPFESPEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNV 416
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
TP+D WDW L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGE
Sbjct: 417 TPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGE 476
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F +VN HLLKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++
Sbjct: 477 FQIVNPHLLKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLK 536
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
MAA+RG +IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++
Sbjct: 537 MAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLN 596
Query: 773 TSVLNNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
L +++ + + E N A +VCSL+N++EC+ CGS
Sbjct: 597 KEKLKDKEKVSKEEEKERNTAAMVCSLENRDECLMCGS 634
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 108/160 (67%), Gaps = 6/160 (3%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D++NY N +GK + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVARST 120
Query: 121 YEIIMKNA-ACL----DGAI-IYDRDFDFDYFGFKTLERS 154
+I++ N C+ GA IY + D F F L+++
Sbjct: 121 LDIVLANKDVCIMLFRPGAFAIYLEPWHLDIFEFLDLKKN 160
>gi|269859792|ref|XP_002649620.1| ribonucleoside-diphosphate reductase large chain [Enterocytozoon
bieneusi H348]
gi|220066983|gb|EED44452.1| ribonucleoside-diphosphate reductase large chain [Enterocytozoon
bieneusi H348]
Length = 769
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/763 (46%), Positives = 502/763 (65%), Gaps = 34/763 (4%)
Query: 41 QKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKD 100
++V +G+ +T ++ + +E AA+M HP+Y LA + + LH T +FSE
Sbjct: 35 KQVSSGLAMEMTCEEMSKYCSEVAASMITLHPNYNKLASVILIKYLHCSTHENFSERFLL 94
Query: 101 MYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMD 160
+++ N + +D+ +++ + D I D+ FDYFG TL ++YL K++
Sbjct: 95 LHSELN--------IFDEDIVQLVKLHRKYYDDIIDSTNDYLFDYFGLITLFKTYLNKIN 146
Query: 161 SRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFL 220
+ +VERPQ + M+V++ +H+ + D TY L+S ++TH TPTL+N+ +PQ++SCFL
Sbjct: 147 NSIVERPQDIYMKVAIQLHRSNFDDVKTTYELLSNFYYTHGTPTLYNSCLKKPQMASCFL 206
Query: 221 LCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFN 280
L MKDDS+EGI++T+K CA I K GGIG+ + NIR + S I+ T G + GI+P++++ +
Sbjct: 207 LAMKDDSVEGIFETIKDCASIRKFNGGIGMYLTNIRPNKSKINSTGGEAKGIIPVIRLIS 266
Query: 281 DTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFME 340
+T +Y ++ KR + A YLEPWH DIF+FL+LRKN G E+ RARD F L++ D+FME
Sbjct: 267 ETIKYFNKNETKRSTSCAFYLEPWHPDIFDFLNLRKNTGPEDMRARDAFIGLFINDIFME 326
Query: 341 RVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIET 400
RV+++ WSLF PS A+GL ++WG EF LY +Y E+ K+ I A+KLW EI+ +QIET
Sbjct: 327 RVQNNENWSLFDPSIATGLINAWGDEFNKLY-EYYEKTIPKITIPAQKLWKEIICAQIET 385
Query: 401 GTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGV 460
GTPY+++KDSCNR SNQ NLGTIKSSNLC EI+E+S T VCNLASI LP+++
Sbjct: 386 GTPYLVYKDSCNRNSNQNNLGTIKSSNLCAEIIEYSDANITGVCNLASICLPKFI----- 440
Query: 461 PVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPI 520
++ N+ FDF++L +V K +T NLNK+ID++ YP + + SN RPI
Sbjct: 441 -------------NNANQ-FDFKQLYQVMKKVTINLNKLIDISFYPTKEAKYSNEATRPI 486
Query: 521 GIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPM 580
GIG+QGLAD + +PFES +A++LN+ IFET+YY ++ S ELA GPY S
Sbjct: 487 GIGVQGLADALCKMRIPFESSQAKELNRMIFETMYYSVMETSMELAKTYGPYPLITNSMY 546
Query: 581 SKGILQVDMW----NI-TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
SKGI + + NI S WDW LRE I GVRNSL ++ MPTA+T+QI GN+EC
Sbjct: 547 SKGIFHFEKYLKNKNIDILSGLWDWEDLREKIRLYGVRNSLTLSIMPTATTAQICGNSEC 606
Query: 636 FEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEEL 695
EP TSNIYTRR GEF +VNK+L+ DL +LGLWS+ +K II NGS+ I IP +
Sbjct: 607 VEPITSNIYTRRTFVGEFQIVNKYLMNDLIKLGLWSNEMKQLIIEYNGSIQNIPTIPSNI 666
Query: 696 KAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
K +YKTVWEIK K ++DMA +R ++DQSQSLN+ + QP + L+S+HFY W G+KTG+
Sbjct: 667 KNLYKTVWEIKMKCILDMAHERQAFVDQSQSLNLFISQPTYAILSSMHFYGWKLGLKTGI 726
Query: 756 YYLRTRAAADAIKFTVDTSVLNNEKANRADNDVE-ANLAQVVC 797
YYLRT A AIKFT+D ++ ++ +++ E N + C
Sbjct: 727 YYLRTSPIASAIKFTIDKELIIRTLSSMKNDECEPPNCKECSC 769
>gi|281339148|gb|EFB14732.1| hypothetical protein PANDA_021921 [Ailuropoda melanoleuca]
Length = 500
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/519 (63%), Positives = 407/519 (78%), Gaps = 20/519 (3%)
Query: 293 RKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFC 352
R GAFAIYLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL C
Sbjct: 1 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 60
Query: 353 PSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCN 412
P++ GL + WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCN
Sbjct: 61 PNECPGLDEVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCN 120
Query: 413 RKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
RKSNQQNLGTIK SNLCTEIVE++S +E AVCNLAS+AL YV
Sbjct: 121 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASVALNMYV----------------- 163
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
+ +DF++LAEVTK+I NLNKIID+N+YP+ SN RHRPIGIG+QGLAD FI
Sbjct: 164 --TSEHTYDFKKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFI 221
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L+ PFESPEAQ LNK IFETIYY AL+AS +LA + GPYETY GSP+S+GILQ DMWN+
Sbjct: 222 LMRYPFESPEAQLLNKQIFETIYYGALEASCDLAREHGPYETYEGSPVSRGILQYDMWNV 281
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
TP+D WDW L+E I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGE
Sbjct: 282 TPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGE 341
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F +VN HLLKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++
Sbjct: 342 FQIVNPHLLKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLK 401
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
MAA+RG +IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++
Sbjct: 402 MAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLN 461
Query: 773 TSVLNNEKANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
L +++ + + + N A +VCSL+N+EEC+ CGS
Sbjct: 462 KEKLKDKEKATKEEEEKERNTAAMVCSLENREECLMCGS 500
>gi|154278713|ref|XP_001540170.1| ribonucleoside-diphosphate reductase large subunit [Ajellomyces
capsulatus NAm1]
gi|150413755|gb|EDN09138.1| ribonucleoside-diphosphate reductase large subunit [Ajellomyces
capsulatus NAm1]
Length = 508
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/455 (68%), Positives = 381/455 (83%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KRDGRKE V+FDKITAR+ +L YGL EH D + QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MTV HPDYA LA R+AVSNLHK TK FS I D+Y+Y+N ++ + A +++
Sbjct: 61 AETAAYMTVTHPDYATLAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNQRPAPMISQTT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YE +M++A + AI+YDRDF++ YFGFKTLERSYLL+++ +V ERPQHM+MRV+VGIH
Sbjct: 121 YETVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD + ++TY+LMSQ +FTHA+PTLFNAGTPQPQ++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL+IH IR +GSYI GTNGSSNGIVPML+VFN+TARYVDQGG KR GAFAIY
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDLRKN GKEE RARDLF ALW PDLFM+RV +G+W+LFCP++A GLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY +YE+EGR K + A+KLW+ IL +Q ETG P+ML+KDSCNRKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTVKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYV 455
GTI+SSNLCTEI+E+ SP+E AVCNLASIALP +V
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFV 455
>gi|125541523|gb|EAY87918.1| hypothetical protein OsI_09340 [Oryza sativa Indica Group]
Length = 676
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/408 (80%), Positives = 369/408 (90%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV+KRDGR+E V FDKITARLK+LSYGLS+EHCDPVLVAQKVCAGVYKGVTT+QL ELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKRLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLGELA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAAAMT +HPDYA LA R+A+SNLHK T SFSETIK MY +Y++RSG A L+ADDV
Sbjct: 61 AETAAAMTASHPDYASLAARIAISNLHKTTMKSFSETIKVMYMHYDERSGLLAPLIADDV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
YEIIMKN LD IIYDRDFD+DYFGFKTLERSYLLK+ +VVERPQHMLMRVS+GIHK
Sbjct: 121 YEIIMKNTTRLDSEIIYDRDFDYDYFGFKTLERSYLLKVVGKVVERPQHMLMRVSIGIHK 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD +SA+KTYH+MSQ WFTHA+PTLFNAGTP+PQLSSCFL+CMKDDSIEGIYDTL +CA
Sbjct: 181 DDIESAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLSECAT 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSIHNIRA+GSYI GTNG+SNGIVPML+VFNDTARYVDQGGGKRKGAFAIY
Sbjct: 241 ISKCAGGIGLSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIFEFLDLRKN GKEE RARDLFYALW+PDLFMERV+++ WSLFCP++A GLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEENRARDLFYALWIPDLFMERVQNNENWSLFCPNEAPGLA 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFK 408
D WG EF++LY +YE EG+AK V+SA+ LWF+IL +QIETGTPYML+K
Sbjct: 361 DCWGDEFQNLYKKYEREGKAKKVVSAQALWFDILKAQIETGTPYMLYK 408
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/279 (78%), Positives = 253/279 (90%)
Query: 532 ILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN 591
I G P+ +AQQLNKDIFETIYYHALKASAE+A K+GPYETY GSP+SKGILQ DMWN
Sbjct: 398 IETGTPYMLYKAQQLNKDIFETIYYHALKASAEIAAKEGPYETYSGSPVSKGILQPDMWN 457
Query: 592 ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSG 651
+ PSDRW+WS LREMISK GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSG
Sbjct: 458 VVPSDRWNWSDLREMISKVGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 517
Query: 652 EFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLV 711
EF+VVNKHLL DLTE+G+WS LK KI+YE+GSV KISEIP++LKAIY+TVWEIKQKT+V
Sbjct: 518 EFVVVNKHLLHDLTEMGIWSPVLKNKIVYEDGSVQKISEIPDDLKAIYRTVWEIKQKTIV 577
Query: 712 DMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
DMA DRGCYIDQSQSLNIHM+QP+ GKLTSLHF+AWSKG+KTGMYYLRTRAAADAIKFTV
Sbjct: 578 DMAIDRGCYIDQSQSLNIHMDQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTV 637
Query: 772 DTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMACGS 810
DT++L +++ N + DV++ +A+VVCSL N++EC+ACGS
Sbjct: 638 DTTLLKDKQHNAEEEDVQSKMAEVVCSLNNRDECLACGS 676
>gi|349605784|gb|AEQ00901.1| Ribonucleoside-diphosphate reductase large subunit-like protein,
partial [Equus caballus]
Length = 492
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/511 (63%), Positives = 400/511 (78%), Gaps = 20/511 (3%)
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLF +RV + WSL CP++ GL
Sbjct: 1 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFKKRVESNQDWSLMCPNECPGLD 60
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
+ WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNL
Sbjct: 61 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 120
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
GTIK SNLCTEIVE++S +E AVCNLAS+AL +V + +
Sbjct: 121 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMFV-------------------TSEHTY 161
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
DF++LAEVTK+I NLNKIID+N+YPI SN RHRPIGIG+QGLAD FIL+ PFES
Sbjct: 162 DFQKLAEVTKVIVRNLNKIIDINYYPIPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 221
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDW 600
PEAQ LNK IFETIYY AL+AS +L+ +DGPYETY GSP+SKGILQ DMWN+TP+D WDW
Sbjct: 222 PEAQLLNKQIFETIYYGALEASCDLSKEDGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 281
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
L+E I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HL
Sbjct: 282 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 341
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
LKDLTE GLW+ +K +II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +
Sbjct: 342 LKDLTERGLWNEEMKNQIIACNGSIQSIQEIPDDLKQLYKTVWEISQKTILKMAAERGAF 401
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEK 780
IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++
Sbjct: 402 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 461
Query: 781 ANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
+ + + N A +VCSL+N++EC+ CGS
Sbjct: 462 KASKEEEEKERNTAAMVCSLENRDECLMCGS 492
>gi|385303449|gb|EIF47522.1| ribonucleoside-diphosphate reductase large chain 1 [Dekkera
bruxellensis AWRI1499]
Length = 466
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/455 (67%), Positives = 383/455 (84%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYV KRD R+EPVRFDKITAR+ ++ YGL + DPV VAQ+V GVY GVTT +LD L
Sbjct: 1 MYVFKRDXRREPVRFDKITARISRMCYGLDEXRIDPVAVAQRVVTGVYPGVTTIELDNLT 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA MT HPDYA LA R+A+SNLHK TK FS+ I+D+YNYYN ++ KK+ +++++V
Sbjct: 61 AETAAYMTTIHPDYATLAARLAISNLHKQTKKPFSDVIEDLYNYYNPKTQKKSPMISEEV 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y+I+MK+ L+ AI YDRDF ++YFGFKTLERSYLL+++ +V ERPQH+LMRV+VGIH
Sbjct: 121 YKIVMKHKDELNSAINYDRDFSYNYFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD L++Y LMS+ +FTHA+PTLFNAGTP+PQ+SSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 DDIPKVLESYDLMSKRYFTHASPTLFNAGTPRPQMSSCFLVAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK+AGGIGL IHNIR++GSYI GTNG+SNGI+PM++VFN TARYVDQGG KR GA AIY
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMVRVFNSTARYVDQGGNKRPGAIAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV + W+LF PS+A GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNDTWTLFSPSEAPGLS 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EFE LY++YE+EGR + + A+KLW++IL +Q ETGTP+M++KD+CNRKSNQ+NL
Sbjct: 361 DVYGDEFEKLYTRYEKEGRGRRTVKAQKLWYQILEAQTETGTPFMIYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYV 455
GTIKSSNLC E+VE+SSP+E VCNLA+I LP +V
Sbjct: 421 GTIKSSNLCCEVVEYSSPDEVGVCNLANICLPAFV 455
>gi|347756559|ref|YP_004864122.1| ribonucleoside-diphosphate reductase subunit alpha [Candidatus
Chloracidobacterium thermophilum B]
gi|347589076|gb|AEP13605.1| ribonucleoside-diphosphate reductase, alpha subunit [Candidatus
Chloracidobacterium thermophilum B]
Length = 800
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/817 (44%), Positives = 494/817 (60%), Gaps = 43/817 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G EPV +KI + + GL+ + D VA K G+Y G TT +LD+L+
Sbjct: 17 MRVRKRNGSYEPVDVNKIIRAVGRCCTGLT--NIDAYRVATKTIGGLYDGATTAELDQLS 74
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
TAA++ V P+Y+ LA R+ + +HK +N SFS++I Y+ L+
Sbjct: 75 INTAASLIVEEPEYSRLAARLLATYIHKEVRNQNIYSFSQSITAGYDL---------GLI 125
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSR--VVERPQHMLMRV 174
D V + +N LD AI +RD F+YFG +T+ YLLK + V+E PQ+ +RV
Sbjct: 126 NDRVRNFVSENRRKLDEAICDERDQAFEYFGLRTVYDRYLLKHPTSRAVLETPQYFFLRV 185
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ G+ + + A++ Y L+S + +TPTLFNAGT QLSSCFLL +D + IY
Sbjct: 186 ASGLAQTVAE-AIELYQLLSSLEYMASTPTLFNAGTRHEQLSSCFLLDSPEDDLAAIYQK 244
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A++SK AGGIGL+ H +R+ GS I GTNG SNGIVP L+ + + V+QGG KRK
Sbjct: 245 YTDVALLSKFAGGIGLAYHRVRSKGSLIRGTNGHSNGIVPWLKTLDSSVAAVNQGG-KRK 303
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLEPWHADI +FL+LR N G E R +L A W+PDLFM+RV +DG WSLF P
Sbjct: 304 GACCVYLEPWHADIEDFLELRDNTGDEARRTYNLNLANWIPDLFMKRVEEDGPWSLFDPK 363
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
L D +G EFE Y + E E I AR L+ ++ + +TG +M FKD+ NRK
Sbjct: 364 LVPHLPDLYGEEFEAAYLKAESEKLYTRQIRARDLYQRMMRTLAQTGNGWMTFKDAANRK 423
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
NQ Q + SNLCTEI+E +SP ETAVCNL S+ L R+V +
Sbjct: 424 CNQTAQPGRVVHLSNLCTEIIEVTSPTETAVCNLGSLNLARHVTDG-------------- 469
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
FDFE+LA +I L+++ID+N YPI +T SN R RPIG+G+ GL D F
Sbjct: 470 ------RFDFEKLARNVRIAVRQLDRVIDINFYPIPSTAASNRRWRPIGLGLMGLQDVFF 523
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L LPF+SPEA +L+ I E +YYHAL AS +LA GP+ + + ++GILQ D+W +
Sbjct: 524 QLRLPFDSPEALELSTRIQEEVYYHALAASCDLAEVHGPHPAFPETRAAQGILQFDLWGV 583
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
TP D W +LRE I G+RNSLL+A PTA+ + I G E EP SN++ R LSG+
Sbjct: 584 TPPDPERWKALRERIRATGLRNSLLIAIAPTATIASICGCYEAIEPQVSNLFKRETLSGD 643
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ +N++L++DL LGLW+ ++T+I +GS+ I+ IPE+L+ +Y+T WE+ + L+D
Sbjct: 644 FLQINRYLVEDLKRLGLWNEDIRTQIKLADGSIQGIAAIPEDLRRLYRTAWELPMRALID 703
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV- 771
MAA RG YIDQSQSLN+ ME P GKL+S++ YAW KG+KT YYLR+R A K TV
Sbjct: 704 MAAARGAYIDQSQSLNLFMESPSIGKLSSMYMYAWKKGLKT-TYYLRSRPATTIAKATVA 762
Query: 772 DTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
T+ A ++ A + CSL N E C AC
Sbjct: 763 PTAAGTGGNGPGAPQPTPSDDAALACSLANPESCEAC 799
>gi|390957922|ref|YP_006421679.1| ribonucleoside-diphosphate reductase subunit alpha [Terriglobus
roseus DSM 18391]
gi|390958264|ref|YP_006422021.1| ribonucleoside-diphosphate reductase subunit alpha [Terriglobus
roseus DSM 18391]
gi|390412840|gb|AFL88344.1| ribonucleoside-diphosphate reductase, alpha subunit [Terriglobus
roseus DSM 18391]
gi|390413182|gb|AFL88686.1| ribonucleoside-diphosphate reductase, alpha subunit [Terriglobus
roseus DSM 18391]
Length = 825
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/834 (41%), Positives = 511/834 (61%), Gaps = 61/834 (7%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KR+G EPV +KI +++ YGL +H D + +A K G+Y G TT +LD ++
Sbjct: 26 MHVKKRNGALEPVDVNKIVRAVQRSGYGL--QHVDAIRIASKTIGGLYDGATTRELDAIS 83
Query: 61 AETAAAMTVNHPDYALLAGR---------VAVSNLHKITKNSFSETIKDMYNYYNKRSGK 111
+TAA++ P Y+ LA R VA NLH SFS++++ G
Sbjct: 84 IDTAASLIAEEPQYSKLASRLLLATILKEVAGQNLH-----SFSQSVE---------YGA 129
Query: 112 KASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQH 169
+ +V+ V E + + L+ AI D D F+YFG +T+ YLL+ + +V+E PQH
Sbjct: 130 QVGIVSPAVAEFVRIHMRKLNQAIKEDNDDRFEYFGLRTVYDRYLLRDPLSRKVIETPQH 189
Query: 170 MLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
+RV+ G+ + A++ Y+L+S H + ++PTLFN+GT PQ+SSC+L DS+E
Sbjct: 190 FFLRVACGLAGTPHE-AIEFYNLISSHDYMPSSPTLFNSGTKHPQMSSCYLHDSPQDSLE 248
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
IYD+ K A++SK +GGIGL+ H +R+ GS I TNG SNGIVP L+ + + V+QG
Sbjct: 249 SIYDSYKDVALLSKFSGGIGLAFHRVRSEGSLIRATNGLSNGIVPWLRTLDSSVAAVNQG 308
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G KRKGA +YLEPWHADI FL+LR+N G R +L A W+PDLFM+RV +DG WS
Sbjct: 309 G-KRKGACCVYLEPWHADIESFLELRENTGDLSRRTYNLNLANWIPDLFMKRVDEDGMWS 367
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD 409
LF P L D +G EFE Y Q EE+ + AR L+ ++ S ETG +M FKD
Sbjct: 368 LFDPKLVPQLPDLFGEEFEKAYIQAEEDKIYYRQMKARDLYARMMRSLAETGNGWMTFKD 427
Query: 410 SCNRKSNQQNL--GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVS 467
+CN K+NQ L I SNLCTEI E +S +ETAVCNL S+ L R+++
Sbjct: 428 ACNVKNNQTGLPGNVIHLSNLCTEITEVTSKDETAVCNLGSVNLGRHMK----------- 476
Query: 468 KLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGL 527
+ ++ +FDFE+LA ++ L+++ID+N YP++ ++N R RP+G+G+ GL
Sbjct: 477 ----TDENGKTVFDFEKLANTVRVAVPMLDRVIDINFYPVQQALKANNRWRPVGLGVMGL 532
Query: 528 ADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQV 587
D F + LPF+SPEAQ L+ I E IYY+A+ A+ ELA K+GP+ ++ + +++G Q
Sbjct: 533 QDVFFQMRLPFDSPEAQALSTKIQEEIYYYAMLATTELAEKNGPHPSFNETRLAQGNFQF 592
Query: 588 DMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRR 647
D+W ITPS+ W +LR+ I ++GVRNSLL+A PTA+ + I+G EC EP SN++ R
Sbjct: 593 DLWKITPSEPERWEALRQRIKQSGVRNSLLIAIAPTATIASIVGCYECIEPQISNLFKRE 652
Query: 648 VLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQ 707
LSGEF+ VN++L+ +L LG+W+ ++ K+ GSV I ++ +ELK IY+TVWE+
Sbjct: 653 TLSGEFLQVNRYLINELKALGMWNEEMRMKLKMSEGSVQNIDDLTDELKLIYRTVWEVPM 712
Query: 708 KTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAI 767
++L+DMAA R YIDQ+QSLN+ E P+ G+L+S++ YAW +G+KT YYLR+R A
Sbjct: 713 RSLIDMAAARNAYIDQAQSLNLFSESPNIGRLSSMYMYAWKQGLKT-TYYLRSRPATKIA 771
Query: 768 KFTVDTSVLNNEKANRADNDVEANL-------------AQVVCSLKNQEECMAC 808
K TV +++ A ++ N+ A + CSL+N E C AC
Sbjct: 772 KTTVQKGAMSSSLPQTAQAQLQ-NVSVPEPEQQPIDASAAIACSLENPESCEAC 824
>gi|301792342|ref|XP_002931138.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like,
partial [Ailuropoda melanoleuca]
Length = 477
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/496 (62%), Positives = 386/496 (77%), Gaps = 20/496 (4%)
Query: 316 KNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYE 375
KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP++ GL + WG EFE LY YE
Sbjct: 1 KNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYESYE 60
Query: 376 EEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEF 435
++GR + V+ A++LW+ I+ SQ ETGTPYML+KDSCNRKSNQQNLGTIK SNLCTEIVE+
Sbjct: 61 KQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEY 120
Query: 436 SSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITEN 495
+S +E AVCNLAS+AL YV + +DF++LAEVTK+I N
Sbjct: 121 TSKDEVAVCNLASVALNMYV-------------------TSEHTYDFKKLAEVTKVIVRN 161
Query: 496 LNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIY 555
LNKIID+N+YP+ SN RHRPIGIG+QGLAD FIL+ PFESPEAQ LNK IFETIY
Sbjct: 162 LNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFESPEAQLLNKQIFETIY 221
Query: 556 YHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNS 615
Y AL+AS +LA + GPYETY GSP+S+GILQ DMWN+TP+D WDW L+E I+K G+RNS
Sbjct: 222 YGALEASCDLAREHGPYETYEGSPVSRGILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNS 281
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALK 675
LL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF +VN HLLKDLTE GLW+ +K
Sbjct: 282 LLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWNEEMK 341
Query: 676 TKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPD 735
+II NGS+ I EIP++LK +YKTVWEI QKT++ MAA+RG +IDQSQSLNIH+ +P+
Sbjct: 342 NQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPN 401
Query: 736 HGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEA-NLAQ 794
+GKLTS+HFY W +G+KTGMYYLRTR AA+ I+FT++ L +++ + + + N A
Sbjct: 402 YGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKEKATKEEEEKERNTAA 461
Query: 795 VVCSLKNQEECMACGS 810
+VCSL+N+EEC+ CGS
Sbjct: 462 MVCSLENREECLMCGS 477
>gi|168702495|ref|ZP_02734772.1| ribonucleoside-diphosphate reductase, alpha subunit [Gemmata
obscuriglobus UQM 2246]
Length = 797
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/816 (43%), Positives = 483/816 (59%), Gaps = 54/816 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR G E V +KI +++ S GL DP+ VA K G+Y G TT +LD L+
Sbjct: 27 MQVRKRSGALEDVNVNKIVRAVQRCSGGLPG--VDPMRVAVKTIGGLYDGATTAELDRLS 84
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAA + P+Y+ LA R+ + + K N SFS++I +G + LV
Sbjct: 85 IQTAAGLISEEPEYSRLAARLLATYVDKEVANQDVHSFSQSIA---------AGYRHGLV 135
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM-DSR-VVERPQHMLMRV 174
A + NA L+ A F+YFG +T+ YLL+ D+R V+E P +RV
Sbjct: 136 AGGTMAFVAANARKLNAAAAEPAPDLFEYFGLRTVYDRYLLRHPDTRHVIETPAFFFLRV 195
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ G+ + D A++ Y LMS H + +TPTLFN+GT +PQ+SSC+LL D++E IYD
Sbjct: 196 ACGLAESAAD-AIELYRLMSAHRYLPSTPTLFNSGTARPQMSSCYLLDSPADALEAIYDR 254
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A +SK AGGIGL+ H IR+ GS I GTNG SNGIVP L+ + + V+QGG KRK
Sbjct: 255 YADVAKLSKFAGGIGLAYHRIRSRGSLIRGTNGHSNGIVPWLKTLDSSVAAVNQGG-KRK 313
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHAD+ EFL+LR N G R +L A WVPDLFM RV WSLF P
Sbjct: 314 GACCVYLETWHADVEEFLELRDNTGDPARRTYNLNLANWVPDLFMRRVEAGEPWSLFDPK 373
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
L D +G F+ Y+ E +G A + AR L+ ++ + ETG +M FKD+CNR
Sbjct: 374 AVPHLTDLFGAAFDAAYTDAEAKGLAVKSVPARDLYARMMKTLAETGNGWMTFKDACNRA 433
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
NQ + + SSNLCTEIVE +S ETAVCNL S+ L R+V G
Sbjct: 434 CNQTAEPGAVVHSSNLCTEIVEVTSAGETAVCNLGSVNLARHVTRDG------------- 480
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
FDF LAE + L++++DVN YP SN R RP+G+G+ GL D F
Sbjct: 481 -------FDFAALAETVRTAVRFLDRVVDVNFYPTPEAAASNARWRPVGLGVMGLQDVFF 533
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L LPF++P A++L++ I E IYYHAL S ELA GP+ ++ + + G+LQ D+W +
Sbjct: 534 KLKLPFDAPAARELSRRIQEEIYYHALATSCELAAARGPHPSFASTRAAAGVLQFDLWGV 593
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
P+D W++LRE + G+RNSLLVA PTA+ + I+G EC EP SN++ R LSGE
Sbjct: 594 EPTDPARWAALRERVRTTGLRNSLLVAIAPTATIASIVGAYECVEPQVSNLFKRETLSGE 653
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+ DL LGLW+ A++TKI +GSV +SE+P L+A+Y+T WE+ Q+ L+D
Sbjct: 654 FLQVNRYLVDDLKALGLWTDAVRTKIKLADGSVQSLSELPAGLRAVYRTAWEVPQRGLID 713
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
MAA+RG +IDQSQSLN+ +E P GK++S++ +AW KG+KT YYLR+R A K TV
Sbjct: 714 MAAERGPFIDQSQSLNLFLESPTIGKMSSMYMHAWKKGLKT-TYYLRSRPATAIAKTTVT 772
Query: 773 TSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
+ A+ + V CSL+N C AC
Sbjct: 773 PTA------------APADTSAVSCSLENPGACEAC 796
>gi|356927904|gb|AET42694.1| ribonucleoside diphosphate reductase [Emiliania huxleyi virus 202]
Length = 491
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/490 (62%), Positives = 378/490 (77%), Gaps = 20/490 (4%)
Query: 285 YVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRD 344
++ GGGKRKGAFA+YLEP HADIFEFL+LR+N GKEE RARDLFYALW+ D FM+RV
Sbjct: 12 FIVIGGGKRKGAFAMYLEPHHADIFEFLELRRNTGKEELRARDLFYALWISDHFMQRVEA 71
Query: 345 DGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPY 404
WSLFCP + GLAD WG ++ LY +YE +G+A+ I A+KLWF I++SQIETGTPY
Sbjct: 72 GKDWSLFCPHECPGLADVWGDDYVKLYEKYESDGKARKTIPAQKLWFAIMDSQIETGTPY 131
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
ML+KDSCNRKSNQQ+LGTI+ SNLCTEI+E+++ +ETAVCNLASIALP +V++
Sbjct: 132 MLYKDSCNRKSNQQHLGTIQQSNLCTEIIEYTASDETAVCNLASIALPIFVKD------- 184
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
GS FD + L +VT T NL+K+ID N+YPI RSN+RHRPIG+G+
Sbjct: 185 ------GS-------FDHQELYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGV 231
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
QGLAD F++L + F+S EA+ LNK+IFET+Y+ A+ AS +LA G Y TY GSP+SKG+
Sbjct: 232 QGLADVFMMLKMAFDSIEARVLNKEIFETMYFAAMTASCDLAKTKGKYPTYEGSPLSKGV 291
Query: 585 LQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
Q DMWN+TPSDRWDW +LR I ++G RNSLL++PMPTAST+QILGNNEC EP+TSN+Y
Sbjct: 292 FQFDMWNVTPSDRWDWDTLRGNIKEHGARNSLLISPMPTASTAQILGNNECMEPFTSNLY 351
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
+RRVLSGEF VVN+HL+KDL+ELGLW+ +K II NGSV I PE+LK IYKTVWE
Sbjct: 352 SRRVLSGEFAVVNRHLVKDLSELGLWNDKMKNYIIAANGSVQNIPGFPEDLKPIYKTVWE 411
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
I +TL+ MAADRG +I QSQS N+ M P KLTS+HFY W G+KTG YY+R+R AA
Sbjct: 412 ISMRTLIHMAADRGAFICQSQSFNVFMTAPTSAKLTSMHFYGWKSGLKTGSYYIRSRPAA 471
Query: 765 DAIKFTVDTS 774
DAIKFTVDTS
Sbjct: 472 DAIKFTVDTS 481
>gi|328784177|ref|XP_001121495.2| PREDICTED: ribonucleoside-diphosphate reductase large subunit [Apis
mellifera]
Length = 610
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/532 (59%), Positives = 388/532 (72%), Gaps = 52/532 (9%)
Query: 308 IFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEF 367
+FEFLDL+KN GKEE RAR+LFYALW+PDLFM+RV D+ W+L CP ++ GLAD WG EF
Sbjct: 102 VFEFLDLKKNTGKEENRARELFYALWIPDLFMKRVLDNDIWTLMCPHESPGLADVWGNEF 161
Query: 368 EHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSN 427
E LY++YE E R K I AR LW IL SQ+ETGTPYML+KD CNRKSN QN+GTIKSSN
Sbjct: 162 EILYTRYENEKRYKRQIQARDLWTAILISQVETGTPYMLYKDHCNRKSNHQNIGTIKSSN 221
Query: 428 LCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAE 487
LCTE+V++SSP+E AVCNLASIA+ +V P+ N+ FDF++L +
Sbjct: 222 LCTEVVQYSSPDEVAVCNLASIAVNMFVN----PI--------------NQTFDFQKLLK 263
Query: 488 VTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLN 547
VTKI+T NL+KIIDVN+YPI R+SN RHRPIGIGIQGLAD F+L+ PFES EAQ+LN
Sbjct: 264 VTKIVTCNLDKIIDVNYYPIPEARKSNFRHRPIGIGIQGLADAFLLMRYPFESEEAQKLN 323
Query: 548 KDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMI 607
IFET+YY AL+AS ELA + G YETY GSP+SKGILQ DMWN+ P++ WDW+ L++ I
Sbjct: 324 IQIFETLYYGALEASCELAEEKGTYETYEGSPVSKGILQYDMWNVIPTNLWDWTILKKKI 383
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTEL 667
+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIYTRRVLSGEF VVN HLL+DLTE
Sbjct: 384 AKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQVVNPHLLRDLTER 443
Query: 668 GLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSL 727
LW +K +II NGS+ I IP++LK +YKTVWEI QK ++ MAADRG +IDQSQSL
Sbjct: 444 DLWDEDMKNEIIANNGSIQDIERIPDDLKMLYKTVWEIPQKIILKMAADRGAFIDQSQSL 503
Query: 728 NIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN--------- 778
N+HM +P KLTS+HFY W G+KTGMYYLRT+ AA+A++FTVD S L N
Sbjct: 504 NVHMAKPTTEKLTSMHFYGWKMGLKTGMYYLRTKPAANALQFTVDKSKLRNTSNITSNQS 563
Query: 779 --------------------EKANRADNDVEANLAQVVCSLKNQEECMACGS 810
+ N+ D D+ + CS +N + CMACGS
Sbjct: 564 INSENDNNEELNNSSQNGWLQDQNKEDVDI-----VLACSRENGDACMACGS 610
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 72/95 (75%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
MYVIKRDGRKE V FDKIT+R+ KL Y L ++ DP + +V +G+Y GVTT +LD LA
Sbjct: 7 MYVIKRDGRKEDVHFDKITSRISKLCYNLDMDYIDPSAITFRVISGLYSGVTTVELDNLA 66
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFS 95
AETAA MT HPDYA+LA R+A+SNLHK T SFS
Sbjct: 67 AETAATMTTKHPDYAILAARIAISNLHKETTKSFS 101
>gi|405354038|ref|ZP_11023447.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Chondromyces apiculatus DSM 436]
gi|397092729|gb|EJJ23478.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 837
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/817 (42%), Positives = 493/817 (60%), Gaps = 42/817 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G E V +KI + + GL + D + VA K +G+Y G TT +LD L+
Sbjct: 53 MRVRKRNGGAETVDLNKIVRAVGRSCAGLPR--VDAMRVATKTISGLYDGATTRELDSLS 110
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAAA+ V P+Y L+ R+ + + K N SFS++I +G K L+
Sbjct: 111 IQTAAALIVEEPEYGRLSARLLATFIQKEVSNQDIHSFSQSIA---------AGHKHGLI 161
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRV 174
AD + + + NA L+ AI R+ F+YFG +T+ YLLK V+E PQ +RV
Sbjct: 162 ADRLLQFVQANARKLNAAIDPTRNDLFEYFGLRTVYDRYLLKNPQTREVLETPQEFFLRV 221
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + D+ + A++ Y L S + ++PTLFN+GT QLSSCFLL D ++ IY
Sbjct: 222 ASALSGDNVNEAIELYRLFSSLEYLPSSPTLFNSGTRHEQLSSCFLLDSPADELDAIYKK 281
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A++SK +GGIG++ H +RA GS I TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 282 YSDIAMLSKFSGGIGVAYHRVRARGSLIKSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 340
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHADI +FL+LR+N G + R +L A WVPDLFM+RV DG WSLF P
Sbjct: 341 GACCVYLETWHADIEDFLELRENTGDDARRTHNLNLANWVPDLFMKRVEADGDWSLFDPK 400
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
D +G FE Y++ E +G A + AR L+ ++ S +TG +M FKD NRK
Sbjct: 401 TVPHFTDLYGDAFEQAYAKAEADGLAMRKVKARDLYARMMKSLAQTGNGWMTFKDISNRK 460
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ ++ I SNLCTEI+E +S ETAVCNL S+ L R V+
Sbjct: 461 SNQTGKDGNVIHLSNLCTEILEVTSQGETAVCNLGSLNLGRMVK---------------- 504
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D K FDFERL ++ L+++ID+N+YPI T SN R RP+G+G+ GL D F
Sbjct: 505 -DGK---FDFERLRANAQLAMRQLDRVIDLNYYPIPTAASSNQRWRPVGLGLMGLQDVFF 560
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L L F++PEA++L+K I E IY+ AL S E+A + G + ++ + +KG LQ D W +
Sbjct: 561 QLKLAFDAPEARELSKQISEEIYFAALTTSCEMAEQYGAHTSFPETRAAKGELQFDHWGV 620
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
P+D W +LR+ I K+G+RNSL++A PTA+ + I+G EC EP SN++ R LSG+
Sbjct: 621 VPTDMARWDALRQRIMKHGLRNSLMIAIAPTATIASIVGCYECIEPQVSNLFKRETLSGD 680
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L++DL LGLW+ ++ +I GSV I+E+PE L+A+Y+T WE+ ++L+D
Sbjct: 681 FLQVNRYLVRDLQALGLWNENVRNRIKMAEGSVQDITELPENLRAVYRTAWELPMRSLLD 740
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
M ADRG +IDQSQSLN+ +E P+ GKL+S++FYAW KG+KT YYLR+R A K TV
Sbjct: 741 MGADRGAFIDQSQSLNLFVETPNIGKLSSMYFYAWQKGLKT-TYYLRSRPATRIAKATVG 799
Query: 773 TSVLNNEKANRADNDVEANLAQ-VVCSLKNQEECMAC 808
+ +A A+ V CSL+N E C AC
Sbjct: 800 AGGGASVAQAAPAPVAKATEAEAVACSLENPEACEAC 836
>gi|430741871|ref|YP_007201000.1| ribonucleoside-diphosphate reductase subunit alpha [Singulisphaera
acidiphila DSM 18658]
gi|430013591|gb|AGA25305.1| ribonucleoside-diphosphate reductase, alpha subunit [Singulisphaera
acidiphila DSM 18658]
Length = 801
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/816 (42%), Positives = 491/816 (60%), Gaps = 56/816 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KR+GR EPV +KI +++ S GL D + +A K G++ G TT +LD+L+
Sbjct: 33 MHVRKRNGRLEPVDVNKIVRAVRRTSGGLPS--VDIMRIAVKTIGGLFDGATTRELDQLS 90
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAA++ P+Y+ LA R+ + K N SFS+ + +G + L+
Sbjct: 91 IQTAASLIAEEPEYSQLAARLLDCYIAKEVMNQDIHSFSQAVS---------TGHRLGLI 141
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSR--VVERPQHMLMRV 174
A + + + +A L+ A F+YFG +T+ YLL+ + V+E P + +RV
Sbjct: 142 ATETAQQVAADARKLNAAAAASPRDKFEYFGLRTVYDRYLLRHPTTRDVIETPAYFFLRV 201
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ G+ ++ D AL + LM+ H + ++PTLFN+GTP+PQ+SSC+LL DS+E IYD
Sbjct: 202 ACGLSRNVVD-ALDLFELMASHRYMPSSPTLFNSGTPRPQMSSCYLLDSPADSLESIYDR 260
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A +SK AGGIGL+ H IR+ GSYI GTNG NG+VP L+ + + V+QGG +RK
Sbjct: 261 YADIAKLSKYAGGIGLAYHRIRSRGSYIQGTNGHGNGVVPWLKTMDSSVAAVNQGG-RRK 319
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHADI EFL+L+ N G E R +L A WVPDLFM+RV WSLF P
Sbjct: 320 GACCVYLESWHADIEEFLELKDNAGDEARRTYNLNLANWVPDLFMQRVEAGANWSLFDPK 379
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
L D +G F+ Y++ EE G A ++AR L+ ++ + ETG ++ FKD+CNRK
Sbjct: 380 TVPHLTDLFGEAFDVAYAEAEENGLAVKQVAARDLYARMMKTLAETGNGWLNFKDACNRK 439
Query: 415 SNQQNL--GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ + + SSNLCTEIVE +S ETAVCNL SI L ++V + G
Sbjct: 440 SNQTRVPGNVVHSSNLCTEIVEVTSAGETAVCNLGSINLVQHVDDDG------------- 486
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
FDFE LAE + L+ ++D+N YP + SN R RP+GIG+ GL D
Sbjct: 487 -------FDFEALAETVRTAVPFLDAVVDINFYPTPESATSNRRWRPVGIGLMGLQDVLF 539
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L LPF++PEA++L+ I E IY+HAL S +LA K GP+ ++ + ++G+LQ+D+W
Sbjct: 540 HLNLPFDAPEARRLSARIQEEIYFHALSVSCDLAEKLGPHPSFAETRAAEGVLQIDLWGW 599
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
WS LR+ I ++G+RNSLLVA PTA+ + I+G EC EP SN++ R LSGE
Sbjct: 600 EGGHDARWSDLRDRIRRHGLRNSLLVAIAPTATIASIVGAYECIEPQISNLFKRETLSGE 659
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+K+L GLW+ ++ +I GS+ I EIP EL+ +Y+TVWE+ ++L+D
Sbjct: 660 FLQVNRYLVKELKARGLWTEEIRNRIKLAEGSIQGIEEIPAELRRVYRTVWEVPMRSLID 719
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
MAADR +IDQSQSLN+ +E P GKL+S++ YAW +G+KT YYLR+R A K TV
Sbjct: 720 MAADRAPFIDQSQSLNLFIESPSIGKLSSMYMYAWKRGLKTS-YYLRSRPATGIAKTTVS 778
Query: 773 TSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
S +QV CSL+N E C +C
Sbjct: 779 LS--------------PGMPSQVACSLENPESCESC 800
>gi|442322489|ref|YP_007362510.1| ribonucleoside-diphosphate reductase [Myxococcus stipitatus DSM
14675]
gi|441490131|gb|AGC46826.1| ribonucleoside-diphosphate reductase [Myxococcus stipitatus DSM
14675]
Length = 833
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/820 (42%), Positives = 490/820 (59%), Gaps = 45/820 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G E V +KI + K GLS+ D + VA K +G+Y G TT +LD L+
Sbjct: 46 MRVRKRNGTAESVDLNKIVRAVGKSCVGLSR--VDVMRVATKTISGLYDGATTRELDSLS 103
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAAA+ V P+YA L+ R+ + + K N SFS+++ +G K L+
Sbjct: 104 IQTAAALIVEEPEYARLSARLLATFIQKEVSNQDIHSFSQSVA---------AGHKHGLI 154
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRV 174
AD + + + NA L+ AI R+ F+YFG +T+ YLLK V+E PQ +RV
Sbjct: 155 ADRLLQFVQANARKLNAAIDPTRNDLFEYFGLRTVYDRYLLKNPQTREVLETPQEFFLRV 214
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + D+ A++ Y L S + ++PTLFN+GT QLSSCFLL D ++ IY
Sbjct: 215 ACALSGDNAREAIELYRLFSSLEYLPSSPTLFNSGTRHEQLSSCFLLDSPADDLDAIYRK 274
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A++SK +GGIG+ H +RA GS I TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 275 YSDIAMLSKFSGGIGVGYHRVRARGSLIRSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 333
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHADI +FL+LR+N G E R +L A WVPDLFM+RV +G WSLF P
Sbjct: 334 GACCVYLESWHADIEDFLELRENTGDEARRTHNLNLANWVPDLFMKRVESEGDWSLFDPK 393
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
L D +G EFE Y + E G A + AR L+ ++ + +TG +M FKD NRK
Sbjct: 394 VVPHLTDLFGAEFEKAYVEAEASGLAMRKVKARDLYARMMKTLAQTGNGWMTFKDISNRK 453
Query: 415 SNQQNL--GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ L I SNLCTEI+E +S ETAVCNL S+ L R V
Sbjct: 454 SNQTGLPQNVIHLSNLCTEILEVTSQGETAVCNLGSLNLGRMVV---------------- 497
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D K FDFERL ++ + L+++ID+N+YPI T SN R RP+G+G+ GL D F
Sbjct: 498 -DGK---FDFERLRANAQLALKQLDRVIDLNYYPIPTAADSNRRWRPVGLGLMGLQDVFF 553
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L L F++PEA+ L+K I E IY+ AL S ELA + G + ++ + ++G Q W +
Sbjct: 554 QLKLAFDAPEARALSKKISEEIYFAALTTSCELAEQFGAHPSFPETRAAQGEFQFASWGV 613
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
TP D W +LR I K+G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 614 TPEDPARWDALRARIMKHGLRNSLMIAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 673
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L++DL LG+W+ +++ +I GS+ +++E+PE L+AIY+T WE+ ++L+D
Sbjct: 674 FLQVNRYLVRDLQALGMWNESVRNRIKLAEGSIQELTELPETLRAIYRTAWELPMRSLID 733
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
MAADRG +IDQSQSLN+ +E P+ GKL+S++FYAW KG+KT YYLR+R A K TV
Sbjct: 734 MAADRGAFIDQSQSLNLFVETPNIGKLSSMYFYAWQKGLKT-TYYLRSRPATRIAKATVS 792
Query: 773 ----TSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
T+ A A + V CSL+N E C AC
Sbjct: 793 GSGATATAPVTPAPVAAASTVTDAEAVACSLENPEACEAC 832
>gi|225873705|ref|YP_002755164.1| ribonucleoside-diphosphate reductase subunit alpha [Acidobacterium
capsulatum ATCC 51196]
gi|225791715|gb|ACO31805.1| ribonucleoside-diphosphate reductase, alpha subunit [Acidobacterium
capsulatum ATCC 51196]
Length = 792
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/821 (42%), Positives = 490/821 (59%), Gaps = 66/821 (8%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KR+G EPV +KI +++ S GLS+ D + VA K G+Y G TT +LD ++
Sbjct: 24 MHVRKRNGELEPVDVNKIVRAVQRCSAGLSQ--VDAIRVASKTIGGLYDGATTRELDAIS 81
Query: 61 AETAAAMTVNHPDYALLAGR---------VAVSNLHKITKNSFSETIKDMYNYYNKRSGK 111
+TAA++ P Y+ LA R VA NLH SFS++I+ Y + G
Sbjct: 82 IDTAASLIAEEPQYSKLAARLLLGTILKEVAGQNLH-----SFSQSIE-----YAHQEG- 130
Query: 112 KASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQH 169
+V E + +A L+ AI F++FG +T+ YLL+ + +V+E PQ+
Sbjct: 131 ---VVNAATAEFVRTHARKLNYAIDEQLSDRFEFFGLRTVYDRYLLRDPLSRKVIETPQY 187
Query: 170 MLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
+RV+ G+ A++ Y L++ H + ++PTLFN+GT PQ+SSC+L DS+E
Sbjct: 188 FFLRVACGL-AGTPHEAIEFYRLIASHDYMPSSPTLFNSGTKHPQMSSCYLHDSPSDSLE 246
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
IYDT K A++SK +GGIGL+ H +R+ GS I TNG SNGIVP L+ + + V+QG
Sbjct: 247 SIYDTYKDVALLSKFSGGIGLAFHRVRSEGSLIRATNGLSNGIVPWLRTLDSSVAAVNQG 306
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G KRKGA +YLEPWHAD+ +FL+LR+N G R +L A W+PDLFM RV +DG WS
Sbjct: 307 G-KRKGACCVYLEPWHADVEQFLELRENTGDLSRRTYNLNLANWIPDLFMRRVEEDGMWS 365
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD 409
LF P L D +G+EF+ Y + E E I AR L+ ++ S ETG +M FKD
Sbjct: 366 LFDPKVVPQLPDLYGVEFDAAYEKAEAEQLYARQIKARDLYARMMRSLAETGNGWMTFKD 425
Query: 410 SCNRKSNQQNL--GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVS 467
+CN K NQ + SNLCTEI E +S +ETAVCNL SI L R+V
Sbjct: 426 ACNLKCNQTGKPGNVVHLSNLCTEITEVTSRDETAVCNLGSINLARHV------------ 473
Query: 468 KLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGL 527
N FDFE+LAE ++ L+++ID+N+YP+ +N R RP+G+G+ GL
Sbjct: 474 --------ANGAFDFEKLAETVRVAVPMLDRVIDINYYPVHQAASANSRWRPVGLGLMGL 525
Query: 528 ADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQV 587
D F L +PF+SPEAQQL+ I E IYYHAL AS ELA K G + + + ++ G LQ
Sbjct: 526 QDVFFQLRMPFDSPEAQQLSTHIQEEIYYHALAASCELAEKQGAHPAFAETRLAAGQLQF 585
Query: 588 DMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRR 647
D+W + P+D W++LR I ++GVRNSLL+A PTA+ + I+G EC EP SN++ R
Sbjct: 586 DLWGVKPADEARWNTLRARIQQHGVRNSLLIAIAPTATIASIVGCYECTEPQVSNLFKRE 645
Query: 648 VLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQ 707
LSGEF+ VN++L+ DL E GLW+ L+ ++ GSV I IP++LK IY+TVWE+
Sbjct: 646 TLSGEFLQVNRYLVTDLKERGLWNEELRMRLKLGEGSVQAIDGIPDDLKQIYRTVWELPM 705
Query: 708 KTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAI 767
+ ++D+A +R +IDQSQSLN+ E P+ G+L+S++ YAW G+KT YYLR+R A
Sbjct: 706 RAIIDLARERSPFIDQSQSLNLFAESPNIGRLSSMYMYAWKSGLKT-TYYLRSRPATRIA 764
Query: 768 KFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
K TV ++ + A V CSL+N C AC
Sbjct: 765 KTTVASA--------------KNATAAVACSLENPGSCEAC 791
>gi|162452148|ref|YP_001614515.1| ribonucleoside-diphosphate reductase [Sorangium cellulosum So ce56]
gi|161162730|emb|CAN94035.1| Ribonucleoside-diphosphate reductase [Sorangium cellulosum So ce56]
Length = 838
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/824 (41%), Positives = 497/824 (60%), Gaps = 45/824 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G EPV +KI + + LS D + VA K +G+Y G TT +LD+L+
Sbjct: 43 MRVKKRNGSSEPVDVNKIVRAVSRSCAALSD--VDALRVATKTISGLYDGATTRELDQLS 100
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAA++ + P YA LA R+ + + K +N +FS+++ G++ L+
Sbjct: 101 IQTAASLIADEPQYAKLAARLLATYIDKEVRNQEIHAFSQSVA---------VGRRLGLI 151
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM-DSR-VVERPQHMLMRV 174
D ++ + +NA L+ AI RD + +YFG +TL YLLK ++R V+E PQ +R+
Sbjct: 152 NDRLHGFVAQNARKLNDAIEPARDHELEYFGLRTLYDRYLLKHPETRLVIETPQQFFLRI 211
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + + A++ Y L S + ++PT+FN+GT QLSSCFLL DD +E IY
Sbjct: 212 ACAL-SETAAQAVELYRLFSSLDYLPSSPTMFNSGTSHEQLSSCFLLDSPDDHLETIYQR 270
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A++SK +GGIGL+ H +R+ GS I TNG S+GIVP L+ + + V+QGG KRK
Sbjct: 271 YTDVAMLSKFSGGIGLAYHRVRSRGSLIRATNGHSSGIVPWLKTLDASVAAVNQGG-KRK 329
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLEPWHAD+ EFL LR N G E R +L A WVPDLFM+RV DG WSLF P
Sbjct: 330 GACCVYLEPWHADVEEFLSLRDNTGDEAARTHNLNLASWVPDLFMKRVEADGDWSLFDPK 389
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
DA L D +G EFE Y + E G AK + AR+L+ ++ + +TG +M FKD NR
Sbjct: 390 DARDLPDLYGEEFERRYVEAERAGLAKKTMKARELYARMMRTLAQTGNGWMTFKDKSNRA 449
Query: 415 SNQQNLG--TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
NQ L + SNLCTEI+E +S EE+AVCNL SI L R+ V+
Sbjct: 450 CNQTALPGRIVHLSNLCTEILEVTSNEESAVCNLGSINLARHT---ATLADGAVA----- 501
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
FDFE+LA + L+++ID+N+YPI +TRRSNLR RP+G+G+ GL D F
Sbjct: 502 -------FDFEKLARTVRTAVRQLDRVIDLNYYPIPSTRRSNLRWRPVGLGLMGLQDVFF 554
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
+ LPF++P A++L++ I E +YYHAL SA+LA + G + + + ++G LQ D W
Sbjct: 555 QMRLPFDAPAARELSRRISEEVYYHALSTSADLAAEKGRHPAFDETRAARGELQFDAWGA 614
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
P D W +LR + G+RNSLLVA PTA+ + I G EC EP SN++ R LSG+
Sbjct: 615 VPEDAARWEALRARVQAEGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 674
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ +N++L+ +L LG W+ A++ ++ GSV + E+PE+++A+++T WEI ++L+D
Sbjct: 675 FLQMNRYLVAELKRLGAWNDAVRARLKLAEGSVQGMDELPEQIRAVFRTAWEIPMRSLID 734
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
MAADRG +IDQSQSLN+ +E P G+L+S++F+AW KG+KT YYLR+R A K TV+
Sbjct: 735 MAADRGAFIDQSQSLNLFIENPTIGQLSSMYFHAWKKGLKT-TYYLRSRPATRIAKATVE 793
Query: 773 TS---VLNNEKANRADND-----VEANLAQVVCSLKNQEECMAC 808
++ A R + A V C+L+N E C AC
Sbjct: 794 APPDRTPGDDAAPRREGGWVPAPPAKAAADVACALENPEACEAC 837
>gi|444917550|ref|ZP_21237645.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Cystobacter fuscus DSM 2262]
gi|444710891|gb|ELW51852.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Cystobacter fuscus DSM 2262]
Length = 796
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/817 (42%), Positives = 495/817 (60%), Gaps = 49/817 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G E +KI + + GL + D + VA K AG+Y G +T +LD+L+
Sbjct: 19 MRVRKRNGTLEAADLNKIVRAISRCCDGLRQ--VDAIRVATKTIAGLYDGASTQELDQLS 76
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITK----NSFSETIKDMYNYYNKRSGKKASLV 116
+TAA++T+ P+YA LA R+ + + K +SFS++I + + LV
Sbjct: 77 IQTAASLTLEEPEYARLAARLLATYIDKELSGQEVHSFSQSIA---------AAHRLGLV 127
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSR--VVERPQHMLMRV 174
+ V +++ NA L+ +I R+ F+YFG +T+ YLLK + V+E PQH MR+
Sbjct: 128 NERVAQLVAANARKLNDSIDPTRNRLFEYFGLRTVYDRYLLKHPTTRAVLETPQHFFMRI 187
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+V + + AL+ Y S + ++PTLFN+GT QLSSCFLL +D + IY
Sbjct: 188 AVAL-GETVPEALELYRRFSLLEYVPSSPTLFNSGTRHEQLSSCFLLDSPEDELGSIYQR 246
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A++SK +GGIGL+ H IR+ GS I TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 247 YTDVAMLSKFSGGIGLAYHRIRSRGSLITSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 305
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHAD+ EFL+LR N G E R +L A WVPDLFM+RV DG WSLF P
Sbjct: 306 GAACVYLETWHADLEEFLELRDNTGDEARRTHNLNLANWVPDLFMKRVEADGAWSLFDPK 365
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
L D +G +FE Y + E +G A I AR+++ ++ + +TG +M FKD NR
Sbjct: 366 VVPHLTDLYGEDFERAYLEAEAKGLAAKSIKAREMYARMMRTLAQTGNGWMTFKDKSNRA 425
Query: 415 SNQQNLG--TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
NQ + SNLCTEI+E +S +ETAVCNL SI L R+ S
Sbjct: 426 CNQTARPGRVVHLSNLCTEILEVTSKDETAVCNLGSINLARHT----------------S 469
Query: 473 RDSKNRL-FDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTF 531
D++ ++ FD+E+LA+ + L+++ID+N+YPI T SN R RP+G+GI GL D F
Sbjct: 470 TDAQGKVTFDWEKLAQTVRTAVRQLDRVIDLNYYPIATAESSNQRWRPVGLGIMGLQDVF 529
Query: 532 ILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN 591
+ LPF++PEA+ L++ + E IY+HAL AS ELA + G + + + ++G LQ + W
Sbjct: 530 FQMRLPFDAPEARTLSRKVSEEIYFHALSASVELAAEHGAHPAFPETRAAQGELQFEAWG 589
Query: 592 ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSG 651
+TP D W +LR + + G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 590 VTPEDSARWEALRTRVKQTGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 649
Query: 652 EFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLV 711
+F+ VN++L+++L LG W+ ++T+I GS+ ISEIP E++AIY+T WE+ ++L+
Sbjct: 650 DFLQVNRYLVEELKALGKWNEEMRTRIKLAEGSIQGISEIPAEVRAIYRTAWELPMRSLI 709
Query: 712 DMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
DMAADRG +IDQSQSLN+ ME P+ G+L+S++ YAW KG+KT YYLR+R A K TV
Sbjct: 710 DMAADRGAFIDQSQSLNLFMESPNIGQLSSMYMYAWKKGLKT-TYYLRSRPATRIAKATV 768
Query: 772 DTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
+ A R + EA + CSL+N E C AC
Sbjct: 769 E--------APREEKPTEAQ--AIACSLENPEACEAC 795
>gi|408825289|ref|ZP_11210179.1| ribonucleoside-diphosphate reductase subunit alpha [Pseudomonas
geniculata N1]
Length = 800
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/813 (42%), Positives = 488/813 (60%), Gaps = 44/813 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G E V +KI +++ S GL DP+ VA + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGL--HAVDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS-GKKASLVADD 119
TAA + P+Y LA R+ + + K +++Y + S G + L+ D
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSG------QEIYAFSQSVSRGHEVGLINDR 137
Query: 120 VYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM--DSRVVERPQHMLMRVSVG 177
+ + NA L+ AI D +FDYFG +TL YLL+ +V+E PQ +R++
Sbjct: 138 LLNFVQTNARKLNDAIDISLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRIASA 197
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
+ +D +++ L Y M + ++PTLFN+GT QLSSCFLL DS+E IY
Sbjct: 198 LSEDVSET-LALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSKYGD 256
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
A +SK +GGIG+S +R+ GS I TNG SNGIVP L+ + + V+QGG KRKGA
Sbjct: 257 IAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRKGAA 315
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
+YLE WHADI +FL+LR N G E RA +L A WVPDLFM+RV D +WSLF P
Sbjct: 316 CVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPRVVP 375
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
D +G FE Y Q E +G+A ISARKL+ ++ + ETG +M FKD CNR SNQ
Sbjct: 376 EFTDLFGEAFEAAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRASNQ 435
Query: 418 --QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDS 475
+ I SNLCTEI+E +S +ETAVCNL SI L G+
Sbjct: 436 TLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GNHFD 476
Query: 476 KNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLG 535
++ FDFE+LAE ++ L+++ID+N YPIET RR+NLR RP+G+G GL D F
Sbjct: 477 EHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFFRKR 536
Query: 536 LPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS 595
LPF+S EA+ L+K I E IY+HAL+ S ELA + G + ++ + + G LQ D WN+ P
Sbjct: 537 LPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAASGELQFDAWNVVPE 596
Query: 596 DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
D W +LRE I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+F+
Sbjct: 597 DTARWDALRERIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGDFLQ 656
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VN++L+ +L +LGLW+ ++ I GS++ +++IPE L+ +Y+T WE+ ++L+DMAA
Sbjct: 657 VNRYLVNELKKLGLWTADMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLIDMAA 716
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
+RG +IDQS SLN+ ME P+ G ++S++ YAW +G+KT YYLR+R A K TV ++
Sbjct: 717 ERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVSSA- 774
Query: 776 LNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
A V + + CSL+N E C AC
Sbjct: 775 --------APAKVFSPDEAIACSLENPEACEAC 799
>gi|383454420|ref|YP_005368409.1| ribonucleoside-diphosphate reductase subunit alpha [Corallococcus
coralloides DSM 2259]
gi|380733635|gb|AFE09637.1| ribonucleoside-diphosphate reductase subunit alpha [Corallococcus
coralloides DSM 2259]
Length = 823
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/817 (43%), Positives = 485/817 (59%), Gaps = 42/817 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G EPV +KI + K GLS+ D + VA K +G+Y G TT +LD L+
Sbjct: 39 MRVKKRNGTAEPVDLNKIVRAVGKSCVGLSR--VDVMRVATKTISGLYDGATTRELDSLS 96
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAAA+ V P+YA L+ R+ + + K N SFS+++ +G K L+
Sbjct: 97 IQTAAALIVEEPEYARLSARLLSTFIQKEVSNQDIQSFSQSVA---------AGHKHGLI 147
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRV 174
AD + + NA L+ AI R+ F+YFG +T+ YLLK V+E PQ +RV
Sbjct: 148 ADRLLTFVQANARKLNAAIDPVRNDLFEYFGLRTVYDRYLLKNPQTREVIETPQDFFLRV 207
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + D+ A++ Y L S + ++PTLFN+GT QLSSCFLL D ++ IY
Sbjct: 208 ACALSGDNAREAIELYRLFSSLEYLPSSPTLFNSGTRHEQLSSCFLLDSPADELDAIYKK 267
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A++SK +GGIG+ H +RA GS I TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 268 YSDIAMLSKFSGGIGVGYHRVRARGSLIKSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 326
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHADI +FL+LR N G E RA +L A WVPDLFM RV D +WSLF P
Sbjct: 327 GACCVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMRRVEADQEWSLFDPK 386
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
L D +G F+ Y E +G+A + AR L+ ++ +TG +M FKD NRK
Sbjct: 387 TTPHLTDLFGDAFDKAYVAAEAQGQAVRKVKARDLYARMMKVLAQTGNGWMTFKDISNRK 446
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ Q I SNLCTEI+E +S ETAVCNL S+ L R V+
Sbjct: 447 SNQTGQPGNVIHLSNLCTEILEVTSQGETAVCNLGSLNLGRMVK---------------- 490
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D K FDF+ L + + L+++ID+N+YPI T SN R RP+G+G+ GL D F
Sbjct: 491 -DGK---FDFDLLRSNAMLALKQLDRVIDLNYYPIPTAADSNRRWRPVGLGLMGLQDVFF 546
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L LPF+S EA+ L+K I E IYY AL S++LA + G + ++ + +KG LQ D W I
Sbjct: 547 QLRLPFDSVEARNLSKKISEEIYYAALVTSSDLAEQFGAHPSFPETRAAKGELQFDSWGI 606
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
P D W +LR I K G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 607 VPEDTLRWDALRSRIMKVGLRNSLMIAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 666
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L++DL +LGLW+ + +I GSV ++E+PEEL+AIY+T WEI ++L+D
Sbjct: 667 FLQVNRYLVRDLQQLGLWNENTRNRIKLAEGSVQDLTELPEELRAIYRTAWEIPMRSLLD 726
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
M ADRG +IDQSQSLN+ +E P+ GKL+S++FYAW KG+KT YYLR+R A K TV
Sbjct: 727 MGADRGAFIDQSQSLNLFVETPNIGKLSSMYFYAWQKGLKT-TYYLRSRPATRIAKATVG 785
Query: 773 TSVLNNEKA-NRADNDVEANLAQVVCSLKNQEECMAC 808
A A V A V CSL+N E C AC
Sbjct: 786 QGGPTITAAPTPAPQTVTAEAEAVACSLENPEACEAC 822
>gi|389799152|ref|ZP_10202155.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
sp. 116-2]
gi|388443611|gb|EIL99753.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
sp. 116-2]
Length = 806
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/817 (42%), Positives = 484/817 (59%), Gaps = 53/817 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G +E V +KI + + + GL DP+ V K G+Y G TT +LD+L+
Sbjct: 33 MRVTKRNGGQEAVDVNKIVRAVTRSAEGL--HGVDPLRVTLKTIGGLYDGATTAELDQLS 90
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITK----NSFSETIKDMYNYYNKRSGKKASLV 116
AAA+T P+Y LA R+ + + K S+S++I G + L+
Sbjct: 91 IRIAAALTAEEPEYGQLAARLLGAYIDKEVSGQEIQSYSQSIA---------RGTELGLL 141
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSR--VVERPQHMLMRV 174
+ + + + N L+ AI F+YFG +T+ YLL+ R V+E PQH MR+
Sbjct: 142 NERLRDFVAANTRKLNDAIDPLASRHFEYFGLRTVYDRYLLRHPQRRLVIETPQHFFMRI 201
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + ++ L+ Y L+S + ++PTLFNAGT QLSSC+LL DS+E IYD
Sbjct: 202 ACALGGNEIGETLELYRLLSSLEYLASSPTLFNAGTAHEQLSSCYLLDSPRDSLESIYDK 261
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A +SK AGGIGL+ +R+ GS I GTNG SNG+VP L+ + + V+QGG KRK
Sbjct: 262 YADVAKLSKFAGGIGLAYSRVRSRGSLIRGTNGHSNGLVPWLKTLDASVAAVNQGG-KRK 320
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHADI +FL+LR N G + RA +L A W+PD FM RV +DG+WSLF P
Sbjct: 321 GAACVYLESWHADIKDFLELRDNTGDDARRAHNLNIANWIPDEFMRRVENDGEWSLFDPK 380
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
DSWG F+ Y + E +G A + AR+L+ ++ + +TG +M FKD CN
Sbjct: 381 VVPHFVDSWGEAFDAAYRKAEADGLAVKTVKARELYARMMRTLAQTGNGWMTFKDRCNAT 440
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ + I SNLCTEI+E SS ETAVCNL S+ L R+V +
Sbjct: 441 SNQTAKPGNVIHLSNLCTEILEVSSATETAVCNLGSVNLARHVVDGA------------- 487
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
FDF++LA +I LN++ID+N+YPI+T R +N++ RP+G+G+ GL D F
Sbjct: 488 -------FDFDQLAATVRIAVRQLNRVIDLNYYPIDTARTANMKWRPVGLGVMGLQDVFF 540
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-N 591
L LPF+S EA L+ I E IY+HAL S ELA DG + + S + G LQ D W N
Sbjct: 541 KLRLPFDSAEALALSTRIAEEIYFHALSQSCELAETDGAHPGFAESRAANGELQFDHWPN 600
Query: 592 ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSG 651
TP D W +LRE I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 601 ATPHDIARWDALRERIKQHGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 660
Query: 652 EFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLV 711
+F+ VN+HL +L LGLW+ ++ I GS+ I+ IP L+AIY+TVWE+ QK+L+
Sbjct: 661 DFLQVNRHLADELKTLGLWTPEIRDAIKLAEGSIQGIAAIPARLRAIYRTVWELPQKSLI 720
Query: 712 DMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
D+AA RG +IDQSQSLN+ ME P+ G+L+S++ YAW G+KT YYLR+R A K TV
Sbjct: 721 DLAASRGAWIDQSQSLNLFMENPNIGQLSSMYMYAWKSGIKT-TYYLRSRPATKIAKTTV 779
Query: 772 DTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
++V + E+AN A V CSL+N E C AC
Sbjct: 780 -SAVSDQERAN----------AAVFCSLENPEYCEAC 805
>gi|254521985|ref|ZP_05134040.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas sp. SKA14]
gi|219719576|gb|EED38101.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas sp. SKA14]
Length = 800
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/813 (42%), Positives = 488/813 (60%), Gaps = 44/813 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G E V +KI +++ S GL DP+ VA + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGL--HAVDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS-GKKASLVADD 119
TAA + P+Y LA R+ + + K +++Y + S G + L+ D
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSG------QEIYAFSQSVSRGHEVGLINDR 137
Query: 120 VYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM--DSRVVERPQHMLMRVSVG 177
+ + NA L+ AI D +FDYFG +TL YLL+ +V+E PQ +R++
Sbjct: 138 LLNFVQTNARKLNDAIDGALDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRIASA 197
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
+ +D +++ L Y M + ++PTLFN+GT QLSSCFLL DS+E IY
Sbjct: 198 LSEDVSET-LALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSKYGD 256
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
A +SK +GGIG+S +R+ GS I TNG SNGIVP L+ + + V+QGG KRKGA
Sbjct: 257 IAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRKGAA 315
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
+YLE WHAD+ +FL+LR N G E RA +L A WVPDLFM+RV D +WSLF P
Sbjct: 316 CVYLETWHADVEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPRVVP 375
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
D +G FE Y Q E +G+A ISARKL+ ++ + ETG +M FKD CNR SNQ
Sbjct: 376 EFTDLFGEAFEAAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRASNQ 435
Query: 418 --QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDS 475
+ I SNLCTEI+E +S +ETAVCNL SI L G+
Sbjct: 436 TLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GNHFD 476
Query: 476 KNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLG 535
++ FDFE+LAE ++ L+++ID+N YPIET RR+NLR RP+G+G GL D F
Sbjct: 477 EHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFFRKR 536
Query: 536 LPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS 595
LPF+S EA+ L+K I E IY+HAL+ S ELA + G + ++ + + G LQ D WN+ P
Sbjct: 537 LPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAASGELQFDAWNVVPE 596
Query: 596 DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
D W +LRE I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+F+
Sbjct: 597 DTARWDALRERIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGDFLQ 656
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VN++L+ +L +LGLW+ ++ I GS++ +++IPE L+ +Y+T WE+ ++L+DMAA
Sbjct: 657 VNRYLVNELKKLGLWTADMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLIDMAA 716
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
+RG +IDQS SLN+ ME P+ G ++S++ YAW +G+KT YYLR+R A K TV T+
Sbjct: 717 ERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVSTA- 774
Query: 776 LNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
A V + + CSL+N E C AC
Sbjct: 775 --------APAKVFSPDEAIACSLENPEACEAC 799
>gi|194363984|ref|YP_002026594.1| ribonucleoside-diphosphate reductase subunit alpha
[Stenotrophomonas maltophilia R551-3]
gi|194346788|gb|ACF49911.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas maltophilia R551-3]
Length = 803
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/816 (42%), Positives = 482/816 (59%), Gaps = 47/816 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G E V +KI +++ S GL DP+ VA + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGL--HAVDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
TAA + P+Y LA R+ + + K +FS+++ G + L+
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVG---------RGHEVGLI 134
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM--DSRVVERPQHMLMRV 174
D + + NA L+ AI D +FDYFG +TL YLL+ +V+E PQ +R+
Sbjct: 135 NDRLLNFVQTNARKLNDAIDMSLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 194
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + +D AL Y M + ++PTLFN+GT QLSSCFLL DS+E IY
Sbjct: 195 ASAL-SEDVPEALALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 253
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A +SK +GGIG+S +R+ GS I TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 254 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 312
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHAD+ +FL+LR N G E RA +L A W+PDLFM+RV D +WSLF P
Sbjct: 313 GAACVYLETWHADVEDFLELRDNTGDESRRAHNLNLANWIPDLFMKRVEADQEWSLFDPR 372
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
D +G FE Y Q E +G+A ISARKL+ ++ + ETG +M FKD CNR
Sbjct: 373 VVPEFTDLFGEAFEAAYLQAEAQGKANRTISARKLYSRMMRTLAETGNGWMTFKDKCNRA 432
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ + I SNLCTEI+E +S EETAVCNL SI L G+
Sbjct: 433 SNQTLRAGNVIHLSNLCTEILEVTSAEETAVCNLGSINL-------------------GN 473
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
N FDF++LA+ ++ L+++ID+N YPIE+ RR NLR RP+G+G GL D F
Sbjct: 474 HFDGNGEFDFDKLADTVRLAVRQLDRVIDLNFYPIESARRGNLRWRPVGLGCMGLQDVFF 533
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
LPF+ EA+ L+K I ETIY+HAL+ S ELA + G + ++ + + G LQ D WN+
Sbjct: 534 RKRLPFDGAEARALSKKIAETIYFHALETSVELAQERGKHPSFADTRAASGELQFDAWNV 593
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
P D W SLRE I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 594 VPEDAERWDSLRERIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 653
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+ +L +LG W+ ++ I GS+ I++IPE L+ +Y+T WE+ ++L+D
Sbjct: 654 FLQVNRYLVNELKKLGHWTPEMRDAIKLAEGSIQGITQIPETLRHVYRTAWELPMRSLID 713
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
MAADRG +IDQS SLN+ ME P+ G ++S++ YAW +G+KT YYLR+R A K TV
Sbjct: 714 MAADRGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTV- 771
Query: 773 TSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
+ A A V + + CSL+N E C AC
Sbjct: 772 -----SHAAGAAPEKVFSPEEAIACSLENPEACEAC 802
>gi|108757444|ref|YP_633212.1| ribonucleoside-diphosphate reductase subunit alpha [Myxococcus
xanthus DK 1622]
gi|108461324|gb|ABF86509.1| ribonucleoside-diphosphate reductase, alpha subunit [Myxococcus
xanthus DK 1622]
Length = 785
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/817 (42%), Positives = 488/817 (59%), Gaps = 42/817 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G E V +KI + + GL + D + VA K +G+Y G TT +LD L+
Sbjct: 1 MRVRKRNGGTETVDLNKIVRAVGRSCVGLPR--VDAMRVATKTISGLYDGATTRELDSLS 58
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAAA+ V P+Y L+ R+ + + K N SFS+++ +G K L+
Sbjct: 59 IQTAAALIVEEPEYGRLSARLLATFIQKEVSNQDIHSFSQSVA---------AGHKHGLI 109
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRV 174
AD + + + NA L+ AI R+ F+YFG +T+ YLLK V+E PQ +RV
Sbjct: 110 ADRLLQFVQANARKLNAAIDPSRNDLFEYFGLRTVYDRYLLKNPQTREVLETPQEFFLRV 169
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + D+ + A++ Y L S + ++PTLFN+GT QLSSCFLL D ++ IY
Sbjct: 170 ASALSGDNVNEAIELYRLFSSLEYLPSSPTLFNSGTRHEQLSSCFLLDSPADELDAIYKK 229
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A++SK +GGIG++ H +RA GS I TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 230 YSDIAMLSKFSGGIGVAYHRVRARGSLIKSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 288
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHADI +FL+LR+N G + R +L A WVPDLFM+RV DG WSLF P
Sbjct: 289 GACCVYLETWHADIEDFLELRENTGDDARRTHNLNLANWVPDLFMKRVEADGDWSLFDPK 348
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
D +G FE Y++ E +G A + AR L+ ++ S +TG +M FKD NRK
Sbjct: 349 SVPHFTDLYGDAFEQAYAKAEADGLAMRKVKARDLYARMMKSLAQTGNGWMTFKDISNRK 408
Query: 415 SNQQNLG--TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ I SNLCTEI+E +S ETAVCNL S+ L R +
Sbjct: 409 SNQTGKAGNVIHLSNLCTEILEVTSQGETAVCNLGSLNLSRMLV---------------- 452
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D K FDFERL ++ L+++ID+N+YPI T SN R RP+G+G+ GL D F
Sbjct: 453 -DGK---FDFERLRANAQLAMRQLDRVIDLNYYPIPTAASSNKRWRPVGLGLMGLQDVFF 508
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L L F+S EA+ L+K I E IY+ AL S ELA + G +E++ + +KG LQ D W +
Sbjct: 509 QLKLAFDSAEARALSKKISEEIYFAALTTSCELAEQYGAHESFAETRAAKGELQFDHWGV 568
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
P D W +LR+ I K+G+RNSL++A PTA+ + I+G EC EP SN++ R LSG+
Sbjct: 569 VPEDTARWDALRQRIMKHGLRNSLMIAIAPTATIASIVGCYECIEPQVSNLFKRETLSGD 628
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L++DL LGLW+ ++ +I GSV I+E+PE L+A+Y+T WE+ ++L+D
Sbjct: 629 FLQVNRYLVRDLQALGLWNENIRNRIKMAEGSVQDITELPENLRAVYRTAWELPMRSLLD 688
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
M ADRG +IDQSQSLN+ +E P+ GKL+S++FYAW KG+KT YYLR+R A K TV
Sbjct: 689 MGADRGAFIDQSQSLNLFVETPNIGKLSSMYFYAWQKGLKT-TYYLRSRPATRIAKATVG 747
Query: 773 TSVLNNEKANRADNDVEANLAQ-VVCSLKNQEECMAC 808
+ +A A+ V CSL+N E C AC
Sbjct: 748 AGGGASVAQAAPAPVAKATEAEAVACSLENPEACEAC 784
>gi|424666639|ref|ZP_18103665.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas maltophilia Ab55555]
gi|401070085|gb|EJP78603.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas maltophilia Ab55555]
Length = 800
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/813 (42%), Positives = 486/813 (59%), Gaps = 44/813 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G E V +KI +++ S GL DP+ VA + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGL--HAVDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS-GKKASLVADD 119
TAA + P+Y LA R+ + + K +++Y + S G + L+ D
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSG------QEIYAFSQSVSRGHEVGLINDR 137
Query: 120 VYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM--DSRVVERPQHMLMRVSVG 177
+ + NA L+ AI D +FDYFG +TL YLL+ +V+E PQ +R++
Sbjct: 138 LLNFVQTNARKLNDAIDISLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRIASA 197
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
+ +D +++ L Y M + ++PTLFN+GT QLSSCFLL DS+E IY
Sbjct: 198 LSEDVSET-LALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSKYGD 256
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
A +SK +GGIG+S +R+ GS I TNG SNGIVP L+ + + V+QGG KRKGA
Sbjct: 257 IAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRKGAA 315
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
+YLE WHADI +FL+LR N G E RA +L A WVPDLFM+RV D +WSLF P
Sbjct: 316 CVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPRVVP 375
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
D +G FE Y Q E +G+A ISARKL+ ++ + ETG +M FKD CNR SNQ
Sbjct: 376 EFTDLFGEAFEAAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRASNQ 435
Query: 418 --QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDS 475
+ I SNLCTEI+E +S +ETAVCNL SI L G+
Sbjct: 436 TLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GNHFD 476
Query: 476 KNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLG 535
++ FDFE+LAE ++ L+++ID+N YPIET RR+NLR RP+G+G GL D F
Sbjct: 477 EHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFFRKR 536
Query: 536 LPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS 595
LPF+S EA+ L+K I E IY+HAL+ S ELA + G + ++ + + G LQ D WN+ P
Sbjct: 537 LPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAASGELQFDAWNVVPE 596
Query: 596 DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
D W +LR I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+F+
Sbjct: 597 DTARWDALRARIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGDFLQ 656
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VN++L+ +L +LGLW+ ++ I GS++ +++IPE L+ +Y+T WE+ ++L+DMAA
Sbjct: 657 VNRYLVNELKKLGLWTPEMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLIDMAA 716
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
+RG +IDQS SLN+ ME P+ G ++S++ YAW +G+KT YYLR+R A K TV +
Sbjct: 717 ERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVSAA- 774
Query: 776 LNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
A V + + CSL+N E C AC
Sbjct: 775 --------APAKVFSPDEAIACSLENPEACEAC 799
>gi|190572322|ref|YP_001970167.1| ribonucleoside-diphosphate reductase large subunit
[Stenotrophomonas maltophilia K279a]
gi|190010244|emb|CAQ43852.1| putative ribonucleoside-diphosphate reductase large subunit
[Stenotrophomonas maltophilia K279a]
Length = 775
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/813 (42%), Positives = 486/813 (59%), Gaps = 44/813 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G E V +KI +++ S GL DP+ VA + +G+Y G TT +LDEL+
Sbjct: 1 MSVTKRNGTTELVDLNKIVRAVQRSSEGL--HAVDPMRVATRTISGLYNGATTRELDELS 58
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS-GKKASLVADD 119
TAA + P+Y LA R+ + + K +++Y + S G + L+ D
Sbjct: 59 IRTAALLIGEEPEYGRLAARLLANYIAKEVSG------QEIYAFSQSVSRGHEVGLINDR 112
Query: 120 VYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM--DSRVVERPQHMLMRVSVG 177
+ + NA L+ AI D +FDYFG +TL YLL+ +V+E PQ +R++
Sbjct: 113 LLNFVQTNARKLNDAIDISLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRIASA 172
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
+ +D +++ L Y M + ++PTLFN+GT QLSSCFLL DS+E IY
Sbjct: 173 LSEDVSET-LALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSKYGD 231
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
A +SK +GGIG+S +R+ GS I TNG SNGIVP L+ + + V+QGG KRKGA
Sbjct: 232 IAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRKGAA 290
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
+YLE WHADI +FL+LR N G E RA +L A WVPDLFM+RV D +WSLF P
Sbjct: 291 CVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPRVVP 350
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
D +G FE Y Q E +G+A ISARKL+ ++ + ETG +M FKD CNR SNQ
Sbjct: 351 EFTDLFGEAFEAAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRASNQ 410
Query: 418 --QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDS 475
+ I SNLCTEI+E +S +ETAVCNL SI L G+
Sbjct: 411 TLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GNHFD 451
Query: 476 KNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLG 535
++ FDFE+LAE ++ L+++ID+N YPIET RR+NLR RP+G+G GL D F
Sbjct: 452 EHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFFRKR 511
Query: 536 LPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS 595
LPF+S EA+ L+K I E IY+HAL+ S ELA + G + ++ + + G LQ D WN+ P
Sbjct: 512 LPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAASGELQFDAWNVVPE 571
Query: 596 DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
D W +LR I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+F+
Sbjct: 572 DTARWDALRSRIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGDFLQ 631
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VN++L+ +L +LGLW+ ++ I GS++ +++IPE L+ +Y+T WE+ ++L+DMAA
Sbjct: 632 VNRYLVNELKKLGLWTPEMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLIDMAA 691
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
+RG +IDQS SLN+ ME P+ G ++S++ YAW +G+KT YYLR+R A K TV +
Sbjct: 692 ERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVSAA- 749
Query: 776 LNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
A V + + CSL+N E C AC
Sbjct: 750 --------APAKVFSPDEAIACSLENPEACEAC 774
>gi|386716673|ref|YP_006182999.1| ribonucleotide reductase subunit alpha [Stenotrophomonas
maltophilia D457]
gi|384076235|emb|CCH10816.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Stenotrophomonas maltophilia D457]
Length = 800
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/813 (42%), Positives = 486/813 (59%), Gaps = 44/813 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G E V +KI +++ S GL DP+ VA + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGL--HAVDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS-GKKASLVADD 119
TAA + P+Y LA R+ + + K +++Y + S G + L+ D
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSG------QEIYAFSQSVSRGHEVGLINDR 137
Query: 120 VYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM--DSRVVERPQHMLMRVSVG 177
+ + NA L+ AI D +FDYFG +TL YLL+ +V+E PQ +R++
Sbjct: 138 LLNFVQTNARKLNDAIDISLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRIASA 197
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
+ +D +++ L Y M + ++PTLFN+GT QLSSCFLL DS+E IY
Sbjct: 198 LSEDVSET-LALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSKYGD 256
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
A +SK +GGIG+S +R+ GS I TNG SNGIVP L+ + + V+QGG KRKGA
Sbjct: 257 IAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRKGAA 315
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
+YLE WHADI +FL+LR N G E RA +L A WVPDLFM+RV D +WSLF P
Sbjct: 316 CVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPRVVP 375
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
D +G FE Y Q E +G+A ISARKL+ ++ + ETG +M FKD CNR SNQ
Sbjct: 376 EFTDLFGEAFEQAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRASNQ 435
Query: 418 --QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDS 475
+ I SNLCTEI+E +S +ETAVCNL SI L G+
Sbjct: 436 TLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GNHFD 476
Query: 476 KNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLG 535
++ FDFE+LAE ++ L+++ID+N YPIET RR+NLR RP+G+G GL D F
Sbjct: 477 EHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFFRKR 536
Query: 536 LPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS 595
LPF+S EA+ L+K I E IY+HAL+ S ELA + G + ++ + + G LQ D WN+ P
Sbjct: 537 LPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAAGGELQFDAWNVVPE 596
Query: 596 DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
D W +LR I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+F+
Sbjct: 597 DTARWDALRARIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGDFLQ 656
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VN++L+ +L +LGLW+ ++ I GS++ +++IPE L+ +Y+T WE+ ++L+DMAA
Sbjct: 657 VNRYLVNELKKLGLWTADMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLIDMAA 716
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
+RG +IDQS SLN+ ME P+ G ++S++ YAW +G+KT YYLR+R A K TV +
Sbjct: 717 ERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVSAA- 774
Query: 776 LNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
A V + + CSL+N E C AC
Sbjct: 775 --------APAKVFSPDEAIACSLENPEACEAC 799
>gi|456737525|gb|EMF62220.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Stenotrophomonas maltophilia EPM1]
Length = 800
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/813 (42%), Positives = 486/813 (59%), Gaps = 44/813 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G E V +KI +++ S GL DP+ VA + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGL--HAVDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS-GKKASLVADD 119
TAA + P+Y LA R+ + + K +++Y + S G + L+ D
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSG------QEIYAFSQSVSRGHEVGLINDR 137
Query: 120 VYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM--DSRVVERPQHMLMRVSVG 177
+ + NA L+ AI D +FDYFG +TL YLL+ +V+E PQ +R++
Sbjct: 138 LLNFVQTNARKLNDAIDISLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRIASA 197
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
+ +D +++ L Y M + ++PTLFN+GT QLSSCFLL DS+E IY
Sbjct: 198 LSEDVSET-LALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSKYGD 256
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
A +SK +GGIG+S +R+ GS I TNG SNGIVP L+ + + V+QGG KRKGA
Sbjct: 257 IAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRKGAA 315
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
+YLE WHADI +FL+LR N G E RA +L A WVPDLFM+RV D +WSLF P
Sbjct: 316 CVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPRVVP 375
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
D +G FE Y Q E +G+A ISARKL+ ++ + ETG +M FKD CNR SNQ
Sbjct: 376 EFTDLFGEAFEAAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRASNQ 435
Query: 418 --QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDS 475
+ I SNLCTEI+E +S +ETAVCNL SI L G+
Sbjct: 436 TLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GNHFD 476
Query: 476 KNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLG 535
++ FDFE+LAE ++ L+++ID+N YPIET RR+NLR RP+G+G GL D F
Sbjct: 477 EHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFFRKR 536
Query: 536 LPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS 595
+PF+S EA+ L+K I E IY+HAL+ S ELA + G + ++ + + G LQ D WN+ P
Sbjct: 537 MPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAASGELQFDAWNVVPE 596
Query: 596 DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
D W +LR I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+F+
Sbjct: 597 DTARWDALRSRIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGDFLQ 656
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VN++L+ +L +LGLW+ ++ I GS++ +++IPE L+ +Y+T WE+ ++L+DMAA
Sbjct: 657 VNRYLVNELKKLGLWTPEMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLIDMAA 716
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
+RG +IDQS SLN+ ME P+ G ++S++ YAW +G+KT YYLR+R A K TV +
Sbjct: 717 ERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVSAA- 774
Query: 776 LNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
A V + + CSL+N E C AC
Sbjct: 775 --------APAKVFSPDEAIACSLENPEACEAC 799
>gi|344205622|ref|YP_004790763.1| ribonucleoside-diphosphate reductase subunit alpha
[Stenotrophomonas maltophilia JV3]
gi|343776984|gb|AEM49537.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas maltophilia JV3]
Length = 800
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/813 (42%), Positives = 486/813 (59%), Gaps = 44/813 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G E V +KI +++ S GL DP+ VA + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGL--HAVDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRS-GKKASLVADD 119
TAA + P+Y LA R+ + + K +++Y + S G + L+ D
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSG------QEIYAFSQSVSRGHEVGLINDR 137
Query: 120 VYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM--DSRVVERPQHMLMRVSVG 177
+ + NA L+ AI D +FDYFG +TL YLL+ +V+E PQ +R++
Sbjct: 138 LLNFVQTNARKLNDAIDGALDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRIASA 197
Query: 178 IHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
+ +D +++ L Y M + ++PTLFN+GT QLSSCFLL DS+E IY
Sbjct: 198 LSEDVSET-LALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSKYGD 256
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
A +SK +GGIG+S +R+ GS I TNG SNGIVP L+ + + V+QGG KRKGA
Sbjct: 257 IAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRKGAA 315
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
+YLE WHADI +FL+LR N G E RA +L A WVPDLFM+RV D +WSLF P
Sbjct: 316 CVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPRVVP 375
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ 417
D +G FE Y Q E +G+A ISARKL+ ++ + ETG +M FKD CNR SNQ
Sbjct: 376 EFTDLFGEAFEQAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRASNQ 435
Query: 418 --QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDS 475
+ I SNLCTEI+E +S +ETAVCNL SI L G+
Sbjct: 436 TLRAGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GNHFD 476
Query: 476 KNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLG 535
++ FDFE+LAE ++ L+++ID+N YPIET RR+NLR RP+G+G GL D F
Sbjct: 477 EHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFFRKR 536
Query: 536 LPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPS 595
LPF+S EA+ L+K I E IY+HAL+ S ELA + G + ++ + + G LQ D WN+ P
Sbjct: 537 LPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAAGGELQFDAWNVVPE 596
Query: 596 DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIV 655
D W +LR I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+F+
Sbjct: 597 DTARWDALRARIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGDFLQ 656
Query: 656 VNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAA 715
VN++L+ +L +LGLW+ ++ I GS++ +++IPE L+ +Y+T WE+ ++L+DMAA
Sbjct: 657 VNRYLVNELKKLGLWTPEMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLIDMAA 716
Query: 716 DRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV 775
+RG +IDQS SLN+ ME P+ G ++S++ YAW +G+KT YYLR+R A K TV +
Sbjct: 717 ERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVSAA- 774
Query: 776 LNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
A V + + CSL+N E C AC
Sbjct: 775 --------APAKVFSPDEAIACSLENPEACEAC 799
>gi|426403938|ref|YP_007022909.1| ribonucleoside-diphosphate reductase subunit alpha [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425860606|gb|AFY01642.1| ribonucleoside-diphosphate reductase alpha chain [Bdellovibrio
bacteriovorus str. Tiberius]
Length = 821
Score = 639 bits (1649), Expect = e-180, Method: Compositional matrix adjust.
Identities = 343/823 (41%), Positives = 497/823 (60%), Gaps = 46/823 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KRDG EPV KI R+ K GL++ DP+ VA K +G+Y G +T +LD L
Sbjct: 29 MRVKKRDGTLEPVDVTKIVERVTKNCQGLTQ--VDPLRVATKAISGLYDGASTKELDNLC 86
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
+TA+ + P+Y+ LA R+ + + + ++ ++ D ++ G +A L+A+
Sbjct: 87 IQTASLLIGEDPEYSRLAARLLSTYIDEEVRSQKIQSFADSVSF-----GFQAGLLAEST 141
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS--RVVERPQHMLMRVSVGI 178
Y+ + N A L AI R F+YFG +T+ YLLK + +V E PQ+ MRV+ G+
Sbjct: 142 YKFVETNKAALCAAIEPYRTDRFEYFGLRTVYDRYLLKNPTTRQVFETPQYFFMRVACGL 201
Query: 179 HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
+ + A++ Y L+S H + +TPTLFN+GT +PQ+SSC+LL D + IY
Sbjct: 202 AQS-VEEAIEFYRLISSHDYMPSTPTLFNSGTMRPQMSSCYLLDSPSDDLTAIYQKYTDI 260
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A++SK AGGIG++ +R+ GS I GTNG SNGI+P L+ + + V+QGG KRKGA
Sbjct: 261 ALLSKFAGGIGVAYSRVRSRGSLIKGTNGHSNGIIPWLKTMDSSVAAVNQGG-KRKGAAC 319
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
+YLE WH DI EFL+LR N G E RA +L A WVPDLFM+RV D WSLF P
Sbjct: 320 VYLETWHGDIEEFLELRDNTGDEAKRAHNLNLANWVPDLFMKRVEADAMWSLFDPKVVPH 379
Query: 359 LADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQ 418
D++G EFE Y++ EE+ + AR L+ ++ + +TG +M FKD N K+NQ
Sbjct: 380 FVDTYGEEFEKAYTEAEEKKLYIKQLKARDLYSRMMKTLAQTGNGWMTFKDHANLKANQT 439
Query: 419 NLG--TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSK 476
I SNLCTEI+E +S +ETAVCNL S+ L R+V +
Sbjct: 440 GEAGNVIHLSNLCTEILEVTSDKETAVCNLGSVNLSRHV--------------------E 479
Query: 477 NRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGL 536
N F+FE+LA + + L++++D+N YPI T + SN + RP+G+G+ GL D L+ L
Sbjct: 480 NGQFNFEKLARSVRTAVKYLDRVVDINFYPIGTAQDSNHKWRPVGLGVMGLQDALFLMKL 539
Query: 537 PFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD 596
PF+S A+ L+ + E IYY+AL S ELA K GP+ Y + +KG+LQ D+W +TPS
Sbjct: 540 PFDSAAARDLSARVQEEIYYNALVTSCELAEKHGPHGAYEQTKAAKGLLQYDLWGVTPSQ 599
Query: 597 RWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVV 656
+ L+E I K+G+RNSL++A PTA+ + I+G E EP SN++ R LSGEF+ +
Sbjct: 600 PERFEKLKEKIKKHGLRNSLMIAIAPTATIASIVGCYEAIEPQVSNLFKRETLSGEFMQI 659
Query: 657 NKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAAD 716
NK+L+ DL +G+W+ ++ +I ++GS+ ++ IP ++K +Y+TVWEI K+LVDMAAD
Sbjct: 660 NKYLVGDLKAMGIWTEDVRNEIKLQDGSIQDVAMIPPQIKELYRTVWEIPMKSLVDMAAD 719
Query: 717 RGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
RG YIDQ+QSLN+ E P GKL+S++ YAW KG+KT YYLR+R A K TV S
Sbjct: 720 RGAYIDQAQSLNLFQESPTIGKLSSMYMYAWKKGVKT-TYYLRSRPATKIAKTTVKASS- 777
Query: 777 NNEKANRADNDVEANLAQ-----------VVCSLKNQEECMAC 808
N+ +++ ++A AQ + CSL+N E C AC
Sbjct: 778 NSANPTASESMMDAAPAQEAKKSYSDAEVIACSLENPEACEAC 820
>gi|389774174|ref|ZP_10192321.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
spathiphylli B39]
gi|388438589|gb|EIL95334.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
spathiphylli B39]
Length = 812
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 348/817 (42%), Positives = 482/817 (58%), Gaps = 53/817 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KR+G +E V +KI + + + GL DP+ VA K G+Y G TT +LD+L+
Sbjct: 39 MHVTKRNGGQEAVDVNKIVRAVTRSAEGL--HGVDPLRVALKTIGGLYDGATTAELDQLS 96
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITK----NSFSETIKDMYNYYNKRSGKKASLV 116
TAAA+T P+Y LA R+ + + K SFS++I G S++
Sbjct: 97 IRTAAALTAEEPEYGQLAARLLGAYIDKEVSGQEIQSFSQSIA---------RGASLSIL 147
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSR--VVERPQHMLMRV 174
D + + + NA L+ AI F+YFG +T+ YLL+ V+E PQH MR+
Sbjct: 148 NDRLRDFVAANARKLNDAIDPLATRRFEYFGLRTVYDRYLLRHPQTRLVIETPQHFFMRI 207
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + ++ L+ Y L+S + ++PTLFNAGT QLSSC+LL DS+E IYD
Sbjct: 208 ACALGGNEIGETLELYRLLSSLEYIASSPTLFNAGTCHEQLSSCYLLDSPVDSLESIYDK 267
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A +SK AGGIGL+ +R+ GS I GTNG SNG++P L+ + + V+QGG KRK
Sbjct: 268 YADVAKLSKFAGGIGLAYSRVRSRGSLIRGTNGHSNGLLPWLKTLDASVAAVNQGG-KRK 326
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHADI +FL+LR N G + RA +L A W+PD FM RV +DG WSLF P
Sbjct: 327 GAACVYLESWHADIEDFLELRDNTGDDARRAHNLNIANWIPDEFMRRVENDGDWSLFDPK 386
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
DSWG F+ Y + E +G A + AR+L+ ++ + +TG +M FKD CN
Sbjct: 387 VVPHFVDSWGEAFDAAYRKAEADGLAVKTVKARELYARMMRTLAQTGNGWMTFKDRCNAT 446
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ + I SNLCTEI+E SS +ETAVCNL S+ L R+V +
Sbjct: 447 SNQTAKTGNVIHLSNLCTEILEVSSVDETAVCNLGSVNLARHVTDGA------------- 493
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
FD+++LA + LN++ID+N+YPI T R +N++ RP+G+G+ GL D F
Sbjct: 494 -------FDYDQLAATVRTAVRQLNRVIDLNYYPIATARTANMKWRPVGLGVMGLQDVFF 546
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-N 591
L LPF+S EA L+ I E IY+HAL S ELA +G + + S + G LQ D W
Sbjct: 547 KLRLPFDSAEALALSTRIAEEIYFHALSQSCELARVEGAHPGFAESRAASGELQFDHWPQ 606
Query: 592 ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSG 651
TP D W +LRE I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 607 ATPHDDTRWHALREQIRQHGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 666
Query: 652 EFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLV 711
+F+ VN+HL +L LGLW+ ++ I GS+ I+ IPE L+AIY+TVWE+ QK L+
Sbjct: 667 DFLQVNRHLADELKALGLWTSDIRDAIKLAEGSIQGIAAIPERLRAIYRTVWELPQKALI 726
Query: 712 DMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
++AA RG YIDQSQSLN+ ME P+ G+L+S++ YAW G+KT YYLR+R A K TV
Sbjct: 727 ELAAARGAYIDQSQSLNLFMENPNIGQLSSMYMYAWKAGIKT-TYYLRSRPATKIAKTTV 785
Query: 772 DTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
+S+ + +A A V CSL+N E C AC
Sbjct: 786 -SSLPDQAQAT----------AAVFCSLENPEYCEAC 811
>gi|310823069|ref|YP_003955427.1| ribonucleoside-diphosphate reductase [Stigmatella aurantiaca
DW4/3-1]
gi|309396141|gb|ADO73600.1| Ribonucleoside-diphosphate reductase [Stigmatella aurantiaca
DW4/3-1]
Length = 841
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 354/838 (42%), Positives = 498/838 (59%), Gaps = 70/838 (8%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G EPV +KI + + GL++ D + V+ K +G+Y G TT +LD L+
Sbjct: 43 MRVRKRNGSSEPVDLNKIVRAVGRCCAGLTR--VDALRVSTKTISGLYDGATTRELDSLS 100
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAAA+ V P+YA L+ R+ + + K N SFS+++ +G K L+
Sbjct: 101 IQTAAALIVEEPEYARLSARLLDTFIQKEVSNQEIHSFSQSVA---------AGHKHGLI 151
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRV 174
AD + + + NA L+ A+ R+ F+YFG +T+ YLLK V+E PQ +RV
Sbjct: 152 ADRLLQFVQANARKLNAAVDASRNDLFEYFGLRTVYDRYLLKNPQTREVIETPQDFFLRV 211
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + D A++ Y L S + ++PTLFNAGT QLSSCFLL D +E IY
Sbjct: 212 ACAL-TDTAKDAIELYRLFSSLEYLPSSPTLFNAGTRHEQLSSCFLLDSPSDELESIYRK 270
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A++SK +GGIG++ H +RA GS I TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 271 YTDIAMLSKFSGGIGVAYHRVRARGSLIRSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 329
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHADI +FL+LR N G E R +L A WV DLFM RV D +WSLF P
Sbjct: 330 GACCVYLETWHADIEDFLELRDNTGDEARRTHNLNLANWVSDLFMRRVEADQEWSLFDPK 389
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
L D +G FE Y+ E +G A + AR L+ ++ + +TG +M FKD NRK
Sbjct: 390 TVPHLTDLYGEAFERAYAAAEAQGLAARKVKARDLYARMMKTLAQTGNGWMTFKDISNRK 449
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ ++ I SNLCTEI+E ++ ETAVCNL S+ L R +
Sbjct: 450 SNQTGKDGNVIHLSNLCTEILEVTNASETAVCNLGSLNLGRMLS---------------- 493
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D K FDFERL ++ L+++ID+N+YPI T SN R RP+G+G+ GL D F
Sbjct: 494 -DGK---FDFERLRVNVQLAIRQLDRVIDLNYYPIPTAAASNSRWRPVGLGLMGLQDVFF 549
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L +PF++PEA+ L+K I E IY+ AL S +LA + GP++ + + + G LQ D W +
Sbjct: 550 QLRMPFDAPEARALSKKISEEIYFSALTTSCDLAEQHGPHQAFSETRAAHGELQFDAWGV 609
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
P D W++LRE I K G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 610 VPEDTARWAALRERIQKFGLRNSLMIAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 669
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VNK+L+++L LGLW+ A+++K+ GSV ++E+P ELKAIY+T WE+ ++L+D
Sbjct: 670 FLQVNKYLVRELQALGLWNDAMRSKLKMSEGSVQDLTELPAELKAIYRTAWEVPMRSLID 729
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
MAADRG +IDQSQSLN+ +E P+ GK++S++FYAW KG+KT YY+R+R A K TVD
Sbjct: 730 MAADRGAFIDQSQSLNLFVEAPNIGKMSSMYFYAWQKGLKT-TYYMRSRPATRITKTTVD 788
Query: 773 TSVLNNEKANRADN----------------------DVEANLAQVVCSLKNQEECMAC 808
TS + + A+ A N + EA + CSL+N E C AC
Sbjct: 789 TS--HGQNASVAPNMPVASAAPAAPAPTVTAEPKYTEAEA----LACSLENPEMCEAC 840
>gi|115378662|ref|ZP_01465812.1| ribonucleoside-diphosphate reductase, alpha subunit [Stigmatella
aurantiaca DW4/3-1]
gi|115364328|gb|EAU63413.1| ribonucleoside-diphosphate reductase, alpha subunit [Stigmatella
aurantiaca DW4/3-1]
Length = 800
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 354/838 (42%), Positives = 498/838 (59%), Gaps = 70/838 (8%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G EPV +KI + + GL++ D + V+ K +G+Y G TT +LD L+
Sbjct: 2 MRVRKRNGSSEPVDLNKIVRAVGRCCAGLTR--VDALRVSTKTISGLYDGATTRELDSLS 59
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAAA+ V P+YA L+ R+ + + K N SFS+++ +G K L+
Sbjct: 60 IQTAAALIVEEPEYARLSARLLDTFIQKEVSNQEIHSFSQSVA---------AGHKHGLI 110
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRV 174
AD + + + NA L+ A+ R+ F+YFG +T+ YLLK V+E PQ +RV
Sbjct: 111 ADRLLQFVQANARKLNAAVDASRNDLFEYFGLRTVYDRYLLKNPQTREVIETPQDFFLRV 170
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + D A++ Y L S + ++PTLFNAGT QLSSCFLL D +E IY
Sbjct: 171 ACAL-TDTAKDAIELYRLFSSLEYLPSSPTLFNAGTRHEQLSSCFLLDSPSDELESIYRK 229
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A++SK +GGIG++ H +RA GS I TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 230 YTDIAMLSKFSGGIGVAYHRVRARGSLIRSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 288
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHADI +FL+LR N G E R +L A WV DLFM RV D +WSLF P
Sbjct: 289 GACCVYLETWHADIEDFLELRDNTGDEARRTHNLNLANWVSDLFMRRVEADQEWSLFDPK 348
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
L D +G FE Y+ E +G A + AR L+ ++ + +TG +M FKD NRK
Sbjct: 349 TVPHLTDLYGEAFERAYAAAEAQGLAARKVKARDLYARMMKTLAQTGNGWMTFKDISNRK 408
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ ++ I SNLCTEI+E ++ ETAVCNL S+ L R +
Sbjct: 409 SNQTGKDGNVIHLSNLCTEILEVTNASETAVCNLGSLNLGRMLS---------------- 452
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D K FDFERL ++ L+++ID+N+YPI T SN R RP+G+G+ GL D F
Sbjct: 453 -DGK---FDFERLRVNVQLAIRQLDRVIDLNYYPIPTAAASNSRWRPVGLGLMGLQDVFF 508
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L +PF++PEA+ L+K I E IY+ AL S +LA + GP++ + + + G LQ D W +
Sbjct: 509 QLRMPFDAPEARALSKKISEEIYFSALTTSCDLAEQHGPHQAFSETRAAHGELQFDAWGV 568
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
P D W++LRE I K G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 569 VPEDTARWAALRERIQKFGLRNSLMIAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 628
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VNK+L+++L LGLW+ A+++K+ GSV ++E+P ELKAIY+T WE+ ++L+D
Sbjct: 629 FLQVNKYLVRELQALGLWNDAMRSKLKMSEGSVQDLTELPAELKAIYRTAWEVPMRSLID 688
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
MAADRG +IDQSQSLN+ +E P+ GK++S++FYAW KG+KT YY+R+R A K TVD
Sbjct: 689 MAADRGAFIDQSQSLNLFVEAPNIGKMSSMYFYAWQKGLKT-TYYMRSRPATRITKTTVD 747
Query: 773 TSVLNNEKANRADN----------------------DVEANLAQVVCSLKNQEECMAC 808
TS + + A+ A N + EA + CSL+N E C AC
Sbjct: 748 TS--HGQNASVAPNMPVASAAPAAPAPTVTAEPKYTEAEA----LACSLENPEMCEAC 799
>gi|42523461|ref|NP_968841.1| ribonucleoside-diphosphate reductase alpha chain [Bdellovibrio
bacteriovorus HD100]
gi|39575667|emb|CAE79834.1| ribonucleoside-diphosphate reductase alpha chain [Bdellovibrio
bacteriovorus HD100]
Length = 801
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 341/823 (41%), Positives = 496/823 (60%), Gaps = 46/823 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KRDG EPV KI R+ K GL++ DP+ VA K +G+Y G +T +LD L
Sbjct: 9 MRVKKRDGTLEPVDVTKIVERVTKNCQGLTQ--VDPLRVATKAISGLYDGASTKELDNLC 66
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
+TA+ + P+Y+ LA R+ + + + ++ ++ D ++ G +A L+A+
Sbjct: 67 IQTASLLIGEDPEYSRLAARLLSTYIDEEVRSQKIQSFADSVSF-----GYQAGLLAEHT 121
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS--RVVERPQHMLMRVSVGI 178
Y+ + N A L AI R F+YFG +T+ YLLK + +V E PQ+ MRV+ G+
Sbjct: 122 YKFVETNKAALCAAIEPYRTDRFEYFGLRTVYDRYLLKNPTTRQVFETPQYFFMRVACGL 181
Query: 179 HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
+ + A++ Y L+S H + +TPTLFN+GT +PQ+SSC+LL D + IY
Sbjct: 182 AQS-VEEAIEFYRLISSHDYMPSTPTLFNSGTMRPQMSSCYLLDSPSDDLSAIYQKYTDI 240
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A++SK AGGIG++ +R+ GS I GTNG SNGI+P L+ + + V+QGG KRKGA
Sbjct: 241 ALLSKFAGGIGVAYSRVRSRGSLIKGTNGHSNGIIPWLKTMDSSVAAVNQGG-KRKGAAC 299
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
+YLE WH DI EFL+LR N G E RA +L A WVPDLFM+RV D WSLF P
Sbjct: 300 VYLETWHGDIEEFLELRDNTGDEAKRAHNLNLANWVPDLFMKRVEADAMWSLFDPKVVPH 359
Query: 359 LADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQ 418
D++G EFE Y + EE+ + AR L+ ++ + +TG +M FKD N K+NQ
Sbjct: 360 FVDTYGEEFEKAYVEAEEKKLYIKQLKARDLYSRMMKTLAQTGNGWMTFKDHANLKANQT 419
Query: 419 NLG--TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSK 476
I SNLCTEI+E +S +ETAVCNL S+ L R+V +
Sbjct: 420 GEAGNVIHLSNLCTEILEVTSDKETAVCNLGSVNLARHV--------------------E 459
Query: 477 NRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGL 536
N F+FE+LA + + L++++D+N YPI T + SN + RP+G+G+ GL D L+ L
Sbjct: 460 NGQFNFEKLARSVRTAVKYLDRVVDINFYPIPTAQDSNHKWRPVGLGVMGLQDALFLMKL 519
Query: 537 PFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSD 596
PF+S A+ L+ + E IYY+AL S EL+ K GP+ + + +KG+LQ D+W +TPS
Sbjct: 520 PFDSAAARDLSAKVQEEIYYNALVTSCELSEKHGPHGAFEQTKAAKGLLQYDLWGVTPSQ 579
Query: 597 RWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVV 656
+ L+E I K+G+RNSL++A PTA+ + I+G E EP SN++ R LSGEF+ +
Sbjct: 580 PERFEKLKEKIKKHGLRNSLMIAIAPTATIASIVGCYEAIEPQVSNLFKRETLSGEFMQI 639
Query: 657 NKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAAD 716
NK+L+ DL +G+W+ ++ +I ++GS+ ++ IP ++K +Y+TVWEI K+LVDMAAD
Sbjct: 640 NKYLVSDLKAMGIWTEEVRNEIKLQDGSIQDVAMIPPQIKELYRTVWEIPMKSLVDMAAD 699
Query: 717 RGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVL 776
RG YIDQ+QSLN+ E P GKL+S++ YAW KG+KT YYLR+R A K TV S
Sbjct: 700 RGAYIDQAQSLNLFQESPTIGKLSSMYMYAWKKGVKT-TYYLRSRPATKIAKTTVKASS- 757
Query: 777 NNEKANRADNDVEANLAQ-----------VVCSLKNQEECMAC 808
N+ +++ ++A AQ + CSL+N E C AC
Sbjct: 758 NSANPTASESMMDAAPAQEAKKSYSDAEVIACSLENPEACEAC 800
>gi|320107275|ref|YP_004182865.1| ribonucleoside-diphosphate reductase subunit alpha [Terriglobus
saanensis SP1PR4]
gi|319925796|gb|ADV82871.1| ribonucleoside-diphosphate reductase, alpha subunit [Terriglobus
saanensis SP1PR4]
Length = 815
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 331/817 (40%), Positives = 500/817 (61%), Gaps = 42/817 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G EPV +KI +++ ++GL + D + +A K G+Y G TT +LD ++
Sbjct: 31 MGVRKRNGALEPVDVNKIVRAVQRNAHGLGQ--VDAIRIASKTIGGLYDGATTRELDSIS 88
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHK--ITKN--SFSETIKDMYNYYNKRSGKKASLV 116
+TAA++ P Y+ LA R+ + + K + +N SFS++I Y Y + +V
Sbjct: 89 IDTAASLIAEEPQYSKLAARLLLGTIMKEVVGQNLHSFSQSIS--YGY-------QEGVV 139
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRV 174
+ E + + L+ AI + F+YFG +T+ YLL+ + +V+E PQH +RV
Sbjct: 140 SKATAEFVQTHMRKLNHAINDELSDRFEYFGLRTVYDRYLLRDPISRKVIETPQHFFLRV 199
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ G+ A++ Y+L++ H + ++PTLFN+GT Q+SSC+L DS++ IYDT
Sbjct: 200 ACGL-AGTPHEAIEFYNLIASHDYMPSSPTLFNSGTKHAQMSSCYLHDSPLDSLDSIYDT 258
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
K A++SK +GGIGL+ H +R+ GS I TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 259 YKNVALLSKFSGGIGLAFHRVRSEGSLIRATNGLSNGIVPWLRTLDSSVAAVNQGG-KRK 317
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLEPWHADI FL+LR+N G R +L A W+PDLFM+RV +DG WSLF P
Sbjct: 318 GACCVYLEPWHADIESFLELRENTGDLSRRTYNLNLANWIPDLFMQRVDEDGIWSLFDPK 377
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
+ D +G EFE Y Q E + + I AR L+ ++ S ETG +M FKD+CN K
Sbjct: 378 EVPTFPDLYGKEFEEAYIQAETDKKYHRQIKARDLYMRMMRSLAETGNGWMTFKDACNIK 437
Query: 415 SNQQNL--GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
+NQ + SNLCTEI E +S +ETAVCNL S+ L R+V +G
Sbjct: 438 NNQTGKPGNVVHLSNLCTEITEVTSKDETAVCNLGSVNLARHVTPEGK------------ 485
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
FDFE+LA +I L+++ID+N+YP+ +N R RP+G+G+ GL D F
Sbjct: 486 -------FDFEKLANTVRIAVPMLDRVIDINYYPVPQAASANARWRPVGLGVMGLQDVFF 538
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
+ +PF+SPEA ++ I E IYY+A+ AS ELA ++G + ++ + ++KG Q D+WN+
Sbjct: 539 QMRIPFDSPEALAISTKIQEEIYYYAVLASVELAEREGKHPSFDETRLAKGEFQFDLWNV 598
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
P+D W +LR+ I K+G+RNSLL+A PTA+ + I+G EC EP SN++ R LSGE
Sbjct: 599 KPADPERWDALRQRILKSGIRNSLLIAIAPTATIASIVGCYECIEPQISNLFKRETLSGE 658
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+++L + G+W+ ++ ++ GSV + ++PE+L+A+Y+TVWE+ ++L+D
Sbjct: 659 FLQVNRYLIEELKQRGMWTEEMRVRMKMSEGSVQAMEDLPEDLRAVYRTVWEVPMRSLID 718
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
MA DR +IDQSQSLN+ E P+ G+L+S++ +AW G+KT YYLR+R A K TV
Sbjct: 719 MARDRNAFIDQSQSLNLFAESPNIGRLSSMYMHAWKSGLKT-TYYLRSRPATKISKTTVS 777
Query: 773 TSVLNNEKANRADNDVE-ANLAQVVCSLKNQEECMAC 808
+ + + + A+ + CSL+N E C AC
Sbjct: 778 KAAAASAALADTASRPKVADAEAIACSLENPESCEAC 814
>gi|338536258|ref|YP_004669592.1| ribonucleoside-diphosphate reductase subunit alpha [Myxococcus
fulvus HW-1]
gi|337262354|gb|AEI68514.1| ribonucleoside-diphosphate reductase, alpha subunit [Myxococcus
fulvus HW-1]
Length = 838
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 345/817 (42%), Positives = 487/817 (59%), Gaps = 42/817 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G E V +KI + + GL + D + VA K +G+Y G TT +LD L+
Sbjct: 54 MRVRKRNGGTETVDLNKIVRAVGRSCQGLPR--VDAMRVATKTISGLYDGATTRELDSLS 111
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAAA+ V P+Y L+ R+ + + K N SFS+++ +G K L+
Sbjct: 112 IQTAAALIVEEPEYGRLSARLLATFIQKEVSNQDIHSFSQSVA---------AGHKHGLI 162
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRV 174
AD + + + NA L+ AI R+ F+YFG +T+ YLLK V+E PQ +RV
Sbjct: 163 ADRLLQFVQANARKLNAAIDPSRNDLFEYFGLRTVYDRYLLKNPQTREVLETPQEFFLRV 222
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + D+ + A++ Y L S + ++PTLFN+GT QLSSCFLL D ++ IY
Sbjct: 223 ASALSGDNVNEAIELYRLFSSLEYLPSSPTLFNSGTRHEQLSSCFLLDSPADELDAIYKK 282
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A++SK +GGIG++ H +RA GS I TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 283 YSDIAMLSKFSGGIGVAYHRVRARGSLIKSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 341
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHADI +FL+LR+N G + R +L A WVPDLFM+RV DG WSLF P
Sbjct: 342 GACCVYLETWHADIEDFLELRENTGDDARRTHNLNLANWVPDLFMKRVEADGDWSLFDPK 401
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
D +G FE Y++ E +G A + AR L+ ++ S +TG +M FKD NRK
Sbjct: 402 AVPHFTDLYGDAFEQAYAKAEADGLAMRKVKARDLYARMMKSLAQTGNGWMTFKDISNRK 461
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ ++ I SNLCTEI+E +S ETAVCNL S+ L R +
Sbjct: 462 SNQTGKDGNVIHLSNLCTEILEVTSQGETAVCNLGSLNLSRMLV---------------- 505
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D K FDFERL ++ L+++ID+N+YPI SN R RP+G+G+ GL D F
Sbjct: 506 -DGK---FDFERLRANAQLAMRQLDRVIDLNYYPIPAAASSNKRWRPVGLGLMGLQDVFF 561
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L L F+S EA+ L+K I E IY+ AL S ELA + G + ++ + ++G LQ D W +
Sbjct: 562 QLKLAFDSAEARALSKKISEEIYFAALTTSCELAEQYGAHASFPETRAARGELQFDHWGV 621
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
P D W +LR+ I K+G+RNSL++A PTA+ + I+G EC EP SN++ R LSG+
Sbjct: 622 VPEDTARWDALRQRIMKHGLRNSLMIAIAPTATIASIVGCYECIEPQVSNLFKRETLSGD 681
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L++DL LGLW+ + +I GSV ++E+PE L+A+Y+T WE+ ++L+D
Sbjct: 682 FLQVNRYLVRDLQALGLWNENTRNRIKMAEGSVQDLTELPEHLRAVYRTAWELPMRSLLD 741
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
M ADRG +IDQSQSLN+ +E P+ GKL+S++FYAW KG+KT YYLR+R A K TV
Sbjct: 742 MGADRGAFIDQSQSLNLFVETPNIGKLSSMYFYAWQKGLKT-TYYLRSRPATRIAKATVG 800
Query: 773 TSVLNNEKANRADNDVEANLAQ-VVCSLKNQEECMAC 808
+ +A A+ V CSL+N E C AC
Sbjct: 801 AGGGASVAQAAPAPVAKATEAEAVACSLENPEACEAC 837
>gi|323450453|gb|EGB06334.1| hypothetical protein AURANDRAFT_54285 [Aureococcus anophagefferens]
Length = 555
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 289/451 (64%), Positives = 368/451 (81%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+KR+G+KE VR+DKIT+R+KKL YG ++ P + QKV GVY GVTT +LDELA
Sbjct: 7 MQVVKRNGKKETVRYDKITSRIKKLCYGFDAKYIKPNQITQKVIQGVYDGVTTHELDELA 66
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
A+T A M HPD+++LA R++VSNLHK T +FS+ ++ ++ + + ++ K A+L++D+
Sbjct: 67 AQTTAYMATQHPDFSVLAARISVSNLHKSTDKTFSDVVEKLHKHVHPKTKKPAALISDET 126
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
Y + K+ ++ AI+YDRDF++DYFGFKTLERSYL+++D + ERPQHM+MRV++GIH
Sbjct: 127 YATVQKHKDAINAAIVYDRDFEYDYFGFKTLERSYLMRLDGAIAERPQHMIMRVALGIHG 186
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
DD A +TY +MSQ FTHATPTLFNAGTP+PQLSSCFLL MK+DSIEGIYDTLK+CA
Sbjct: 187 DDLAGAFETYEMMSQKMFTHATPTLFNAGTPRPQLSSCFLLAMKEDSIEGIYDTLKRCAA 246
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLS+HNIRA+ SYI G+NG+SNGIVPML+V+NDTARYVDQGG +RKG+FAIY
Sbjct: 247 ISKYAGGIGLSVHNIRATDSYICGSNGTSNGIVPMLRVYNDTARYVDQGGRRRKGSFAIY 306
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWHADI +LDL+KN G E RARDLFY LW+PDLFM+RV +G WSL CP++ GLA
Sbjct: 307 LEPWHADIEMWLDLKKNHGNELERARDLFYGLWIPDLFMKRVEANGFWSLMCPNECPGLA 366
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D G +FE LY +YE EG A+ I A++LWF IL+SQ+ETGTPYML+KD+CN KSNQ++L
Sbjct: 367 DCHGAKFEALYERYEAEGCARKAIPAQQLWFAILDSQVETGTPYMLYKDACNGKSNQKHL 426
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIAL 451
GTIKSSNLCTEIVE+++P+E AVCNLASI L
Sbjct: 427 GTIKSSNLCTEIVEYTAPDEIAVCNLASINL 457
>gi|389730177|ref|ZP_10189352.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
sp. 115]
gi|388440949|gb|EIL97269.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
sp. 115]
Length = 856
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 348/817 (42%), Positives = 473/817 (57%), Gaps = 44/817 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G +E V +KI + + + GL DP+ VA K G+Y G TT +LD+L+
Sbjct: 74 MRVTKRNGGQETVDVNKIVRAVTRSADGL--HAVDPMRVALKTIGGLYDGATTQELDQLS 131
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITK----NSFSETIKDMYNYYNKRSGKKASLV 116
TAAA+T P+Y LA R+ + + K SFS+++ G + ++
Sbjct: 132 IRTAAALTAEEPEYGQLAARLLGAYIDKEVTGQEIQSFSQSVA---------HGAELGIL 182
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSR--VVERPQHMLMRV 174
+ + + + NA L+ AI F+YFG +T+ YLL+ + V E PQ+ MR+
Sbjct: 183 NERLRDFVATNARKLNDAIDPLATRRFEYFGLRTVYDRYLLRHPQKRFVTETPQYFFMRI 242
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + +D L+ Y ++S + ++PTLFNAGT QLSSCFLL DS+E IYD
Sbjct: 243 ACALGGNDIAETLELYRMLSSLEYIASSPTLFNAGTAHEQLSSCFLLDSPTDSLESIYDK 302
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A +SK AGGIGL+ +R+ GS I GTNG SNG+VP L+ + + V+QGG KRK
Sbjct: 303 YADVAKLSKFAGGIGLAYSRVRSRGSLIKGTNGHSNGLVPWLKTLDASVAAVNQGG-KRK 361
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHADI EFL+LR N G E RA +L A W+PD FM RV DG WSLF P
Sbjct: 362 GAACVYLETWHADIEEFLELRDNTGDEARRAHNLNLANWIPDEFMRRVETDGDWSLFDPK 421
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
DSWG FE Y + E EG A + AR L+ +L + +TG +M FKD CN
Sbjct: 422 VVPHFVDSWGETFETAYRKAEAEGLAAKTVKARDLYARMLRTLAQTGNGWMTFKDRCNAT 481
Query: 415 SNQQNLG--TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ I SNLCTEI+E ++ ETAVCNL SI L R+V + V
Sbjct: 482 SNQTAKADNVIHLSNLCTEILEVTNAGETAVCNLGSINLSRHVIDGAV------------ 529
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D+++LA + LN++ID+N YPI+T +N + RP+G+G+ GL D F
Sbjct: 530 --------DYDKLATTVRTAVRQLNRVIDLNFYPIDTAATANRKWRPVGLGVMGLQDVFF 581
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-N 591
L LPF+S EA L+ I E IY+HAL S ELA +G + + S + G LQ D W N
Sbjct: 582 KLRLPFDSAEALALSSRIAEEIYFHALSQSNELAEAEGAHPGFAESRAASGDLQFDHWPN 641
Query: 592 ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSG 651
P D W++LRE I G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 642 AKPHDDARWNALRENIKAKGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 701
Query: 652 EFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLV 711
+F+VVN++L+ +L LGLW+ ++ I GS+ I+ IPE L+ IY+TVWE+ QK L+
Sbjct: 702 DFLVVNRYLVDELKTLGLWTSEVRDAIKLAEGSIQGITAIPERLRQIYRTVWELPQKALI 761
Query: 712 DMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
++ A RG YIDQSQSLN+ ME P+ G+L+S++ YAW G+KT YYLR+R A K TV
Sbjct: 762 ELGAARGAYIDQSQSLNLFMENPNIGQLSSMYMYAWKAGIKT-TYYLRSRPATKIAKTTV 820
Query: 772 DTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
+ A D D + A V CSL+N E C AC
Sbjct: 821 SAGKAEAKAAPAIDQDQAS--AAVFCSLENPEYCEAC 855
>gi|352086177|ref|ZP_08953756.1| ribonucleoside-diphosphate reductase, alpha subunit [Rhodanobacter
sp. 2APBS1]
gi|351679811|gb|EHA62945.1| ribonucleoside-diphosphate reductase, alpha subunit [Rhodanobacter
sp. 2APBS1]
Length = 806
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 344/817 (42%), Positives = 481/817 (58%), Gaps = 53/817 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G +E V +KI + + + GL DP+ V K G+Y G TT +LD+L+
Sbjct: 33 MRVTKRNGGQEAVDVNKIVRAVTRSAEGL--HGVDPLRVTLKTIGGLYDGATTAELDQLS 90
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITK----NSFSETIKDMYNYYNKRSGKKASLV 116
AAA+T P+Y LA R+ + + K S+S++I G + L+
Sbjct: 91 IRIAAALTAEEPEYGQLAARLLGAYIDKEVSGQEIQSYSQSIA---------RGTELGLL 141
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSR--VVERPQHMLMRV 174
+ + + + N L+ AI F+YFG +T+ YLL+ R V+E PQH MR+
Sbjct: 142 NERLRDFVAANTRKLNDAIDPLASRHFEYFGLRTVYDRYLLRHPQRRLVIETPQHFFMRI 201
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + ++ L+ Y L+S + ++PTLFNAGT QLSSC+LL DS+E IYD
Sbjct: 202 ACALGGNEIGETLELYRLLSSLEYLASSPTLFNAGTAHEQLSSCYLLDSPRDSLESIYDK 261
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A +SK AGGIGL+ +R+ GS I GTNG SNG+VP L+ + + V+QGG KRK
Sbjct: 262 YADVAKLSKFAGGIGLAYSRVRSRGSLIRGTNGHSNGLVPWLKTLDASVAAVNQGG-KRK 320
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHADI +FL+LR N G + RA +L A W+PD FM RV +DG+WSLF P
Sbjct: 321 GAACVYLESWHADIKDFLELRDNTGDDARRAHNLNIANWIPDEFMRRVENDGEWSLFDPK 380
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
DSWG F+ Y + E +G A + AR+L+ ++ + +TG +M FKD CN
Sbjct: 381 VVPHFVDSWGEAFDAAYRKAEADGLAVKTVKARELYARMMRTLAQTGNGWMTFKDRCNAT 440
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ + I SNLCTEI+E SS ETAVCNL S+ L R+V +
Sbjct: 441 SNQTAKPGNVIHLSNLCTEILEVSSATETAVCNLGSVNLARHVVDGA------------- 487
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
FDF++LA +I LN++ID+N+YPI+T R +N++ RP+G+G+ GL D F
Sbjct: 488 -------FDFDQLAATVRIAVRQLNRVIDLNYYPIDTARTANMKWRPVGLGVMGLQDVFF 540
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-N 591
L LPF+S EA L+ I E IY++AL S ELA +G + + S + G LQ D W +
Sbjct: 541 KLRLPFDSAEALALSTRIAEEIYFNALSQSCELAEAEGAHPGFAESRAANGELQFDHWPS 600
Query: 592 ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSG 651
P D W++LRE I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 601 AIPHDGARWNALRERIKQHGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 660
Query: 652 EFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLV 711
+F+ VN++L +L LGLW+ ++ I GS+ I+ IPE L+ IY+TVWE+ QK+L+
Sbjct: 661 DFLQVNRYLADELKTLGLWTSEIRDAIKLAEGSIQGIAAIPERLRQIYRTVWELPQKSLI 720
Query: 712 DMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
D+AA RG +IDQSQSLN+ ME P+ G+L+S++ YAW G+KT YYLR+R A K TV
Sbjct: 721 DLAAARGAWIDQSQSLNLFMENPNIGQLSSMYMYAWKAGIKT-TYYLRSRPATKIAKTTV 779
Query: 772 DTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
A + +AN A V CSL+N E C AC
Sbjct: 780 SA----------ASDQAQAN-AAVFCSLENPEYCEAC 805
>gi|67598375|ref|XP_666214.1| ribonucleoside-diphosphate reductase large chain (ribonucleotide
reductase R1 subunit) [Cryptosporidium hominis TU502]
gi|54657163|gb|EAL35983.1| ribonucleoside-diphosphate reductase large chain (ribonucleotide
reductase R1 subunit) [Cryptosporidium hominis]
Length = 526
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 315/533 (59%), Positives = 387/533 (72%), Gaps = 35/533 (6%)
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
G K AIYLEPWH D+ EF+++RKN GKEE R RDLF ALWVPDLFMERV D W+L
Sbjct: 12 GSVKVPIAIYLEPWHVDVVEFIEIRKNHGKEEMRCRDLFPALWVPDLFMERVEKDQDWTL 71
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDS 410
CP + GL D WG +F+ LY +YE++GR + + A+KLWF IL +QIETGTP++ +KD+
Sbjct: 72 MCPDECRGLQDVWGDDFKKLYEEYEKQGRGRKTMKAQKLWFLILQAQIETGTPFICYKDA 131
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
N KSNQ+NLGTI SSNLCTEI+E++S +E AVCNLASI LP++V
Sbjct: 132 ANSKSNQKNLGTIVSSNLCTEIIEYTSKDEVAVCNLASIGLPKFV--------------- 176
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D N+ FDF++L EVTK+IT NLNK+IDV +Y ++ + SNLRHRP+GIGIQGLAD
Sbjct: 177 ---DKNNKTFDFDKLKEVTKVITRNLNKLIDVGYYSLKECKNSNLRHRPLGIGIQGLADC 233
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
F++L +P+ES A++LNK IFE IYY AL AS ELA K GPYETY GSP SKGILQ DMW
Sbjct: 234 FMMLRMPYESEGAKKLNKQIFEVIYYAALDASCELAEKYGPYETYSGSPASKGILQFDMW 293
Query: 591 NITP-SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVL 649
+TP S DW SL++ ISK G+RNSLL++PMPTASTSQILGNNE FEP+TSNIY RRVL
Sbjct: 294 GVTPDSGLCDWDSLKDRISKYGIRNSLLISPMPTASTSQILGNNESFEPFTSNIYHRRVL 353
Query: 650 SGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKT 709
SGEF VVN HLL DL ELGLW LK II NGS+ I IPE+++ +YKTVWEIKQKT
Sbjct: 354 SGEFFVVNPHLLNDLLELGLWDDRLKQNIIANNGSIQNILTIPEDIRELYKTVWEIKQKT 413
Query: 710 LVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKF 769
++DMAADRG Y+ QSQSLNIHME + KL+S+HFY W KG+KTG+YYLRT++A I+F
Sbjct: 414 VIDMAADRGPYVCQSQSLNIHMENANFAKLSSMHFYGWKKGLKTGIYYLRTQSATRPIQF 473
Query: 770 TVDTSVLNNEKANRADNDVEANLAQ---------VVCSL-----KNQEECMAC 808
TVD +L +E + + +E N Q + C L K+ EECM C
Sbjct: 474 TVDQQLLKSE--TKEKDSLETNKRQALEPETQKLIACPLRPTNMKDDEECMMC 524
>gi|351714774|gb|EHB17693.1| Ribonucleoside-diphosphate reductase large subunit [Heterocephalus
glaber]
Length = 542
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 329/645 (51%), Positives = 415/645 (64%), Gaps = 118/645 (18%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSF 94
DP + KV +Y GVTT +LD LAAETAA +T HPDYA+LA R+AVSNLHK TK F
Sbjct: 5 DPAYITVKVIQALYCGVTTVELDTLAAETAATLTTKHPDYAILAARIAVSNLHKETKKVF 64
Query: 95 SETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERS 154
S+ ++ +YNY N +GK + +VA +I++ + L+ AIIYDRDF ++YFGFKTLERS
Sbjct: 65 SDVMEVLYNYINPHNGKHSPMVAQSTLDIVLSSKDRLNSAIIYDRDFSYNYFGFKTLERS 124
Query: 155 YLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQ 214
LLK++ +VVERP+HMLMRVSVGIHK+D D+A +TY+L+S+ WFTHA+P L
Sbjct: 125 CLLKINGKVVERPRHMLMRVSVGIHKEDIDAATETYNLLSEKWFTHASPIL--------- 175
Query: 215 LSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVP 274
C+ YI GTNG+SNG+VP
Sbjct: 176 --QCW-----------------------------------------YIAGTNGNSNGLVP 192
Query: 275 MLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWV 334
ML+++N T RYVDQ
Sbjct: 193 MLRMYNSTGRYVDQ---------------------------------------------- 206
Query: 335 PDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEIL 394
DLFM++V + W L CP++ GL + WG EFE LY YEE+G + V+ A++LW+ I+
Sbjct: 207 -DLFMKQVETNQDWPLICPNECPGLDEVWGEEFEMLYESYEEQGHVRRVVKAQQLWYAII 265
Query: 395 NSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRY 454
+Q ETGTPYML+KDS N+KSNQQNLGTIK SNLCTEIVE++S +E AVCNLAS+AL Y
Sbjct: 266 ETQTETGTPYMLYKDSYNQKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALKMY 325
Query: 455 VREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSN 514
V + +DF++LAEVTK+I NLNKII++N+YP+ SN
Sbjct: 326 VISE-------------------HTYDFKKLAEVTKVIVRNLNKIININYYPVPEAHLSN 366
Query: 515 LRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYET 574
H PIGIG+Q LADTFIL+ PFESPEAQ LNK IFETIYY AL+AS +LA + PYET
Sbjct: 367 KHHCPIGIGVQDLADTFILMRYPFESPEAQLLNKQIFETIYYVALEASCDLAKEHDPYET 426
Query: 575 YFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNE 634
Y GSP+SKGIL +MWN+TP+D WDW L+E I+K G+RNSLL+AP+PTAST+QILGNNE
Sbjct: 427 YEGSPVSKGILWYEMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPIPTASTAQILGNNE 486
Query: 635 CFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKII 679
EPYTSNIYTRR+LSGEF + N HLLKDLTE GLW+ +K +II
Sbjct: 487 SIEPYTSNIYTRRILSGEFQIANPHLLKDLTEWGLWNEEMKNQII 531
>gi|389794220|ref|ZP_10197378.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
fulvus Jip2]
gi|388432745|gb|EIL89734.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
fulvus Jip2]
Length = 816
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 342/817 (41%), Positives = 476/817 (58%), Gaps = 53/817 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+V KR+G +E V +KI + + + GL DP+ VA K G+Y G TT +LD+L+
Sbjct: 43 MHVTKRNGGQEAVDVNKIVRAVTRSAEGL--HGVDPLRVALKTIGGLYDGATTQELDQLS 100
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITK----NSFSETIKDMYNYYNKRSGKKASLV 116
TAA++T P+Y LA R+ + + K SFS++I G + ++
Sbjct: 101 IRTAASLTAEEPEYGQLAARLLGAYIDKEVSGQEIQSFSQSIA---------RGAELGIL 151
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSR--VVERPQHMLMRV 174
D + + + NA L+ AI F+YFG +T+ YLL+ R V+E PQH MR+
Sbjct: 152 NDRLRDFVATNARKLNDAIDPLATRRFEYFGLRTVYDRYLLRHPQRRLVIETPQHFFMRI 211
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + ++ L+ Y L+S + ++PTLFNAGT QLSSC+LL DS+E IYD
Sbjct: 212 ACALGGNEIGETLELYRLLSSLEYIASSPTLFNAGTCHEQLSSCYLLDSPVDSLESIYDK 271
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A +SK AGGIGL+ +R+ GS I GTNG SNG++P L+ + + V+QGG KRK
Sbjct: 272 YADVAKLSKFAGGIGLAYSRVRSRGSLIRGTNGHSNGLLPWLKTLDASVAAVNQGG-KRK 330
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHADI +FL+LR N G + RA +L A W+PD FM RV DG WSLF P
Sbjct: 331 GAACVYLETWHADIEDFLELRDNTGDDARRAHNLNIANWIPDEFMRRVESDGDWSLFDPK 390
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
DSWG F+ Y + E +G + AR+L+ ++ + +TG +M FKD CN
Sbjct: 391 VVPHFVDSWGETFDAAYRKAEADGLGVKTVKARELYARMMRTLAQTGNGWMTFKDRCNAT 450
Query: 415 SNQQNL--GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ I SNLCTEI+E SS ETAVCNL S+ L R+V +
Sbjct: 451 SNQTAKLENVIHLSNLCTEILEVSSVNETAVCNLGSVNLSRHVVDG-------------- 496
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
+F++++LA + LN++ID+N+YPI T R +N++ RP+G+G+ GL D F
Sbjct: 497 ------VFNYDQLAATVRTAVRQLNRVIDLNYYPIPTARTANMKWRPVGLGVMGLQDVFF 550
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-N 591
L LPF+S EA L+ I E IY++AL S ELA +G + + S + LQ D W N
Sbjct: 551 KLRLPFDSTEALALSTRIAEEIYFNALSQSCELAEGEGMHPGFAESRAANAELQFDYWPN 610
Query: 592 ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSG 651
TP + W +LRE I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 611 TTPHNTARWDALREKIKQHGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 670
Query: 652 EFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLV 711
+F+ VN++L +L LGLW+ ++ I GS+ I+ IPE L+AIY+TVWE+ QK L+
Sbjct: 671 DFLQVNRYLADELKALGLWTSEIRDAIKLAEGSIQNINAIPERLRAIYRTVWELPQKALI 730
Query: 712 DMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
++AA RG YIDQSQSLN+ ME P+ G+L+S++ YAW G+KT YYLR+R A K TV
Sbjct: 731 ELAAARGAYIDQSQSLNLFMENPNIGQLSSMYMYAWKAGIKT-TYYLRSRPATKIAKTTV 789
Query: 772 DTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
A D A V CSL+N E C AC
Sbjct: 790 S-----------AAPDQAQATAAVFCSLENPEYCEAC 815
>gi|238879998|gb|EEQ43636.1| ribonucleoside-diphosphate reductase large chain [Candida albicans
WO-1]
Length = 583
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 303/567 (53%), Positives = 402/567 (70%), Gaps = 20/567 (3%)
Query: 8 GRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAM 67
G +E KI L+++S+ L D ++ + V G+ +T +L AE A+
Sbjct: 9 GEEEDFDSVKIHKLLEEVSFNLGDLDLDQIV--ESVQRGLPSSLTIEELYTFIAEVIASR 66
Query: 68 TVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKN 127
+ HPDYA+LAGR+ L+ SFSE ++ + Y ++S S ++ Y+++ K+
Sbjct: 67 VIYHPDYAILAGRIETRKLYLKVPYSFSENVERLRKYRPRKS-NSYSPISSAFYKVVKKH 125
Query: 128 AACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDSAL 187
LD I RD++ YFG KTLE SYLLK+D V E PQ++ MRV++GIH++D ++
Sbjct: 126 GEFLDKVIDKTRDYNLTYFGIKTLESSYLLKIDGEVAELPQYLFMRVAIGIHQNDINAIA 185
Query: 188 KTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGG 247
+TY LMSQ +F HA+PTL+NAG+ LSSCFL+ MKDDSI+GI+ TL + A+ISK++GG
Sbjct: 186 ETYDLMSQKYFIHASPTLYNAGSEFNYLSSCFLVAMKDDSIDGIFKTLNEAALISKASGG 245
Query: 248 IGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHAD 307
IG+ +HNIR++GSYI TNG+SNG+VPML+V+N+TARYVDQGGGKR GAFAIY+EPWH D
Sbjct: 246 IGIHVHNIRSNGSYIASTNGNSNGLVPMLRVYNNTARYVDQGGGKRPGAFAIYIEPWHGD 305
Query: 308 IFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEF 367
IF+ L++RKN G EE R RDLFY LW+PDLFM+RV+++ W+LF P++A GL+D +G EF
Sbjct: 306 IFDILEMRKNHGNEEMRTRDLFYGLWIPDLFMKRVKENSDWTLFSPNEAVGLSDVYGEEF 365
Query: 368 EHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSN 427
E LY +YE EG V SA KLW IL+SQ ETG PYML+KD+CN KSNQ+N+GTIKSSN
Sbjct: 366 EKLYCKYESEGFGTKV-SAHKLWLAILHSQTETGGPYMLYKDACNTKSNQKNIGTIKSSN 424
Query: 428 LCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAE 487
LC EIVE+SSP+ETAVCNLAS+ALP Y++ +G FDFE+L
Sbjct: 425 LCCEIVEYSSPKETAVCNLASLALPTYLK--------TTEDAIG--------FDFEKLHS 468
Query: 488 VTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLN 547
VTK++T NLN++IDV YP+ET SN RHRPI +G+QGLAD F L LPF+S A+ LN
Sbjct: 469 VTKVLTRNLNRVIDVTKYPVETAEYSNKRHRPIALGVQGLADLFAELRLPFDSAMAKTLN 528
Query: 548 KDIFETIYYHALKASAELAVKDGPYET 574
IFETIY+ AL+AS ELA+K+GPYET
Sbjct: 529 IQIFETIYHAALEASVELAMKEGPYET 555
>gi|357415821|ref|YP_004928841.1| ribonucleoside-diphosphate reductase subunit alpha
[Pseudoxanthomonas spadix BD-a59]
gi|355333399|gb|AER54800.1| ribonucleoside-diphosphate reductase, alpha subunit
[Pseudoxanthomonas spadix BD-a59]
Length = 807
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 342/816 (41%), Positives = 481/816 (58%), Gaps = 45/816 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G E V +KI +++ + GL DP+ VA + +G+Y G +T +LDEL+
Sbjct: 28 MRVKKRNGGSEAVDLNKIVRAVQRCADGL--HAVDPMRVATRTISGLYDGASTQELDELS 85
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITK----NSFSETIKDMYNYYNKRSGKKASLV 116
TAA + P+Y LA R+ + + K ++FS++I G + L+
Sbjct: 86 IRTAALLIGEEPEYGRLAARLLANCIAKEVAGQQIHAFSQSIS---------RGHEVGLI 136
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM--DSRVVERPQHMLMRV 174
+ E + NA L+ AI + D +F+YFG +TL YLL+ +V+E PQ +R+
Sbjct: 137 NARLLEFVQANARKLNDAIDLNLDREFEYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 196
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + ++ AL Y M++ + ++PTLFNAGT QLSSCFLL DS+E IY
Sbjct: 197 ASAL-SEEVPEALALYQRMARLDYLPSSPTLFNAGTTHEQLSSCFLLDSPQDSLESIYAR 255
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A +SK +GGIG+S +RA GS I TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 256 YGDIAQLSKFSGGIGVSYSRVRARGSLISSTNGHSNGIVPWLKTLDSSVAAVNQGG-KRK 314
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHAD+ +FL+LR N G + R +L A WVPDLFM+RV D WSLF P
Sbjct: 315 GAACVYLETWHADLEDFLELRDNAGDDARRTHNLNLANWVPDLFMQRVEADAPWSLFDPK 374
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
L D +G FEH Y Q E +G+A I+ARKL+ ++ + ETG +M FKD CN
Sbjct: 375 TTPELPDLYGEAFEHAYLQAEAQGKATKTIAARKLYARMMRTLAETGNGWMTFKDKCNLA 434
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ + I SNLCTEI+E +S +ETAVCNL SI L G
Sbjct: 435 SNQTLRAGNVIHLSNLCTEILEVTSSDETAVCNLGSINL-------------------GR 475
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
+ FDF++LA+ ++ L+++ID+N YPI+T RR NLR RP+G+G GL D F
Sbjct: 476 HFDDHGDFDFDKLAQTVRLAVHQLDRVIDLNFYPIQTARRGNLRWRPVGLGCMGLQDVFF 535
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L F+S +A+ L+ I ETIY+HAL+ S ELA + G + ++ + + G LQ D WN+
Sbjct: 536 KKRLAFDSAQARALSNKIAETIYFHALETSCELAQQRGRHPSFADTRAASGALQFDAWNV 595
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
TP D W +LR I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 596 TPEDTARWDALRARIRQHGLRNSLLIAIAPTATIASIAGCYECVEPQLSNLFKRETLSGD 655
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+ +L +LGLW+ ++ I GS+ I++IP+ L+ IY+T WEI ++L+D
Sbjct: 656 FLQVNRYLVDELKKLGLWTAQMRDAIKLAEGSIQGIAQIPQTLRQIYRTAWEIPMRSLID 715
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
MAA RG +IDQS SLN+ ME P+ G L+S++ YAW +G+KT YYLR+R A K T+
Sbjct: 716 MAAGRGAFIDQSASLNLFMESPNIGALSSMYMYAWKQGLKT-TYYLRSRPATRIAKATLS 774
Query: 773 TSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
A EA V CSL+N E C AC
Sbjct: 775 HDASQAPAPKPAFTPDEA----VSCSLENPEGCEAC 806
>gi|194377960|dbj|BAG63343.1| unnamed protein product [Homo sapiens]
Length = 454
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 290/473 (61%), Positives = 364/473 (76%), Gaps = 20/473 (4%)
Query: 339 MERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQI 398
M+RV + WSL CP++ GL + WG EFE LY+ YE++GR + V+ A++LW+ I+ SQ
Sbjct: 1 MKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQT 60
Query: 399 ETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREK 458
ETGTPYML+KDSCNRKSNQQNLGTIK SNLCTEIVE++S +E AVCNLAS+AL YV
Sbjct: 61 ETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV--- 117
Query: 459 GVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHR 518
+ +DF++LAEVTK++ NLNKIID+N+YP+ SN RHR
Sbjct: 118 ----------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHR 161
Query: 519 PIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGS 578
PIGIG+QGLAD FIL+ PFES EAQ LNK IFETIYY AL+AS +LA + GPYETY GS
Sbjct: 162 PIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGS 221
Query: 579 PMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
P+SKGILQ DMWN+TP+D WDW L+E I+K G+RNSLL+APMPTAST+QILGNNE EP
Sbjct: 222 PVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEP 281
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
YTSNIYTRRVLSGEF +VN HLLKDLTE GLW +K +II NGS+ I EIP++LK +
Sbjct: 282 YTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQL 341
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
YKTVWEI QKT++ MAA+RG +IDQSQSLNIH+ +P++GKLTS+HFY W +G+KTGMYYL
Sbjct: 342 YKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYL 401
Query: 759 RTRAAADAIKFTVDTSVLNNEKANRADNDVEA-NLAQVVCSLKNQEECMACGS 810
RTR AA+ I+FT++ L +++ + + + N A +VCSL+N++EC+ CGS
Sbjct: 402 RTRPAANPIQFTLNKERLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 454
>gi|383315472|ref|YP_005376314.1| ribonucleoside-diphosphate reductase subunit alpha [Frateuria
aurantia DSM 6220]
gi|379042576|gb|AFC84632.1| ribonucleoside-diphosphate reductase, alpha subunit [Frateuria
aurantia DSM 6220]
Length = 816
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 343/818 (41%), Positives = 471/818 (57%), Gaps = 43/818 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M + KR G E V +KI + + + GL DP+ VA K G+Y G TT +LD+L+
Sbjct: 31 MRITKRSGVTELVDVNKIVKAVTRSADGLHA--VDPMRVALKTIGGLYDGATTKELDQLS 88
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITK----NSFSETIKDMYNYYNKRSGKKASLV 116
TAAA+T P+Y LA R+ + + K SFS+++ G + ++
Sbjct: 89 IRTAAALTSEEPEYGQLAARLLGAFIDKEVSGQEIQSFSQSVA---------RGVELGIL 139
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM-DSRVV-ERPQHMLMRV 174
D + + + +A L+ AI D F+YFG +T+ YLL+ SR+V E P + MR+
Sbjct: 140 NDRLRDFVALHARKLNDAIDLDTTRRFEYFGLRTVYDRYLLRHPQSRLVLETPTYFFMRI 199
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + D L+ Y L+S + ++PTLFNAGT QLSSCFLL DS+E IYD
Sbjct: 200 ACALGGGDIGETLELYRLLSSLEYLASSPTLFNAGTTHEQLSSCFLLDSPTDSLESIYDK 259
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
A +SK AGGIGL+ +R+ GS I GTNG SNG+VP L+ + + V+QGG KRK
Sbjct: 260 YADVAKLSKFAGGIGLAYSRVRSRGSLIRGTNGHSNGLVPWLKTLDASVAAVNQGG-KRK 318
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLE WHADI EFL+LR N G E R +L A WVPD FM RV DG WSLF P
Sbjct: 319 GAACVYLETWHADIEEFLELRDNTGDHERRTHNLNLANWVPDEFMRRVETDGNWSLFDPK 378
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
D+WG FE Y + E EG A + AR L+ +L + +TG +M FKD N
Sbjct: 379 IVPHFVDTWGETFEAAYRKAEAEGLAVKTVKARDLYARMLRTLAQTGNGWMTFKDRANAT 438
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ + I SNLCTEI+E ++ +ETAVCNL S+ L R+V++
Sbjct: 439 SNQTARPENVIHLSNLCTEILEVTNAQETAVCNLGSVNLSRHVQDG-------------- 484
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
+F+FE+L + LN++ID+N YPI+T +N + RP+G+G+ GL D F
Sbjct: 485 ------VFNFEQLGTTVRTAVRQLNRVIDLNFYPIDTAAVANRKWRPVGLGLMGLQDVFF 538
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-N 591
L L F+SPEA L+ I E IYYHAL S E+A +DG + + + + G LQ D W
Sbjct: 539 KLRLAFDSPEALDLSSRISEEIYYHALAQSCEIAEQDGAHPGFPETRAANGELQFDYWPK 598
Query: 592 ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSG 651
+ +D W +LRE I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 599 ASQADTARWDALREKIKQHGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 658
Query: 652 EFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLV 711
+F+VVN++L +L LGLW+ ++ +I GS+ I IPE L+ IY+T WE+ QK L+
Sbjct: 659 DFLVVNRYLSNELKALGLWTAEIRDQIKLAEGSIQGIMAIPERLRLIYRTTWELPQKALI 718
Query: 712 DMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
++AA R YIDQSQSLN+ ME P+ G+L+S++ YAW G+KT YYLR+R A K TV
Sbjct: 719 ELAAARSAYIDQSQSLNLFMENPNIGQLSSMYMYAWKSGLKT-TYYLRSRPATKIAKTTV 777
Query: 772 DTSVLNN-EKANRADNDVEANLAQVVCSLKNQEECMAC 808
N D + A V CSL+N E C AC
Sbjct: 778 GMGGQNQAPVPAAPAADQQQAEAAVFCSLENPEYCEAC 815
>gi|408826316|ref|ZP_11211206.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
somaliensis DSM 40738]
Length = 784
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 330/790 (41%), Positives = 460/790 (58%), Gaps = 58/790 (7%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSF 94
DP VA G + G +L ELA E AA + P Y+ LA R+
Sbjct: 36 DPGRVAAAALRGRHAGSDEAELRELATEAAAGLIAEDPAYSRLAARL------------L 83
Query: 95 SETIKD-------MYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFG 147
+ TI D + + +G + L+AD +++ ++AA LD I + D F YFG
Sbjct: 84 ARTIADEAAGQGAVAFSASVAAGHREGLIADRTADLVARHAARLDAVIDPEADDRFGYFG 143
Query: 148 FKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSAL----KTYHLMSQHWFTHA 201
+TL YLL+ + +VVE PQH L+RV+ G+ +DD+D AL Y LMS+ + +
Sbjct: 144 LRTLYSRYLLRHPITRKVVETPQHFLLRVACGLAEDDSDRALGEVEALYGLMSRLDYLPS 203
Query: 202 TPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSY 261
+PTLFN+GT PQ+SSC+LL D ++ IY + A +SK AGGIGLS IRA GS
Sbjct: 204 SPTLFNSGTRHPQMSSCYLLDSPQDELDSIYGRYHQVARLSKHAGGIGLSYSRIRARGSL 263
Query: 262 IHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKE 321
I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHADI EFL+LR N G++
Sbjct: 264 IRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGED 322
Query: 322 ECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAK 381
R +L A WVPD FM RV DD +WSLF PSD L D WG EF+ Y E G A+
Sbjct: 323 ARRTHNLNLAHWVPDEFMRRVSDDAEWSLFSPSDVPELVDLWGEEFDAAYRAAEARGLAR 382
Query: 382 MVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPE 439
+ AR L+ ++ + +TG +M FKD+ NR +NQ + T+ SSNLCTEI+E +
Sbjct: 383 RTMPARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHTVHSSNLCTEILEVTDDG 442
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
ETAVCNL S+ L +V G+ D+ERL E + L+++
Sbjct: 443 ETAVCNLGSVNLGAFVTGGGM--------------------DWERLDETVRTAVTFLDRV 482
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
+D+N YP E RSN R RP+G+G+ GL D F L LPF+SPEA+ L+ I E I A
Sbjct: 483 VDINFYPTEEAARSNTRWRPVGLGVMGLQDVFFKLRLPFDSPEARALSTRIAERIMLAAY 542
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVA 619
ASA+LA + GP + + ++G+L D +++ P+ W++LRE I+ G+RNSLL+A
Sbjct: 543 GASADLAERSGPLPAWDKTRTARGVLHPDHYDVEPAWPERWAALRERIASVGLRNSLLLA 602
Query: 620 PMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKII 679
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL ELG+W + +
Sbjct: 603 IAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDDLKELGVWDAQTREALR 662
Query: 680 YENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKL 739
NGSV + +P E++ +Y+T WEI Q+ L+DMAA R ++DQSQSLN+ +E P GKL
Sbjct: 663 EANGSVQGFTWVPAEVRELYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTIGKL 722
Query: 740 TSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSV-LNNEKANRADNDVEANLAQVVCS 798
+S++ YAW +G+KT YYLR+R A + +V + ++ + D V CS
Sbjct: 723 SSMYAYAWKQGLKT-TYYLRSRPATRIARAASAATVPVPVQQVSEPD--------AVACS 773
Query: 799 LKNQEECMAC 808
L+N E C AC
Sbjct: 774 LENPESCEAC 783
>gi|256825984|ref|YP_003149944.1| ribonucleoside-diphosphate reductase subunit alpha [Kytococcus
sedentarius DSM 20547]
gi|256689377|gb|ACV07179.1| ribonucleoside-diphosphate reductase, alpha subunit [Kytococcus
sedentarius DSM 20547]
Length = 875
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 337/865 (38%), Positives = 489/865 (56%), Gaps = 83/865 (9%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V+KR G E V KI A +++ GL + DP+ VA K +G+Y G TT +LD+LA
Sbjct: 36 MRVVKRSGEHEQVDVTKIVAAVERCCDGLPE--VDPLRVATKTISGLYDGATTAELDKLA 93
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
TAA MT P Y+ LAGR+ + K + SFS + R+G + L+
Sbjct: 94 IATAAEMTATEPQYSRLAGRLLAGVIDKEVRGQGIGSFSAAV---------RTGHEQGLI 144
Query: 117 ADDVYEIIMKNAACLDGAIIYDR----DFDFDYFGFKTLERSYLLK--MDSRVVERPQHM 170
D+ + ++A+ LD A+ + D+ FDYFG +T+ YLL+ + VVE PQ+
Sbjct: 145 GDETAAFVAEHASRLDDAVYRAQAAHADWRFDYFGLRTVYDRYLLRHPLTRAVVESPQYW 204
Query: 171 LMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
LMRVS G+ + A++ + L+S + ++PTLFN+GT Q+SSC+L+ D ++
Sbjct: 205 LMRVSAGLSHTG-EEAVEFFELLSSLAYLPSSPTLFNSGTRHTQMSSCYLIDSPQDDLDS 263
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY+ + A +SK AGGIGL+ IR+ G+ I GTNG SNGIVP L+ + + V+QGG
Sbjct: 264 IYERYHQVAKLSKFAGGIGLAFSRIRSRGALIRGTNGHSNGIVPWLRTLDASVAAVNQGG 323
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
+RKGA IYLEPWH D+ EFL+LR N G++ R +L A W+PD FM RV DG+WSL
Sbjct: 324 -RRKGAACIYLEPWHPDVEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVEADGQWSL 382
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDS 410
P L D WG F+ Y EE G +SAR L+ ++ + +TG +M FKD+
Sbjct: 383 IDPDAVPELPDLWGPAFDAAYRAAEERGDVVRTVSARYLYGRMMRTLAQTGQGWMTFKDA 442
Query: 411 CNRKSNQ---------------QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYV 455
NR NQ Q + SNLCTEI+E +S +ETAVCNL S+ L ++
Sbjct: 443 SNRACNQTSDDQTPRVAADGTVQPAPVVHLSNLCTEIIEVTSNDETAVCNLGSVNLAAHL 502
Query: 456 R----EKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTR 511
+ GV ++ G D +RL ++ L+++ID+N+YP E
Sbjct: 503 QWSDGTTGVRPTDPAARATG--------IDTDRLRSTVRLAVTYLDRVIDINYYPSEQAA 554
Query: 512 RSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGP 571
SN R RPIG+G GL D F L +PF++PEA++L+ I E I AL+ SAELA + G
Sbjct: 555 ASNPRWRPIGLGSMGLQDVFFALRMPFDAPEAKELSTRIAEEIQLSALERSAELAEQFGA 614
Query: 572 YETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILG 631
+ + + ++G LQ D+ + P+ W+++R+ I+ +G+RNSL++A PTA+ + I G
Sbjct: 615 HPAFAETRAARGQLQHDLQGVEPTQTERWAAVRQRIADHGLRNSLMIAIAPTATIASIAG 674
Query: 632 NNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEI 691
EC EP SN++ R LSGEF+ VN L+ +L LGLW+ A++ K+ +NGSV+ I+++
Sbjct: 675 CYECIEPQVSNLFKRETLSGEFMQVNTALVGELKSLGLWTEAVREKLKADNGSVAGIADL 734
Query: 692 PEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGM 751
PEE + +++T WE+ QK L++MAA R Y+DQSQSLN+ ME P+ GKL+S++ YAW G+
Sbjct: 735 PEETRRLFRTAWELPQKALIEMAAARQAYVDQSQSLNLFMESPNIGKLSSMYLYAWKAGL 794
Query: 752 KTGMYYLRTRAAADAIKFTVD----------------------------TSVLNNEKANR 783
KT YYLR+R A + TV L + R
Sbjct: 795 KT-TYYLRSRPATRIQQATVAGVRAGASWGAATGAPGASQPTAPGSPGVVGGLTASEPVR 853
Query: 784 ADNDVEANLAQVVCSLKNQEECMAC 808
D EA + CSL+N E C AC
Sbjct: 854 TFTDEEA----LACSLENPEACEAC 874
>gi|117928931|ref|YP_873482.1| ribonucleoside-diphosphate reductase subunit alpha [Acidothermus
cellulolyticus 11B]
gi|117649394|gb|ABK53496.1| ribonucleoside-diphosphate reductase, alpha subunit [Acidothermus
cellulolyticus 11B]
Length = 781
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 329/820 (40%), Positives = 477/820 (58%), Gaps = 52/820 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G EPV +KI +++ + L+ DP+ VA K +G+Y G TT +LD L+
Sbjct: 1 MRVRKRNGDTEPVDVNKIVRAVERWADDLTD--VDPLRVATKTISGLYDGATTAELDRLS 58
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAA + P Y+ LA R+ + + K N SFS++I G L+
Sbjct: 59 IQTAAELIAEEPQYSKLAARLLAAYIEKEVHNQGIASFSQSIA---------LGHAEGLI 109
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSR--VVERPQHMLMRV 174
D+ + NA D AI D F+YFG +T+ YLL+ + V+E PQ+ L+RV
Sbjct: 110 GDETARFVKDNARKFDFAIDPKGDQRFEYFGLRTVYDRYLLRHPTSRLVIETPQYFLLRV 169
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ G+ + + A++ Y LMS+ + ++ TLFN+GT PQ+SSC+L+ D ++ IY
Sbjct: 170 ACGLARTPAE-AIEFYRLMSELAYLPSSATLFNSGTRHPQMSSCYLVDSPRDELDSIYAR 228
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG+ +R+ G+ I GTNG SNGIVP L+ + + V+QGG +RK
Sbjct: 229 YHQVARLSKFAGGIGIGFSRVRSRGALIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRK 287
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLEPWH DI EFL+LR N G++ R +L A W+PD FM RV D WSL P
Sbjct: 288 GAACVYLEPWHPDIEEFLELRDNTGEDARRTYNLNLANWIPDEFMRRVEADELWSLIDPD 347
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
A L D WG +F+ Y + E EGR + AR L+ +++ + ETG +M FKD+CN K
Sbjct: 348 QAPELVDLWGADFDAAYRRAEAEGRYVRQVRARDLYAKMMRTLAETGNGWMTFKDACNAK 407
Query: 415 SNQQNL--GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
NQ + SNLCTEIVE + +E AVCNL SI L R+VR+ V
Sbjct: 408 CNQTGRPGNVVHLSNLCTEIVEVNRDDEIAVCNLGSINLARHVRDGAV------------ 455
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D++RL +I L++++D+N YP RSN + RPIG+G+ GL D F
Sbjct: 456 --------DWDRLRRTVQIAVPLLDRVVDINFYPTPEAARSNEKWRPIGLGVMGLQDVFF 507
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L LPF+S EA +L+ I E IY AL+ SAELA + GP+ + + + G LQ D+W +
Sbjct: 508 ALRLPFDSGEALELSTRIAEEIYLTALEVSAELAAEYGPHPAFPETRAAAGYLQPDLWGV 567
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
TP+ + +++++E I+ G+RNSLL+A PTA+ + I G E EP SN++ R LSGE
Sbjct: 568 TPTQQERYAAIKERIAAVGLRNSLLIAIAPTATIASIAGCYESIEPMVSNLFKRETLSGE 627
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VN L+ +L GLW+ ++ I +GSV ++ +PEE++ +++T WE+ QK L+D
Sbjct: 628 FLQVNTALVNELKTRGLWTKEIREAIKRADGSVQGLTVLPEEVRRVFRTAWELPQKALID 687
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
+AA RG YIDQSQSLN+ M P KL+S++ YAW+ G+KT YYLR+R A + TV
Sbjct: 688 LAAARGPYIDQSQSLNLFMAAPTISKLSSMYRYAWASGLKT-TYYLRSRPATRIQQATVT 746
Query: 773 TSVLNNEKANRADNDVEANLA----QVVCSLKNQEECMAC 808
+ ++ + DV AN + CSL+N E C C
Sbjct: 747 VTSSDDVR------DVMANPSTSKPATSCSLENPETCEVC 780
>gi|383650824|ref|ZP_09961230.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
chartreusis NRRL 12338]
Length = 785
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 331/792 (41%), Positives = 462/792 (58%), Gaps = 61/792 (7%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRV------AVSNLH 87
DP VA G ++L ELA E AA + P Y+ LA R+ A +
Sbjct: 37 ADPGRVAAAALRGRSARADASELRELATEAAAGLISEDPVYSRLAARLLTIGIRAEAASQ 96
Query: 88 KITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFG 147
+T+ F+E++ G + L+AD + +AA LD I D F YFG
Sbjct: 97 GVTR--FTESVA---------VGHREGLIADRTAAFVRTHAARLDALIDTAADDRFGYFG 145
Query: 148 FKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT----DSALKTYHLMSQHWFTHA 201
+TL YLL+ + +VVE PQ+ ++RV+ G+ +DDT D Y LMS+ + +
Sbjct: 146 LRTLHSRYLLRHPITRKVVETPQYFMLRVAAGLAEDDTSRSVDEVAALYGLMSRLDYLPS 205
Query: 202 TPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSY 261
+PTLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIG++ IRA GS
Sbjct: 206 SPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGIAYSRIRARGSL 265
Query: 262 IHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKE 321
I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G++
Sbjct: 266 IRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGED 324
Query: 322 ECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAK 381
R +L A WVPD FM RV DG+WSLF PSD L D WG EF+ Y E +G A+
Sbjct: 325 ARRTHNLNLAHWVPDEFMRRVNADGQWSLFSPSDVPELVDLWGEEFDAAYRAAEAKGLAR 384
Query: 382 MVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPE 439
+ AR+L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E +
Sbjct: 385 KTLPARELYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHSSNLCTEILEVTGDG 444
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
ETAVCNL S+ N+ LV D D+ERL E + L+++
Sbjct: 445 ETAVCNLGSV---------------NLGALV---DRSGGDIDWERLDETVRTAVTFLDRV 486
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
+D+N YP E RSN R RP+G+G+ GL D F L LPF+SPEA++L+ I E I A
Sbjct: 487 VDINFYPTEQAGRSNARWRPVGLGVMGLQDVFFKLRLPFDSPEAKRLSTRIAERIMLAAY 546
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVA 619
+ASA+LA ++GP + + +KG+L D +++ P+ W++LRE ++ G+RNSLL+A
Sbjct: 547 EASADLAERNGPLPAWEKTRTAKGVLHPDHYDVQPTWPERWAALRERVAATGMRNSLLLA 606
Query: 620 PMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKII 679
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+++L LG W + +
Sbjct: 607 IAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVEELKRLGAWDARTREALR 666
Query: 680 YENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKL 739
NGSV + IP +++A+Y+T WEI Q+ L+DMAA R ++DQSQSLN+ ME P GKL
Sbjct: 667 EANGSVQDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFMETPTIGKL 726
Query: 740 TSLHFYAWSKGMKTGMYYLRTRAA---ADAIKFTVDTSVLNNEKANRADNDVEANLAQVV 796
+S++ YAW G+KT YYLR+R A A A + TV +A D EA V
Sbjct: 727 SSMYAYAWKSGLKT-TYYLRSRPATRIARAAQATVPV---------QATPDPEA----VA 772
Query: 797 CSLKNQEECMAC 808
CSL+N E C AC
Sbjct: 773 CSLENPESCEAC 784
>gi|392558225|gb|EIW51419.1| alpha subunit of ribonucleoside diphosphate reductase [Trametes
versicolor FP-101664 SS1]
Length = 838
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 294/735 (40%), Positives = 453/735 (61%), Gaps = 37/735 (5%)
Query: 39 VAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITK-NSFSET 97
+A + GV +++ + ELAA TAA +HP Y +LAGR+ +N+HK+ FS+
Sbjct: 46 IASAITHGVQAAMSSHDIQELAALTAANFNTHHPQYNILAGRLVAANIHKVVPIRRFSDN 105
Query: 98 IKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLL 157
++ + + L+ + + LD ++ DRDF Y K +E+SYLL
Sbjct: 106 VERIV-------AEHPGLLDETFVANARRYGEQLDNMLMQDRDFGMPYPCIKLMEQSYLL 158
Query: 158 KMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSS 217
++ ++ERPQH MRV++ ++ +D ++ +TY+++S+ +THA+PT+FNAG L S
Sbjct: 159 RVGDAILERPQHAYMRVALALNANDINAIEETYNMLSRRAYTHASPTMFNAGLSDQALIS 218
Query: 218 CFLLCMK----DDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIV 273
CF+ + D+I+G+ + A + S GIGL +Y N G++
Sbjct: 219 CFVQSAEYTSTPDAIKGMMQASE--AFLKNSGIGIGLD-----KVPAYRPDANPPQPGVI 271
Query: 274 PMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALW 333
+L ++ A + KR A + WHAD+ + +++R+ + RD++ ALW
Sbjct: 272 ALLNMYQQVAEFTTDARSKRPSAATAVIPIWHADVTKVINIRRGNVLGQAPLRDIYPALW 331
Query: 334 VPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEI 393
+ DLFM RV+++ WSLF P+DA LA+ +G FE Y+Q E+ ++ + AR L+++I
Sbjct: 332 IADLFMRRVQENVYWSLFDPADAPQLAELYGAAFEAEYTQLEQSNIQRVTVLARSLFYQI 391
Query: 394 LNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPR 453
+ QI +GTPY+++ D+ N K+NQ +LGTI+++NLCTEIV+FSS T VC L+S++LP
Sbjct: 392 VVMQIRSGTPYIMYADAINAKNNQSHLGTIRATNLCTEIVQFSSRTRTPVCALSSLSLPA 451
Query: 454 YVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRS 513
+V S + FDF+ L TK+ T ++++D+N YP R S
Sbjct: 452 FV------------------SSDDHTFDFDALHHATKVATRCTDRVLDINDYPSPEARAS 493
Query: 514 NLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYE 573
+ R IG+G+QGLAD F ++G+P+ S EA++LN IFETIY+ AL+ S+E+A + GP+
Sbjct: 494 AVETRAIGVGVQGLADVFRMMGIPYGSDEARRLNVSIFETIYHGALEESSEMAERFGPFP 553
Query: 574 TYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNN 633
+ SP S+G+LQ DMWN TPSDR+D+ +LR I+K+G+RNS+L A MPT+STSQ+LGNN
Sbjct: 554 AWNRSPASQGVLQCDMWNCTPSDRYDFDALRARIAKHGLRNSMLTAVMPTSSTSQLLGNN 613
Query: 634 ECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPE 693
+ EPY SNIYTRR L GE+ ++ HL+++L GLW+ ++ +II GSV I+ IP+
Sbjct: 614 DSVEPYVSNIYTRRALGGEYHIICPHLVQELERRGLWTPHMRRQIIDARGSVQNITTIPD 673
Query: 694 ELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKT 753
LKA+Y+T WE+ Q+ V MAADRG YIDQSQS++++M P L + H Y+W G+KT
Sbjct: 674 RLKAVYRTAWEMPQRYTVIMAADRGPYIDQSQSMSLYMRNPTAAALYTAHMYSWQAGLKT 733
Query: 754 GMYYLRTRAAADAIK 768
GMYYLRT A A++
Sbjct: 734 GMYYLRTTAPTYAMQ 748
>gi|328719872|ref|XP_003246886.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Acyrthosiphon pisum]
Length = 766
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 323/789 (40%), Positives = 478/789 (60%), Gaps = 52/789 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAG-VYKGVTTTQLDEL 59
+YV KRDG E V +D+I AR+K+L YGL K DP A V ++ G+TT+QLD+
Sbjct: 8 LYVQKRDGTIEKVHYDEIIARIKQLCYGLEK--IDPAATAIHVIKKCLFAGITTSQLDDA 65
Query: 60 AAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMY---NYYNKRSGKKASLV 116
AAE A M HPDY LA R+A+SNLHK TK FS+ I D++ +Y+N + +
Sbjct: 66 AAEMAITMATIHPDYEKLAARIAISNLHKQTKEKFSDVIDDIHKNDDYWN-------TGL 118
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSV 176
+DD+YEIIMKN L+ AI Y+ D+ DYFGFK L +++L+K +++ +ERPQH+ M+V+V
Sbjct: 119 SDDIYEIIMKNKDRLNEAINYENDYILDYFGFKYLTQNFLVKSENQTIERPQHLFMKVAV 178
Query: 177 GIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLS----SCFLLCMKDDSIEGIY 232
IH DD DSA++TY ++SQ +P + +L+ S + + M DSI+GIY
Sbjct: 179 SIHGDDIDSAIETYKMLSQK-LCMFSPVVMQLQPAARKLNVSVISHYSVAMIADSIDGIY 237
Query: 233 DTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGK 292
DTL + + + + +H IRA+G+YI G+NG S+G+ ML+ + D+ + + +
Sbjct: 238 DTLNRLSTFILPYSSVAVHVHKIRAAGTYIKGSNGKSSGLPLMLKQY-DSMVHCKETLER 296
Query: 293 RKG--AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
K AIY E WHADI + +D + + + ++ ALW+PD FM RV +D WS
Sbjct: 297 PKSIKGVAIYCELWHADIMKIIDQIRKTTIADIKLKNSQLALWIPDEFMRRVENDQMWSF 356
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV--ISARKLWFEILNSQIETGTPYMLFK 408
P GL D G EF++LY +YE + ++ ++ I A+KLW +I+ SQIETG P +LFK
Sbjct: 357 MSPDHCPGLIDVHGEEFDNLYKEYELKSKSFVMRQIEAKKLWSQIIQSQIETGLPLLLFK 416
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D+CN KSN+ +LGTI+ + + V+F++ +E A C ASI++ ++ + +
Sbjct: 417 DACNAKSNESHLGTIQCAGRNGDTVQFTASDEVATCTTASISVDMFLTSENI-------- 468
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNL----RHRPIGIGI 524
FDF +L E K IT +LNKII+ N+ + + L IGIGI
Sbjct: 469 -----------FDFSKLKETAKKITYDLNKIIENNNVILNKEDQLKLGLKQNQLAIGIGI 517
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
QGLAD FI + PF++ EA+ LN I ETIYY AL+AS ELA K+GPY+TY SP SKG+
Sbjct: 518 QGLADLFIKMRYPFDNKEARYLNIQIHETIYYGALEASCELASKNGPYKTYPNSPTSKGL 577
Query: 585 LQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
LQ D+WN+ PS+ WDW+SL+ I+++G+RNSL+ T S I GN EP +N+
Sbjct: 578 LQFDLWNVKPSNLWDWNSLKTKIAQHGLRNSLVTVTSNTEVESTIFGNVNSIEPLDTNVK 637
Query: 645 TRRVLSG-----EFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
R + G E VVN +LLKDL + LW L +++ GS+ +I+ +P++LK +Y
Sbjct: 638 RRYISLGESKPKEIQVVNPYLLKDLHDRKLWDEKLIPELVNNMGSIQEIN-LPDDLKQLY 696
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
+T WEI QK LV MAADR +IDQSQ+ +++M + + ++ +H W G+KTG+ LR
Sbjct: 697 RTKWEIDQKVLVTMAADRAPFIDQSQAFSLNMVKANEDIISEMHISTWKMGLKTGVCQLR 756
Query: 760 TRAAADAIK 768
+ + ++
Sbjct: 757 IKQTEEDLR 765
>gi|440698861|ref|ZP_20881183.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
turgidiscabies Car8]
gi|440278673|gb|ELP66667.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
turgidiscabies Car8]
Length = 788
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 328/790 (41%), Positives = 456/790 (57%), Gaps = 57/790 (7%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN- 92
DP VA G ++L ELA E AA + P Y+ LA R+ + +
Sbjct: 40 ADPGRVAAAALRGRSARADVSELRELATEAAAGLISEDPAYSRLAARLLTVTVAAEAASQ 99
Query: 93 ---SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
+FSE++ G + L+AD E + + LD I D D F YFG +
Sbjct: 100 GVTTFSESVA---------VGHREGLIADRTAEFVRLHTDRLDALIDVDGDDRFGYFGLR 150
Query: 150 TLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSAL----KTYHLMSQHWFTHATP 203
TL YLL+ + RV+E PQH ++RV+ G+ +DDT AL Y LMS+ + ++P
Sbjct: 151 TLHSRYLLRHPITRRVIETPQHFMLRVASGLAEDDTVRALDEVAALYRLMSRLDYLPSSP 210
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IR+ GS I
Sbjct: 211 TLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIR 270
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G++
Sbjct: 271 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 329
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV 383
R +L A W+PD FM RV D WSLF PSD L D WG EF+ Y EE G A+
Sbjct: 330 RTHNLNLAHWIPDEFMRRVDSDALWSLFSPSDVPELVDLWGAEFDAAYRAAEEAGLARKT 389
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEET 441
I AR L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E + ET
Sbjct: 390 IPARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGSVVHSSNLCTEILEVTDDGET 449
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L +V D+ D+ERL E + L++++D
Sbjct: 450 AVCNLGSVNLGAFV------------------DTAAGDIDWERLDETVRTAVTFLDRVVD 491
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N YP E RSN R RP+G+G GL D F L +PF+SPEA+ L+ I E + A +A
Sbjct: 492 INFYPTEQAGRSNSRWRPVGLGAMGLQDVFFQLRVPFDSPEARALSTRIAERVMLAAYEA 551
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPM 621
SA+LA ++GP + + ++G+L D +++ + WS+LRE I++ G+RNSLL+A
Sbjct: 552 SADLAERNGPLPAWEKTRTARGVLHPDHYDVELNWPERWSALRERIAEVGMRNSLLLAVA 611
Query: 622 PTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYE 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+++L +LG+W + +
Sbjct: 612 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVRELKDLGVWDARTREALRES 671
Query: 682 NGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTS 741
NGSV + IP +++A+Y+T WEI Q+ L+DMAA R ++DQSQSLN+ +E P GKL+S
Sbjct: 672 NGSVQDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTIGKLSS 731
Query: 742 LHFYAWSKGMKTGMYYLRTRAA---ADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCS 798
++ YAW G+KT YYLR+R A A A + TV AD D V CS
Sbjct: 732 MYAYAWKSGLKT-TYYLRSRPATRIARAAQATVPVQ-------QAADPDA------VACS 777
Query: 799 LKNQEECMAC 808
L+N E C AC
Sbjct: 778 LENPESCEAC 787
>gi|328722126|ref|XP_003247490.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Acyrthosiphon pisum]
Length = 767
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 322/788 (40%), Positives = 470/788 (59%), Gaps = 49/788 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAG-VYKGVTTTQLDEL 59
++V KRDG E V +D ITAR+K+L YGL K DP A V +Y G+TT+QLD+
Sbjct: 8 LHVQKRDGTIEKVHYDAITARIKQLCYGLEK--IDPAATAIHVIKKFLYAGITTSQLDDA 65
Query: 60 AAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDM---YNYYNKRSGKKASLV 116
AAETA M HPDY LA R+A+SNLHK TK FS+ I D+ YNY+N +
Sbjct: 66 AAETAITMATIHPDYEKLAARIAISNLHKQTKEKFSDVIDDIHKNYNYWNIG-------L 118
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSV 176
+DD+YEIIMK+ L+ AI Y+ D+ DYFGFK L + +L+K +++ +ERPQH+ M+V+V
Sbjct: 119 SDDIYEIIMKHKDRLNEAINYENDYILDYFGFKYLIQHFLVKSENQTIERPQHLFMKVAV 178
Query: 177 GIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLS----SCFLLCMKDDSIEGIY 232
GIH DD DSA++TY ++SQ +P + +L+ S + + M DSI+GIY
Sbjct: 179 GIHGDDIDSAIETYKMLSQK-LCMFSPVVMQLQPAARKLNVSVISHYSVAMIADSIDGIY 237
Query: 233 DTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQ-GGG 291
DT + + + L +H IRA+G+YI G+ G S+G+ ML+ ++ R +
Sbjct: 238 DTSIRLSSFILPYSSVALHVHKIRAAGTYIQGSYGESSGLPLMLKQYDSIVRNSETLERP 297
Query: 292 KRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLF 351
K IY E WHADI + +D + + + ++ ALW+PD FM RV++D WS
Sbjct: 298 KSIKGVTIYCELWHADIMKVIDQIRMTSIADIKLKNCQLALWIPDEFMRRVQNDQMWSFM 357
Query: 352 CPSDASGLADSWGIEFEHLYSQYEEEGRAKMV--ISARKLWFEILNSQIETGTPYMLFKD 409
P GL D G EF++LY +YE + ++ ++ I A+KLW +I+ SQIETG P +LFKD
Sbjct: 358 SPDHCPGLIDVHGKEFDNLYKEYELKSKSFVMRQIEAKKLWSQIIQSQIETGLPLLLFKD 417
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
+CN KSN+ +LGTI+ + + V+F++ +E A C ASI++ ++ + +
Sbjct: 418 ACNAKSNESHLGTIQCAGRNGDTVQFTASDEVATCTTASISVDMFLTSENI--------- 468
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNL----RHRPIGIGIQ 525
FDF +L E K +T +LNKIID N+ + ++ L IGIG+Q
Sbjct: 469 ----------FDFSKLKETAKKLTYDLNKIIDNNNVILNKEKQLELGLKQNQWAIGIGVQ 518
Query: 526 GLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGIL 585
GLAD FI + PF++ EA+ LN I E+IYY AL+AS ELA +GPY+T+ SP SKG+L
Sbjct: 519 GLADLFIKMKYPFDNKEARVLNTQIHESIYYGALEASCELATTNGPYKTFPNSPTSKGLL 578
Query: 586 QVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYT 645
Q D+WN+ PS+ WDW++L+ I+++G+RNSL+ T S I G EP +N+
Sbjct: 579 QFDLWNVKPSNLWDWNNLKTKITQHGLRNSLVTVTSNTEVESTICGKVNSIEPLDTNVKR 638
Query: 646 RRVLSG-----EFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYK 700
R + G E VVN HLLKDL + LW LK +++ GSV +I +PE+LK +YK
Sbjct: 639 RYISLGESKPKEIQVVNPHLLKDLHDRKLWDDNLKYQLMNNMGSVQEIKGLPEDLKQLYK 698
Query: 701 TVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRT 760
T WEI QK L+ MAADR +IDQSQ+ +++M + D ++ + W G+KT + LR
Sbjct: 699 TKWEIDQKDLIIMAADRAPFIDQSQAFSLNMVKADEDIISEMLISTWKMGLKTAVCQLRI 758
Query: 761 RAAADAIK 768
+ ++
Sbjct: 759 NQTEEHLR 766
>gi|315506489|ref|YP_004085376.1| ribonucleoside-diphosphate reductase subunit alpha [Micromonospora
sp. L5]
gi|315413108|gb|ADU11225.1| ribonucleoside-diphosphate reductase, alpha subunit [Micromonospora
sp. L5]
Length = 798
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 329/816 (40%), Positives = 473/816 (57%), Gaps = 48/816 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KRDG EPV KI +++ L + DP+ VA K +G+Y G TT +LD L+
Sbjct: 22 MRVRKRDGDTEPVDVGKIVRAVERWVADL--DEVDPLRVATKTISGLYDGATTAELDRLS 79
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAA + P Y+ LA R+ + + K + SFS++I + L+
Sbjct: 80 IQTAAELIGEEPQYSKLAARLLAAYVDKEVRGQGVASFSQSIAYAHGL---------GLI 130
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM-DSR-VVERPQHMLMRV 174
D+ + ++A LD A+ D D F+YFG +T+ YLL+ SR VVE PQ+ L+RV
Sbjct: 131 GDETAAFVARHARKLDDAVDPDGDLRFEYFGLRTVADRYLLRHPQSRLVVETPQYWLLRV 190
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ G+ + + A+ Y LMS + ++PTLFN+GT Q+SSCFL+ D ++ IY+
Sbjct: 191 ACGLSRTPGE-AVGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYER 249
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG+S +R G+ I GTNG SNGIVP L+ + V+QGG +RK
Sbjct: 250 YHQVAKLSKFSGGIGISWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRK 308
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLEPWH D+ EFL+LR N G+E R +L A WVPD FM RV DG+WSL PS
Sbjct: 309 GAACVYLEPWHPDVEEFLELRDNTGEESRRTHNLNLANWVPDEFMRRVEADGEWSLVDPS 368
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
DA L D +G F+ Y E+ A + AR L+ ++ + +TG +M FKD+ NR
Sbjct: 369 DAPELPDLYGEAFDAAYRAAEKN--AVRTVRARDLYGRMMRTLAQTGNGWMTFKDAANRL 426
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ + I SNLCTEI+E + ETAVCNL S+ L +V GV
Sbjct: 427 SNQTGEPGNVIHLSNLCTEILEVNDDAETAVCNLGSVNLGAHVTADGV------------ 474
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D+ERL + L+++ID+N+YP E SN R RP+G+G+ GL D F
Sbjct: 475 --------DWERLRATVRTAVVFLDRVIDINYYPAEQAAASNPRWRPVGLGLMGLQDAFF 526
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L LPF+S +A++L+ + E I AL+ SA LA + GP+ Y + +KG L D+W
Sbjct: 527 TLRLPFDSAQAKELSTRVQEEILLTALETSAGLAERFGPHPAYPQTRAAKGDLHPDLWGA 586
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
P+ W++LRE I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 587 EPAQAGRWAALRERIAVHGLRNSLLVAIAPTATIASIAGCYECVEPQVSNLFKRETMSGE 646
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VN +L+++L GLW+ ++ +I GSV I+E+P ++ +++T WE+ Q+ L+D
Sbjct: 647 FLQVNTYLVRELKARGLWTPQVRDRIKRAEGSVQDITELPAPVRELFRTAWELPQRALID 706
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
+AA R ++DQSQSLN+ + P GKL+S++ YAW G+KT YYLR+R A + TV
Sbjct: 707 LAAARAPFVDQSQSLNLFLSAPTIGKLSSMYLYAWKAGLKT-TYYLRSRPATRIQQATVA 765
Query: 773 TSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
+ A +D EA + CSL+N E C AC
Sbjct: 766 PVLAPVSGVVSAVSDDEA----LACSLENPESCEAC 797
>gi|302867101|ref|YP_003835738.1| ribonucleoside-diphosphate reductase subunit alpha [Micromonospora
aurantiaca ATCC 27029]
gi|302569960|gb|ADL46162.1| ribonucleoside-diphosphate reductase, alpha subunit [Micromonospora
aurantiaca ATCC 27029]
Length = 798
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 329/816 (40%), Positives = 473/816 (57%), Gaps = 48/816 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KRDG EPV KI +++ L + DP+ VA K +G+Y G TT +LD L+
Sbjct: 22 MRVRKRDGDTEPVDVGKIVRAVERWVADL--DEVDPLRVATKTISGLYDGATTAELDRLS 79
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAA + P Y+ LA R+ + + K + SFS++I + L+
Sbjct: 80 IQTAAELIGEEPQYSKLAARLLAAYVDKEVRGQGVASFSQSIAYAHGL---------GLI 130
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM-DSR-VVERPQHMLMRV 174
D+ + ++A LD A+ D D F+YFG +T+ YLL+ SR VVE PQ+ L+RV
Sbjct: 131 GDETAGFVARHARKLDDAVDPDGDLRFEYFGLRTVADRYLLRHPQSRLVVETPQYWLLRV 190
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ G+ + + A+ Y LMS + ++PTLFN+GT Q+SSCFL+ D ++ IY+
Sbjct: 191 ACGLSRTPGE-AVGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYER 249
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG+S +R G+ I GTNG SNGIVP L+ + V+QGG +RK
Sbjct: 250 YHQVAKLSKFSGGIGISWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRK 308
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLEPWH D+ EFL+LR N G+E R +L A W+PD FM RV DG+WSL PS
Sbjct: 309 GAACVYLEPWHPDVEEFLELRDNTGEESRRTHNLNLANWIPDEFMRRVEADGEWSLVDPS 368
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
DA L D +G F+ Y E+ A + AR L+ ++ + +TG +M FKD+ NR
Sbjct: 369 DAPELPDLYGEAFDAAYRAAEKN--AVRTVRARDLYGRMMRTLAQTGNGWMTFKDAANRL 426
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ + I SNLCTEI+E + ETAVCNL S+ L +V GV
Sbjct: 427 SNQTGEPGNVIHLSNLCTEILEVNDDAETAVCNLGSVNLGAHVTADGV------------ 474
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D+ERL + L+++ID+N+YP E SN R RP+G+G+ GL D F
Sbjct: 475 --------DWERLRATVRTAVVFLDRVIDINYYPAEQAAASNPRWRPVGLGLMGLQDAFF 526
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L LPF+S +A++L+ + E I AL+ SA LA + GP+ Y + +KG L D+W
Sbjct: 527 TLRLPFDSAQAKELSTRVQEEILLTALETSAGLAERFGPHPAYPQTRAAKGDLHPDLWGA 586
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
P+ W++LRE I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 587 EPAQAGRWAALRERIAVHGLRNSLLVAIAPTATIASIAGCYECVEPQVSNLFKRETMSGE 646
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VN +L+++L GLW+ ++ +I GSV I+E+P ++ +++T WE+ Q+ L+D
Sbjct: 647 FLQVNTYLVRELKARGLWTPQVRDRIKRAEGSVQDITELPAPVRELFRTAWELPQRALID 706
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
+AA R +IDQSQSLN+ + P GKL+S++ YAW G+KT YYLR+R A + TV
Sbjct: 707 LAAARAPFIDQSQSLNLFLSAPTIGKLSSMYLYAWKAGLKT-TYYLRSRPATRIQQATVA 765
Query: 773 TSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
+ A +D EA + CSL+N E C AC
Sbjct: 766 PVLAPVSGVVSAVSDDEA----LACSLENPESCEAC 797
>gi|443290855|ref|ZP_21029949.1| Ribonucleoside-diphosphate reductase large chain [Micromonospora
lupini str. Lupac 08]
gi|385886410|emb|CCH18023.1| Ribonucleoside-diphosphate reductase large chain [Micromonospora
lupini str. Lupac 08]
Length = 797
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 319/814 (39%), Positives = 467/814 (57%), Gaps = 48/814 (5%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V KRDG EPV K+ A +++ + L DP+ VA + +G+Y G TT +LD L +
Sbjct: 23 VRKRDGASEPVDVRKLAATVERWADDLPD--VDPLRVATRTISGLYDGATTAELDRLTIQ 80
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITK----NSFSETIKDMYNYYNKRSGKKASLVAD 118
TAA + P Y+ LA R+ S++ + + SFS I R+G L+ D
Sbjct: 81 TAAELIGTEPQYSRLAARLLASHVEREVRRQGVTSFSAAI---------RAGHAQGLIGD 131
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSR--VVERPQHMLMRVSV 176
+ + + LD A+ D D F+YFG +T+ YLL+ + V+E PQ+ L+RV+
Sbjct: 132 ETAAFVAAHGRALDDAVDADGDRRFEYFGLRTVYDRYLLRHPTTRLVLETPQYWLLRVAC 191
Query: 177 GIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLK 236
G+ + D A+ Y LMS + ++PTLFNAGT Q+SSC+L+ D ++ IY
Sbjct: 192 GLSRT-PDEAVDFYRLMSSLAYLPSSPTLFNAGTRHTQMSSCYLVDSPRDELDSIYQRYA 250
Query: 237 KCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGA 296
+ A +SK AGGIG++ +R+ G+ I GTNG SNGIVP L+ + + V+QGG +RKGA
Sbjct: 251 QVANLSKFAGGIGIAYSRVRSRGALIRGTNGQSNGIVPWLRTLDASVAAVNQGG-RRKGA 309
Query: 297 FAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDA 356
+YLEPWH DI EFL LR N G++ R +L A W+PD FM RV D WSLF P +
Sbjct: 310 ACVYLEPWHPDIEEFLQLRDNTGEDARRTHNLNLANWIPDEFMRRVEADEVWSLFDPDEV 369
Query: 357 SGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSN 416
L D WG F+ Y E +GR + AR+L+ +++ + +TG +M FKD+ NR N
Sbjct: 370 PELPDLWGERFDAAYRAAEAQGRYVRQLPARELYGKMMRTLAQTGNGWMTFKDAANRLCN 429
Query: 417 Q--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRD 474
Q + + SNLCTEIVE SS ETAVCNL S+ + ++ + G+
Sbjct: 430 QTAEPGNVVHLSNLCTEIVEVSSDAETAVCNLGSVNVAAHLTDDGI-------------- 475
Query: 475 SKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILL 534
D+ RL + L+++ID+N+YP SN R RP+G+G+ GL D F L
Sbjct: 476 ------DWPRLRATVRTAVTFLDRVIDINYYPTPQAAASNPRWRPVGLGLMGLQDVFFAL 529
Query: 535 GLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP 594
LPF+SP A++L+ I E +Y AL+ SA+LA G + Y + ++G LQ D+W +
Sbjct: 530 RLPFDSPAARELSTRISEELYLTALETSADLARDFGAHPAYAQTRAARGQLQPDLWGVDG 589
Query: 595 SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFI 654
+ W++LR+ + G+RNSLLVA PTA+ + I G EC EP SN++ R LSGEF+
Sbjct: 590 TQTARWAALRQRVGAYGLRNSLLVAVAPTATIASIAGCYECVEPQVSNLFKRETLSGEFL 649
Query: 655 VVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMA 714
VN L+++L GLW+ +++ I GSV ++E+P +++ +++T WE+ Q+ L+D+A
Sbjct: 650 QVNTALVRELKARGLWTEQIRSAIRRAEGSVQDVTELPADVRELFRTAWELPQRALIDLA 709
Query: 715 ADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTS 774
A R +IDQSQSLN+ + P GKL+S++ YAW G+KT YYLR+R A + TV S
Sbjct: 710 AARAPFIDQSQSLNLFLASPTIGKLSSMYLYAWKTGLKT-TYYLRSRPATRIQQATV--S 766
Query: 775 VLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
+ D EA + CSL+N E C AC
Sbjct: 767 AVTPVAVGPVAVDAEA----LACSLENPESCEAC 796
>gi|383777026|ref|YP_005461592.1| putative ribonucleoside-diphosphate reductase large subunit
[Actinoplanes missouriensis 431]
gi|381370258|dbj|BAL87076.1| putative ribonucleoside-diphosphate reductase large subunit
[Actinoplanes missouriensis 431]
Length = 786
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 324/816 (39%), Positives = 472/816 (57%), Gaps = 54/816 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G EPV +KI +++ L + DP+ VA K +G+Y G TT +LD+L+
Sbjct: 16 MQVRKRNGETEPVDVNKIVTAVERWVADL--DEVDPLRVATKTISGLYDGATTAELDKLS 73
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAA + P Y+ LA R+ + + + + FSE+I R G + L+
Sbjct: 74 IQTAAELIGEEPQYSRLAARLLAAFVEQEVREEGVAGFSESI---------RLGHQQGLI 124
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSR--VVERPQHMLMRV 174
+D+ + ++A LD AI + F+YFG +T+ YLL+ ++ V+E PQH L+RV
Sbjct: 125 SDETAAFVAEHATVLDQAIDDANNLRFEYFGLRTVADRYLLRHPTKRTVIETPQHWLLRV 184
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ G+ + + A+ Y LMS + ++PTLFN+GT Q+SSCFL+ D ++ IY+
Sbjct: 185 ACGLSETPGE-AIGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPKDELDSIYER 243
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG+S +R G+ I GTNG SNGIVP L+ + V+QGG +RK
Sbjct: 244 YHQVAKLSKFSGGIGISWSRVRGRGALIRGTNGKSNGIVPFLKTLDAGVAAVNQGG-RRK 302
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLEPWH DI EFL+LR N G+E R +L A W+PD FM RV D WSL PS
Sbjct: 303 GAACVYLEPWHPDIEEFLELRDNTGEESRRTHNLNLANWIPDEFMRRVEADEDWSLIDPS 362
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
DA L D +G EF Y E+ A I AR L+ ++ + +TG +M FKD NR
Sbjct: 363 DAPMLPDLFGDEFTEAYRAAEKN--AVKTIKARDLYGRMMRTLAQTGNGWMTFKDPSNRL 420
Query: 415 SNQQNL--GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ I SNLCTEI+E ++ ETAVCNL S+ L +V GV
Sbjct: 421 SNQTGAPGNVIHLSNLCTEILEVNNDAETAVCNLGSVNLGAHVTADGV------------ 468
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D+E+L E + L+++ID+N+YP + SN R RP+G+G+ GL D F
Sbjct: 469 --------DWEKLRETVRTAVVFLDRVIDINYYPAQQAAASNPRWRPVGLGLMGLQDAFF 520
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L LPF+S EA++L+ + E I+ AL++SA LA + GP+ Y + +KG L +W
Sbjct: 521 TLRLPFDSAEARELSTRVQEEIFLTALESSAALAERFGPHPAYPETRAAKGDLHPYLWGA 580
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
PS W++++E I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 581 EPSQNARWAAVKERIAAHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGE 640
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ +N +L+++L LW+ ++ I GSV I+E+P +++ +++T WE+ Q+ L+D
Sbjct: 641 FLQINTYLVRELKSRNLWTAGIREAIKRAEGSVQGIAELPADVRELFRTAWELPQRALID 700
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
+AA R YIDQSQSLN+ M P GK++S++ YAW G+KT YYLR+R A + TV
Sbjct: 701 LAAARAPYIDQSQSLNLFMAAPTIGKVSSMYLYAWKAGLKTS-YYLRSRPATRIQQATVS 759
Query: 773 TSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
A + + A VCSL+N E C AC
Sbjct: 760 V----------APSVIPALTPAEVCSLENPESCEAC 785
>gi|443624322|ref|ZP_21108796.1| putative Ribonucleoside-diphosphate reductase [Streptomyces
viridochromogenes Tue57]
gi|443342236|gb|ELS56404.1| putative Ribonucleoside-diphosphate reductase [Streptomyces
viridochromogenes Tue57]
Length = 776
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 323/787 (41%), Positives = 451/787 (57%), Gaps = 47/787 (5%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN- 92
DP VA G T+L ELA E AA + P Y+ LA R+ ++ +
Sbjct: 24 ADPGRVAAAALRGRSARADETELRELATEAAAGLISEDPAYSRLAARLLTISIAAEAASQ 83
Query: 93 ---SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
SF+E++ G + L+AD E + +AA LD I D F YFG +
Sbjct: 84 GVTSFTESVA---------VGHREGLIADRTAEFVRVHAARLDALIDTGADDRFGYFGLR 134
Query: 150 TLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT----DSALKTYHLMSQHWFTHATP 203
TL YLL+ + +V+E PQH ++RV+ G+ +DDT D Y LMS+ + ++P
Sbjct: 135 TLHSRYLLRHPLTRKVIETPQHFMLRVAAGLAEDDTARSVDEVAALYGLMSRLDYLPSSP 194
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IR+ GS I
Sbjct: 195 TLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIR 254
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G++
Sbjct: 255 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 313
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV 383
R +L A WVPD FM RV DG+WSLF P+D L D WG EF+ Y + EE G A+
Sbjct: 314 RTHNLNLAHWVPDEFMRRVNADGQWSLFSPADVPELVDLWGEEFDAAYRKAEEAGLARKT 373
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG--TIKSSNLCTEIVEFSSPEET 441
I AR L+ ++ + +TG +M FKD+ NR +NQ L + SSNLCTEI+E + ET
Sbjct: 374 IPARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTALPGHVVHSSNLCTEILEVTDDGET 433
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L +V D + D+ERL + L++++D
Sbjct: 434 AVCNLGSVNLGAFV------------------DPARQDIDWERLDATVRTAVTFLDRVVD 475
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N YP E RSN + RP+G+G GL D F L LPF+S EA++L+ I E I A +A
Sbjct: 476 INFYPTEQAGRSNAKWRPVGLGAMGLQDVFFKLRLPFDSAEAKRLSTRIAERIMLAAYEA 535
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPM 621
SA+LA + GP + + ++G+L D +++ + W++LR I+ G+RNSLL+A
Sbjct: 536 SADLAERGGPLPAWEKTRTARGVLHPDHYDVELTWPERWAALRSRIATTGMRNSLLLAIA 595
Query: 622 PTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYE 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L LG+W + +
Sbjct: 596 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDELKALGVWDARTREALRES 655
Query: 682 NGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTS 741
NGSV + IP +++A+Y+T WEI Q+ L+DMAA R ++DQSQSLN+ ME P GKL+S
Sbjct: 656 NGSVQDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFMETPTIGKLSS 715
Query: 742 LHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKN 801
++ YAW +G+KT YYLR+R A + + A D V CSL+N
Sbjct: 716 MYAYAWKQGLKT-TYYLRSRPATRIARAAQAQAQATIPVQQPAPEDA------VACSLEN 768
Query: 802 QEECMAC 808
E C AC
Sbjct: 769 PESCEAC 775
>gi|398782656|ref|ZP_10546370.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
auratus AGR0001]
gi|396996720|gb|EJJ07706.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
auratus AGR0001]
Length = 800
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 330/793 (41%), Positives = 458/793 (57%), Gaps = 51/793 (6%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN-- 92
DP VA G + G +L LA + AA + + P Y+ LA R+ + +
Sbjct: 39 DPGKVAAAALRGRHAGSDEAELRSLATDAAAGLIGDEPQYSKLAARLLTLAIAEEAAGQG 98
Query: 93 --SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDG----AIIYDRDFDFDYF 146
SFS ++ +G + L+AD+ E + + A LD A+ D F YF
Sbjct: 99 AVSFSASVA---------TGHREGLIADETAEFVRTHEARLDALVERALADGADDRFGYF 149
Query: 147 GFKTLERSYLLKMDS--RVVERPQHMLMRVSVGIHKDDTDSAL----KTYHLMSQHWFTH 200
G +TL YLL+ + +V+E PQH L+RV+ G+ +D + AL + Y L S +
Sbjct: 150 GLRTLHSRYLLRHPTTRQVIETPQHFLLRVACGLAEDHGERALDDVAELYRLTSSLAYLP 209
Query: 201 ATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGS 260
++PTLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IRA GS
Sbjct: 210 SSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 269
Query: 261 YIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGK 320
I GTNG SNGIVP L+ + + V+QGG +RKGA +YLE WHAD+ EFL+LR N G+
Sbjct: 270 LIRGTNGHSNGIVPFLRTLDASVAAVNQGG-RRKGAACVYLETWHADLEEFLELRDNTGE 328
Query: 321 EECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRA 380
E R +L A W+PD FM RV D WSLF PSDA L D WG +F+ Y + E EGRA
Sbjct: 329 EARRTHNLNIAHWIPDEFMRRVEADADWSLFSPSDAPELVDLWGEQFDAAYRRAEAEGRA 388
Query: 381 KMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSP 438
I AR L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E ++
Sbjct: 389 VKQIPARVLYSRMMRTLAQTGNGWMTFKDTANRTANQTAEPGQVVHSSNLCTEILEVTND 448
Query: 439 EETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNK 498
ETAVCNL S+ L + L D+ERL + L++
Sbjct: 449 GETAVCNLGSVNL--------------AAHLGNDAGGWEEAMDWERLDATVRTAVTFLDR 494
Query: 499 IIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHA 558
++D+N YP E SN R RP+G+G+ GL D F L LPF+SPEAQ+L+ I E I A
Sbjct: 495 VVDINFYPTEQAGASNSRWRPVGLGLMGLQDVFFRLRLPFDSPEAQELSTRISERIMLAA 554
Query: 559 LKASAELAVKDGPYETYFGSPMSKGILQVDMW-NITPSDRW--DWSSLREMISKNGVRNS 615
+ASA+LA + GP+ + + ++G+L D + N P RW W++LR I+ G+RNS
Sbjct: 555 YEASADLAERHGPHPAWSATRTARGVLHPDHYPNAEP--RWADRWAALRSRIALTGMRNS 612
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALK 675
LL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+++L LGLW +
Sbjct: 613 LLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLIEELKALGLWDARTR 672
Query: 676 TKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPD 735
+ NGSV ++ IPEE++A+Y+T WEI Q+ L+DMAA R Y+DQSQSLN+ M P
Sbjct: 673 DALREANGSVQDVAWIPEEIRALYRTAWEIPQRALIDMAAARTPYLDQSQSLNLFMASPT 732
Query: 736 HGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQV 795
GKL+S++ YAW +G+KT YYLR+R A + T+ + +A D EA V
Sbjct: 733 IGKLSSMYAYAWKRGIKT-TYYLRSRPATRIAQSARGTAAASAPVPQQA-ADPEA----V 786
Query: 796 VCSLKNQEECMAC 808
CSL+N E C AC
Sbjct: 787 ACSLENPESCEAC 799
>gi|290957505|ref|YP_003488687.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
scabiei 87.22]
gi|260647031|emb|CBG70130.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
scabiei 87.22]
Length = 802
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 325/795 (40%), Positives = 455/795 (57%), Gaps = 56/795 (7%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQ----LDELAAETAAAMTVNHPDYALLAGRVAVSNLHKI 89
DP VA G T + L ELA E AA + P Y+ LA R+ +
Sbjct: 43 ADPGRVAAAALRGRSSRAATAEMVAELRELATEAAAGLISEDPAYSKLAARLLAIGIRAE 102
Query: 90 TKN----SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDY 145
+ +F+E+I G + LVAD E + + A LD + D F Y
Sbjct: 103 AASQGVTTFTESIA---------VGHREGLVADRTAEFVRVHGARLDALVDPAGDDRFGY 153
Query: 146 FGFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFT 199
FG +TL YLL+ + +VVE PQH ++RV+ G+ +DDT A+ Y LMS+ +
Sbjct: 154 FGLRTLHSRYLLRHPLTRKVVETPQHFMLRVASGLAEDDTPRAVDEVSALYGLMSRLDYL 213
Query: 200 HATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASG 259
++PTLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IR+ G
Sbjct: 214 PSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRG 273
Query: 260 SYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQG 319
S I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G
Sbjct: 274 SLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTG 332
Query: 320 KEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGR 379
++ R +L A W+PD FM RV D +WSLF P+D L D WG EFE Y + E G
Sbjct: 333 EDARRTHNLNLAHWIPDEFMRRVNADEQWSLFSPADVPELVDLWGEEFEAAYRKAEANGL 392
Query: 380 AKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSS 437
A+ I+AR L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E +
Sbjct: 393 ARKTIAARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHSSNLCTEILEVTD 452
Query: 438 PEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLN 497
ETAVCNL S+ L +V D D+ERL E + L+
Sbjct: 453 DGETAVCNLGSVNLGAFV------------------DRAAGDLDWERLDETVRTAVTFLD 494
Query: 498 KIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYH 557
+++D+N YP E RSN R RP+G+G GL D F L LPF+SPEA+ L+ I E I
Sbjct: 495 RVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSPEAKALSTRIAERIMLA 554
Query: 558 ALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLL 617
A +ASA+LA ++GP + + ++G+L D + + P+ W++LRE ++ G+RN+LL
Sbjct: 555 AYEASADLAERNGPLPAWEKTRTARGVLHPDHYGVEPAWSERWAALRERVAATGMRNALL 614
Query: 618 VAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTK 677
+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L++DL ELG+W +
Sbjct: 615 LAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVRDLKELGVWDARTREA 674
Query: 678 IIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHG 737
+ NGSV + IP +++A+Y+T WEI Q+ L+DMAA R Y+DQSQSLN+ +E P G
Sbjct: 675 LRDSNGSVQDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPYLDQSQSLNLFLETPTIG 734
Query: 738 KLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLA---- 793
KL+S++ YAW G+KT YYLR+R A + +A + + V A
Sbjct: 735 KLSSMYAYAWKSGLKT-TYYLRSRPATRIARAA-------QGQARQPETTVPVQQATSEE 786
Query: 794 QVVCSLKNQEECMAC 808
+ CSL+N E C AC
Sbjct: 787 ALACSLENPESCEAC 801
>gi|418471849|ref|ZP_13041639.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
coelicoflavus ZG0656]
gi|371547526|gb|EHN75896.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
coelicoflavus ZG0656]
Length = 791
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 325/807 (40%), Positives = 462/807 (57%), Gaps = 51/807 (6%)
Query: 16 DKITARLKKLSYGLSKE--HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPD 73
D A L + GL+ + DP VA G +L ELA E AA + P
Sbjct: 21 DGPGAALLRTLTGLTADLPGADPGRVAAAALRGRSAHADEAELRELATEAAAGLISEDPV 80
Query: 74 YALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAA 129
Y+ LA R+ + + +F++++ +G + L+AD + +AA
Sbjct: 81 YSRLAARLLTIGIRAEAASQGVVAFTDSVA---------TGHREGLIADRTAAFVRLHAA 131
Query: 130 CLDGAIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT---- 183
LD + D F YFG +TL YLL+ + + VE PQH L+RV+ G+ +DDT
Sbjct: 132 RLDALVDPAADDRFGYFGLRTLYSRYLLRHPITRKTVETPQHFLLRVAAGLAEDDTVRSV 191
Query: 184 DSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISK 243
D Y LMS+ + ++PTLFN+GT Q+SSC+LL D ++ +YD L + A +SK
Sbjct: 192 DEVAALYGLMSRLDYLPSSPTLFNSGTRHAQMSSCYLLDSPKDELDSLYDRLHQVARLSK 251
Query: 244 SAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEP 303
AGGIG++ +RA GS I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE
Sbjct: 252 HAGGIGIAYSRVRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLET 310
Query: 304 WHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSW 363
WHAD+ EFL+LR N G++ R +L A W+PD FM RV DG WSLF P+D L D W
Sbjct: 311 WHADVEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVDTDGTWSLFSPADVPELTDLW 370
Query: 364 GIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG-- 421
G EF+ Y + EE G A+ + AR+L+ ++ + +TG +M FKD+ NR +NQ
Sbjct: 371 GEEFDAAYRRAEEAGLARRTLPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTATPGH 430
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
+ SSNLCTEI+E + ETAVCNL S+ L +V P Q ++ D
Sbjct: 431 VVHSSNLCTEILEVTDDGETAVCNLGSVNLGAFVD----PAQGDM--------------D 472
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
+ERL + L++++D+N YP E RSN R RP+G+G GL D F L LPF+SP
Sbjct: 473 WERLDATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSP 532
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWS 601
EA+ L+ I E I A + SA+LA +DGP + + ++G+L D + + P+ W+
Sbjct: 533 EAKALSTRIAERIMLAAYETSADLAERDGPLPAWEKTRTAQGVLHPDHYGVEPAWPERWT 592
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
+LR ++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+
Sbjct: 593 ALRARMATTGLRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLV 652
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
DL LG+W + + NGSV S IPE+++A+Y+T WEI Q+ L+DMAA R Y+
Sbjct: 653 DDLKRLGVWDARTREALREANGSVQGFSWIPEDVRALYRTAWEIPQRGLIDMAAARTPYL 712
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
DQ+QSLN+ +E P GKL+S++ YAW +G+KT YYLR+R A + + + + A
Sbjct: 713 DQAQSLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAAGRATAVPVQAA 771
Query: 782 NRADNDVEANLAQVVCSLKNQEECMAC 808
D EA V CSL+N E C AC
Sbjct: 772 ----PDPEA----VACSLENPESCEAC 790
>gi|330467633|ref|YP_004405376.1| ribonucleoside-diphosphate reductase subunit alpha [Verrucosispora
maris AB-18-032]
gi|328810604|gb|AEB44776.1| ribonucleoside-diphosphate reductase, alpha subunit [Verrucosispora
maris AB-18-032]
Length = 791
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 324/816 (39%), Positives = 477/816 (58%), Gaps = 50/816 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G EPV +KI +++ L + DP+ VA K +G+Y G TT +LD+L+
Sbjct: 17 MQVRKRNGDTEPVDVNKIVKAVERWVTDL--DEIDPLRVATKTISGLYDGATTAELDKLS 74
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAA + P Y+ LA R+ + + K + SFS++I+ + L+
Sbjct: 75 IQTAAELIGEEPQYSRLAARLLAAFVDKEVRGQQVASFSQSIRYAHGL---------GLI 125
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRV 174
D + +NA LD A+ D F+YFG +T+ YLL+ +VVE PQ+ L+RV
Sbjct: 126 GDATAAFVARNARKLDDAVDPAGDLRFEYFGLRTVADRYLLRHPQTRQVVETPQYWLLRV 185
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ G+ + + A+ Y LMS + ++PTLFN+GT Q+SSCFL+ D ++ IY+
Sbjct: 186 ACGLSQTPGE-AIGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYER 244
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG+S +R G+ I GTNG SNGIVP L+ + V+QGG +RK
Sbjct: 245 YHQVAKLSKFSGGIGISWTRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRK 303
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLEPWH DI EFL+LR N G+E R +L A W+PD FM RV DG WSL PS
Sbjct: 304 GAACVYLEPWHPDIEEFLELRDNTGEESRRTHNLNLANWIPDEFMRRVEADGDWSLIDPS 363
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
DA L D +G F+ Y E+ +A + AR L+ ++ + +TG +M FKD+ NR
Sbjct: 364 DAPELPDLYGEAFDEAYRAAEK--KAVRTVKARDLYGRMMRTLAQTGNGWMTFKDAANRL 421
Query: 415 SNQQNL--GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ TI SNLCTEI+E ++ ETAVCNL SI L ++ G+
Sbjct: 422 SNQTGAPGNTIHLSNLCTEILEVNNDTETAVCNLGSINLAAHLTADGI------------ 469
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D+E+L + L+++ID+N+YP + SN R RP+G+G+ GL D F
Sbjct: 470 --------DWEKLRATVRTAVLFLDRVIDINYYPAQQAAASNPRWRPVGLGLMGLQDAFF 521
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L +PF+S A++L+ + E I AL+ SA+LA + GP+ Y + ++G L D+W
Sbjct: 522 TLRMPFDSTPARELSSRVQEEILLTALETSAQLAQQFGPHPAYDDTRAARGELHPDLWGA 581
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
+ W++LRE I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 582 DLTQAQRWAALRETIAAHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGE 641
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ +N +L+++L GLW+ +++ +I GSV I+E+PE+++ +++T WE+ Q+ L+D
Sbjct: 642 FLQINTYLVRELKARGLWTASIREQIKRAEGSVQGIAELPEDVRQLFRTAWELPQRALID 701
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVD 772
+AA R +IDQSQSLN+ + P GKL+S++ YAW G+KT YYLR+R A + TV
Sbjct: 702 LAAARAPFIDQSQSLNLFISAPTIGKLSSMYLYAWKSGLKT-TYYLRSRPATRIQQATV- 759
Query: 773 TSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
+V A A D EA + CSL+N E C AC
Sbjct: 760 -AVTPAAPAIVAVGDDEA----LACSLENPESCEAC 790
>gi|359149119|ref|ZP_09182183.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. S4]
Length = 791
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 321/786 (40%), Positives = 449/786 (57%), Gaps = 47/786 (5%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN-- 92
DP VA G +L LA E AA + P Y+ LA R+ + +
Sbjct: 40 DPGRVAAAALRGRNAASDEAELRSLATEAAAGLISEDPAYSRLAARLLTRTIAEEAAGQG 99
Query: 93 --SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKT 150
+F+E++ +G + L+AD + +A LD + D F YFG +T
Sbjct: 100 VTTFTESVA---------TGHREGLIADRTAAFVTAHAERLDALVDPAADDRFGYFGLRT 150
Query: 151 LERSYLLKMD--SRVVERPQHMLMRVSVGIHKDDTDSAL----KTYHLMSQHWFTHATPT 204
+ YLL+ +V+E PQH ++RV+ G+ +DD+ AL Y LMS + ++PT
Sbjct: 151 VHSRYLLRHPHTRQVIETPQHFMLRVACGLAEDDSVRALDEVASLYRLMSALSYLPSSPT 210
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT PQ+SSC+LL D +E IYD + A +SK AGGIGL+ IRA GS I G
Sbjct: 211 LFNSGTRHPQMSSCYLLDSPKDELESIYDRYHQVARLSKHAGGIGLAYSRIRARGSLIRG 270
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG SNGIVP L + + V+QGG +RKGA A+YLE WHADI EFL+LR N G+E R
Sbjct: 271 TNGHSNGIVPFLNTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEEARR 329
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVI 384
+L A W+PD FM RV D WSLF PSD L D WG F+ Y E +G A+ I
Sbjct: 330 THNLNLAHWIPDEFMRRVDADADWSLFSPSDVPELTDLWGDAFDAAYRAAEAQGLARRTI 389
Query: 385 SARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG--TIKSSNLCTEIVEFSSPEETA 442
AR+L+ ++ + +TG +M FKD+ NR +NQ L T+ SSNLCTEI+E + ETA
Sbjct: 390 PARELYGRMMRTLAQTGNGWMTFKDASNRTANQTALPGHTVHSSNLCTEILEVTDDGETA 449
Query: 443 VCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDV 502
VCNL S+ L +V + D+ERL E + L++++D+
Sbjct: 450 VCNLGSVNLGAFVDGGAI--------------------DWERLDEAVRTAVVFLDRVVDI 489
Query: 503 NHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKAS 562
N YP E RSN R RP+G+G GL D F L LPF+SPEAQ+L+ I E I A + S
Sbjct: 490 NFYPTEQAERSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEAQRLSTRIAERIMLTAYETS 549
Query: 563 AELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMP 622
+LA K+GP + + ++G+L D ++ + W +LR ++++G+RN+LL+A P
Sbjct: 550 CDLAEKNGPLPNWDRTRTAQGVLHPDHYDTDLAWPERWEALRARVAESGMRNALLLAIAP 609
Query: 623 TASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYEN 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L++DL LG+W + + +
Sbjct: 610 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVEDLKRLGVWDARTREALREAS 669
Query: 683 GSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSL 742
GSV + IPEEL+A+Y+T WE+ Q+ L+DMAA R ++DQSQSLN+ ME P GKL+S+
Sbjct: 670 GSVQGFAWIPEELRALYRTAWELPQRGLIDMAAARTPFLDQSQSLNLFMETPTIGKLSSM 729
Query: 743 HFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQ 802
+ YAW KG+KT YYLR+R A + ++ +A D EA + CSL+N
Sbjct: 730 YAYAWKKGLKT-TYYLRSRPATRIARAAGGSAPATATVPAQAAPDAEA----IACSLENP 784
Query: 803 EECMAC 808
E C AC
Sbjct: 785 ESCEAC 790
>gi|291454053|ref|ZP_06593443.1| ribonucleotide-diphosphate reductase subunit large [Streptomyces
albus J1074]
gi|291357002|gb|EFE83904.1| ribonucleotide-diphosphate reductase subunit large [Streptomyces
albus J1074]
Length = 791
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 320/786 (40%), Positives = 448/786 (56%), Gaps = 47/786 (5%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITK--- 91
DP VA G +L LA E AA + P Y+ LA R+ + +
Sbjct: 40 DPGRVAAAALRGRNAASDEAELRSLATEAAAGLISEDPAYSRLAARLLTRTIAEEAAGQG 99
Query: 92 -NSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKT 150
+F+E++ +G + L+AD + +A LD + D F YFG +T
Sbjct: 100 VTTFTESVA---------TGHREGLIADRTAAFVTAHAERLDALVDPAADDRFGYFGLRT 150
Query: 151 LERSYLLKMD--SRVVERPQHMLMRVSVGIHKDDTDSAL----KTYHLMSQHWFTHATPT 204
+ YLL+ +V+E PQH ++RV+ G+ +DD+ AL Y LMS + ++PT
Sbjct: 151 VHSRYLLRHPHTRQVIETPQHFMLRVACGLAEDDSARALDEVASLYRLMSALSYLPSSPT 210
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT PQ+SSC+LL D +E IYD + A +SK AGGIGL+ IRA GS I G
Sbjct: 211 LFNSGTRHPQMSSCYLLDSPKDELESIYDRYHQVARLSKHAGGIGLAYSRIRARGSLIRG 270
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG SNGIVP L + + V+QGG +RKGA A+YLE WHAD+ EFL+LR N G+E R
Sbjct: 271 TNGHSNGIVPFLNTLDASVAAVNQGG-RRKGAAAVYLETWHADVEEFLELRDNTGEEARR 329
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVI 384
+L A W+PD FM RV D WSLF PSD L D WG F+ Y E G A+ I
Sbjct: 330 THNLNLAHWIPDEFMRRVDADADWSLFSPSDVPELTDLWGDAFDAAYRAAEARGLARRTI 389
Query: 385 SARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG--TIKSSNLCTEIVEFSSPEETA 442
AR+L+ ++ + +TG +M FKD+ NR +NQ L T+ SSNLCTEI+E + ETA
Sbjct: 390 PARELYGRMMRTLAQTGNGWMTFKDASNRTANQTALPGHTVHSSNLCTEILEVTDDGETA 449
Query: 443 VCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDV 502
VCNL S+ L +V + D+ERL E + L++++D+
Sbjct: 450 VCNLGSVNLGAFVDGGAI--------------------DWERLDEAVRTAVVFLDRVVDI 489
Query: 503 NHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKAS 562
N YP E RSN R RP+G+G GL D F L LPF+SPEAQ+L+ I E I A + S
Sbjct: 490 NFYPTEQAERSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEAQRLSTRIAERIMLTAYETS 549
Query: 563 AELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMP 622
+LA K+GP + + ++G+L D ++ + W +LR ++++G+RN+LL+A P
Sbjct: 550 CDLAEKNGPLPNWDRTRTAQGVLHPDHYDTDLAWPERWEALRARVAESGMRNALLLAIAP 609
Query: 623 TASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYEN 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L++DL LG+W + + +
Sbjct: 610 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVEDLKRLGVWDARTREALREAS 669
Query: 683 GSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSL 742
GSV + IPEEL+A+Y+T WE+ Q+ L+DMAA R ++DQSQSLN+ ME P GKL+S+
Sbjct: 670 GSVQGFAWIPEELRALYRTAWELPQRGLIDMAAARTPFLDQSQSLNLFMETPTIGKLSSM 729
Query: 743 HFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQ 802
+ YAW KG+KT YYLR+R A + ++ +A D EA + CSL+N
Sbjct: 730 YAYAWKKGLKT-TYYLRSRPATRIARAAGGSAPATATVPAQAAPDAEA----IACSLENP 784
Query: 803 EECMAC 808
E C AC
Sbjct: 785 ESCEAC 790
>gi|421744324|ref|ZP_16182312.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SM8]
gi|406687276|gb|EKC91309.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SM8]
Length = 791
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 320/786 (40%), Positives = 448/786 (56%), Gaps = 47/786 (5%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN-- 92
DP VA G +L LA E AA + P Y+ LA R+ + +
Sbjct: 40 DPGRVAAAALRGRNAASDEAELRSLATEAAAGLISEDPAYSRLAARLLTRTIAEEAAGQG 99
Query: 93 --SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKT 150
+F+E++ +G + L+AD + +A LD + D F YFG +T
Sbjct: 100 VTTFTESVA---------TGHREGLIADRTAAFVTAHAERLDALVDPAADDRFGYFGLRT 150
Query: 151 LERSYLLKMD--SRVVERPQHMLMRVSVGIHKDDTDSAL----KTYHLMSQHWFTHATPT 204
+ YLL+ +V+E PQH ++RV+ G+ +DD+ AL Y LMS + ++PT
Sbjct: 151 VHSRYLLRHPHTRQVIETPQHFMLRVACGLAEDDSARALDEVASLYRLMSALSYLPSSPT 210
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT PQ+SSC+LL D +E IYD + A +SK AGGIGL+ IRA GS I G
Sbjct: 211 LFNSGTRHPQMSSCYLLDSPKDELESIYDRYHQVARLSKHAGGIGLAYSRIRARGSLIRG 270
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG SNGIVP L + + V+QGG +RKGA A+YLE WHAD+ EFL+LR N G+E R
Sbjct: 271 TNGHSNGIVPFLNTLDASVAAVNQGG-RRKGAAAVYLETWHADVEEFLELRDNTGEEARR 329
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVI 384
+L A W+PD FM RV D WSLF PSD L D WG F+ Y E G A+ I
Sbjct: 330 THNLNLAHWIPDEFMRRVDADADWSLFSPSDVPELTDLWGDAFDAAYRAAEARGLARRTI 389
Query: 385 SARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG--TIKSSNLCTEIVEFSSPEETA 442
AR+L+ ++ + +TG +M FKD+ NR +NQ L T+ SSNLCTEI+E + ETA
Sbjct: 390 PARELYGRMMRTLAQTGNGWMTFKDASNRTANQTALPGHTVHSSNLCTEILEVTDDGETA 449
Query: 443 VCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDV 502
VCNL S+ L +V + D+ERL E + L++++D+
Sbjct: 450 VCNLGSVNLGAFVDGGAI--------------------DWERLDEAVRTAVVFLDRVVDI 489
Query: 503 NHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKAS 562
N YP E RSN R RP+G+G GL D F L LPF+SPEAQ+L+ I E I A + S
Sbjct: 490 NFYPTEQAERSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEAQRLSTRIAERIMLTAYETS 549
Query: 563 AELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMP 622
+LA K+GP + + ++G+L D ++ + W +LR ++++G+RN+LL+A P
Sbjct: 550 CDLAEKNGPLPNWDRTRTAQGVLHPDHYDTDLAWPERWEALRARVAESGMRNALLLAIAP 609
Query: 623 TASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYEN 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L++DL LG+W + + +
Sbjct: 610 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVEDLKRLGVWDARTREALREAS 669
Query: 683 GSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSL 742
GSV + IPEEL+A+Y+T WE+ Q+ L+DMAA R ++DQSQSLN+ ME P GKL+S+
Sbjct: 670 GSVQGFAWIPEELRALYRTAWELPQRGLIDMAAARTPFLDQSQSLNLFMETPTIGKLSSM 729
Query: 743 HFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQ 802
+ YAW KG+KT YYLR+R A + ++ +A D EA + CSL+N
Sbjct: 730 YAYAWKKGLKT-TYYLRSRPATRIARAAGGSAPATATVPAQAAPDAEA----IACSLENP 784
Query: 803 EECMAC 808
E C AC
Sbjct: 785 ESCEAC 790
>gi|395771543|ref|ZP_10452058.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
acidiscabies 84-104]
Length = 788
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 324/790 (41%), Positives = 453/790 (57%), Gaps = 57/790 (7%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN- 92
DP VA G +L ELA E AA + P Y+ LA R+ ++ +
Sbjct: 40 ADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPAYSRLAARLLTISIRAEAASQ 99
Query: 93 ---SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
+F+E++ G + L+AD E +A L+G + D F YFG +
Sbjct: 100 SVTTFTESVS---------VGHREGLIADRTAEFARLHATALNGLLDPAADDRFGYFGLR 150
Query: 150 TLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFTHATP 203
TL YLL+ + +V+E PQH L+RV+ G+ +DDT AL Y LMS+ + ++P
Sbjct: 151 TLHSRYLLRHPITRKVIETPQHFLLRVASGLAEDDTVRALDEVAALYRLMSRLDYLPSSP 210
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IR+ GS I
Sbjct: 211 TLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIR 270
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G++
Sbjct: 271 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 329
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV 383
R +L A W+PD FM RV D +WSLF PSD L D WG EF+ Y E +G AK
Sbjct: 330 RTHNLNLAHWIPDEFMRRVNADAEWSLFSPSDVPELVDLWGDEFDAAYRAAEAKGLAKKT 389
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEET 441
I AR L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E + ET
Sbjct: 390 IPARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHSSNLCTEILEVTDDGET 449
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L +V D ++ D+ERL E + L++++D
Sbjct: 450 AVCNLGSVNLGAFV------------------DPASQDIDWERLDETVRTAVTFLDRVVD 491
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N YP E RSN R RP+G+G GL D F L +PF+SPEA++L+ I E I A +A
Sbjct: 492 INFYPTEQAGRSNSRWRPVGLGAMGLQDVFFKLRIPFDSPEAKELSTRIAERIMLAAYEA 551
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPM 621
SA LA + GP + + ++G+L D + + + W++LRE I+ G+RNSLL+A
Sbjct: 552 SATLAERSGPLPAWEKTRTARGVLHPDHFGVEFTWPERWAALRERIASTGLRNSLLLAIA 611
Query: 622 PTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYE 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L++DL +LG+W + +
Sbjct: 612 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVQDLKDLGVWDARTREALREA 671
Query: 682 NGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTS 741
NGSV IP +++A+Y+T WEI Q+ L+DMAA R Y+DQ+QSLN+ +E P GKL+S
Sbjct: 672 NGSVQDFGWIPADVRALYRTAWEIPQRGLIDMAAARTPYLDQAQSLNLFLETPTIGKLSS 731
Query: 742 LHFYAWSKGMKTGMYYLRTRAA---ADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCS 798
++ YAW G+KT YYLR+R A A A + +V + A V CS
Sbjct: 732 MYAYAWKSGLKT-TYYLRSRPATRIARAAQASVPVQATPDPDA-------------VACS 777
Query: 799 LKNQEECMAC 808
L+N E C AC
Sbjct: 778 LENPESCEAC 787
>gi|408529355|emb|CCK27529.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
davawensis JCM 4913]
Length = 781
Score = 587 bits (1512), Expect = e-164, Method: Compositional matrix adjust.
Identities = 322/787 (40%), Positives = 452/787 (57%), Gaps = 55/787 (6%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN- 92
DP VA G +L ELA E AA + P Y+ LA R+ ++ +
Sbjct: 37 ADPGRVAAAALRGRSSRADEAELRELATEAAAGLISEDPAYSRLAARLLTISIAAEAASQ 96
Query: 93 ---SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
SF+E++ G + L+AD E + +A LD + D F YFG +
Sbjct: 97 GVVSFTESVA---------VGHREGLIADRTAEFVRIHAERLDALVDSGADDRFGYFGLR 147
Query: 150 TLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFTHATP 203
TL YLL+ + +VVE PQH ++RV+ G+ +DDT AL Y LMS+ + ++P
Sbjct: 148 TLHSRYLLRHPITRKVVETPQHFMLRVAAGLAEDDTTRALNEVAALYGLMSRLDYLPSSP 207
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IR+ GS I
Sbjct: 208 TLFNSGTRHPQMSSCYLLDSPMDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIR 267
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G++
Sbjct: 268 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 326
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV 383
R +L A W+PD FM RV +D +WSLF P+D L D WG EF+ Y + E+ G A+
Sbjct: 327 RTHNLNLAHWIPDEFMRRVNEDAQWSLFSPADVPELVDLWGEEFDAAYRRAEDAGLARKT 386
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG--TIKSSNLCTEIVEFSSPEET 441
I+AR L+ ++ + +TG +M FKD+ NR +NQ L + SSNLCTEI+E + ET
Sbjct: 387 IAARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTALPGHVVHSSNLCTEILEVTDDGET 446
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L +V N D+ERL + L++++D
Sbjct: 447 AVCNLGSVNLGAFV--------------------ANGDIDWERLDATVRTAVTFLDRVVD 486
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N YP E RSN + RP+G+G GL D F L LPF+SPEA+ L+ I E I A +A
Sbjct: 487 INFYPTEQAGRSNAKWRPVGLGAMGLQDVFFQLRLPFDSPEAKALSTRIAERIMLAAYEA 546
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPM 621
SA+LA ++GP + + ++G+L D ++ + W++LR I+ G+RNSLL+A
Sbjct: 547 SADLAERNGPLPAWEKTRTAQGVLHPDHYDAELTWPERWAALRSRIAGTGMRNSLLLAIA 606
Query: 622 PTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYE 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL ELG+W + +
Sbjct: 607 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVNDLKELGVWDARTREALREA 666
Query: 682 NGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTS 741
NGSV IPE+++ +Y+T WEI Q+ L+DMAA R ++DQSQSLN+ +E P GKL+S
Sbjct: 667 NGSVQDFVWIPEDVRRLYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTIGKLSS 726
Query: 742 LHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKN 801
++ YAW G+KT YYLR+R A +A +A V+ + V CSL+N
Sbjct: 727 MYAYAWKSGLKT-TYYLRSRPAT------------RIARAAQATLPVQQSADAVACSLEN 773
Query: 802 QEECMAC 808
E C AC
Sbjct: 774 PESCEAC 780
>gi|159040365|ref|YP_001539618.1| ribonucleoside-diphosphate reductase subunit alpha [Salinispora
arenicola CNS-205]
gi|157919200|gb|ABW00628.1| ribonucleoside-diphosphate reductase, alpha subunit [Salinispora
arenicola CNS-205]
Length = 821
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 333/839 (39%), Positives = 476/839 (56%), Gaps = 71/839 (8%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G EPV +KI +++ L + DP+ VA K +G+Y G TT +LD L+
Sbjct: 22 MEVRKRNGDTEPVDVNKIVKAVERWVADL--DEVDPLRVATKTISGLYDGATTAELDRLS 79
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAA + P Y+ LA R+ + + K + SFS++I+ + L+
Sbjct: 80 IQTAAELIGEEPQYSKLAARLLAAYVDKEVRGQQVASFSQSIRYAHGL---------GLI 130
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM-DSR-VVERPQHMLMRV 174
+DD + +NA LD A+ D F+YFG +T+ YLL+ SR VVE PQ+ L+RV
Sbjct: 131 SDDTAAFVSRNARKLDDAVDPAGDLRFEYFGLRTVADRYLLRHPQSRLVVETPQYWLLRV 190
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ G+ + + A+ Y LMS + ++PTLFN+GT Q+SSCFL+ D ++ IY
Sbjct: 191 ACGMSRTPAE-AIGFYQLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYQR 249
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG+S +R G+ I GTNG SNGIVP L+ + V+QGG +RK
Sbjct: 250 YHQVAKLSKFSGGIGISWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRK 308
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLEPWH DI EFL+LR N G++ R +L A W+PD FM RV DG WSL PS
Sbjct: 309 GAACVYLEPWHPDIEEFLELRDNTGEDARRTHNLNLANWLPDEFMRRVEADGDWSLIDPS 368
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
DA L D +G EF+ Y E+ +A + AR L+ ++ + +TG +M FKD N
Sbjct: 369 DAPELPDLYGDEFDAAYRVAEK--KAVRTVKARDLYGRMMRTLAQTGNGWMTFKDRSNTL 426
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ Q TI SNLCTEI+E ++ ETAVCNL S+ L +V GV
Sbjct: 427 SNQTGQPANTIHLSNLCTEILEVNNDTETAVCNLGSVNLGAHVTVDGV------------ 474
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D+E+L + L+++ID+N+YP E SN R RP+G+G+ GL D F
Sbjct: 475 --------DWEKLRATVRTAVVFLDRVIDINYYPAEQAAASNPRWRPVGLGLMGLQDAFF 526
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L LPF+S EA +L+ + E I+ AL+ SA LA + GP+ Y + ++G L D+W
Sbjct: 527 TLRLPFDSAEASELSTRVQEEIFLTALETSAGLAERFGPHPAYAETRAARGDLHPDLWGA 586
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
TP+ W+ L+ I+++G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 587 TPTQTRRWAGLKARIAEHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGE 646
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VN +L+ +L GLW+ ++ +I GSV + E+P E++ +++T WE+ Q+ L+D
Sbjct: 647 FLQVNTYLVGELKARGLWTAQIRDQIRRAEGSVQGLGELPAEVRELFRTAWELPQRALID 706
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAAD------A 766
+AA R YIDQSQSLN+ + P GKL+S++ YAW G+KT YYLR+R A A
Sbjct: 707 LAAARAPYIDQSQSLNLFLAAPTIGKLSSMYLYAWKSGLKT-TYYLRSRPATRIQQATVA 765
Query: 767 IKFTVDTSVLNNEKAN-----------------RADNDVEANLAQVVCSLKNQEECMAC 808
+ TV V + A A D EA + CSL+N E C AC
Sbjct: 766 VTPTVPPGVADASSAQPGVAPGLSGAAASSASGVAGTDAEA----LACSLENPESCEAC 820
>gi|289769188|ref|ZP_06528566.1| ribonucleotide-diphosphate reductase large subunit [Streptomyces
lividans TK24]
gi|289699387|gb|EFD66816.1| ribonucleotide-diphosphate reductase large subunit [Streptomyces
lividans TK24]
Length = 794
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 325/803 (40%), Positives = 457/803 (56%), Gaps = 43/803 (5%)
Query: 16 DKITARLKKLSYGLSKE--HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPD 73
D A L + GL+ + DP VA G +L ELA E AA + P
Sbjct: 24 DGPGAALLRTLTGLTADLPGADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPV 83
Query: 74 YALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDG 133
Y+ LA R+ + + T D + +G + L+AD + +A LD
Sbjct: 84 YSRLAARLLTIGIRAEAASQGVVTFTD-----SVATGHREGLIADRTAAFVRLHADRLDA 138
Query: 134 AIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT----DSAL 187
I D D F YFG +TL YLL+ + + VE PQH L+RV+ G+ +DDT D
Sbjct: 139 LIDQDADDRFGYFGLRTLYSRYLLRHPITRKAVETPQHFLLRVAAGLAEDDTLRAADEVA 198
Query: 188 KTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGG 247
Y LMS+ + ++PTLFN+GT Q+SSC+LL D ++ +YD L + A +SK AGG
Sbjct: 199 ALYGLMSRLDYLPSSPTLFNSGTRHAQMSSCYLLDSPKDELDSLYDRLHQVARLSKHAGG 258
Query: 248 IGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHAD 307
IG++ +RA GS I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHAD
Sbjct: 259 IGIAYSRVRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHAD 317
Query: 308 IFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEF 367
+ EFL+LR N G++ R +L A W+PD FM RV DG WSLF P+D L D WG EF
Sbjct: 318 VEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVDADGTWSLFSPADVPELTDLWGEEF 377
Query: 368 EHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG--TIKS 425
+ Y + EE G A+ + AR+L+ ++ + +TG +M FKD+ NR +NQ + S
Sbjct: 378 DAAYRRAEEAGLARRTLPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTATPGHVVHS 437
Query: 426 SNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERL 485
SNLCTEI+E + ETAVCNL S+ L +V D + D+ERL
Sbjct: 438 SNLCTEILEVTDDGETAVCNLGSVNLGAFV------------------DPAHGDMDWERL 479
Query: 486 AEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQ 545
+ L++++D+N YP E RSN R RP+G+G GL D F L LPF+SPEA+
Sbjct: 480 DATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSPEAKA 539
Query: 546 LNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLRE 605
L+ I E I A + SA+LA ++GP + + +KG+L D + + P+ W++LR
Sbjct: 540 LSTRIAERIMLAAYETSADLAERNGPLPAWEKTRTAKGVLHPDHYGVEPAWPERWAALRA 599
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLT 665
++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL
Sbjct: 600 RMATTGLRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDDLK 659
Query: 666 ELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQ 725
LG+W + + NGSV + IPE+++A+Y+T WEI Q+ L+DMAA R Y+DQ+Q
Sbjct: 660 RLGVWDARTREALREANGSVQGFTWIPEDVRALYRTAWEIPQRGLIDMAAARTPYLDQAQ 719
Query: 726 SLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRAD 785
SLN+ +E P GKL+S++ YAW +G+KT YYLR+R A + + + + A
Sbjct: 720 SLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAAARATTVPVQAA---- 774
Query: 786 NDVEANLAQVVCSLKNQEECMAC 808
D EA V CSL+N E C AC
Sbjct: 775 PDPEA----VACSLENPESCEAC 793
>gi|21223594|ref|NP_629373.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
coelicolor A3(2)]
gi|8546892|emb|CAB94611.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
coelicolor A3(2)]
Length = 791
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 324/803 (40%), Positives = 457/803 (56%), Gaps = 43/803 (5%)
Query: 16 DKITARLKKLSYGLSKE--HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPD 73
D A L + GL+ + DP VA G +L ELA E AA + P
Sbjct: 21 DGPGAALLRTLTGLTADLPGADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPV 80
Query: 74 YALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDG 133
Y+ LA R+ + + T D + +G + L+AD + +A LD
Sbjct: 81 YSRLAARLLTIGIRAEAASQGVVTFTD-----SVATGHREGLIADRTAAFVRLHADRLDA 135
Query: 134 AIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT----DSAL 187
I D D F YFG +TL YLL+ + + VE PQH L+RV+ G+ +DDT D
Sbjct: 136 LIDQDADDRFGYFGLRTLYSRYLLRHPITRKAVETPQHFLLRVAAGLAEDDTVRAADEVA 195
Query: 188 KTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGG 247
Y LMS+ + ++PTLFN+GT Q+SSC+LL D ++ +YD L + A +SK AGG
Sbjct: 196 ALYGLMSRLDYLPSSPTLFNSGTRHAQMSSCYLLDSPKDELDSLYDRLHQVARLSKHAGG 255
Query: 248 IGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHAD 307
IG++ +RA GS I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHAD
Sbjct: 256 IGIAYSRVRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHAD 314
Query: 308 IFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEF 367
+ EFL+LR N G++ R +L A W+PD FM RV DG WSLF P+D L D WG EF
Sbjct: 315 VEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVDADGTWSLFSPADVPELTDLWGEEF 374
Query: 368 EHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG--TIKS 425
+ Y + EE G A+ + AR+L+ ++ + +TG +M FKD+ NR +NQ + S
Sbjct: 375 DAAYRRAEEAGLARRTLPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTATPGHVVHS 434
Query: 426 SNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERL 485
SNLCTEI+E + ETAVCNL S+ L +V D + D+ERL
Sbjct: 435 SNLCTEILEVTDDGETAVCNLGSVNLGAFV------------------DPAHGDMDWERL 476
Query: 486 AEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQ 545
+ L++++D+N YP E RSN R RP+G+G GL D F L LPF+SPEA+
Sbjct: 477 DATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSPEAKA 536
Query: 546 LNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLRE 605
L+ I E I A + SA+LA ++GP + + ++G+L D + + P+ W++LR
Sbjct: 537 LSTRIAERIMLAAYETSADLAERNGPLPAWEKTRTARGVLHPDHYGVEPAWPERWAALRA 596
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLT 665
++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL
Sbjct: 597 RMATTGLRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDDLK 656
Query: 666 ELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQ 725
LG+W + + NGSV + IPE+++A+Y+T WEI Q+ L+DMAA R Y+DQ+Q
Sbjct: 657 RLGVWDARTREALREANGSVQGFTWIPEDVRALYRTAWEIPQRGLIDMAAARTPYLDQAQ 716
Query: 726 SLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRAD 785
SLN+ +E P GKL+S++ YAW +G+KT YYLR+R A + + + + A
Sbjct: 717 SLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAAARATTVPVQAA---- 771
Query: 786 NDVEANLAQVVCSLKNQEECMAC 808
D EA V CSL+N E C AC
Sbjct: 772 PDPEA----VACSLENPESCEAC 790
>gi|302554046|ref|ZP_07306388.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
viridochromogenes DSM 40736]
gi|302471664|gb|EFL34757.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
viridochromogenes DSM 40736]
Length = 793
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 326/790 (41%), Positives = 455/790 (57%), Gaps = 57/790 (7%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN- 92
DP VA G +L +LA E AA + P Y+ LA R+ + +
Sbjct: 45 TDPGRVAAAALRGRSARADEAELRDLATEAAAGLISEDPAYSRLAARLLTIGIRAEAASQ 104
Query: 93 ---SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
SF+E++ G + L+AD E + +AA LD I D F YFG +
Sbjct: 105 GVTSFTESVV---------VGHREGLIADRTAEFVRLHAARLDALIDPAADDRFGYFGLR 155
Query: 150 TLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT----DSALKTYHLMSQHWFTHATP 203
TL YLL+ + +VVE PQH ++RV+ G+ +D T D Y LMS+ + ++P
Sbjct: 156 TLHSRYLLRHPLTRKVVETPQHFMLRVAAGLAEDHTARSVDEVAALYELMSRLDYLPSSP 215
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGL+ IRA GS I
Sbjct: 216 TLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLAYSRIRARGSLIR 275
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+D+ EFL+LR N G++
Sbjct: 276 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDVEEFLELRDNTGEDAR 334
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV 383
R +L A WVPD FM RV D +WSLF PSD L D WG EF+ Y E +G AK
Sbjct: 335 RTHNLNLAHWVPDEFMRRVNADAQWSLFSPSDVPELVDLWGEEFDTAYRAAEAKGLAKRT 394
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEET 441
+ AR+L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E +S ET
Sbjct: 395 LPARELYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHSSNLCTEILEVTSDGET 454
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L +V D+ D++RL + L++++D
Sbjct: 455 AVCNLGSVNLGAFV------------------DTSTGDLDWDRLDATVRTAVTFLDRVVD 496
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N YP E RSN R RP+G+G GL D F L LPF+SPEA+ L+ I E I A +A
Sbjct: 497 INFYPTEQAGRSNSRWRPVGLGAMGLQDVFFKLRLPFDSPEAKALSTRIAERIMLAAYEA 556
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPM 621
SA+LA + GP + + ++G+L D +++ + W++LRE I+ G+RNSLL+A
Sbjct: 557 SADLAERSGPLPAWEKTRTARGVLHPDHYDVELTWPERWAALRERIAATGMRNSLLLAIA 616
Query: 622 PTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYE 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L LG+W + +
Sbjct: 617 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDELKRLGVWDARSREALREA 676
Query: 682 NGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTS 741
+GSV + IPE+++A+Y+T WEI Q+ L+DMAA R ++DQSQSLN+ +E P GKL+S
Sbjct: 677 SGSVQDFAWIPEDVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTIGKLSS 736
Query: 742 LHFYAWSKGMKTGMYYLRTRAA---ADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCS 798
++ YAW G+KT YYLR+R A A A + TV +A D EA V CS
Sbjct: 737 MYAYAWKSGLKT-TYYLRSRPATRIARAAQATVPA---------QATPDPEA----VACS 782
Query: 799 LKNQEECMAC 808
L+N E C AC
Sbjct: 783 LENPESCEAC 792
>gi|238061573|ref|ZP_04606282.1| ribonucleoside-diphosphate reductase, alpha subunit [Micromonospora
sp. ATCC 39149]
gi|237883384|gb|EEP72212.1| ribonucleoside-diphosphate reductase, alpha subunit [Micromonospora
sp. ATCC 39149]
Length = 792
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 324/810 (40%), Positives = 472/810 (58%), Gaps = 54/810 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G EPV +KI +++ L + DP+ VA K +G+Y G TT +LD+L+ +TAA
Sbjct: 28 NGDAEPVDVNKIVKAVERWVADL--DEVDPLRVATKTISGLYDGATTAELDKLSIQTAAE 85
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLVADDVYE 122
+ P Y+ LA R+ + + K + SFS+++ R L+ DD
Sbjct: 86 LISEEPQYSKLAARLLAAYVDKEVRGQQVASFSQSV---------RYAHGLGLIGDDTAA 136
Query: 123 IIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM-DSR-VVERPQHMLMRVSVGIHK 180
+ +NA LD A+ D F+YFG +T+ YLL+ +SR VVE PQ+ L+RV+ G+ +
Sbjct: 137 FVARNARKLDDAVDPAGDLRFEYFGLRTVADRYLLRQPESRLVVETPQYWLLRVACGLSE 196
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+ A+ Y LMS + ++PTLFN+GT Q+SSCFL+ D ++ IY+ + A
Sbjct: 197 TPAE-AIGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYERYHQVAK 255
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
+SK +GGIG++ +R G+ I GTNG SNGIVP L+ + V+QGG +RKGA +Y
Sbjct: 256 LSKFSGGIGIAWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRKGAACVY 314
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH DI EFL+LR N G+E R +L A W+PD FM RV DG WSL PSDA L
Sbjct: 315 LEPWHPDIEEFLELRDNTGEESRRTHNLNLANWIPDEFMRRVEADGDWSLIDPSDAPELP 374
Query: 361 DSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
D +G EF+ Y E+ +A + AR L+ ++ + +TG +M FKD NR SNQ +
Sbjct: 375 DLYGEEFDAAYRIAEK--KAIRTVKARDLYGRMMRTLAQTGNGWMTFKDPSNRLSNQTGV 432
Query: 421 --GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNR 478
TI SNLCTEI+E +S ETAVCNL SI L +V GV
Sbjct: 433 PGNTIHLSNLCTEILEVNSDTETAVCNLGSINLGAHVTVDGV------------------ 474
Query: 479 LFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPF 538
D+ +L + L+++ID+N+YP SN R RP+G+G+ GL D F L LPF
Sbjct: 475 --DWVKLRSTVRTAVVFLDRVIDINYYPATQAAASNPRWRPVGLGLMGLQDAFFTLRLPF 532
Query: 539 ESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRW 598
+S A++L+ + E I+ AL+ SA L+ + GP+ Y + ++G L D+W + P+
Sbjct: 533 DSAAARELSTRVQEEIFLTALETSAGLSERFGPHPAYAETRAARGELHPDLWGVEPTQTE 592
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
W++LR I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGEF+ +N
Sbjct: 593 RWAALRATIAAHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGEFLQINT 652
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
+L+++L GLW+ ++ +I GSV I ++P +++ +++T WE+ Q+TL+D+AA R
Sbjct: 653 YLVRELKAHGLWTPQIRDQIKRAEGSVQGIDDLPADVRELFRTAWELPQRTLIDLAAARA 712
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN 778
YIDQSQSLN+ + P GKL+S++ YAW G+KT YYLR+R A + TV
Sbjct: 713 PYIDQSQSLNLFLSAPTIGKLSSMYLYAWKSGLKT-TYYLRSRPATRIQQATVAV----- 766
Query: 779 EKANRADNDVEANLAQVVCSLKNQEECMAC 808
K A +D EA + CSL+N E C AC
Sbjct: 767 -KPVVAVSDTEA----LACSLENPESCEAC 791
>gi|7328344|emb|CAB82485.1| class I ribonucleotide-diphosphate reductase large subunit chain
[Streptomyces coelicolor A3(2)]
Length = 791
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 323/803 (40%), Positives = 457/803 (56%), Gaps = 43/803 (5%)
Query: 16 DKITARLKKLSYGLSKE--HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPD 73
D A L + GL+ + DP VA G +L ELA E AA + P
Sbjct: 21 DGPGAALLRTLTGLTADLPGADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPV 80
Query: 74 YALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDG 133
Y+ LA R+ + + T D + +G + L+AD + +A LD
Sbjct: 81 YSRLAARLLTIGIRAEAASQGVVTFTD-----SVATGHREGLIADRTAAFVRLHADRLDA 135
Query: 134 AIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT----DSAL 187
I D D F YFG +TL YLL+ + + VE PQH L+RV+ G+ +DDT D
Sbjct: 136 LIDQDADDRFGYFGLRTLYSRYLLRHPITRKAVETPQHFLLRVAAGLAEDDTVRAADEVA 195
Query: 188 KTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGG 247
Y LMS+ + ++PTLFN+GT Q+SSC+LL D ++ +YD L + A +SK AGG
Sbjct: 196 ALYGLMSRLDYLPSSPTLFNSGTRHAQMSSCYLLDSPKDELDSLYDRLHQVARLSKHAGG 255
Query: 248 IGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHAD 307
IG++ +RA GS I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHAD
Sbjct: 256 IGIAYSRVRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHAD 314
Query: 308 IFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEF 367
+ EFL+LR N G++ R +L A W+PD FM RV DG WSLF P+D L D WG EF
Sbjct: 315 VEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVDADGTWSLFSPADVPELTDLWGEEF 374
Query: 368 EHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG--TIKS 425
+ Y + EE G A+ + AR+L+ ++ + +TG +M FKD+ NR +NQ + S
Sbjct: 375 DAAYRRAEEAGLARRTLPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTATPGHVVHS 434
Query: 426 SNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERL 485
SNLCTEI+E + ETAVCNL S+ L +V D + D+ERL
Sbjct: 435 SNLCTEILEVTDDGETAVCNLGSVNLGAFV------------------DPAHGDMDWERL 476
Query: 486 AEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQ 545
+ L++++D+N YP E RSN R RP+G+G GL D F L LPF+SPEA+
Sbjct: 477 DATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSPEAKA 536
Query: 546 LNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLRE 605
L+ I E I A + SA+LA ++GP + + ++G+L D + + P+ W++LR
Sbjct: 537 LSTRIAERIMLAAYETSADLAERNGPLPAWEKTRTARGVLHPDHYGVEPAWPERWAALRA 596
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLT 665
++ G+RNS+L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL
Sbjct: 597 RMATTGLRNSMLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDDLK 656
Query: 666 ELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQ 725
LG+W + + NGSV + IPE+++A+Y+T WEI Q+ L+DMAA R Y+DQ+Q
Sbjct: 657 RLGVWDARTREALREANGSVQGFTWIPEDVRALYRTAWEIPQRGLIDMAAARTPYLDQAQ 716
Query: 726 SLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRAD 785
SLN+ +E P GKL+S++ YAW +G+KT YYLR+R A + + + + A
Sbjct: 717 SLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAAARATTVPVQAA---- 771
Query: 786 NDVEANLAQVVCSLKNQEECMAC 808
D EA V CSL+N E C AC
Sbjct: 772 PDPEA----VACSLENPESCEAC 790
>gi|456388969|gb|EMF54409.1| nrdL protein [Streptomyces bottropensis ATCC 25435]
Length = 774
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 325/795 (40%), Positives = 455/795 (57%), Gaps = 56/795 (7%)
Query: 34 CDPVLVAQKVCAG-VYKGVTT---TQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKI 89
DP VA G +G + +L ELA E AA + P Y+ LA R+ +
Sbjct: 15 ADPGRVAAAALRGRSSRGASAEMIVELRELATEAAAGLISEDPAYSKLAARLLAIGIRDE 74
Query: 90 TKN----SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDY 145
+ +F+E+I G + LVAD E +A LD + D F Y
Sbjct: 75 AASQGVTTFTESIA---------VGHREGLVADRTAEFARVHAERLDALVDPAGDDRFGY 125
Query: 146 FGFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT----DSALKTYHLMSQHWFT 199
FG +TL YLL+ + +VVE PQH ++RV+ G+ +DDT D Y LMS+ +
Sbjct: 126 FGLRTLHSRYLLRHPLTRKVVETPQHFMLRVASGLAEDDTTRAVDEVAALYRLMSRLDYL 185
Query: 200 HATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASG 259
++PTLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IR+ G
Sbjct: 186 PSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRG 245
Query: 260 SYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQG 319
S I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G
Sbjct: 246 SLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTG 304
Query: 320 KEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGR 379
++ R +L A W+PD FM RV D +WSLF P+D L D WG EFE Y + E G
Sbjct: 305 EDARRTHNLNLAHWIPDEFMRRVNADEQWSLFSPADVPELVDLWGEEFEAAYRKAEANGL 364
Query: 380 AKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSS 437
A+ I+AR L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E +
Sbjct: 365 ARKTIAARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHSSNLCTEILEVTD 424
Query: 438 PEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLN 497
ETAVCNL S+ L +V D D++RL E + L+
Sbjct: 425 DGETAVCNLGSVNLGAFV------------------DRAAGDMDWQRLDETVRTAVTFLD 466
Query: 498 KIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYH 557
+++D+N YP E RSN R RP+G+G GL D F L LPF+SPEA+ L+ I E I
Sbjct: 467 RVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSPEAKALSTRIAERIMLA 526
Query: 558 ALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLL 617
A +ASA+LA ++GP + + ++G+L D ++ P+ W++LRE ++ G+RNSLL
Sbjct: 527 AYEASADLAERNGPLPAWEKTRTARGVLHPDHFDARPAWPERWAALREHVATTGMRNSLL 586
Query: 618 VAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTK 677
+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+KDL ELG+W +
Sbjct: 587 LAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVKDLKELGVWDARTREA 646
Query: 678 IIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHG 737
+ GSV + IP +++A+Y+T WEI Q+ L+DMAA R Y+DQSQSLN+ +E P G
Sbjct: 647 LRESGGSVEDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPYLDQSQSLNLFLETPTIG 706
Query: 738 KLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLA---- 793
KL+S++ YAW G+KT YYLR+R A + +A + + ++ A
Sbjct: 707 KLSSMYAYAWKSGLKT-TYYLRSRPATRIARAA-------QGQARQPETNIPLQQATSAE 758
Query: 794 QVVCSLKNQEECMAC 808
V CSL+N E C AC
Sbjct: 759 AVACSLENPESCEAC 773
>gi|386383362|ref|ZP_10068864.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
tsukubaensis NRRL18488]
gi|385669177|gb|EIF92418.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
tsukubaensis NRRL18488]
Length = 801
Score = 583 bits (1504), Expect = e-163, Method: Compositional matrix adjust.
Identities = 323/789 (40%), Positives = 452/789 (57%), Gaps = 54/789 (6%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN-- 92
DP VA G + G +L +LA + AA + + P Y+ LA R+ +
Sbjct: 51 DPGRVAAAALRGRHPGSDAAELHQLATDAAAGLISDDPAYSRLAARLLTRTIAAEAAGQG 110
Query: 93 --SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKT 150
SF+ ++ R G L+AD + + A LD I D F YFG +T
Sbjct: 111 SVSFTASV---------RVGHDEGLIADRTAAFVERYAERLDATIDPAADDRFGYFGLRT 161
Query: 151 LERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT----DSALKTYHLMSQHWFTHATPT 204
L YLL+ + +V+E PQH ++RV+ G+ +DD D + Y LMS+ + ++PT
Sbjct: 162 LYSRYLLRHPITRQVIETPQHFMLRVACGLAEDDGVRALDEVVALYGLMSRLDYLPSSPT 221
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IRA GS I G
Sbjct: 222 LFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGSLIRG 281
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHADI EFL+LR N G++ R
Sbjct: 282 TNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEDARR 340
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVI 384
+L A WVPD FM RV DD +WSLF P+D L D WG EF+ Y E +G A+ +
Sbjct: 341 THNLNLAHWVPDEFMRRVADDAEWSLFSPADTPELVDLWGDEFDAAYRAAEAKGLARKTM 400
Query: 385 SARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEETA 442
AR+L+ ++ + +TG +M FKD+ NR +NQ + T+ SSNLCTEI+E + ETA
Sbjct: 401 PARELYGRMMRTLAQTGNGWMTFKDAANRTANQTAEKGHTVHSSNLCTEILEVTDDGETA 460
Query: 443 VCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDV 502
VCNL S+ L +V VG D+ERL + L++++D+
Sbjct: 461 VCNLGSVNLGAFV--------------VGGE------IDWERLDATVRTAVTFLDRVVDI 500
Query: 503 NHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKAS 562
N YP E RSN R RP+G+G GL D F L LPF+SPEA+ L+ I E I A +AS
Sbjct: 501 NFYPTEQAGRSNTRWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTRIAERIMLAAYEAS 560
Query: 563 AELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMP 622
A+LA + G + + + ++G+L D + P+ W +LR I++ G+RNSLL+A P
Sbjct: 561 ADLAERHGTFPAWEKTRAARGVLHPDHYGTEPAWPERWEALRARIARTGMRNSLLLAIAP 620
Query: 623 TASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYEN 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +LG+W + + N
Sbjct: 621 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVAELKKLGVWDAQTREALRDAN 680
Query: 683 GSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSL 742
GSV S +P +++ +Y+T WEI Q+ L+DMAA R Y+DQSQSLN+ +E P GKL+S+
Sbjct: 681 GSVQGFSWVPADVRELYRTAWEIPQRGLIDMAAARTPYLDQSQSLNLFLETPTIGKLSSM 740
Query: 743 HFYAWSKGMKTGMYYLRTRAA---ADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSL 799
+ YAW +G+KT YYLR+R A A A + T V +A + V CSL
Sbjct: 741 YAYAWKQGLKT-TYYLRSRPATRIARAASGSAATPVPVPAQATPEE--------AVACSL 791
Query: 800 KNQEECMAC 808
+N E C AC
Sbjct: 792 ENPESCEAC 800
>gi|86261680|emb|CAC17629.2| class I ribonucleotide-diphosphate reductase large subunit chain
[Streptomyces jumonjinensis]
Length = 811
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 320/788 (40%), Positives = 451/788 (57%), Gaps = 51/788 (6%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN-- 92
DP VA G + G +L LA + AA + P Y+ LA R+ + +
Sbjct: 60 DPGRVAAAALRGRHAGSDAAELRGLATDAAAGLISEDPAYSRLAARLLTRTIADEAEGQG 119
Query: 93 --SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKT 150
SFS ++ G L+AD + +AA LD I D F YFG +T
Sbjct: 120 AVSFSASVA---------VGFAEGLIADRTAAFVTLHAARLDALIDPAADDRFGYFGLRT 170
Query: 151 LERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSAL----KTYHLMSQHWFTHATPT 204
L YLL+ + +V+E PQH ++RV+ G+ +DD+ AL Y LMS+ + ++PT
Sbjct: 171 LYSRYLLRHPITRQVIETPQHFMLRVACGLAEDDSTRALDEVAALYRLMSRLDYLPSSPT 230
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS +RA GS I G
Sbjct: 231 LFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRVRARGSLIRG 290
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHAD+ EFL+LR N G++ R
Sbjct: 291 TNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADVEEFLELRDNTGEDARR 349
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVI 384
+L A W+PD FM RV D WSLF PSD L D WG +F+ Y + E G A+ +
Sbjct: 350 THNLNLAHWIPDEFMRRVEADTAWSLFSPSDVPELVDLWGDDFDTAYRRAEAAGLARKTM 409
Query: 385 SARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG--TIKSSNLCTEIVEFSSPEETA 442
AR+L+ ++ + +TG +M FKD+ NR +NQ L T+ SSNLCTEI+E + ETA
Sbjct: 410 PARELYGRMMRTLAQTGNGWMTFKDASNRTANQTALPGRTVHSSNLCTEILEVTDDAETA 469
Query: 443 VCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDV 502
VCNL S+ L +V + + D+ERL + L++++D+
Sbjct: 470 VCNLGSVNLAAFVTQDDI--------------------DWERLDATVRTAVTFLDRVVDI 509
Query: 503 NHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKAS 562
N YP E RSN R RP+G+G GL D F L LPF+SP A+ L+ I E I A +AS
Sbjct: 510 NFYPTEQAGRSNNRWRPVGLGAMGLQDVFFQLKLPFDSPAARTLSTRIAERIMLAAYEAS 569
Query: 563 AELAVKDGPYETYFGSPMSKGILQVDMWNITP--SDRWDWSSLREMISKNGVRNSLLVAP 620
A+LA + GP + + + G+L D +N TP DRW+ +LRE I+ G+RNSLL+A
Sbjct: 570 ADLAERHGPLPAWNETRTAHGVLHPDHYNTTPHWPDRWN--ALRERIAATGLRNSLLLAI 627
Query: 621 MPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIY 680
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+++L LG+W + +
Sbjct: 628 APTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNTYLVQELKNLGVWDATTREALRD 687
Query: 681 ENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLT 740
NGS+ +++P +++ +Y+T WEI Q+ L+DMAA R Y+DQSQSLN+ +E P GKL+
Sbjct: 688 ANGSIQNFTQVPADVRELYRTAWEIPQRGLIDMAAARTPYLDQSQSLNLFLETPTIGKLS 747
Query: 741 SLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLK 800
S++ YAW +G+KT YYLR+R A + +T+ +A V CSL+
Sbjct: 748 SMYAYAWKQGIKT-TYYLRSRPATRIARAASNTNAGATVPVPAQTTPEDA----VACSLE 802
Query: 801 NQEECMAC 808
N E C AC
Sbjct: 803 NPESCEAC 810
>gi|291303012|ref|YP_003514290.1| ribonucleoside-diphosphate reductase subunit alpha [Stackebrandtia
nassauensis DSM 44728]
gi|290572232|gb|ADD45197.1| ribonucleoside-diphosphate reductase, alpha subunit [Stackebrandtia
nassauensis DSM 44728]
Length = 771
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 325/803 (40%), Positives = 470/803 (58%), Gaps = 54/803 (6%)
Query: 15 FDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDY 74
D + +++L+ GL+ + V+ V AG + G T +L A E AA++ P Y
Sbjct: 13 IDHVVQVVRRLASGLADVEAE--TVSGPVVAGNWPGATEAELRLRAVEVAASLVATEPGY 70
Query: 75 ALLAGRVAVSNLHKITKNS----FSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAAC 130
+ LA R+ ++ + S FSE + +G +A L++D ++E + NA
Sbjct: 71 SRLAARLLSEHIGDEVRLSDVGCFSEAMS---------AGYRAGLISDGLWEFVSSNAPK 121
Query: 131 LDGAIIYDRDFDFDYFGFKTLERSYLLKM-DSRVV-ERPQHMLMRVSVGIHKDDTDSALK 188
LD + D F+YFG +T+ YLL+ ++R+V E PQH MRV+ G+ + +D +
Sbjct: 122 LDALVDDGADDRFEYFGIRTVYDRYLLRHPETRLVLETPQHFFMRVACGLSETVSD-VTE 180
Query: 189 TYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGI 248
Y L+S + ++PTLFNAGT + QLSSCFLL D +E IYD + A +SK AGGI
Sbjct: 181 LYGLLSTLSYLPSSPTLFNAGTRRSQLSSCFLLDSPRDELESIYDRYSQAARLSKYAGGI 240
Query: 249 GLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADI 308
G++ IR+ GS I GTNG SNGIVP L+ + + V+QGG +RKGA +YL WHADI
Sbjct: 241 GMAWSRIRSRGSLIRGTNGHSNGIVPWLRTLDSSVAAVNQGG-RRKGAACVYLATWHADI 299
Query: 309 FEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFE 368
EFL+LR N G E+ R +L A W+PD FM RV DG WSLF P D L D WG EFE
Sbjct: 300 EEFLELRDNTGSEDRRTHNLNLANWIPDEFMRRVESDGDWSLFDPKDVPELVDLWGEEFE 359
Query: 369 HLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL--GTIKSS 426
Y E G+A V+SAR L+ ++ + +TG +M F D NR NQ + + S
Sbjct: 360 KAYRDAEAAGKAARVVSARDLYGRMMRTLAQTGNGWMTFADISNRTCNQTAVPGNVVHLS 419
Query: 427 NLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLA 486
NLCTEI+E +S ETAVCNL S+ L + + G FDFERLA
Sbjct: 420 NLCTEILEVTSDAETAVCNLGSVNLAAHCVDGG--------------------FDFERLA 459
Query: 487 EVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQL 546
+ L++ ID+ +YP ++N R RPIG+G+ G+AD F L +PF+S EA++L
Sbjct: 460 RSVRTAVTFLDRSIDLTYYPTAEAEKANRRWRPIGLGLMGMADVFFKLRMPFDSAEAREL 519
Query: 547 NKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-NITPSDRWDWSSLRE 605
+ I ETI A + SA+LA + G + +Y + ++G+L VD + + +D W +RE
Sbjct: 520 SNRISETIALAAYETSADLAARLGAHPSYDDTRAARGVLHVDHFADAAVTDPDAWQRVRE 579
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLT 665
+++ NG+RNSL++A PTA+ + I G +EC EP SN++ R LSGEFI VNK+L+ DL
Sbjct: 580 LVAANGLRNSLMIAIAPTATIAAIAGCSECTEPVVSNVFKRETLSGEFIQVNKYLIADLK 639
Query: 666 ELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQ 725
+ GLW+ L+ ++ GS++ I+ IP+EL+ +Y+T WE+ Q+ L+D+AA R +IDQSQ
Sbjct: 640 QRGLWNEKLREAVVRAEGSIADIAAIPQELRQLYRTAWELPQRALIDLAAGRTPFIDQSQ 699
Query: 726 SLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRAD 785
SLN+ M P GKL+S++ YAW G+KT YYLR+R A + TV ++
Sbjct: 700 SLNLFMAAPTIGKLSSMYAYAWRSGLKT-TYYLRSRPATRINQTTVASA----------- 747
Query: 786 NDVEANLAQVVCSLKNQEECMAC 808
+V+A + CSL+N E C AC
Sbjct: 748 PEVDAEAEAIACSLENPETCEAC 770
>gi|386842423|ref|YP_006247481.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374102724|gb|AEY91608.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451795716|gb|AGF65765.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 786
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 318/787 (40%), Positives = 451/787 (57%), Gaps = 50/787 (6%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN- 92
DP VA G +L ELA E AA + P Y+ LA R+ + +
Sbjct: 37 ADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPAYSKLAARLLTLAIRDEAASQ 96
Query: 93 ---SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
SF+E+I G + L+AD E + +A LD + D F YFG +
Sbjct: 97 GVSSFTESIA---------VGHREGLIADRTAEFVRLHAERLDALVDRTADDRFGYFGLR 147
Query: 150 TLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT----DSALKTYHLMSQHWFTHATP 203
TL YLL+ + +VVE PQH L+RV+ G+ +DDT D Y LMS+ + ++P
Sbjct: 148 TLHSRYLLRHPVTRKVVETPQHFLLRVASGLAEDDTSRSVDEVAALYGLMSRLDYLPSSP 207
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFN+GTP PQ+S+C+LL D ++ IYD + A +SK AGGIGLS IR+ GS I
Sbjct: 208 TLFNSGTPHPQMSACYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIR 267
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G++
Sbjct: 268 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 326
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV 383
R +L A W+PD FM RV D +WSLF P+D L D WG +F+ Y + E G AK
Sbjct: 327 RTHNLNLAHWIPDEFMRRVNADEQWSLFSPADVPELVDLWGEDFDAAYRKAEAAGLAKKT 386
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEET 441
I+AR L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E ++ ET
Sbjct: 387 IAARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGNVVHSSNLCTEILEVTNDGET 446
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L +V D+ + D+ERL + + L++++D
Sbjct: 447 AVCNLGSVNLGAFV------------------DAASGDIDWERLDQTVRTAVTFLDRVVD 488
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N YP E RSN + RP+G+G GL D F L LPF+S EA+ L+ I E I A +
Sbjct: 489 INFYPTEQAGRSNAKWRPVGLGAMGLQDVFFKLRLPFDSAEAKALSTRIAERIMLAAYET 548
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPM 621
SA+LA ++GP + + ++G+L D +++ + W++LRE ++ G+RN+L++A
Sbjct: 549 SADLAERNGPLPAWDQTRAARGVLHPDHYDVQFTWPERWAALRERVAAVGMRNALMLAIA 608
Query: 622 PTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYE 681
PT++ + I G EC EP SN++ R LSGEF+ VN +L++DL LG+W + +
Sbjct: 609 PTSTIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVQDLKNLGVWDARTREALRDS 668
Query: 682 NGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTS 741
NGS+ IPEE +A+Y+T WEI Q+ L+DMAA R Y+DQ QSLN+ ME P GKL+S
Sbjct: 669 NGSIQDFPWIPEETRALYRTAWEIPQRGLIDMAAARTPYLDQGQSLNLFMETPTIGKLSS 728
Query: 742 LHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKN 801
++ YAW G+KT YYLR+R A I +V + A D + CSL+N
Sbjct: 729 MYAYAWKSGLKT-TYYLRSRPATR-IARAAQATVPAQQPAPDPD--------AIACSLEN 778
Query: 802 QEECMAC 808
E C AC
Sbjct: 779 PESCEAC 785
>gi|302542645|ref|ZP_07294987.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
hygroscopicus ATCC 53653]
gi|302460263|gb|EFL23356.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
himastatinicus ATCC 53653]
Length = 804
Score = 580 bits (1495), Expect = e-162, Method: Compositional matrix adjust.
Identities = 330/816 (40%), Positives = 463/816 (56%), Gaps = 62/816 (7%)
Query: 19 TARLKKLSYGLSKE--HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYAL 76
TA L+ L+ GL+ + DP VA G + G +L LA E AA + P+Y+
Sbjct: 24 TALLRTLT-GLTADLPATDPGKVAAAALRGRHPGSDEAELRSLATEAAAGLIGEEPEYSK 82
Query: 77 LAGRVAVSNLHKITK----NSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLD 132
LA R+ + +SFS ++ G + L+AD E + + A LD
Sbjct: 83 LAARLLTRAIADEAAGQGADSFSASVA---------VGHREGLIADSTAEFVTAHTARLD 133
Query: 133 G----AIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSA 186
A+ D F YFG +TL YLL+ + +V+E PQH L+RV+ G+ +D ++ A
Sbjct: 134 ALVDRALADGADDRFGYFGLRTLHSRYLLRHPITRQVIETPQHFLLRVACGLAEDLSERA 193
Query: 187 L----KTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIIS 242
L + Y + S + ++PTLFN+GT PQ+SSC+LL D ++ IY+ + A +S
Sbjct: 194 LDDVAELYRMTSTLSYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYNRYHQVARLS 253
Query: 243 KSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLE 302
K AGGIGLS IRA GS I GTNG SNGIVP L+ + + V+QGG +RKGA +YLE
Sbjct: 254 KHAGGIGLSYSRIRARGSLIRGTNGHSNGIVPFLRTLDASVAAVNQGG-RRKGAACVYLE 312
Query: 303 PWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADS 362
WHADI EFL+LR N G+E R +L A W+PD FM RV DG WSLF P DA L D
Sbjct: 313 TWHADIEEFLELRDNTGEEARRTHNLNVAHWIPDEFMRRVEADGDWSLFSPVDAPELVDL 372
Query: 363 WGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG- 421
WG EF+ Y + E EGRA + AR+L+ ++ + +TG +M FKD+ NR +NQ
Sbjct: 373 WGEEFDAAYRKAEAEGRALKQVPARQLYSRMMRTLAQTGNGWMTFKDAANRTANQTAEAG 432
Query: 422 -TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
+ SSNLCTEI+E + ETAVCNL S+ L ++ E G
Sbjct: 433 RVVHSSNLCTEILEVTDDGETAVCNLGSVNLSAHLGEDGE-------------------M 473
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+ERL + L++++D+N YP E SN R RP+G+G+ GL D F L LPF+S
Sbjct: 474 DWERLDRTVRTAVTFLDRVVDINFYPTEEAGASNSRWRPVGLGLMGLQDVFFRLRLPFDS 533
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWD- 599
PEAQ L+ I E I A +AS +LA + GP+ + + ++G+L D + + W
Sbjct: 534 PEAQALSTRISERIMLAAYEASCDLAERHGPHPAWAETRTARGVLHPDHYTGAQA-AWPE 592
Query: 600 -WSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
W +LR ++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN
Sbjct: 593 RWEALRTRMATTGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNN 652
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
+L+ DL +LG+W + + NGSV +S +P++++ +Y+T WEI Q+ L+DMAA R
Sbjct: 653 YLVNDLKKLGVWDTQTRDALREANGSVQDLSWVPQDVRDLYRTAWEIPQRALIDMAAART 712
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAA------ADAIKFTVD 772
Y+DQSQSLN+ M P GKL+S++ YAW +G+KT YYLR+R A A T
Sbjct: 713 PYLDQSQSLNLFMAAPTIGKLSSMYAYAWKRGIKT-TYYLRSRPATRIAQSARGGAATAT 771
Query: 773 TSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
T V A + ++ +A V CSL+N E C AC
Sbjct: 772 TPVPAPVPAQQTPDEADA----VACSLENPESCEAC 803
>gi|358457764|ref|ZP_09167980.1| ribonucleoside-diphosphate reductase, alpha subunit [Frankia sp.
CN3]
gi|357079044|gb|EHI88487.1| ribonucleoside-diphosphate reductase, alpha subunit [Frankia sp.
CN3]
Length = 837
Score = 580 bits (1495), Expect = e-162, Method: Compositional matrix adjust.
Identities = 327/825 (39%), Positives = 473/825 (57%), Gaps = 42/825 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V R G EPV I + + + L + DP+ VA + G+Y GV+ +LD+LA
Sbjct: 37 MRVRHRGGTLEPVDVSGIADAVARRADDLDR--VDPLRVASRTIGGLYDGVSAEELDKLA 94
Query: 61 AETAAAMTVNHPDYAL---------LAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGK 111
+TAA + P Y+ +A VA + SFSE + + G
Sbjct: 95 VQTAADLIGEEPQYSRLAARLLAALIADEVAGQGI-----TSFSEGVAN---------GH 140
Query: 112 KASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSR--VVERPQH 169
+ L+ D + +AA LD I D D F+YFG +T+ YLL+ VVE PQ
Sbjct: 141 RLGLIGDPTAAFVAAHAAELDALIDPDADRAFEYFGIRTVADRYLLRHPRTRLVVETPQR 200
Query: 170 MLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
L+RV+ G+ D ++A + Y LM+ + ++PTLFNAGT PQ+SSCFL+ D +E
Sbjct: 201 WLLRVACGLSHDVAEAA-ELYRLMASLAYLPSSPTLFNAGTAHPQMSSCFLVDSPRDELE 259
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
IY+ + A +SK AGGIG+ +R+ G+ I GTNG SNGIVP L+ + + V+QG
Sbjct: 260 SIYERYSQVARLSKFAGGIGIGFSRVRSRGALIRGTNGRSNGIVPWLRTLDASVAAVNQG 319
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G +RKGA +YLEPWH DI EFL+LR N G++ R +L A W+PD FM RVR D WS
Sbjct: 320 G-RRKGAACVYLEPWHPDIEEFLELRDNTGEDARRTHNLSLAHWIPDEFMRRVRADESWS 378
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKD 409
L P + L D WG EF+ Y E GR + AR L+ ++ + +TG +M FKD
Sbjct: 379 LMDPDEVPELTDLWGDEFDRAYRAAETAGRYVRQLPARDLYARMMRTLAQTGNGWMTFKD 438
Query: 410 SCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREK----GVPVQ 463
+ NR NQ + I SNLCTEI+E +S ETAVCNL S+ L R++ G P
Sbjct: 439 AANRTGNQTAEPGNVIHLSNLCTEILEVTSDAETAVCNLGSVNLARHLLAPRLADGDPST 498
Query: 464 SNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIG 523
S+ + + D R+ D+ L + L+++ID+N+YP SN R RP+G+G
Sbjct: 499 SSTAP---TADPGGRI-DWAMLRATVRTAVTFLDRVIDINYYPTGEAAASNPRWRPVGLG 554
Query: 524 IQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKG 583
+ GL D F L LPF+S A++L+ + E I AL+ S ELA + GP+ + + ++G
Sbjct: 555 VMGLQDVFFALRLPFDSAAARELSTRLSEEIVLTALERSVELAREHGPHPAFAQTRAARG 614
Query: 584 ILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNI 643
+L D +++TPS W++LR I ++G+RN LL+A PTA+ + I G EC EP SN+
Sbjct: 615 VLHPDHFDVTPSQPARWAALRADIVEHGLRNCLLIAIAPTATIASIAGCYECIEPQVSNV 674
Query: 644 YTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVW 703
+ R LSGEF+ +N +L+++L GLW+ ++ +I GSV +I E+P++L+ +++T W
Sbjct: 675 FKRETLSGEFLQINSYLVEELRGRGLWTAPVRERIRAAEGSVQEIGELPDDLRVLFRTAW 734
Query: 704 EIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAA 763
E+ Q+ L+D+AA R YIDQSQSLN+ M P+ G+L+S++ YAWS G+KT YYLR+R A
Sbjct: 735 ELPQRALIDLAAARTPYIDQSQSLNLFMADPNIGRLSSMYSYAWSSGLKT-TYYLRSRPA 793
Query: 764 ADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
+ TV T+ + D E A V CSL+N E C AC
Sbjct: 794 TRIQQATV-TAATHTIPTQETPRDGE-EAAAVACSLENPEICEAC 836
>gi|145596897|ref|YP_001161194.1| ribonucleoside-diphosphate reductase subunit alpha [Salinispora
tropica CNB-440]
gi|145306234|gb|ABP56816.1| ribonucleoside-diphosphate reductase, alpha subunit [Salinispora
tropica CNB-440]
Length = 909
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 322/828 (38%), Positives = 477/828 (57%), Gaps = 56/828 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G EPV +KI +++ L + DP+ VA K +G+Y G TT +LD L+
Sbjct: 117 MGVRKRNGDTEPVDVNKIVRAVERWVADL--DEVDPLRVATKTISGLYDGATTAELDRLS 174
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLV 116
+TAA + P Y+ LA R+ + + K + SFS++I+ + L+
Sbjct: 175 IQTAAELIGEEPQYSKLAARLLAAYVDKEVRGQQVASFSQSIRYAHGL---------GLI 225
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKM-DSR-VVERPQHMLMRV 174
+D+ + +NA LD A+ D F+YFG +T+ YLL+ SR VVE PQ+ L+RV
Sbjct: 226 SDETAAFVSRNARKLDDAVDPAGDLRFEYFGLRTVADRYLLRHPQSRLVVETPQYWLLRV 285
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ G+ + A+ Y LMS + ++PTLFN+GT Q+SSCFL+ D ++ IY
Sbjct: 286 ACGLSGTPAE-AIGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYQR 344
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG++ +R G+ I GTNG SNGIVP L+ + V+QGG +RK
Sbjct: 345 YHQVAKLSKFSGGIGIAWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRK 403
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLEPWH DI EFL+LR N G++ R +L A W+PD FM RV DG WSL PS
Sbjct: 404 GAACVYLEPWHPDIEEFLELRDNTGEDARRTHNLNLANWLPDEFMRRVEADGDWSLIDPS 463
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
+A L D +G EF+ Y E+ +A + AR L+ ++ + +TG +M FKD N
Sbjct: 464 EAPELPDLYGEEFDAAYRVAEK--KAVRTVKARDLYGRMMRTLAQTGNGWMTFKDRSNTL 521
Query: 415 SNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ + TI SNLCTEI+E ++ ETAVCNL S+ L +V GV
Sbjct: 522 SNQTGEPGNTIHLSNLCTEILEVNNDAETAVCNLGSVNLGAHVTADGV------------ 569
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D+E+L + + L+++ID+N+YP E SN R RP+G+G+ GL D F
Sbjct: 570 --------DWEKLRDTVRTAVVFLDRVIDINYYPAEQAAASNPRWRPVGLGLMGLQDAFF 621
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L LPF+S EA +L+ + E I+ AL+ SA LA + GP+ Y + ++G L ++W
Sbjct: 622 TLRLPFDSAEASELSTRVQEEIFLTALETSAGLAERFGPHPAYAQTRAARGDLHPELWGA 681
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
PS W+ L+ + ++G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 682 VPSQPQRWAGLKARVGEHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGE 741
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ VN +L+ +L GLW+ +++ +I GSV ++E+P E++ +++T WE+ Q+ L+D
Sbjct: 742 FLQVNTYLVGELKARGLWTASIRDQIKRAEGSVQGLAELPAEVRELFRTAWELPQRALID 801
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV- 771
+AA R YIDQSQSLN+ + P GKL+S++ YAW G+KT YYLR+R A + TV
Sbjct: 802 LAAARAPYIDQSQSLNLFLAAPTIGKLSSMYLYAWKSGLKT-TYYLRSRPATRIQQATVA 860
Query: 772 -------DTSVLNNEKANRADNDVEA----NLAQVVCSLKNQEECMAC 808
+V ++ + A + + + + CSL+N E C AC
Sbjct: 861 VTSTAQPGVAVASSAQPGGAASSISGFAGTDAEALACSLENPESCEAC 908
>gi|29829568|ref|NP_824202.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
avermitilis MA-4680]
gi|29606676|dbj|BAC70737.1| putative ribonucleoside-diphosphate reductase alpha chain
[Streptomyces avermitilis MA-4680]
Length = 793
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 320/787 (40%), Positives = 453/787 (57%), Gaps = 47/787 (5%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN- 92
DP VA G +L ELA E AA + P Y+ LA R+ ++ + +
Sbjct: 41 ADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPAYSRLAARLLTISIAEEAASQ 100
Query: 93 ---SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
SFS +I G + LVAD + + + A LD I D F YFG +
Sbjct: 101 GVTSFSASIT---------VGHREGLVADRTADFVRLHTARLDALIDTGADDRFGYFGLR 151
Query: 150 TLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT----DSALKTYHLMSQHWFTHATP 203
TL YLL+ + RV+E PQH ++RV+ G+ +DDT D Y LMS+ + ++P
Sbjct: 152 TLHSRYLLRHPITRRVIETPQHFMLRVASGLAEDDTSHAVDEVAALYGLMSRLDYLPSSP 211
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IR+ GS I
Sbjct: 212 TLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIR 271
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G++
Sbjct: 272 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 330
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV 383
R +L A W+PD FM RV ++G WSLF P+D L D WG EF+ Y + EE G AK
Sbjct: 331 RTHNLNLAHWIPDEFMRRVNENGVWSLFSPADVPELVDLWGDEFDAAYRKAEEAGLAKKT 390
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEET 441
I AR L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E + ET
Sbjct: 391 IPARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHSSNLCTEILEVTDDGET 450
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ N+ V RD D+ERL + L++++D
Sbjct: 451 AVCNLGSV---------------NLGAFVVGRD-----IDWERLDATVRTAVTFLDRVVD 490
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N YP E RSN R RP+G+G GL D F L LPF+SPEAQ L+ I E I A +A
Sbjct: 491 INFYPTEQAGRSNARWRPVGLGAMGLQDVFFKLRLPFDSPEAQALSTRIAERIMLAAYEA 550
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPM 621
SA+LA ++GP + + ++G+L D +++ + W++LRE I+ G+RNSLL+A
Sbjct: 551 SADLAERNGPLPAWEKTRTARGVLHPDHFDVELTWPERWAALRERIAAVGMRNSLLLAIA 610
Query: 622 PTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYE 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +LG+W + +
Sbjct: 611 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDELKQLGVWDAQTREALRES 670
Query: 682 NGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTS 741
GSV + +P++++ +Y+T WEI Q+ L+DMAA R ++DQ+QSLN+ +E P GKL+S
Sbjct: 671 GGSVQGFTWVPQDVRDLYRTAWEIPQRGLIDMAAARTPFLDQAQSLNLFLETPTIGKLSS 730
Query: 742 LHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKN 801
++ YAW G+KT YYLR+R A + + + ++ +A V CSL+N
Sbjct: 731 MYAYAWKSGLKT-TYYLRSRPATRIARAAQAQAQPEKTIPVQQVSEPDA----VACSLEN 785
Query: 802 QEECMAC 808
E C AC
Sbjct: 786 PESCEAC 792
>gi|374986758|ref|YP_004962253.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
bingchenggensis BCW-1]
gi|297157410|gb|ADI07122.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
bingchenggensis BCW-1]
Length = 799
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 323/806 (40%), Positives = 453/806 (56%), Gaps = 56/806 (6%)
Query: 22 LKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRV 81
L KL+ L DP VA G + G +L LA E AA + P+Y+ LA R+
Sbjct: 30 LTKLTADLPA--TDPGKVAAAALRGRHPGSDAAELRTLATEAAAGLIAEEPEYSKLAARL 87
Query: 82 AVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDG---- 133
+ + SFS ++ G + L+AD E + +AA LD
Sbjct: 88 LTLAIAEEAAGQGAVSFSSSVA---------VGHREGLIADGTAEFVTSHAARLDALVDK 138
Query: 134 AIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSAL---- 187
A+ D F YFG +TL YLL+ + +V+E PQH L+RV+ G+ +D + AL
Sbjct: 139 ALADGADDRFGYFGLRTLHSRYLLRHPITRQVIETPQHFLLRVACGLAEDHSQRALDDVA 198
Query: 188 KTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGG 247
+ Y L S + ++PTLFN+GT PQ+SSC+LL D ++ IY+ + A +SK AGG
Sbjct: 199 ELYRLTSTLSYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYNRYHQVARLSKHAGG 258
Query: 248 IGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHAD 307
IGLS IRA GS I GTNG SNGIVP L+ + + V+QGG +RKGA +YLE WHAD
Sbjct: 259 IGLSYSRIRARGSLIRGTNGHSNGIVPFLRTLDASVAAVNQGG-RRKGAACVYLETWHAD 317
Query: 308 IFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEF 367
I EFL+LR N G+E R +L A W+PD FM RV D WSLF P DA L D WG EF
Sbjct: 318 IEEFLELRDNTGEEARRTHNLNIAHWIPDEFMRRVEADADWSLFSPVDAPALVDLWGEEF 377
Query: 368 EHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKS 425
+ Y++ E EG A + AR+L+ ++ + +TG +M FKD+ NR +NQ + + S
Sbjct: 378 DAAYTKAEAEGLAVKTVPARQLYARMMRTLAQTGNGWMTFKDAANRTANQTAEPGRVVHS 437
Query: 426 SNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERL 485
SNLCTEI+E + ETAVCNL S+ L ++ E G D+ RL
Sbjct: 438 SNLCTEILEVTDDGETAVCNLGSVNLAAHLGEDGQ-------------------MDWARL 478
Query: 486 AEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQ 545
+ L++++D+N YP + SN R RP+G+G+ GL D F L LPF+SPEAQQ
Sbjct: 479 DATVRTAVTFLDRVVDINFYPTQEAGASNSRWRPVGLGLMGLQDVFFRLRLPFDSPEAQQ 538
Query: 546 LNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN---ITPSDRWDWSS 602
L+ I E I A +AS LA + GP+ + + ++G+L D + T +RW ++
Sbjct: 539 LSTQISERIMLAAYEASCALAERHGPHPAWSATRTARGVLHPDHYTDAVATWPERW--AA 596
Query: 603 LREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLK 662
LRE ++K+G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+
Sbjct: 597 LRERMAKSGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVN 656
Query: 663 DLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYID 722
DL +LG+W + + NGSV S +P+E++ +Y+T WE+ Q+ L+DMAA R Y+D
Sbjct: 657 DLKKLGVWDAQSREALRESNGSVQDFSWVPKEVRELYRTAWEVPQRALIDMAAARTPYLD 716
Query: 723 QSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKAN 782
QSQSLN+ M P GKL+S++ YAW +G+KT YYLR+R A +
Sbjct: 717 QSQSLNLFMASPTIGKLSSMYAYAWKRGIKT-TYYLRSRP---ATRIAQSARAAAPATVP 772
Query: 783 RADNDVEANLAQVVCSLKNQEECMAC 808
+ + CSL+N E C AC
Sbjct: 773 IPTQQAPVDPEVIACSLENPESCEAC 798
>gi|345848583|ref|ZP_08801603.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
zinciresistens K42]
gi|345639928|gb|EGX61415.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
zinciresistens K42]
Length = 767
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 319/783 (40%), Positives = 452/783 (57%), Gaps = 39/783 (4%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNS 93
DP VA G +L ELA E AA + P Y+ LA R+ + I +
Sbjct: 15 ADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPAYSRLAARLLTLS---IAAEA 71
Query: 94 FSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLER 153
S+ + +G + L+AD + +AA LD + D F YFG +TL
Sbjct: 72 ASQGVTSFTGSVG--TGHREGLIADRTAAFVRTHAARLDALVDPGADDRFGYFGLRTLHS 129
Query: 154 SYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFTHATPTLFN 207
YLL+ + +VVE PQH L+RV+ G+ +DD+ +L+ Y LMS+ + ++PTLFN
Sbjct: 130 RYLLRHPLTRKVVETPQHFLLRVAAGLAEDDSARSLEEVAALYGLMSRLDYLPSSPTLFN 189
Query: 208 AGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNG 267
+GT PQ+SSC+LL D ++ +YD + A +SK AGGIGLS +R+ GS I GTNG
Sbjct: 190 SGTRHPQMSSCYLLDSPKDELDSLYDRYHQVARLSKHAGGIGLSYSRVRSRGSLIRGTNG 249
Query: 268 SSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARD 327
SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G++ R +
Sbjct: 250 HSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDARRTHN 308
Query: 328 LFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISAR 387
L A W+PD FM RV D WSLF PSD L D WG EF+ Y++ E G A+ + AR
Sbjct: 309 LNLAHWIPDEFMRRVDADRPWSLFSPSDVPELVDLWGEEFDAAYAKAEAAGLARRTLPAR 368
Query: 388 KLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL--GTIKSSNLCTEIVEFSSPEETAVCN 445
+L+ ++ + +TG +M FKD+ NR +NQ L + SSNLCTEI+E + ETAVCN
Sbjct: 369 ELYGRMMRTLAQTGNGWMTFKDAANRTANQTALPGNVVHSSNLCTEILEVTDDGETAVCN 428
Query: 446 LASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHY 505
L S+ L +VR+ + D+ERL E + L++++D+N Y
Sbjct: 429 LGSVNLGAFVRDGDL--------------------DWERLDETVRTAVTFLDRVVDINFY 468
Query: 506 PIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAEL 565
P E RSN + RP+G+G GL D F L LPF+SPEA+ L+ I E + A +ASA+L
Sbjct: 469 PTEQAGRSNAKWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTRIAERVMLAAYEASADL 528
Query: 566 AVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTAS 625
A ++GP + + ++G+L D + P+ W++LRE I+ G+RNSLL+A PTA+
Sbjct: 529 AERNGPLPAWEKTRTARGVLHPDHYGTAPAWPERWAALRERIAVTGLRNSLLLAIAPTAT 588
Query: 626 TSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSV 685
+ I G EC EP SN++ R LSGEF+ VN +L+ +L LG+W + + +GSV
Sbjct: 589 IASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDELKALGVWDARTREALRDASGSV 648
Query: 686 SKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFY 745
+ IP +++A+Y+T WEI Q+ L+DMAA R Y+DQSQSLN+ +E P GKL+S++ Y
Sbjct: 649 QDFAWIPADVRALYRTAWEIPQRALIDMAAARTPYLDQSQSLNLFLETPTIGKLSSMYAY 708
Query: 746 AWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEEC 805
AW G+KT YYLR+R A + + R D EA V CSL+N E C
Sbjct: 709 AWKSGLKT-TYYLRSRPATRIARAARAQARPEATVPVRQAADPEA----VACSLENPESC 763
Query: 806 MAC 808
AC
Sbjct: 764 EAC 766
>gi|111184258|gb|ABH08178.1| HSPV074b [Horsepox virus]
Length = 440
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 283/448 (63%), Positives = 335/448 (74%), Gaps = 23/448 (5%)
Query: 219 FLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQV 278
FLL M DDSIEGIYDTLK+CA+ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V
Sbjct: 13 FLLNMMDDSIEGIYDTLKRCALISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRV 72
Query: 279 FNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLF 338
+N+TARY+DQGG KR G AIYLEPWH+DI FLD +KN G E+ R RDLF ALW+PDLF
Sbjct: 73 YNNTARYMDQGGNKRPGVMAIYLEPWHSDIMAFLDFKKNTGNEKHRTRDLFIALWIPDLF 132
Query: 339 MERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQI 398
M+RV+DDG+WSL C + SGL + WG EFE LY+ + + + AR +W I+ SQI
Sbjct: 133 MKRVKDDGEWSLMCLDECSGLNNVWGDEFERLYT-IRKRKEIQDYMKARVVWKAIIESQI 191
Query: 399 ETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREK 458
ETGTP++L+KD+CN+KSNQQNLGTIK SNLCTEI++++ E AVCNLAS+AL +V +
Sbjct: 192 ETGTPFILYKDACNKKSNQQNLGTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVIDG 251
Query: 459 GVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHR 518
FDF +L +V K+I NLNKIID+N+YPI SN RHR
Sbjct: 252 Q--------------------FDFFKLKDVVKVIVRNLNKIIDINYYPIPKAEISNKRHR 291
Query: 519 PIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGS 578
PIGIG+QGLAD FILL PF+S EAQ LNK IFET Y AL AS ELA K+GPYE+Y S
Sbjct: 292 PIGIGVQGLADAFILLNYPFDSLEAQDLNKKIFET--YGALDASCELAEKEGPYESYVRS 349
Query: 579 PMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
S GILQ D+WN+ PSD W+W L++ I G+RNSLLVAPMPTAST+QIL NNE +P
Sbjct: 350 YASNGILQYDLWNVVPSDLWNWKPLKDKIKTYGLRNSLLVAPMPTASTAQILENNESVKP 409
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTE 666
YTSNIYTRRVLSGEF VVN HLL+ LTE
Sbjct: 410 YTSNIYTRRVLSGEFQVVNPHLLRVLTE 437
>gi|294631327|ref|ZP_06709887.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. e14]
gi|292834660|gb|EFF93009.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. e14]
Length = 798
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 320/789 (40%), Positives = 456/789 (57%), Gaps = 51/789 (6%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRV------AVSNLH 87
DP VA G +L ELA E +A + P Y+ LA R+ A +
Sbjct: 46 ADPGRVAAAALRGRSARADEAELRELATEASAGLISEDPAYSRLAARLLTLTIRAEAASQ 105
Query: 88 KITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFG 147
+T+ F+E++ G + L+AD E + +A LD A+ D F YFG
Sbjct: 106 GVTR--FTESVA---------VGHREGLIADRTAEFVRLHAERLDAAVDPAADDRFGYFG 154
Query: 148 FKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFTHA 201
+TL YLL+ + +V+E PQH ++RV+ G+ +D TD A+ Y LMS+ + +
Sbjct: 155 LRTLHSRYLLRHPITRKVIETPQHFMLRVASGLAQDATDHAVDEVTALYGLMSRLDYLPS 214
Query: 202 TPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSY 261
+PTLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIG++ IR+ GS
Sbjct: 215 SPTLFNSGTRHPQMSSCYLLDSPQDELDSIYDRYHQVARLSKHAGGIGIAYSRIRSRGSL 274
Query: 262 IHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKE 321
I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G++
Sbjct: 275 IRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGED 333
Query: 322 ECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAK 381
R +L A WVPD FM RV DG+WSLF PSD L D WG EF+ Y EE G A+
Sbjct: 334 ARRTHNLNLAHWVPDEFMRRVNADGQWSLFSPSDVPELVDLWGAEFDAAYRAAEERGLAR 393
Query: 382 MVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPE 439
+ AR+L+ ++ + +TG +M FKD+ NR +NQ + I SSNLCTEI+E +
Sbjct: 394 KTMPARELYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVIHSSNLCTEILEVTDDG 453
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
ETAVCNL S+ L +VR+ + D+ERL E + L+++
Sbjct: 454 ETAVCNLGSVNLGAFVRDGDI--------------------DWERLDETVRTAVTFLDRV 493
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
+D+N YP E RSN R RP+G+G GL D F L LPF+S A+ L+ I E I A
Sbjct: 494 VDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFKLRLPFDSAGARALSTRIAERIMLAAY 553
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVA 619
+ASA+LA + GP + + ++G+L D ++++ + W++LRE I+ G+RNSLL+A
Sbjct: 554 EASADLAERHGPLPAWEKTRAARGVLHPDHYDVSLTWPERWTALRERIAAVGMRNSLLLA 613
Query: 620 PMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKII 679
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL LG+W + +
Sbjct: 614 IAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVNDLKALGVWDARTREALR 673
Query: 680 YENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKL 739
NGSV + IP +++A+Y+T WEI Q+ L+DMAA R ++DQ+QSLN+ +E P GKL
Sbjct: 674 DSNGSVQDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPFLDQAQSLNLFLETPTIGKL 733
Query: 740 TSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSL 799
+S++ YAW +G+KT YYLR+R A + + + D +A V CSL
Sbjct: 734 SSMYAYAWKQGLKT-TYYLRSRPATRIARAAQGRTPAEAALPAQQTADPDA----VACSL 788
Query: 800 KNQEECMAC 808
+N E C AC
Sbjct: 789 ENPESCEAC 797
>gi|291437352|ref|ZP_06576742.1| class Ia ribonucleotide-diphosphate reductase large subunit chain
[Streptomyces ghanaensis ATCC 14672]
gi|291340247|gb|EFE67203.1| class Ia ribonucleotide-diphosphate reductase large subunit chain
[Streptomyces ghanaensis ATCC 14672]
Length = 793
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 319/787 (40%), Positives = 445/787 (56%), Gaps = 45/787 (5%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN- 92
DP VA G T+L ELA E AA + P Y+ LA R+ + +
Sbjct: 39 ADPGRVAAAALRGRSARADETELRELATEAAAGLISEDPAYSRLAARLLAIGIRAEAASQ 98
Query: 93 ---SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
SF+ ++ +G + L+AD + +A LD I D F YFG +
Sbjct: 99 GVTSFTGSVA---------TGHREGLIADRTAAFVRLHADRLDALIDTGADDRFGYFGLR 149
Query: 150 TLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT----DSALKTYHLMSQHWFTHATP 203
TL YLL+ + +VVE PQH L+RV+ G+ +DD+ D Y LMS+ + ++P
Sbjct: 150 TLHSRYLLRHPITRKVVETPQHFLLRVAAGLAEDDSVRSVDEVAALYGLMSRLDYLPSSP 209
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IR+ GS I
Sbjct: 210 TLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIR 269
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G++
Sbjct: 270 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 328
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV 383
R +L A WVPD FM RV DG WSLF P+D L D WG EF+ +Y EE+G A+
Sbjct: 329 RTHNLNLAHWVPDEFMRRVDADGPWSLFSPADVPELVDLWGEEFDAVYRAAEEKGLARKT 388
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG--TIKSSNLCTEIVEFSSPEET 441
+ AR+L+ ++ + +TG +M FKD+ NR +NQ I SSNLCTEI+E + ET
Sbjct: 389 LPARELYGRMMRTLAQTGNGWMTFKDAANRTANQTATPGHVIHSSNLCTEILEVTDDGET 448
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L +V D+ D+ERL + L++++D
Sbjct: 449 AVCNLGSVNLGAFV------------------DTAAGDIDWERLDRTVRTAVTFLDRVVD 490
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N YP E RSN R RP+G+G GL D F L LPF+SPEA+ L+ I E I A +A
Sbjct: 491 INFYPTEQAGRSNARWRPVGLGAMGLQDVFFKLRLPFDSPEARTLSTRIAERIMLAAYEA 550
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPM 621
SA+LA GP + + ++G+L D +++ + W +LR I+ G+RNSLL+A
Sbjct: 551 SADLAEDKGPLPAWEKTRTARGVLHPDHYDVDLTWPERWVALRGRIASTGLRNSLLLAIA 610
Query: 622 PTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYE 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL LG+W + +
Sbjct: 611 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVSDLKRLGVWDERTREALREA 670
Query: 682 NGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTS 741
GSV + IP++++ +Y+T WEI Q++L+D AA R ++DQ+QSLN+ ME P GKL+S
Sbjct: 671 GGSVQGFAWIPDDVRRLYRTAWEIPQRSLIDTAAARTPFLDQAQSLNLFMETPTIGKLSS 730
Query: 742 LHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKN 801
++ YAW +G+KT YYLR+R A + + EA V CSL+N
Sbjct: 731 MYAYAWKQGLKT-TYYLRSRPATRIARAAQAQPQAQTTVPVQQPTPDEA----VACSLEN 785
Query: 802 QEECMAC 808
E C AC
Sbjct: 786 PESCEAC 792
>gi|355717365|gb|AES05909.1| ribonucleotide reductase M1 [Mustela putorius furo]
Length = 434
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/430 (63%), Positives = 344/430 (80%), Gaps = 8/430 (1%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKRDGR+E V FDKIT+R++KL YGL+ + DP + KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AETAA +T HPDYA+LA R+AVSNLHK TK FS+ ++D+YNY N +G+ + +VA
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVAKST 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I++ N L+ AIIYDRDF ++YFGFKTLERSYLLK++ +V ERPQHMLMRVSVGIH+
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHE 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
+D D+A++TY+L+S+ WFTHA+PTLFNAGT +PQLSSCFLL MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKR------K 294
ISKSAGGIG+++ IRA+GSYI GTNG+SNG+VPML+V+N+TARYVDQGG KR
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIX 300
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GAFAIYLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV + WSL CP+
Sbjct: 301 GAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPN 360
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDS--CN 412
+ GL + WG EFE LY YE++GR + V+ A++LW+ I+ SQ ETGTPYML+KDS +
Sbjct: 361 ECPGLDEVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSRATS 420
Query: 413 RKSNQQNLGT 422
R Q N T
Sbjct: 421 RTWEQSNAAT 430
>gi|302558497|ref|ZP_07310839.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
griseoflavus Tu4000]
gi|302476115|gb|EFL39208.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
griseoflavus Tu4000]
Length = 796
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 319/787 (40%), Positives = 448/787 (56%), Gaps = 50/787 (6%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN- 92
DP VA G +L ELA E AA + P Y+ LA R+ + +
Sbjct: 47 ADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPAYSRLAARLLTIGIRAEAASQ 106
Query: 93 ---SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
SF+ ++ +G + L+AD + +A LD + D F YFG +
Sbjct: 107 GVTSFTGSVA---------TGHREGLIADRTAAFVRLHAERLDALVDTRADDRFGYFGLR 157
Query: 150 TLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDD----TDSALKTYHLMSQHWFTHATP 203
TL YLL+ + +VVE PQH L+RV+ G+ +DD D Y LMS+ + ++P
Sbjct: 158 TLHSRYLLRHPVTRKVVETPQHFLLRVAAGLAEDDGARSVDEVAALYGLMSRLDYLPSSP 217
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IRA GS I
Sbjct: 218 TLFNSGTRHPQMSSCYLLDSPQDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGSLIR 277
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G++
Sbjct: 278 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 336
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV 383
R +L A WVPD FM RV D WSLF P+D GL D WG EF+ Y E +G A+
Sbjct: 337 RTHNLNLAHWVPDEFMRRVDADAPWSLFSPADVPGLVDLWGEEFDAAYRAAEAQGLARRT 396
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEET 441
+ AR+L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E + ET
Sbjct: 397 LPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTAEPGHVVHSSNLCTEILEVTDDGET 456
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L +V D D+ERL E + L++++D
Sbjct: 457 AVCNLGSVNLGAFV------------------DQAAGDLDWERLDETVRTAVTFLDRVVD 498
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N+YP E RSN R RP+G+G GL D L LPF+SPEA+ L+ I E I A +
Sbjct: 499 INYYPTEQAGRSNARWRPVGLGAMGLQDVLFRLRLPFDSPEAKALSTRIAERIMLAAYET 558
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPM 621
SA+LA + GP + + ++G+L D ++ + W++LR I+ G+RNSLL+A
Sbjct: 559 SADLAERSGPLPAWEKTRTARGVLHPDHYDTELTWPERWAALRARIAAVGMRNSLLLAIA 618
Query: 622 PTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYE 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L++DL LG+W + +
Sbjct: 619 PTATIASIAGAYECIEPQVSNLFKRETLSGEFLQVNSYLVEDLKRLGVWDARTREALREA 678
Query: 682 NGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTS 741
GSV + IPE+++ +Y+T WEI Q+ L+DMAA R ++DQ+QSLN+ +E P GKL+S
Sbjct: 679 GGSVQDFAWIPEDVRRLYRTAWEIPQRGLIDMAAARTPFLDQAQSLNLFLETPTIGKLSS 738
Query: 742 LHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKN 801
++ +AW +G+KT YYLR+R A + T+V +A D EA V CSL+N
Sbjct: 739 MYVHAWKQGLKT-TYYLRSRPATRIARAAARTTV-----PVQAGPDPEA----VACSLEN 788
Query: 802 QEECMAC 808
E C AC
Sbjct: 789 PESCEAC 795
>gi|408680595|ref|YP_006880422.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Streptomyces venezuelae ATCC 10712]
gi|328884924|emb|CCA58163.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Streptomyces venezuelae ATCC 10712]
Length = 792
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 322/787 (40%), Positives = 450/787 (57%), Gaps = 48/787 (6%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN-- 92
DP VA G +L ELA E AA + P Y+ LA R+ +
Sbjct: 40 DPGKVAAAALRGRSAAADEAELRELATEAAAGLIAEDPAYSRLAARLLTVTIADEAAGQG 99
Query: 93 --SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKT 150
SFS ++ G + L+AD E + +A LD I D F YFG +T
Sbjct: 100 AFSFSASVA---------VGHREGLIADRTAEFVALHADRLDATIDPAGDDRFGYFGLRT 150
Query: 151 LERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFTHATPT 204
L YLL+ + +V+E PQH ++RV+ G+ +DD+ AL Y LMS+ + ++PT
Sbjct: 151 LYSRYLLRHPITRKVIETPQHFMLRVACGLAEDDSVRALDEVSALYGLMSRLDYLPSSPT 210
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IRA GS I G
Sbjct: 211 LFNSGTRHPQMSSCYLLDSPQDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGSLIRG 270
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHADI EFL+LR N G++ R
Sbjct: 271 TNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEDARR 329
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVI 384
+L A W+PD FM RV D WSLF P+D L D WG EF+ Y + E G A+ +
Sbjct: 330 THNLNLAHWIPDEFMRRVNADADWSLFSPADVPELVDLWGEEFDAAYRKAEAAGLARKTM 389
Query: 385 SARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEETA 442
AR L+ ++ + +TG +M FKD+ NR +NQ + T+ SSNLCTEI+E + ETA
Sbjct: 390 PARDLYGRMMRTLAQTGNGWMTFKDASNRTANQTAEPGHTVHSSNLCTEILEVTDDGETA 449
Query: 443 VCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDV 502
VCNL S+ L +V VGS D+ERL + L++++D+
Sbjct: 450 VCNLGSVNLGAFV--------------VGSD------IDWERLDATVRTAVTFLDRVVDI 489
Query: 503 NHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKAS 562
N YP E RSN R RP+G+G GL D F L LPF+S EA+ L+ I E I A +AS
Sbjct: 490 NFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLKLPFDSAEARALSTRIAERIMLAAYEAS 549
Query: 563 AELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMP 622
A+LA ++GP + + ++G+L D +++ + W++LRE I+ G+RNSLL+A P
Sbjct: 550 ADLAERNGPLPAWEKTRTARGVLHPDHYDVELNWPERWAALRERIAAVGMRNSLLLAIAP 609
Query: 623 TASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYEN 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +LG+W + + N
Sbjct: 610 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDELKKLGVWDAQTREALRESN 669
Query: 683 GSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSL 742
GSV+ + +P E++ +Y+T WEI Q+ L+DMAA R ++DQSQSLN+ +E P GKL+S+
Sbjct: 670 GSVAGFTWVPAEVRELYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTIGKLSSM 729
Query: 743 HFYAWSKGMKTGMYYLRTR-AAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKN 801
+ YAW +G+KT YYLR+R A A +A D +A + CSL+N
Sbjct: 730 YAYAWKQGLKT-TYYLRSRPATRIARAAQAAAPAAATIPVQQATPDADA----LACSLEN 784
Query: 802 QEECMAC 808
E C AC
Sbjct: 785 PESCEAC 791
>gi|329939693|ref|ZP_08288994.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
griseoaurantiacus M045]
gi|329301263|gb|EGG45158.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
griseoaurantiacus M045]
Length = 811
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 319/793 (40%), Positives = 454/793 (57%), Gaps = 39/793 (4%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN- 92
DP VA G + +L ELA E AA + P ++ LA R+ + +
Sbjct: 39 ADPGRVAAAALRGRSRHAGEEELRELATEAAAGLISEDPAHSRLAARLLTLTIRAEAASQ 98
Query: 93 ---SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
SF+ ++ +G + LVAD + ++AA LD + D D F YFG +
Sbjct: 99 GVTSFTSSVA---------TGHREGLVADRTAAFVRRHAARLDALVDPDADDRFGYFGLR 149
Query: 150 TLERSYLLK--MDSRVVERPQHMLMRVSVGIHKD------DTDSALKT----YHLMSQHW 197
TL YLL+ + +V+E PQH L+RV+ G+ ++ D A++ + LMS+
Sbjct: 150 TLHTRYLLRHPVTRKVIETPQHFLLRVASGLAEEADRAGAGADRAVEEVAALHGLMSRLE 209
Query: 198 FTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRA 257
+ ++PTLFN+GT PQ+SSCFLL +D ++ IY + A +SK AGGIGL+ IR+
Sbjct: 210 YLPSSPTLFNSGTRHPQMSSCFLLDSPEDELDSIYSRYHQVARLSKHAGGIGLAYSRIRS 269
Query: 258 SGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKN 317
G+ I GTNG S GIVP L+ + + V+QGG +RKGA A+YLE WHADI EFL+LR N
Sbjct: 270 RGALIRGTNGHSGGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDN 328
Query: 318 QGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE 377
G++ R +L A W+PD FM RV D +WSLF PSD GL D WG EF+ Y E E
Sbjct: 329 TGEDARRTHNLNLAHWIPDEFMRRVEADAQWSLFSPSDVPGLTDLWGAEFDAAYRAAEAE 388
Query: 378 GRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEF 435
G A + AR+L+ ++ + TGT +M FKD+ NR +NQ + I SSNLCTEI+E
Sbjct: 389 GLAVRTLPARELYGRMMRTLASTGTGWMTFKDTANRTANQTAEPGNVIHSSNLCTEILEV 448
Query: 436 SSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITEN 495
+ ETAVCNL SI L +VRE + + + D+ERL +
Sbjct: 449 TEDGETAVCNLGSINLGAFVREG-----NTADAGTADAGAADGGIDWERLDATVRTAVTF 503
Query: 496 LNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIY 555
L+++ID+N YP E RSN R RP+G+G+ GL D L LPF+SPEA+ L+ I E +
Sbjct: 504 LDRVIDLNFYPTEEAGRSNARWRPVGLGVMGLQDVLFRLRLPFDSPEARALSARIAERLM 563
Query: 556 YHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNS 615
A + SAELA ++GP + + ++G+L D +++ S W++LR I+ G+RN+
Sbjct: 564 LTAYETSAELAARNGPLPAWERTRTARGVLHPDHYDVELSWPERWAALRRRIAVTGMRNA 623
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALK 675
LL+A PTA+ + I G +EC EP SN++ R LSGEF+ VN +L+ DL LG W +
Sbjct: 624 LLLAIAPTATIASIAGVHECVEPQVSNLFKRETLSGEFLQVNPYLVADLKRLGRWDADTR 683
Query: 676 TKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPD 735
+ NGSV ++ +PEE++ +Y+T WE+ Q+ L+DMAA R ++DQ+QSLN+ +E P
Sbjct: 684 EALREANGSVEGLTWLPEEVRRLYRTAWELPQRALIDMAAARTPFLDQAQSLNLFLETPT 743
Query: 736 HGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQV 795
GKL+S++ YAW G+KT YYLR+R A + A D EA V
Sbjct: 744 IGKLSSMYAYAWKSGLKT-TYYLRSRPATRIARAARAQRPAAEAPAPTVP-DPEA----V 797
Query: 796 VCSLKNQEECMAC 808
CSL+N E C AC
Sbjct: 798 ACSLENPEYCEAC 810
>gi|429196117|ref|ZP_19188103.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
ipomoeae 91-03]
gi|428668195|gb|EKX67232.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
ipomoeae 91-03]
Length = 806
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 322/797 (40%), Positives = 447/797 (56%), Gaps = 56/797 (7%)
Query: 34 CDPVLVAQKVCAGVYKGVT----TTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKI 89
DP VA G T T +L ELA E +A + P Y+ LA R+ +
Sbjct: 43 ADPGRVAAAALRGRSARGTFDEVTAELRELATEASAGLISEDPAYSKLAARLLAIGIRAE 102
Query: 90 TKN----SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDY 145
+ +F+E+I G + LVAD E + +A LD + D F Y
Sbjct: 103 AASQGVTTFTESIA---------VGHREGLVADRTAEFVRVHAERLDALVDPAADDRFGY 153
Query: 146 FGFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKD----------DTDSALKTYHLM 193
FG +TL YLL+ + +V+E PQH ++RV+ G+ +D D Y LM
Sbjct: 154 FGLRTLHSRYLLRHPITRKVIETPQHFMLRVASGLAEDTALDARTGTRSVDEVAALYGLM 213
Query: 194 SQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIH 253
S+ + ++PTLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS
Sbjct: 214 SRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYS 273
Query: 254 NIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLD 313
IR+ GS I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+
Sbjct: 274 RIRSRGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLE 332
Query: 314 LRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQ 373
LR N G++ R +L A W+PD FM RV D +WSLF P+D L D WG EF+ Y +
Sbjct: 333 LRDNTGEDARRTHNLNLAHWIPDEFMRRVNADERWSLFSPADVPELVDLWGEEFDAAYRK 392
Query: 374 YEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG--TIKSSNLCTE 431
E +G AK I AR L+ ++ + +TG +M FKD+ NR +NQ + SSNLCTE
Sbjct: 393 AEADGLAKKTIPARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEAGRVVHSSNLCTE 452
Query: 432 IVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKI 491
I+E + ETAVCNL S+ L +V D D+ERL E +
Sbjct: 453 ILEVTDDGETAVCNLGSVNLGAFV------------------DQATGDLDWERLDETVRT 494
Query: 492 ITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIF 551
L++++D+N YP E RSN R RP+G+G GL D F L LPF+SPEA+ L+ I
Sbjct: 495 AVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFKLRLPFDSPEAKALSTRIA 554
Query: 552 ETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNG 611
E I A + S +LA +DGP + + ++G+L D + + + W++LRE I+ G
Sbjct: 555 ERIMLAAYETSTDLAERDGPLPAWEKTRTARGVLHPDHYGVEFTWPERWAALRERIATTG 614
Query: 612 VRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWS 671
+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L++DL LG+W
Sbjct: 615 MRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVQDLKALGVWD 674
Query: 672 HALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHM 731
+ + NGSV + IP +++A+Y+T WEI Q+ L+DMAA R Y+DQSQSLN+ +
Sbjct: 675 ARTREALRDSNGSVQDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPYLDQSQSLNLFL 734
Query: 732 EQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEAN 791
E P GKL+S++ YAW G+KT YYLR+R A + +S +A D
Sbjct: 735 ETPTIGKLSSMYAYAWKSGLKT-TYYLRSRPATRIARAAGSSSAAATPVPVQATAD---- 789
Query: 792 LAQVVCSLKNQEECMAC 808
V CSL+N E C AC
Sbjct: 790 -DAVACSLENPESCEAC 805
>gi|297202282|ref|ZP_06919679.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sviceus ATCC 29083]
gi|197710198|gb|EDY54232.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sviceus ATCC 29083]
Length = 796
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 329/821 (40%), Positives = 463/821 (56%), Gaps = 63/821 (7%)
Query: 12 PVRFDKITARLKKLSYGLSKE--HCDPVLVAQKVCAG-VYKGVTT---TQLDELAAETAA 65
PV D A L + L+ + DP VA G +G + +L ELA E AA
Sbjct: 14 PVDEDGPGAALLRTLTALTADLPDADPGRVAAAALRGRSARGASAEMIAELRELATEAAA 73
Query: 66 AMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIM 125
+ P Y+ LA R+ + I + S+ + + G + L+AD E +
Sbjct: 74 GLISEDPAYSRLAARLLTVS---IAAEAASQGVTSFTG--SVAVGHREGLIADRTAEFVR 128
Query: 126 KNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT 183
+A LD + + D F YFG +TL YLL+ + +V+E PQH ++RV+ G+ DDT
Sbjct: 129 VHAERLDALVDTEADDRFGYFGLRTLYSRYLLRHPITRKVIETPQHFMLRVASGL-ADDT 187
Query: 184 -----------DSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIY 232
D Y LMS+ + ++PTLFN+GT PQ+SSC+LL D ++ IY
Sbjct: 188 VLDSETGAHALDEVAALYRLMSRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPKDELDSIY 247
Query: 233 DTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGK 292
D + A +SK AGGIG+S IR+ GS I GTNG SNGIVP L+ + + V+QGG +
Sbjct: 248 DRYHQVANLSKHAGGIGISYSRIRSRGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-R 306
Query: 293 RKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFC 352
RKGA A+YLE WH+DI EFL+LR N G++ R +L A WVPD FM RV D +WSLF
Sbjct: 307 RKGAAAVYLETWHSDIEEFLELRDNTGEDARRTHNLNLAHWVPDEFMRRVNADAEWSLFS 366
Query: 353 PSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCN 412
P+D L D WG EF+ Y + E EG A+ I AR L+ ++ + +TG +M FKD+ N
Sbjct: 367 PADVPELVDLWGEEFDAAYRKAEAEGLARRTIPARDLYGRMMRTLAQTGNGWMTFKDAAN 426
Query: 413 RKSNQQNLG--TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
R +NQ L T+ SSNLCTEI+E + ETAVCNL S+ L +V
Sbjct: 427 RTANQTALPGHTVHSSNLCTEILEVTDDGETAVCNLGSVNLGAFV--------------- 471
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D+ + D+ERL + L++++D+N YP E RSN + RP+G+G GL D
Sbjct: 472 ---DTTSGDIDWERLDATVRTAVTFLDRVVDINFYPTEQAGRSNAKWRPVGLGAMGLQDV 528
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
F L LPF+SPEA+ L+ I E I A +ASA+LA + GP + + ++G+L D +
Sbjct: 529 FFKLRLPFDSPEARALSTRIAERIMLAAYEASADLAERSGPLPAWEKTRTAQGVLHPDHY 588
Query: 591 NITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLS 650
+ W++LRE ++ G+RNSLL+A PTA+ + I G EC EP SN++ R LS
Sbjct: 589 ATDLAWPERWAALRERMAVTGLRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLS 648
Query: 651 GEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTL 710
GEF+ VN +L+ +L +LG+W + + NGSV + IPE+++A+Y+T WEI Q+ L
Sbjct: 649 GEFLQVNSYLVAELKKLGVWDARTREALREANGSVQGFAWIPEDVRALYRTAWEIPQRGL 708
Query: 711 VDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAA---ADAI 767
+DMAA R ++DQ+QSLN+ +E P GKL+S++ YAW G+KT YYLR+R A A A
Sbjct: 709 IDMAAARTPFLDQAQSLNLFLETPTIGKLSSMYAYAWKSGLKT-TYYLRSRPATRIARAA 767
Query: 768 KFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
+ TV E A V CSL+N E C AC
Sbjct: 768 QATVPVQQPAPEDA-------------VACSLENPESCEAC 795
>gi|295836583|ref|ZP_06823516.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SPB74]
gi|197697283|gb|EDY44216.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SPB74]
Length = 790
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 316/788 (40%), Positives = 453/788 (57%), Gaps = 48/788 (6%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRV----AVSNLHKI 89
DP VA G +L ELA E AA + P Y+ LA R+ V+
Sbjct: 37 TDPGRVAAAALRGRSAHADEAELRELATEAAAGLISEDPAYSRLAARLLAIGIVAEAAGQ 96
Query: 90 TKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
+ F+ ++ G + L+ D E + +AA LD I + D F YFG +
Sbjct: 97 GASGFAASVA---------VGHREGLIGDRTAEFVATHAARLDALIDPEGDDRFGYFGLR 147
Query: 150 TLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT----DSALKTYHLMSQHWFTHATP 203
TL YLL+ + +V+E PQH L+RV+ G+ DD+ D Y LMS+ + ++P
Sbjct: 148 TLYSRYLLRHPITRQVIETPQHFLLRVAAGLAADDSLPAVDEVASLYRLMSRLDYLPSSP 207
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFN+GT PQ+SSC+LL D ++ IY+ + A +SK AGGIG++ IR+ GS I
Sbjct: 208 TLFNSGTRHPQMSSCYLLDSPKDELDSIYERYLQVARLSKHAGGIGIAYSRIRSRGSLIR 267
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G+++
Sbjct: 268 GTNGHSNGIVPFLKTLDSSVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDQR 326
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV 383
R L A W+PD FM RV DG+WSLF P+D L D WG EFE Y E +G A+
Sbjct: 327 RTHHLNLAHWIPDEFMRRVAADGEWSLFSPADVPELTDLWGEEFEAAYRAAEAKGLARKT 386
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEET 441
+ AR+L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E + ET
Sbjct: 387 MPARELYGRMMRTLAQTGQGWMTFKDHSNRTANQTAEPGSVVHSSNLCTEIIEVTDDGET 446
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL SI L +V +N D+ERL E + L++++D
Sbjct: 447 AVCNLGSINLGAFV--------------------ENGEIDWERLDETVRTAVTFLDRVVD 486
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N YP SN R RP+G+G GL D F L LPF+S A+ ++ I E I A +A
Sbjct: 487 INFYPTGQAANSNARWRPVGLGAMGLQDVFFKLRLPFDSAAAKAVSTRIAERIMLAAYEA 546
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPM 621
SA+LA K GP + + ++G+L D +++ + W +LR I+K G+RNSLL+A
Sbjct: 547 SADLAEKHGPVPAWEKTRTARGVLHPDHFDVERTWPERWEALRARIAKTGMRNSLLLAIA 606
Query: 622 PTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYE 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L++DL +LG+W + +
Sbjct: 607 PTATIASIAGVYECVEPQVSNLFKRETLSGEFLQVNGYLVEDLKKLGVWDARTREALREA 666
Query: 682 NGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTS 741
NGSV + IPE+++A+Y+T WE+ Q+ L+DMAA+R ++DQSQSLN+ ME P GKL+S
Sbjct: 667 NGSVQGFNWIPEDVRALYRTAWELPQRGLIDMAAERTAFLDQSQSLNLFMETPTIGKLSS 726
Query: 742 LHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE-KANRADNDVEANLAQVVCSLK 800
++ +AW+KG+KT YYLR+R A + ++ + +A D +A + CSL+
Sbjct: 727 MYAHAWNKGLKT-TYYLRSRPATRIARAAGSSAAASAPIPVQQAVPDADA----IACSLE 781
Query: 801 NQEECMAC 808
N E C AC
Sbjct: 782 NPESCEAC 789
>gi|453055153|gb|EMF02600.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
mobaraensis NBRC 13819 = DSM 40847]
Length = 805
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 319/796 (40%), Positives = 453/796 (56%), Gaps = 56/796 (7%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN-- 92
DP VA G + G +L LA E AA + P+Y+ LA R+ + +
Sbjct: 43 DPGKVAAAALRGRHPGSDEAELRSLATEAAAGLISEEPEYSRLAARLLTLAIAEEAAGQG 102
Query: 93 --SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFD----FDYF 146
SFS ++ +G + L+ADD + ++A LD + F YF
Sbjct: 103 AVSFSASVA---------TGHREGLIADDTAAFVREHAERLDALVDAALADGADDRFGYF 153
Query: 147 GFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALK----TYHLMSQHWFTH 200
G +TL YLL+ + V+E PQH L+RV+ G+ +D + AL+ Y L S +
Sbjct: 154 GLRTLHSRYLLRHPITRNVIETPQHFLLRVACGLAEDHSVRALEDVAELYRLTSTLSYLP 213
Query: 201 ATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGS 260
++PTLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IR+ GS
Sbjct: 214 SSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGS 273
Query: 261 YIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGK 320
I GTNG SNGIVP L+ + + V+QGG +RKGA +YLE WHADI EFL+LR N G+
Sbjct: 274 LIRGTNGHSNGIVPFLRTLDASVAAVNQGG-RRKGAACVYLETWHADIEEFLELRDNTGE 332
Query: 321 EECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRA 380
E R +L A W+PD FM RV D WSLF P+D L D +G EF+ Y +YE EG+A
Sbjct: 333 EARRTHNLNIAHWIPDEFMRRVEADADWSLFSPADTPDLVDLYGDEFDAAYRRYEAEGKA 392
Query: 381 KMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSP 438
I AR L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E ++
Sbjct: 393 VKTIPARVLYARMMRTLAQTGNGWMTFKDAANRTANQTAEPGQVVHSSNLCTEILEVTND 452
Query: 439 EETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNK 498
ETAVCNL S+ L ++ G D+E+L + L++
Sbjct: 453 GETAVCNLGSVNLAAHLGADGE-------------------MDWEKLDRTVRTAVTFLDR 493
Query: 499 IIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHA 558
++D+N YP E SN R RP+G+G+ GL D F L LPF+SPEA+ L+ I E I A
Sbjct: 494 VVDINFYPTEQAGSSNSRWRPVGLGLMGLQDVFFRLRLPFDSPEAKALSTRISERIMLAA 553
Query: 559 LKASAELAVKDGPYETYFGSPMSKGILQVDMW-NITPSDRWDWSSLREMISKNGVRNSLL 617
+ASA+LA + GP+ + + ++G+L D + N P+ W +LR I+ G+RNSLL
Sbjct: 554 YEASADLAERHGPHPAWSATRTARGVLHPDHYPNTEPTWAERWDALRARIASVGMRNSLL 613
Query: 618 VAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTK 677
+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L++DL +LG+W A +
Sbjct: 614 LAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNTYLVEDLKKLGVWDRATRDA 673
Query: 678 IIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHG 737
+ NGS+ ++ IP+E++ +Y+T WEI Q+ L+DMAA R Y+DQSQSLN+ M P G
Sbjct: 674 MTDANGSIQDMAWIPQEVRDLYRTAWEIPQRALIDMAAARTPYLDQSQSLNLFMASPTIG 733
Query: 738 KLTSLHFYAWSKGMKTGMYYLRTRAAA-----DAIKFTVDTSVLNNEKANRADNDVEANL 792
KL+S++ YAW +G+KT YYLR+R A + +S +A D +A
Sbjct: 734 KLSSMYAYAWKQGIKT-TYYLRSRPATRIARAASGGAAASSSAPATVPVQQAAPDADA-- 790
Query: 793 AQVVCSLKNQEECMAC 808
+ CSL+N E C AC
Sbjct: 791 --IACSLENPESCEAC 804
>gi|357411277|ref|YP_004923013.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
flavogriseus ATCC 33331]
gi|320008646|gb|ADW03496.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
flavogriseus ATCC 33331]
Length = 797
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 324/813 (39%), Positives = 465/813 (57%), Gaps = 63/813 (7%)
Query: 19 TARLKKLSYGLSKE--HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYAL 76
TA L+ L+ GL+ + DP VA G +L LA E AA + P Y+
Sbjct: 24 TALLRTLT-GLTADLPDTDPGRVAAAALRGRNARSDEAELRSLATEAAAGLISEDPSYSR 82
Query: 77 LAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLD 132
LA R+ + SFS ++ G + L+AD E + +AA LD
Sbjct: 83 LAARLLTRAVADEAAGQGAVSFSASVA---------VGHREGLIADRTAEFVTLHAAALD 133
Query: 133 G----AIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSA 186
A+ D F YFG +TL YLL+ + +V E PQH ++RV+ G+ +D ++ A
Sbjct: 134 ALVDRALADGADDRFGYFGLRTLHSRYLLRHPLTRQVTETPQHFMLRVAAGLAEDTSERA 193
Query: 187 LKT----YHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIIS 242
L+ Y LM++ + ++PTLFN+GT PQ+SSC+LL D ++ IYD + A +S
Sbjct: 194 LEEVAALYGLMNRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPMDELDSIYDRYHQVARLS 253
Query: 243 KSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLE 302
K AGGIGLS IRA GS I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE
Sbjct: 254 KHAGGIGLSYSRIRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLE 312
Query: 303 PWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADS 362
WHADI EFL+LR N G+++ R +L A W+PD FM RV D +WSLF P+DA L D
Sbjct: 313 TWHADIEEFLELRDNTGEDQRRTHNLNLAHWIPDEFMRRVDADTQWSLFSPADAPELVDL 372
Query: 363 WGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNL 420
WG EF+ Y E +G A+ + AR+L+ ++ + +TG +M FKD+ NR +NQ +
Sbjct: 373 WGDEFDAAYRAAEAKGLARRTLPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPG 432
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
+ SSNLCTEI+E + ETAVCNL S+ L +V E +
Sbjct: 433 RVVHSSNLCTEILEVTDDGETAVCNLGSVNLGAFVAEGTI-------------------- 472
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+ERL + L++++D+N YP E RSN R RP+G+G GL D F L LPF+S
Sbjct: 473 DWERLDATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDS 532
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN--ITPSDRW 598
PEA+ L+ I E I A +AS +LA + GP + + ++G+L D ++ + +RW
Sbjct: 533 PEARALSTKISERIMLAAYEASCDLAERSGPLPAWSETRAARGVLHPDHYDTELHWPERW 592
Query: 599 DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNK 658
D +LR +++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN
Sbjct: 593 D--ALRARVARTGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNA 650
Query: 659 HLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRG 718
+L+ +L +LG+W + + +GSV + IPE+++A+Y+T WEI Q+ L+DMAA R
Sbjct: 651 YLVDELKKLGVWDARTREALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAART 710
Query: 719 CYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN 778
++DQSQSLN+ +E P GKL+S++ YAW +G+KT YYLR+R A + +
Sbjct: 711 PFLDQSQSLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQAPAAA 769
Query: 779 E---KANRADNDVEANLAQVVCSLKNQEECMAC 808
+A+ D D + CSL+N E C AC
Sbjct: 770 TVPVQASAPDADA------LACSLENPESCEAC 796
>gi|297192179|ref|ZP_06909577.1| class Ia ribonucleotide-diphosphate reductase large subunit protein
[Streptomyces pristinaespiralis ATCC 25486]
gi|297151244|gb|EDY64084.2| class Ia ribonucleotide-diphosphate reductase large subunit protein
[Streptomyces pristinaespiralis ATCC 25486]
Length = 800
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 317/786 (40%), Positives = 448/786 (56%), Gaps = 52/786 (6%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITK--- 91
DP VA G G +L LA E AA + P Y+ LA R+ + +
Sbjct: 54 DPGKVAAAALRGRNAGSDAAELHSLATEAAAGLISEDPAYSRLAARLLTRTIAEEAAGQG 113
Query: 92 -NSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKT 150
+SF+ ++ +G + L+AD + +AA LD I D F YFG +T
Sbjct: 114 ASSFTASVA---------TGHREGLIADRTAAFVALHAARLDALIDLGADDRFGYFGLRT 164
Query: 151 LERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFTHATPT 204
L YLL+ + +V+E PQH ++RV+ G+ +DD+ AL+ Y LMS+ + ++PT
Sbjct: 165 LYSRYLLRHPITRQVIETPQHFMLRVACGLAEDDSPRALEEVAALYRLMSRLDYLPSSPT 224
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT PQ+SSC+LL D ++ IY + A +SK AGGIGLS IRA GS I G
Sbjct: 225 LFNSGTRHPQMSSCYLLDSPLDELDSIYGRYHQVARLSKHAGGIGLSYSRIRARGSLIRG 284
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHADI EFL+LR N G++ R
Sbjct: 285 TNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEDARR 343
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVI 384
+L A W+PD FM RV D +WSLF P D L D WG +F+ Y + E G A+ +
Sbjct: 344 THNLNLAHWIPDEFMRRVEADAQWSLFSPVDVPELVDLWGEDFDAAYRRAEAAGLARRTV 403
Query: 385 SARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEETA 442
SAR L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E + ETA
Sbjct: 404 SARDLYGRMMRTLAQTGNGWMTFKDASNRTANQTAEPGRVVHSSNLCTEILEVTDDGETA 463
Query: 443 VCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDV 502
VCNL S+ L +V G+ D+ERL + L++++D+
Sbjct: 464 VCNLGSVNLGAFVSGDGI--------------------DWERLDATVRTAVTFLDRVVDI 503
Query: 503 NHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKAS 562
N YP E RSN R RP+G+G GL D F L LPF+S EA+ L+ I E I A +AS
Sbjct: 504 NFYPTEQAGRSNARWRPVGLGAMGLQDVFFKLRLPFDSAEARALSTRIAERIMLAAYEAS 563
Query: 563 AELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMP 622
+LA ++GP + + ++G+L D ++ T + W +LR ++ G+RNSLL+A P
Sbjct: 564 CDLAERNGPLPAWAETRTARGVLHPDHYDTTLNWPERWEALRARVAAVGMRNSLLLAIAP 623
Query: 623 TASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYEN 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL LG+W + + +
Sbjct: 624 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDDLKRLGVWDAQTREALREAS 683
Query: 683 GSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSL 742
GSV + +PEE++A+Y+T WEI Q+ L+DMAA R ++DQSQSLN+ +E P GKL+S+
Sbjct: 684 GSVQGFTWVPEEIRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTIGKLSSM 743
Query: 743 HFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQ 802
+ YAW +G+KT YYLR+R A I +V + D V CSL+N
Sbjct: 744 YAYAWKQGLKT-TYYLRSRPATR-IARAASAAVPVPAQVTPED--------AVACSLENP 793
Query: 803 EECMAC 808
E C AC
Sbjct: 794 ESCEAC 799
>gi|38344004|emb|CAC17631.2| class I ribonucleotide-diphosphate reductase large chain
[Streptomyces microflavus]
Length = 793
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 317/787 (40%), Positives = 453/787 (57%), Gaps = 48/787 (6%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN- 92
DP VA G + G T +L ELA E AA + P Y+ LA R+ + +
Sbjct: 42 TDPGRVAAAALRGRHPGSDTAELRELATEAAAGLIAEDPAYSRLAARLLTLTIAEEAAGQ 101
Query: 93 ---SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
SFSE++ +G + L+A+ E +A LD AI D F YFG +
Sbjct: 102 GAVSFSESVA---------TGHREGLIAERTAEFAALHADRLDSAIDPAGDDRFGYFGLR 152
Query: 150 TLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFTHATP 203
TL YLL+ + +V+E PQH ++ V+ G+ +DD+ AL Y LMS+ + ++P
Sbjct: 153 TLYSRYLLRHPITRKVIETPQHFMLGVAAGLAEDDSVRALDEVTALYGLMSRLDYLPSSP 212
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGL+ IRA GS I
Sbjct: 213 TLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLAYSRIRARGSLIR 272
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHADI EFL+LR N G++
Sbjct: 273 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEDAR 331
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV 383
R +L A W+PD FM RV D WSLF P+D L D +G EF+ Y E +G A+
Sbjct: 332 RTHNLNLAHWIPDEFMRRVNADADWSLFSPADVPELVDLYGAEFDAAYVAAEAKGLARKT 391
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEET 441
+ AR+L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E + ET
Sbjct: 392 MPARELYGRMMRTLAQTGNGWMTFKDASNRTANQTAEPGSVVHSSNLCTEIIEVTDDGET 451
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L +V D+ + D+ERL + L++++D
Sbjct: 452 AVCNLGSVKLGAFV------------------DTASGELDWERLDATVRTAVTFLDRVVD 493
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N YP E RSN R RP+G+G GL D F L LPF+S EA+ L+ I E I A +A
Sbjct: 494 INFYPTEQAGRSNSRWRPVGLGAMGLQDVFFQLKLPFDSAEARALSTRISERIMLAAYEA 553
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPM 621
SA+LA ++GP + + ++G+L D +++ + W++LR I++ G+RNSLL+A
Sbjct: 554 SADLAERNGPLPAWDKTRTARGVLHHDHYDVELTWPERWAALRARIAEVGMRNSLLLAIA 613
Query: 622 PTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYE 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L LG+W + +
Sbjct: 614 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLVDELKRLGVWDAETREALRES 673
Query: 682 NGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTS 741
+GSV + +P E +A+Y+T WEI Q+ L+DMAA R ++DQ+QSLN+ ME P GKL+S
Sbjct: 674 SGSVQDFAWVPAETRALYRTAWEIPQRGLIDMAAARTPFLDQAQSLNLFMETPTIGKLSS 733
Query: 742 LHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKN 801
++ YAW +G+KT YYLR+R A I + ++ D D + CSL+N
Sbjct: 734 MYAYAWKQGLKT-TYYLRSRPAT-RIARAARAAAPVPAQSQAPDADA------IACSLEN 785
Query: 802 QEECMAC 808
E C AC
Sbjct: 786 PESCEAC 792
>gi|302521844|ref|ZP_07274186.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SPB78]
gi|302430739|gb|EFL02555.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SPB78]
Length = 790
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 317/788 (40%), Positives = 450/788 (57%), Gaps = 48/788 (6%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVA----VSNLHKI 89
DP VA G +L ELA E AA + P Y+ LA R+ V
Sbjct: 37 TDPGRVAAAALRGRSAHADEAELRELATEAAAGLISEDPAYSRLAARLLALAIVEEAAGQ 96
Query: 90 TKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
+ F+ ++ G + L+ D E + +AA LD I D F YFG +
Sbjct: 97 GASGFAASVA---------VGHREGLIGDRTAEFVAAHAARLDALIDTGGDDRFGYFGLR 147
Query: 150 TLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT----DSALKTYHLMSQHWFTHATP 203
TL YLL+ + +VVE PQ+ L+RV+ G+ DD+ D Y LMS+ + ++P
Sbjct: 148 TLYSRYLLRHPITRKVVETPQYFLLRVAAGLAADDSLPAVDEVASLYRLMSRLDYLPSSP 207
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFN+GT PQ+SSC+LL D ++ IY+ + A +SK AGGIG++ IR+ GS I
Sbjct: 208 TLFNSGTRHPQMSSCYLLDSPKDELDSIYERYLQVARLSKHAGGIGIAYSRIRSRGSLIR 267
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G+++
Sbjct: 268 GTNGHSNGIVPFLKTLDSSVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDQR 326
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV 383
R L A W+PD FM RV D +WSLF P+D L D WG EFE Y E +G A+
Sbjct: 327 RTHHLNLAHWIPDEFMRRVAADAEWSLFSPADVPELTDLWGEEFEAAYRAAEAKGLARKT 386
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEET 441
I AR+L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E + ET
Sbjct: 387 IPARELYGRMMRTLAQTGQGWMTFKDHSNRTANQTAEPGSVVHSSNLCTEIIEVTDDGET 446
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL SI L +V N D+ERL E + L++++D
Sbjct: 447 AVCNLGSINLGAFV--------------------DNGTIDWERLDETVRTAVTFLDRVVD 486
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N YP + SN R RP+G+G GL D F L LPF+S EA+ ++ I E I A +A
Sbjct: 487 INFYPTDEAANSNARWRPVGLGAMGLQDVFFKLRLPFDSAEAKAVSTRIAERIMLAAYEA 546
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPM 621
SA+LA K GP + + ++G+L D +++ + W +LR I+++G+RNSLL+A
Sbjct: 547 SADLAEKHGPVPAWEKTRTARGVLHPDHYDVERTWPERWEALRARIARSGMRNSLLLAIA 606
Query: 622 PTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYE 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L++DL +LG+W + +
Sbjct: 607 PTATIASIAGVYECVEPQVSNLFKRETLSGEFLQVNGYLVEDLKKLGVWDARTREALREA 666
Query: 682 NGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTS 741
NGSV + IPEE++A+Y+T WE+ Q+ L+DMAA+R ++DQSQSLN+ ME P GKL+S
Sbjct: 667 NGSVQGFNWIPEEVRALYRTAWELPQRGLIDMAAERTAFLDQSQSLNLFMETPTIGKLSS 726
Query: 742 LHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE-KANRADNDVEANLAQVVCSLK 800
++ +AW+KG+KT YYLR+R A + + ++ D EA + CSL+
Sbjct: 727 MYAHAWNKGLKT-TYYLRSRPATRIARAAGSPAAEAAPIPVQQSVPDAEA----IACSLE 781
Query: 801 NQEECMAC 808
N E C AC
Sbjct: 782 NPESCEAC 789
>gi|455647608|gb|EMF26550.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
gancidicus BKS 13-15]
Length = 772
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 312/783 (39%), Positives = 444/783 (56%), Gaps = 45/783 (5%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNS 93
DP VA G +L ELA E AA + P Y+ LA R+ I +
Sbjct: 26 ADPGRVAAAALRGRSAAADEAELRELATEAAAGLISEDPAYSRLAARLLT---LAIRAEA 82
Query: 94 FSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLER 153
S+ + + +G + L+AD + +AA LD I D F YFG +TL
Sbjct: 83 ASQGVTSFTG--SVATGHREGLIADRTAAFVRLHAARLDALIDTGADDRFGYFGLRTLHS 140
Query: 154 SYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFTHATPTLFN 207
YLL+ + +VVE PQH L+RV+ G+ +DD+ AL+ Y LMS+ + ++PTLFN
Sbjct: 141 RYLLRHPVTRKVVETPQHFLLRVACGLAEDDSARALEEVAALYGLMSRLDYLPSSPTLFN 200
Query: 208 AGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNG 267
+GT PQ+SSC+LL D ++ +Y+ + A +SK AGGIGLS +RA GS I GTNG
Sbjct: 201 SGTRHPQMSSCYLLDSPADELDSLYERYHQVARLSKHAGGIGLSFSRVRARGSLIRGTNG 260
Query: 268 SSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARD 327
SNGIVP L+ + + V+QGG +RKGA A+YLE WHADI EFL+LR N G++ R +
Sbjct: 261 HSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEDARRTHN 319
Query: 328 LFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISAR 387
L A WVPD FM RV DD WSLF P D L D WG EF+ Y E +G A+ + AR
Sbjct: 320 LNLAHWVPDEFMRRVADDAPWSLFSPVDVPELVDLWGEEFDAAYRAAEAKGLARRTLPAR 379
Query: 388 KLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCN 445
+L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E + ETAVCN
Sbjct: 380 ELYGRMMRTLAQTGNGWMTFKDTANRTANQTAEPGHVVHSSNLCTEILEVTDDGETAVCN 439
Query: 446 LASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHY 505
L S+ L + G+ D+ERL + L++++D+N Y
Sbjct: 440 LGSVNLAAFADGDGM--------------------DWERLDAAVRTAVTFLDRVVDINFY 479
Query: 506 PIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAEL 565
P E RSN R RP+G+G+ GL D + LPF+SPEA++L+ I E I A + SA L
Sbjct: 480 PTEEASRSNSRWRPVGLGVMGLQDVLFRMRLPFDSPEARELSTRIAERIMLAAYETSAAL 539
Query: 566 AVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTAS 625
A + GP + + ++G+L D + + + W++LR I+ G+RN+LL+A PTA+
Sbjct: 540 AERHGPLPAWEKTRTARGVLHPDHYGVELAWPERWAALRTRIAATGLRNALLLAIAPTAT 599
Query: 626 TSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSV 685
+ I G EC EP SN++ R LSGEF+ VN +L++DL LG+W + + GSV
Sbjct: 600 IASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVEDLKRLGVWDARTREALREAGGSV 659
Query: 686 SKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFY 745
+ IPE+++ +Y+T WEI Q+ L+DMAA R ++DQ+QSLN+ +E P GKL+S++ Y
Sbjct: 660 QDFAWIPEDVRRLYRTAWEIPQRGLIDMAAARTPFLDQAQSLNLFLETPTIGKLSSMYAY 719
Query: 746 AWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEEC 805
AW +G+KT YYLR+R A + + A+ V CSL+N E C
Sbjct: 720 AWKQGLKT-TYYLRSRPATRIARAARAAVPVQQ----------PADPQAVACSLENPESC 768
Query: 806 MAC 808
AC
Sbjct: 769 EAC 771
>gi|441155686|ref|ZP_20966845.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
rimosus subsp. rimosus ATCC 10970]
gi|440617881|gb|ELQ80968.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
rimosus subsp. rimosus ATCC 10970]
Length = 817
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 320/796 (40%), Positives = 452/796 (56%), Gaps = 55/796 (6%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRV----AVSNLHKIT 90
DP +A G + G +L LA E AA + + P Y+ LA R+
Sbjct: 54 DPGKIAAAALRGRHAGSDEAELRSLAMEAAAGLIGDEPQYSKLAARLLTRAIAEEAAAEG 113
Query: 91 KNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDG----AIIYDRDFDFDYF 146
+FS ++ +G + L+ADD E + +AA LD A+ D F YF
Sbjct: 114 ATAFSASVA---------TGHREGLIADDTAEFVRTHAARLDALVDRALADGADDRFGYF 164
Query: 147 GFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSAL----KTYHLMSQHWFTH 200
G +TL YLL+ + +V+E PQH L+RV+ G+ +D ++ A+ + Y L S +
Sbjct: 165 GLRTLHSRYLLRHPISRQVIETPQHFLLRVACGLAEDHSERAVDDVAELYRLTSTLSYLP 224
Query: 201 ATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGS 260
++PTLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS +RA GS
Sbjct: 225 SSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRVRARGS 284
Query: 261 YIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGK 320
I GTNG SNGIVP L+ + + V+QGG +RKGA +YLE WHAD+ EFL+LR N G+
Sbjct: 285 LIRGTNGHSNGIVPFLRTLDASVAAVNQGG-RRKGAACVYLETWHADLEEFLELRDNTGE 343
Query: 321 EECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRA 380
+ R +L A W+PD FM RV D WSLF PSD L D +G EF+ Y + E G A
Sbjct: 344 DARRTHNLNIAHWIPDEFMRRVEADADWSLFSPSDVPELVDLYGDEFDTAYRKAEAAGLA 403
Query: 381 KMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSP 438
+ AR L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E +
Sbjct: 404 VKQVPARILYARMMRTLAQTGNGWMTFKDAANRTANQTAEPGKVVHSSNLCTEILEVTDD 463
Query: 439 EETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNK 498
ETAVCNL S+ L + L + D+ERL + L++
Sbjct: 464 GETAVCNLGSVNL--------------AAHLGNEANGWEEAMDWERLDATVRTAVTFLDR 509
Query: 499 IIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHA 558
++D+N YP E SN R RP+G+G+ GL D F L L F+SPEA++L+ I E I A
Sbjct: 510 VVDINFYPTEQAGASNSRWRPVGLGLMGLQDVFFRLRLGFDSPEARELSTRISERIMLAA 569
Query: 559 LKASAELAVKDGPYETYFGSPMSKGILQVDMW-NITPSDRW--DWSSLREMISKNGVRNS 615
+ASA+LA + GP+ + + ++G+L D + N P RW W++LR I+ G+RNS
Sbjct: 570 YEASADLAERHGPHPAWSATRTARGVLHPDHYPNAEP--RWADRWAALRTRIAATGMRNS 627
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALK 675
LL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+++L LGLW +
Sbjct: 628 LLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLIEELKALGLWDERTR 687
Query: 676 TKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPD 735
+ NGSV ++ IP E++ +Y+T WEI Q+ L+DMAADR Y+DQSQSLN+ M P
Sbjct: 688 DALREGNGSVQELDWIPAEIRELYRTAWEIPQRALIDMAADRTPYLDQSQSLNLFMASPT 747
Query: 736 HGKLTSLHFYAWSKGMKTGMYYLRTRAA---ADAIKFTVDTSVLNNEKANRADNDVEANL 792
GKL+S++ YAW +G+KT YYLR+R A A + + T + AD +
Sbjct: 748 IGKLSSMYAYAWKRGIKT-TYYLRSRPATRIAQSARGTGGGAQPAPVPTQAADPEA---- 802
Query: 793 AQVVCSLKNQEECMAC 808
V CSL+N E C AC
Sbjct: 803 --VACSLENPESCEAC 816
>gi|318060205|ref|ZP_07978928.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SA3_actG]
gi|318077112|ref|ZP_07984444.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SA3_actF]
Length = 767
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 317/788 (40%), Positives = 450/788 (57%), Gaps = 48/788 (6%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVA----VSNLHKI 89
DP VA G +L ELA E AA + P Y+ LA R+ V
Sbjct: 14 TDPGRVAAAALRGRSAHADEAELRELATEAAAGLISEDPAYSRLAARLLALAIVEEAAGQ 73
Query: 90 TKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
+ F+ ++ G + L+ D E + +AA LD I D F YFG +
Sbjct: 74 GASGFAASVA---------VGHREGLIGDRTAEFVAAHAARLDALIDTGGDDRFGYFGLR 124
Query: 150 TLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT----DSALKTYHLMSQHWFTHATP 203
TL YLL+ + +VVE PQ+ L+RV+ G+ DD+ D Y LMS+ + ++P
Sbjct: 125 TLYSRYLLRHPITRKVVETPQYFLLRVAAGLAADDSLPAVDEVASLYRLMSRLDYLPSSP 184
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFN+GT PQ+SSC+LL D ++ IY+ + A +SK AGGIG++ IR+ GS I
Sbjct: 185 TLFNSGTRHPQMSSCYLLDSPKDELDSIYERYLQVARLSKHAGGIGIAYSRIRSRGSLIR 244
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G+++
Sbjct: 245 GTNGHSNGIVPFLKTLDSSVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDQR 303
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV 383
R L A W+PD FM RV D +WSLF P+D L D WG EFE Y E +G A+
Sbjct: 304 RTHHLNLAHWIPDEFMRRVAADAEWSLFSPADVPELTDLWGEEFEAAYRAAEAKGLARKT 363
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEET 441
I AR+L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E + ET
Sbjct: 364 IPARELYGRMMRTLAQTGQGWMTFKDHSNRTANQTAEPGSVVHSSNLCTEIIEVTDDGET 423
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL SI L +V N D+ERL E + L++++D
Sbjct: 424 AVCNLGSINLGAFV--------------------DNGTIDWERLDETVRTAVTFLDRVVD 463
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N YP + SN R RP+G+G GL D F L LPF+S EA+ ++ I E I A +A
Sbjct: 464 INFYPTDEAANSNARWRPVGLGAMGLQDVFFKLRLPFDSAEAKAVSTRIAERIMLAAYEA 523
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPM 621
SA+LA K GP + + ++G+L D +++ + W +LR I+++G+RNSLL+A
Sbjct: 524 SADLAEKHGPVPAWEKTRTARGVLHPDHYDVERTWPERWEALRARIARSGMRNSLLLAIA 583
Query: 622 PTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYE 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L++DL +LG+W + +
Sbjct: 584 PTATIASIAGVYECVEPQVSNLFKRETLSGEFLQVNGYLVEDLKKLGVWDARTREALREA 643
Query: 682 NGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTS 741
NGSV + IPEE++A+Y+T WE+ Q+ L+DMAA+R ++DQSQSLN+ ME P GKL+S
Sbjct: 644 NGSVQGFNWIPEEVRALYRTAWELPQRGLIDMAAERTAFLDQSQSLNLFMETPTIGKLSS 703
Query: 742 LHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNE-KANRADNDVEANLAQVVCSLK 800
++ +AW+KG+KT YYLR+R A + + ++ D EA + CSL+
Sbjct: 704 MYAHAWNKGLKT-TYYLRSRPATRIARAAGSPAAEAAPIPVQQSVPDAEA----IACSLE 758
Query: 801 NQEECMAC 808
N E C AC
Sbjct: 759 NPESCEAC 766
>gi|254384640|ref|ZP_04999979.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces sp.
Mg1]
gi|194343524|gb|EDX24490.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces sp.
Mg1]
Length = 797
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 318/792 (40%), Positives = 453/792 (57%), Gaps = 56/792 (7%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN-- 92
DP VA G +L LA E AA + P Y+ LA R+ +
Sbjct: 43 DPGRVAAAALRGRSAAADEAELRSLATEAAAGLISEDPAYSRLAARLLTLAVRDEAAGQG 102
Query: 93 --SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIY----DRDFDFDYF 146
SFS ++ G + L+AD + +AA LD + Y D F +F
Sbjct: 103 ATSFSASVA---------VGHREGLIADRTAAFVEAHAARLDALVEYTLAEGADDRFGFF 153
Query: 147 GFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFTH 200
G +TL YLL+ + +VVE PQH ++RV+ G+ D++ A++ Y LMS+ +
Sbjct: 154 GLRTLHSRYLLRHPITRQVVETPQHFMLRVACGLAADESVQAVEEVASLYRLMSRLDYLP 213
Query: 201 ATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGS 260
++PTLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IRA GS
Sbjct: 214 SSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 273
Query: 261 YIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGK 320
I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHADI EFL+LR N G+
Sbjct: 274 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 332
Query: 321 EECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRA 380
++ R +L A WVPD FM RV D WSLF P+D L D WG +F+ Y + E +G A
Sbjct: 333 DQRRTHNLNLAHWVPDEFMRRVNADADWSLFSPADVPELVDLWGDDFDAAYRKAEADGLA 392
Query: 381 KMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ-QNLGTI-KSSNLCTEIVEFSSP 438
+ + AR L+ ++ + +TG +M FKD+ NR +NQ GT+ SSNLCTEI+E ++
Sbjct: 393 RKTMPARDLYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGTVVHSSNLCTEIIEVTND 452
Query: 439 EETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNK 498
ETAVCNL S+ L +V ++ D+ERL E + L++
Sbjct: 453 GETAVCNLGSVNLGAFVL------------------TETGEIDWERLDETVRTAVTFLDR 494
Query: 499 IIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHA 558
++D+N YP E RSN R RP+G+G GL D F L LPF+SPEA+ L+ + E I A
Sbjct: 495 VVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFKLKLPFDSPEAKALSTKLSERIMLAA 554
Query: 559 LKASAELAVKDGPYETYFGSPMSKGILQVDMWN--ITPSDRWDWSSLREMISKNGVRNSL 616
+AS +LA + GP + + ++G+L D ++ + +RWD +LR ++++G+RNSL
Sbjct: 555 YEASCDLAERSGPLPAWEQTRTARGVLHPDHYDTELNWPERWD--ALRARVAESGMRNSL 612
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKT 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+++L +LG+W +
Sbjct: 613 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNGYLVEELKKLGVWDAQSRE 672
Query: 677 KIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDH 736
+ +GSV IP E++ +Y+T WEI Q+ L+DMAA R ++DQSQSLN+ +E P
Sbjct: 673 ALREASGSVQGFGWIPAEVRELYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTI 732
Query: 737 GKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVV 796
GKL+S++ YAW +G+KT YYLR+R A K +A D EA +
Sbjct: 733 GKLSSMYAYAWKQGLKT-TYYLRSRP---ATKIARAAQAATPVALPQAVVDAEA----LA 784
Query: 797 CSLKNQEECMAC 808
CSL+N E C AC
Sbjct: 785 CSLENPESCEAC 796
>gi|333024514|ref|ZP_08452578.1| putative ribonucleoside-diphosphate reductase, alpha subunit
[Streptomyces sp. Tu6071]
gi|332744366|gb|EGJ74807.1| putative ribonucleoside-diphosphate reductase, alpha subunit
[Streptomyces sp. Tu6071]
Length = 790
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 316/788 (40%), Positives = 449/788 (56%), Gaps = 48/788 (6%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVA----VSNLHKI 89
DP VA G +L ELA E AA + P Y+ LA R+ V
Sbjct: 37 TDPGRVAAAALRGRSAHADEAELRELATEAAAGLISEDPAYSRLAARLLALAIVEEAAGQ 96
Query: 90 TKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
+ F+ ++ G + L+ D E + +AA LD + D F YFG +
Sbjct: 97 GASGFAASVA---------VGHREGLIGDRTAEFVAAHAARLDALVDTGGDDRFGYFGLR 147
Query: 150 TLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT----DSALKTYHLMSQHWFTHATP 203
TL YLL+ + +VVE PQ+ L+RV+ G+ DD+ D Y LMS+ + ++P
Sbjct: 148 TLYSRYLLRHPITRKVVETPQYFLLRVAAGLAADDSLPAVDEVASLYRLMSRLDYLPSSP 207
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFN+GT PQ+SSC+LL D ++ IY+ + A +SK AGGIG++ IR+ GS I
Sbjct: 208 TLFNSGTRHPQMSSCYLLDSPKDELDSIYERYLQVARLSKHAGGIGIAYSRIRSRGSLIR 267
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G+++
Sbjct: 268 GTNGHSNGIVPFLKTLDSSVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDQR 326
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV 383
R L A W+PD FM RV D +WSLF P+D L D WG EFE Y E +G A+
Sbjct: 327 RTHHLNLAHWIPDEFMRRVAADAEWSLFSPADVPELTDLWGEEFEAAYRAAEAKGLARKT 386
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEET 441
I AR+L+ ++ + +TG +M FKD NR +NQ + + SSNLCTEI+E + ET
Sbjct: 387 IPARELYGRMMRTLAQTGQGWMTFKDHSNRTANQTAEPGSVVHSSNLCTEIIEVTDDGET 446
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL SI L +V N D+ERL E + L++++D
Sbjct: 447 AVCNLGSINLGAFV--------------------DNGTIDWERLDETVRTAVTFLDRVVD 486
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N YP + SN R RP+G+G GL D F L LPF+S EA+ ++ I E I A +A
Sbjct: 487 INFYPTDEAANSNARWRPVGLGAMGLQDVFFKLRLPFDSAEAKAVSTRIAERIMLAAYEA 546
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPM 621
S +LA K GP + + ++G+L D +++ + W +LR I+++G+RNSLL+A
Sbjct: 547 SVDLAEKHGPVPAWEKTRTARGVLHPDHYDVERTWPERWEALRARIARSGMRNSLLLAIA 606
Query: 622 PTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYE 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L++DL +LG+W + +
Sbjct: 607 PTATIASIAGVYECVEPQVSNLFKRETLSGEFLQVNGYLVEDLKKLGVWDARTREALREA 666
Query: 682 NGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTS 741
NGSV + IPEE++A+Y+T WE+ Q+ L+DMAA+R ++DQSQSLN+ ME P GKL+S
Sbjct: 667 NGSVQGFNWIPEEVRALYRTAWELPQRGLIDMAAERTAFLDQSQSLNLFMETPTIGKLSS 726
Query: 742 LHFYAWSKGMKTGMYYLRTRAAAD-AIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLK 800
++ +AW+KG+KT YYLR+R A A + ++ D EA + CSL+
Sbjct: 727 MYAHAWNKGLKT-TYYLRSRPATRIARAAGAPAAEAAPIPVQQSVPDAEA----IACSLE 781
Query: 801 NQEECMAC 808
N E C AC
Sbjct: 782 NPESCEAC 789
>gi|254388986|ref|ZP_05004217.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
clavuligerus ATCC 27064]
gi|294814922|ref|ZP_06773565.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
ATCC 27064]
gi|326443294|ref|ZP_08218028.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
clavuligerus ATCC 27064]
gi|197702704|gb|EDY48516.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
clavuligerus ATCC 27064]
gi|218078698|emb|CAB90707.4| class Ia ribonucleotide-diphosphate reductase large subunit chain
[Streptomyces clavuligerus ATCC 27064]
gi|294327521|gb|EFG09164.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
ATCC 27064]
Length = 810
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 318/786 (40%), Positives = 449/786 (57%), Gaps = 47/786 (5%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN-- 92
DP VA G + G +L LA + AA + P Y+ LA R+ + ++
Sbjct: 59 DPGRVAAAALRGRHPGSDAAELRGLATDAAAGLIAEDPAYSRLAARLLTLTIGDEARSQG 118
Query: 93 --SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKT 150
SFS ++ G L+AD + ++A LD I D D F YFG +T
Sbjct: 119 AVSFSASVA---------VGHTEGLIADRTAAFVALHSARLDALIDLDADDRFGYFGLRT 169
Query: 151 LERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSAL----KTYHLMSQHWFTHATPT 204
L YLL+ + +VVE PQH ++RV+ G+ +DDT+ AL Y LMS+ + ++PT
Sbjct: 170 LYSRYLLRHPITRKVVETPQHFMLRVACGLAEDDTERALDEVAALYRLMSRLDYLPSSPT 229
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT PQ+SSC+LL D ++ IY + A +SK AGGIGLS IR+ GS I G
Sbjct: 230 LFNSGTRHPQMSSCYLLDSPQDELDSIYGRYHQVARLSKHAGGIGLSYSRIRSRGSLIRG 289
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHADI EFL+LR N G++ R
Sbjct: 290 TNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEDARR 348
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVI 384
+L A W+PD FM RV+ D +WSLF P+D L D WG EF+ Y + E G A+ +
Sbjct: 349 THNLNLAHWIPDEFMRRVQADTEWSLFSPADVPELVDLWGDEFDAAYRKAEAAGLARRTL 408
Query: 385 SARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG--TIKSSNLCTEIVEFSSPEETA 442
AR+L+ ++ + +TG +M FKD+ NR +NQ L T+ SSNLCTEI+E + ETA
Sbjct: 409 PARELYGRMMRTLAQTGNGWMTFKDASNRTANQTALPGHTVHSSNLCTEILEVTDDGETA 468
Query: 443 VCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDV 502
VCNL S+ N+ V D D+ERL + L++++D+
Sbjct: 469 VCNLGSV---------------NLGAFVSGGD-----IDWERLDATVRTAVTFLDRVVDI 508
Query: 503 NHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKAS 562
N YP E RSN + RP+G+G GL D F L LPF+S EA+ L+ I E I A +AS
Sbjct: 509 NFYPTEQAGRSNTKWRPVGLGAMGLQDVFFQLRLPFDSAEARALSTRIAERIMLAAYEAS 568
Query: 563 AELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMP 622
A+LA + GP + + ++G+L D + + W++LRE ++ G+RNSLL+A P
Sbjct: 569 ADLAERHGPLPAWEKTRTARGVLHPDHYGVEQHWPERWAALRERVATTGMRNSLLLAIAP 628
Query: 623 TASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYEN 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L LG+W + + +
Sbjct: 629 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVAELKRLGVWDAQTREALRDAS 688
Query: 683 GSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSL 742
GS+ + +P+E++ +Y+T WEI Q+ L+DMAA R YIDQSQSLN+ ME P GKL+S+
Sbjct: 689 GSIQGFNWVPDEVRELYRTAWEIPQRGLIDMAAARTPYIDQSQSLNLFMETPTIGKLSSM 748
Query: 743 HFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQ 802
+ YAW +G+KT YYLR+R A + T+ +A V CSL+N
Sbjct: 749 YAYAWKQGLKT-TYYLRSRPATRIARAASGTAAAAPATVPVQQVPQDA----VACSLENP 803
Query: 803 EECMAC 808
E C AC
Sbjct: 804 ESCEAC 809
>gi|386845601|ref|YP_006263614.1| ribonucleoside-diphosphate reductase subunit alpha [Actinoplanes
sp. SE50/110]
gi|359833105|gb|AEV81546.1| ribonucleoside-diphosphate reductase alpha chain [Actinoplanes sp.
SE50/110]
Length = 822
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 308/771 (39%), Positives = 453/771 (58%), Gaps = 44/771 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M V KR+G EPV +KI +++ GL + DP+ VA K +G+Y G TT +LD+L+
Sbjct: 18 MRVRKRNGEFEPVDVNKIVTAVERWITGL--DEVDPLRVATKTISGLYDGATTEELDKLS 75
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITK----NSFSETIKDMYNYYNKRSGKKASLV 116
+TAA + P Y+ LA R+ + + + + +FSE+I+ G L+
Sbjct: 76 IQTAAELIGEEPQYSRLAARLLIDLVEQEVREQGATTFSESIE---------LGFAQGLI 126
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMD-SRV-VERPQHMLMRV 174
DD + ++ + A LD A+ D F+YFG +T+ YLL+ RV VE PQ+ LMRV
Sbjct: 127 GDDAHAFVVAHRAELDAAVDVANDLRFEYFGLRTVADRYLLRHPIKRVPVETPQYFLMRV 186
Query: 175 SVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ G+ + A+ Y LM+ + ++PTLFN+GT Q+SSCFL+ D ++ IY+
Sbjct: 187 ACGLSQT-AQEAIGFYRLMASLAYLPSSPTLFNSGTRHTQMSSCFLVDSPKDELDSIYER 245
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG++ +R G+ I GTNG SNGIVP L+ + V+QGG +RK
Sbjct: 246 YHQVAKLSKFSGGIGIAWSRVRGRGALIRGTNGKSNGIVPFLKTLDAGVAAVNQGG-RRK 304
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA +YLEPWH D+ EFL+LR N G+E R +L A W+PD FM RV D WSL PS
Sbjct: 305 GAACVYLEPWHPDVEEFLELRDNTGEESRRTHNLNLANWIPDEFMRRVEADEDWSLIDPS 364
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRK 414
DA L D +G F Y E++ K I AR+L+ ++ + +TG +M FKD N
Sbjct: 365 DAPELPDLFGDAFTEAYRIAEKKAVKK--IKARELYGRMMRTLAQTGNGWMTFKDRSNAL 422
Query: 415 SNQQNL--GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
SNQ TI SNLCTEI+E +S +ETAVCNL SI L + GV
Sbjct: 423 SNQTGAPGNTIHLSNLCTEILEVNSDDETAVCNLGSINLGAHTTADGV------------ 470
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D+ERL + L+++ID+N+YP + SN R RP+G+G+ GL D F
Sbjct: 471 --------DWERLRATVRTAVVFLDRVIDINYYPSQQAAVSNPRWRPVGLGLMGLQDAFF 522
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L LPF+SP A++L+ + E I+ +L+ASA LA + G + Y + ++G L ++W
Sbjct: 523 TLRLPFDSPAAKELSTRVQEEIFLTSLEASAGLAEQFGAHPAYAETRAAQGDLHPELWGA 582
Query: 593 TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGE 652
+ W++++E I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 583 PMTQGARWAAVKERIAAHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGE 642
Query: 653 FIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVD 712
F+ +N +L+++L GLW+ ++ I GSV I+ +P ++K I++T WE+ Q+ L+D
Sbjct: 643 FLQINNYLVRELKSRGLWTPEIREAIKRAEGSVQDIAALPADVKEIFRTAWELPQRALID 702
Query: 713 MAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAA 763
+AA R +IDQSQSLN+ + P GKL+S++ YAW G+KT YYLR+R A
Sbjct: 703 LAAARAPFIDQSQSLNLFLAAPTIGKLSSMYLYAWKSGLKTS-YYLRSRPA 752
>gi|365866749|ref|ZP_09406353.1| putative ribonucleoside-diphosphate reductase large subunit
[Streptomyces sp. W007]
gi|364003828|gb|EHM24964.1| putative ribonucleoside-diphosphate reductase large subunit
[Streptomyces sp. W007]
Length = 773
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 317/796 (39%), Positives = 453/796 (56%), Gaps = 61/796 (7%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN-- 92
DP VA G +L LA E AA + P Y+ LA R+ +
Sbjct: 16 DPGRVAAAALRGRNARSDEAELRSLATEAAAGLISEDPAYSRLAARLLTRTIADEAAGQG 75
Query: 93 --SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLD----GAIIYDRDFDFDYF 146
SFS ++ G + L+AD + ++A LD A+ D F YF
Sbjct: 76 ATSFSASVA---------VGHREGLIADRTAAFVALHSAALDRLVEQALADGADDRFGYF 126
Query: 147 GFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSAL----KTYHLMSQHWFTH 200
G +TL YLL+ + +V+E PQH ++RV+ G+ +D++ AL Y LMS+ +
Sbjct: 127 GLRTLHSRYLLRHPLTRQVIETPQHFMLRVAAGLAEDESARALDEVAALYGLMSRLDYLP 186
Query: 201 ATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGS 260
++PTLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IRA GS
Sbjct: 187 SSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 246
Query: 261 YIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGK 320
I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHADI EFL+LR N G+
Sbjct: 247 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 305
Query: 321 EECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRA 380
++ R +L A W+PD FM RV D +WSLF P+D L D WG F+ Y E +G A
Sbjct: 306 DQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPADVPELVDLWGDAFDAAYRAAEAKGLA 365
Query: 381 KMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSP 438
+ I AR+L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E +
Sbjct: 366 RRTIPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGRVVHSSNLCTEILEVTDD 425
Query: 439 EETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNK 498
ETAVCNL S+ L +V + + D++RL + L++
Sbjct: 426 GETAVCNLGSVNLGAFVADGSI--------------------DWDRLDATVRTAVTFLDR 465
Query: 499 IIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHA 558
++D+N YP E RSN R RP+G+G GL D F L LPF+SPEA+ L+ I E I A
Sbjct: 466 VVDINFYPTEQAGRSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTRISERIMLAA 525
Query: 559 LKASAELAVKDGPYETYFGSPMSKGILQVDMW--NITPSDRWDWSSLREMISKNGVRNSL 616
+AS +LA + GP + + ++G+L D + + +RWD +LR I+K G+RNSL
Sbjct: 526 YEASCDLAERSGPLPAWSETRAARGVLHPDHYATELNWPERWD--ALRARIAKTGMRNSL 583
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKT 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +LG+W +
Sbjct: 584 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLVDELKQLGVWDARTRE 643
Query: 677 KIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDH 736
+ +GSV + IPE+++A+Y+T WEI Q+ L+DMAA R ++DQSQSLN+ +E P
Sbjct: 644 ALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTI 703
Query: 737 GKLTSLHFYAWSKGMKTGMYYLRTRAAA----DAIKFTVDTSVLNNEKANRADNDVEANL 792
GKL+S++ YAW +G+KT YYLR+R A A + + ++A+ D D
Sbjct: 704 GKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQASAAAPIPVQQASAPDADA---- 758
Query: 793 AQVVCSLKNQEECMAC 808
+ CSL+N E C AC
Sbjct: 759 --IACSLENPESCEAC 772
>gi|149916692|ref|ZP_01905194.1| ribonucleoside-diphosphate reductase, alpha subunit [Plesiocystis
pacifica SIR-1]
gi|149822409|gb|EDM81798.1| ribonucleoside-diphosphate reductase, alpha subunit [Plesiocystis
pacifica SIR-1]
Length = 792
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 313/757 (41%), Positives = 440/757 (58%), Gaps = 32/757 (4%)
Query: 56 LDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASL 115
LDEL A TA V PDY+ LA R+ I + + S+ + N + + + L
Sbjct: 63 LDELLARTAVGWIVEEPDYSKLAARILAG---AIAREAASQGVTSFLN--SVETLHRLGL 117
Query: 116 VADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS--RVVERPQHMLMR 173
+AA L+ A+ + D F+YFG +T+ YL++ RV+E PQH MR
Sbjct: 118 GNARALNFARAHAATLEAALDREGDRRFEYFGLRTVFDRYLMRHPKTRRVLETPQHFFMR 177
Query: 174 VSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYD 233
V+ + D D A+ Y L S+ + ++PTLFNAGT + QLSSCFLL D + IY+
Sbjct: 178 VAAALAVD-PDEAVALYGLFSRLDYLPSSPTLFNAGTHREQLSSCFLLDSPADHLVDIYE 236
Query: 234 TLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKR 293
A +SK +GGIGL+ H +R+ GS I TNG SNGIVP L+ + + V+QGG +R
Sbjct: 237 RYTDVAKLSKFSGGIGLAYHRVRSRGSLIGDTNGHSNGIVPWLKTLDASVAAVNQGG-RR 295
Query: 294 KGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCP 353
KGA +YLE WHAD+ EFL+LR N G E RA +L A W+PD FM RV D WSLF P
Sbjct: 296 KGACCVYLETWHADLPEFLELRDNTGNEYARAHNLNLANWIPDEFMRRVAADEGWSLFDP 355
Query: 354 SDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNR 413
D +G F Y + E G A + AR+L+ ++ + +TG +M FKD CN
Sbjct: 356 KTVRHFPDLYGEAFTRAYVEAERAGLAVATLPARELYARMMRTLAQTGNGWMCFKDRCNS 415
Query: 414 KSNQQNLG--TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVG 471
NQ T+ SNLCTEIVE +SPEETAVCNL SI L ++R P+ G
Sbjct: 416 TCNQTARPGRTVHLSNLCTEIVEVTSPEETAVCNLGSINLGHHLR----PID-------G 464
Query: 472 SRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTF 531
+ D+ +L + L+++ID+N YP+ET +SN R RP+G+G GL D
Sbjct: 465 GGTQADWEVDWAKLGRSVTLAVRALDRVIDLNFYPLETAAKSNARWRPVGLGTMGLHDLL 524
Query: 532 ILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN 591
+ LGL F+SP A++L + + E +Y+HAL+ S +LA + GP+ + + + G LQ D+W
Sbjct: 525 LRLGLDFDSPAARELARRVAEHVYFHALRTSCDLARQHGPHPAFPETRAADGQLQFDLWG 584
Query: 592 ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSG 651
+ P + W +LR ++ +G+RNSLLVA PTA+ + I G EC EP SN+ R LSG
Sbjct: 585 VEPGEDLPWDTLRRDVASHGLRNSLLVAVAPTATIASIAGCYECIEPAVSNLVKRETLSG 644
Query: 652 EFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLV 711
EFI VN++L+ +L LGLW A++ + +NGSV I+ +PE L+ ++T WE+ + L+
Sbjct: 645 EFIQVNRYLIDELRRLGLWDEAMRAALKRDNGSVQGIARVPEALRRRFRTAWELPMRALI 704
Query: 712 DMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
DMAA RG +IDQSQSLN+ +E PD +L++++FYAW G+KT YYLR+R A+ K TV
Sbjct: 705 DMAAARGPFIDQSQSLNLFVESPDLTRLSAMYFYAWKAGLKT-TYYLRSRPASGIAKATV 763
Query: 772 DTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
D + A EA + CSL+N E C AC
Sbjct: 764 DPA-----NAKPKQRSAEA----LACSLENPEACEAC 791
>gi|256391239|ref|YP_003112803.1| ribonucleoside-diphosphate reductase subunit alpha [Catenulispora
acidiphila DSM 44928]
gi|256357465|gb|ACU70962.1| ribonucleoside-diphosphate reductase, alpha subunit [Catenulispora
acidiphila DSM 44928]
Length = 841
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 310/780 (39%), Positives = 445/780 (57%), Gaps = 56/780 (7%)
Query: 39 VAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN----SF 94
V +K AG+ G Q+ +LA ++AA + P Y+ LA R+ + + SF
Sbjct: 107 VVRKTFAGLPPGAGADQVADLAVQSAAELIGEEPQYSKLAARLLSGVIAREAAGQGATSF 166
Query: 95 SETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERS 154
S ++ G + L+ D +I AA D AI D F+YFG +T+
Sbjct: 167 SASVA---------VGHREGLIGDVTEALITGAAARFDAAIDPAGDLRFEYFGLRTVYDR 217
Query: 155 YLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQ 212
YLL+ + RV+E PQH L+RV+ G+ +D + A+ Y LMS + ++PTLFN+GT
Sbjct: 218 YLLRHPVTRRVIETPQHFLLRVAAGLSQDPQE-AVGFYRLMSSLAYLPSSPTLFNSGTRH 276
Query: 213 PQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGI 272
Q+SSC+L+ D ++ IYD + A +SK AGGIG+ +R+ G+ I TNG SNGI
Sbjct: 277 TQMSSCYLVDSPLDELDSIYDRYHQVARLSKFAGGIGIGFSRVRSRGALIRSTNGRSNGI 336
Query: 273 VPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYAL 332
VP L+ + + V+QGG +RKGA +YLEPWH DI EFL LR N G++ R +L A
Sbjct: 337 VPFLRTLDSSVAAVNQGG-RRKGAACVYLEPWHPDIEEFLQLRDNTGEDARRTHNLNLAN 395
Query: 333 WVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFE 392
W+PD FM RV DG WSL P L D WG EF+ Y + E EGR +SAR+L+ +
Sbjct: 396 WIPDEFMRRVEADGVWSLMDPDQVPELPDLWGAEFDAAYRKAEAEGRYSRQVSARELYGK 455
Query: 393 ILNSQIETGTPYMLFKDSCNRKSNQQNL--GTIKSSNLCTEIVEFSSPEETAVCNLASIA 450
++ + +TG +M FKD+ N+ NQ + T+ SNLCTEI+E SS ETAVCNL SI
Sbjct: 456 MMRTLAQTGNGWMTFKDASNQLCNQTGVPGNTVHLSNLCTEIIEVSSDTETAVCNLGSIN 515
Query: 451 LPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETT 510
L + L +RD+ D++RL + L+++ID+N+YP E T
Sbjct: 516 L--------------AAHLTPARDA----VDWDRLRATVRTAVVFLDRVIDINYYPSEQT 557
Query: 511 RRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDG 570
SN R RP+G+G+ GL D F L LPF+ A++L+ I E IY AL+ SA LA + G
Sbjct: 558 AASNPRWRPVGLGLMGLQDVFFALRLPFDDERARELSTRISEEIYLTALETSAGLAEEFG 617
Query: 571 PYETYFGSPMSKGILQVDMWNI--TPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQ 628
+ + + +KG LQ D+WN+ +P W+++R ++ G+RNSLLVA PTA+ +
Sbjct: 618 AHPAFADTRAAKGDLQPDLWNVATSPELATRWNAVRGRVAATGLRNSLLVAIAPTATIAS 677
Query: 629 ILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKI 688
I G EC EP SN++ R LSGEF+ +N L+ +L LGLW+ A++ I GSV +
Sbjct: 678 IAGCYECIEPQVSNLFKRETLSGEFLQINSALVGELKALGLWTPAVREAIKRAEGSVQGV 737
Query: 689 SEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWS 748
+P E++A+Y+T WE+ Q+ L+D+AA RG +IDQSQSLN+ + P GKL+S++ YAW
Sbjct: 738 EALPAEVRALYRTAWELPQRALIDLAAARGPFIDQSQSLNLFLAAPTIGKLSSMYMYAWK 797
Query: 749 KGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
G+K+ YYLR+R A + TV + CSL+N E C AC
Sbjct: 798 AGLKS-TYYLRSRPATRIQQATVAVAAEEAVA----------------CSLENPESCEAC 840
>gi|182436092|ref|YP_001823811.1| ribonucleoside-diphosphate reductase large subunit [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178464608|dbj|BAG19128.1| putative ribonucleoside-diphosphate reductase large subunit
[Streptomyces griseus subsp. griseus NBRC 13350]
Length = 804
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 318/796 (39%), Positives = 451/796 (56%), Gaps = 61/796 (7%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN-- 92
DP VA G +L LA E AA + P Y+ LA R+ +
Sbjct: 47 DPGRVAAAALRGRNARSDEAELRSLATEAAAGLISEDPAYSRLAARLLTRTIADEAAGQG 106
Query: 93 --SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLD---GAIIYD-RDFDFDYF 146
SFS ++ G + L+AD + +A LD G + D D F YF
Sbjct: 107 ATSFSASVA---------VGHREGLIADRTAAFVALHATALDQLVGQALTDGADDRFGYF 157
Query: 147 GFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFTH 200
G +TL YLL+ + +V+E PQH ++RV+ G+ +D++ AL Y LMS+ +
Sbjct: 158 GLRTLHSRYLLRHPITRQVIETPQHFMLRVAAGLAEDESVRALDEVAALYGLMSKLDYLP 217
Query: 201 ATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGS 260
++PTLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IRA GS
Sbjct: 218 SSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 277
Query: 261 YIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGK 320
I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHADI EFL+LR N G+
Sbjct: 278 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 336
Query: 321 EECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRA 380
++ R +L A W+PD FM RV D +WSLF P+D L D WG F+ Y E +G A
Sbjct: 337 DQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPADVPELVDLWGDAFDAAYRAAEAKGLA 396
Query: 381 KMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSP 438
+ + AR+L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E +
Sbjct: 397 RKTMPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGRVVHSSNLCTEILEVTDD 456
Query: 439 EETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNK 498
ETAVCNL S+ L +V N D++RL + L++
Sbjct: 457 GETAVCNLGSVNLGAFV--------------------ANGSIDWDRLDSTVRTAVTFLDR 496
Query: 499 IIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHA 558
++D+N YP E SN R RP+G+G GL D F L LPF+SPEA+ L+ I E I A
Sbjct: 497 VVDINFYPTEQAGNSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTKISERIMLAA 556
Query: 559 LKASAELAVKDGPYETYFGSPMSKGILQVDMW--NITPSDRWDWSSLREMISKNGVRNSL 616
+AS +LA + GP + + ++G+L D + + DRWD +LR ++K G+RNSL
Sbjct: 557 YEASCDLAERSGPLPAWSKTRAARGVLHPDHYATELNWPDRWD--ALRARVAKTGMRNSL 614
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKT 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +LG+W +
Sbjct: 615 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLVDELKKLGVWDARTRE 674
Query: 677 KIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDH 736
+ +GSV + IPE+++A+Y+T WEI Q+ L+DMAA R ++DQSQSLN+ +E P
Sbjct: 675 ALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTI 734
Query: 737 GKLTSLHFYAWSKGMKTGMYYLRTRAAA----DAIKFTVDTSVLNNEKANRADNDVEANL 792
GKL+S++ YAW +G+KT YYLR+R A A + L ++A+ D D
Sbjct: 735 GKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQASAAAPLPVQQASAPDADA---- 789
Query: 793 AQVVCSLKNQEECMAC 808
+ CSL+N E C AC
Sbjct: 790 --IACSLENPESCEAC 803
>gi|386839867|ref|YP_006244925.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374100168|gb|AEY89052.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451793161|gb|AGF63210.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 698
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 301/729 (41%), Positives = 431/729 (59%), Gaps = 50/729 (6%)
Query: 92 NSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDG----AIIYDRDFDFDYFG 147
+SF+E+I G++ L+AD E + +A LD A+ D F YFG
Sbjct: 7 SSFTESIA---------LGRREGLIADGTAEFVRTHAERLDALVESAVAEGADDRFGYFG 57
Query: 148 FKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDT----DSALKTYHLMSQHWFTHA 201
+TL YLL+ + +V+E PQH L+RV+ G+ +DDT D Y LMS+ + +
Sbjct: 58 LRTLYSRYLLRHPVTRKVIETPQHFLLRVASGLAEDDTSRSVDEVAALYGLMSRLDYLPS 117
Query: 202 TPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSY 261
+PTLFN+GTP PQ+S+C+LL D ++ IYD + A +SK AGGIGLS IR+ GS
Sbjct: 118 SPTLFNSGTPHPQMSACYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSL 177
Query: 262 IHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKE 321
I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WH+DI EFL+LR N G++
Sbjct: 178 IRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGED 236
Query: 322 ECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAK 381
R +L A W+PD FM RV D +WSLF P+D L D WG +F+ Y + E G AK
Sbjct: 237 ARRTHNLNLAHWIPDEFMRRVNADEQWSLFSPADVPELVDLWGEDFDAAYRKAEAAGLAK 296
Query: 382 MVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPE 439
I+AR L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E ++
Sbjct: 297 KTIAARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGNVVHSSNLCTEILEVTNDG 356
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
ETAVCNL S+ L +V D+ + D+ERL + + L+++
Sbjct: 357 ETAVCNLGSVNLGAFV------------------DAASGDIDWERLDQTVRTAVTFLDRV 398
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
+D+N YP E RSN + RP+G+G GL D F L LPF+S EA+ L+ I E I A
Sbjct: 399 VDINFYPTEQAGRSNAKWRPVGLGAMGLQDVFFKLRLPFDSAEAKALSTRIAERIMLAAY 458
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVA 619
+ SA+LA ++GP + + ++G+L D +++ + W++LRE ++ G+RN+L++A
Sbjct: 459 ETSADLAERNGPLPAWDQTRAARGVLHPDHYDVQFTWPERWAALRERVAAVGMRNALMLA 518
Query: 620 PMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKII 679
PT++ + I G EC EP SN++ R LSGEF+ VN +L++DL LG+W + +
Sbjct: 519 IAPTSTIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVQDLKNLGVWDARTREALR 578
Query: 680 YENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKL 739
NGS+ IPEE +A+Y+T WEI Q+ L+DMAA R Y+DQ QSLN+ ME P GKL
Sbjct: 579 DSNGSIQDFPWIPEETRALYRTAWEIPQRGLIDMAAARTPYLDQGQSLNLFMETPTIGKL 638
Query: 740 TSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSL 799
+S++ YAW G+KT YYLR+R A I +V + A D + CSL
Sbjct: 639 SSMYAYAWKSGLKT-TYYLRSRPATR-IARAAQATVPAQQPAPDPD--------AIACSL 688
Query: 800 KNQEECMAC 808
+N E C AC
Sbjct: 689 ENPESCEAC 697
>gi|326776717|ref|ZP_08235982.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
griseus XylebKG-1]
gi|326657050|gb|EGE41896.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
griseus XylebKG-1]
Length = 804
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 318/796 (39%), Positives = 451/796 (56%), Gaps = 61/796 (7%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN-- 92
DP VA G +L LA E AA + P Y+ LA R+ +
Sbjct: 47 DPGRVAAAALRGRNARSDEAELRSLATEAAAGLISEDPAYSRLAARLLTRTIADEAAGQG 106
Query: 93 --SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLD---GAIIYD-RDFDFDYF 146
SFS ++ G + L+AD + +A LD G + D D F YF
Sbjct: 107 ATSFSASVA---------VGHREGLIADRTAAFVALHATALDQLVGQALTDGADDRFGYF 157
Query: 147 GFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFTH 200
G +TL YLL+ + +V+E PQH ++RV+ G+ +D++ AL Y LMS+ +
Sbjct: 158 GLRTLHSRYLLRHPITRQVIETPQHFMLRVAAGLAEDESVRALDEVAALYGLMSKLDYLP 217
Query: 201 ATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGS 260
++PTLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IRA GS
Sbjct: 218 SSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 277
Query: 261 YIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGK 320
I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHADI EFL+LR N G+
Sbjct: 278 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 336
Query: 321 EECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRA 380
++ R +L A W+PD FM RV D +WSLF P+D L D WG F+ Y E +G A
Sbjct: 337 DQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPADVPELVDLWGDAFDAAYRAAEAKGLA 396
Query: 381 KMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSP 438
+ + AR+L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E +
Sbjct: 397 RKTMPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGRVVHSSNLCTEILEVTDD 456
Query: 439 EETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNK 498
ETAVCNL S+ L +V N D++RL + L++
Sbjct: 457 GETAVCNLGSVNLGAFV--------------------ANGSIDWDRLDATVRTAVTFLDR 496
Query: 499 IIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHA 558
++D+N YP E SN R RP+G+G GL D F L LPF+SPEA+ L+ I E I A
Sbjct: 497 VVDINFYPTEQAGNSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTKISERIMLAA 556
Query: 559 LKASAELAVKDGPYETYFGSPMSKGILQVDMW--NITPSDRWDWSSLREMISKNGVRNSL 616
+AS +LA + GP + + ++G+L D + + DRWD +LR ++K G+RNSL
Sbjct: 557 YEASCDLAERSGPLPAWSRTRAARGVLHPDHYATELNWPDRWD--ALRARVAKTGMRNSL 614
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKT 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +LG+W +
Sbjct: 615 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLVDELKKLGVWDARTRE 674
Query: 677 KIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDH 736
+ +GSV + IPE+++A+Y+T WEI Q+ L+DMAA R ++DQSQSLN+ +E P
Sbjct: 675 ALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTI 734
Query: 737 GKLTSLHFYAWSKGMKTGMYYLRTRAAA----DAIKFTVDTSVLNNEKANRADNDVEANL 792
GKL+S++ YAW +G+KT YYLR+R A A + L ++A+ D D
Sbjct: 735 GKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQASAAAPLPVQQASAPDADA---- 789
Query: 793 AQVVCSLKNQEECMAC 808
+ CSL+N E C AC
Sbjct: 790 --IACSLENPESCEAC 803
>gi|345009209|ref|YP_004811563.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
violaceusniger Tu 4113]
gi|344035558|gb|AEM81283.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
violaceusniger Tu 4113]
Length = 804
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 327/814 (40%), Positives = 464/814 (57%), Gaps = 58/814 (7%)
Query: 19 TARLKKLSYGLSKE--HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYAL 76
TA L+ L+ GL+ + DP VA G + G +L LA E AA + P+Y+
Sbjct: 24 TALLRTLT-GLTADLPATDPGKVAAAALRGRHPGSDEAELRGLAIEAAAGLIAEEPEYSR 82
Query: 77 LAGRVAVSNLHKITKN----SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLD 132
LA R+ + + SFS +++ G + L+AD E +AA LD
Sbjct: 83 LAARLLALTITEEAAGQGAVSFSTSVQ---------VGHREGLLADSTAEFAAAHAARLD 133
Query: 133 G----AIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSA 186
A+ D F YFG +TL YLL+ + +V+E PQH L+RV+ G+ +D ++ A
Sbjct: 134 ALVERALADGADKRFGYFGLRTLYSRYLLRHPITRQVIETPQHFLLRVACGLAEDLSERA 193
Query: 187 L----KTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIIS 242
L + Y L S + ++PTLFN+GT PQ+SSC+LL D ++ IY+ + A +S
Sbjct: 194 LDDVAELYRLTSTLSYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYNRYHQVARLS 253
Query: 243 KSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLE 302
K AGGIGLS IRA GS I GTNG SNGIVP L+ + + V+QGG +RKGA +YLE
Sbjct: 254 KHAGGIGLSYSRIRARGSLIRGTNGHSNGIVPFLRTLDASVAAVNQGG-RRKGAACVYLE 312
Query: 303 PWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADS 362
WHAD+ EFL+LR N G+E R +L A W+PD FM RV D WSLF P DA L D
Sbjct: 313 TWHADLEEFLELRDNTGEEARRTHNLNIAHWIPDEFMRRVEADADWSLFSPVDAPALVDL 372
Query: 363 WGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNL 420
WG EF+ Y + E EGRA + AR+L+ ++ + +TG +M FKD+ NR +NQ +
Sbjct: 373 WGDEFDAAYRKAEAEGRAVKQVPARQLYARMMRTLAQTGNGWMTFKDAANRTANQTAEPG 432
Query: 421 GTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLF 480
+ SSNLCTEI+E ++ ETAVCNL S+ L ++ E G
Sbjct: 433 RVVHSSNLCTEILEVTNDGETAVCNLGSVNLAAHLDEDGQ-------------------V 473
Query: 481 DFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFES 540
D+ERL L++++D+N YP + SN R RP+G+G+ GL D F L LPF+S
Sbjct: 474 DWERLDATVHTAVTFLDRVVDINFYPTDEAGASNSRWRPVGLGLMGLQDVFFRLRLPFDS 533
Query: 541 PEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN---ITPSDR 597
PEA+ L+ I E I A +AS ELA + GP+ + + ++G+L D + T +R
Sbjct: 534 PEAKALSTRISERIMLAAYEASCELAERHGPHPAWSETRTARGVLHPDHYTDAVATWPER 593
Query: 598 WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 657
W+ +LR ++K+G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN
Sbjct: 594 WE--ALRTRMAKSGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVN 651
Query: 658 KHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADR 717
+L+ DL +LG+W + + NGSV + S +P +++ +Y+T WEI Q+ L++MAA R
Sbjct: 652 SYLVDDLKKLGVWDAHTREALRESNGSVQEFSWVPADVRDLYRTAWEIPQRALIEMAAAR 711
Query: 718 GCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
Y+DQSQSLN+ M P GKL+S++ YAW +G+KT YYLR+R A I +
Sbjct: 712 TPYLDQSQSLNLFMASPTIGKLSSMYAYAWKRGIKT-TYYLRSRPATR-IAQSARGGGAA 769
Query: 778 NEKANRADNDVEANLAQ---VVCSLKNQEECMAC 808
A V+ A+ + CSL+N E C AC
Sbjct: 770 ATAPAPALIPVQQAPAEADAIACSLENPESCEAC 803
>gi|302536806|ref|ZP_07289148.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. C]
gi|302445701|gb|EFL17517.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. C]
Length = 798
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 321/792 (40%), Positives = 453/792 (57%), Gaps = 52/792 (6%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRV---AVSN-LHKIT 90
DP VA G +L LA E AA + P Y+ LA R+ AV++
Sbjct: 40 DPGRVAAAALRGRSASADEAELRGLATEAAAGLISEDPAYSRLAARLLTLAVADEAAGQG 99
Query: 91 KNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDG----AIIYDRDFDFDYF 146
SF+E++ G + L+AD E + +AA LD A+ D F +F
Sbjct: 100 ATSFAESVA---------VGHREGLIADRTAEFVAAHAARLDALVEHALAEGADDRFGFF 150
Query: 147 GFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFTH 200
G +TL YLL+ + +V+E PQ+ ++RV+ G+ +DD+ A++ Y LMS+ +
Sbjct: 151 GLRTLHSRYLLRHPITRQVIETPQYFMLRVACGLAEDDSVQAVEEVASLYRLMSRLDYLP 210
Query: 201 ATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGS 260
++PTLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IRA GS
Sbjct: 211 SSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 270
Query: 261 YIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGK 320
I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHADI EFL+LR N G+
Sbjct: 271 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 329
Query: 321 EECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRA 380
++ R +L A W+PD FM RV D WSLF P+D L D +G EF+ Y + E G A
Sbjct: 330 DQRRTHNLNLAHWIPDEFMRRVNADADWSLFSPADVPELVDLYGDEFDAAYVKAEAAGLA 389
Query: 381 KMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL-GTI-KSSNLCTEIVEFSSP 438
K + AR L+ ++ + +TG +M FKD+ NR +NQ L GT+ SSNLCTEI+E ++
Sbjct: 390 KKTMPARDLYGRMMRTLAQTGQGWMTFKDASNRTANQTALPGTVVHSSNLCTEIIEVTND 449
Query: 439 EETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNK 498
ETAVCNL S+ L +V + + D+ RL E + L++
Sbjct: 450 GETAVCNLGSVNLGAFVADGEM--------------------DWARLDETVRTAVTFLDR 489
Query: 499 IIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHA 558
++D+N YP E RSN + RP+G+G GL D F L LPF+S EA+ L+ I E I A
Sbjct: 490 VVDINFYPTEQAGRSNAKWRPVGLGAMGLQDVFFKLRLPFDSAEAKALSTKISERIMLAA 549
Query: 559 LKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP--SDRWDWSSLREMISKNGVRNSL 616
+AS +LA + GP + + ++G+L D + +RWD +LR I+K G+RNSL
Sbjct: 550 YEASCDLAERSGPLPAWAETRTAQGVLHPDHYETERHWPERWD--ALRARIAKTGMRNSL 607
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKT 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L++DL +LG+W +
Sbjct: 608 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNGYLVEDLKQLGVWDAQTRE 667
Query: 677 KIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDH 736
+ +GSV IP E++ +Y+T WEI Q+ L+DMAA R Y+DQSQSLN+ +E P
Sbjct: 668 ALRESSGSVQGFGWIPAEIRELYRTAWEIPQRGLIDMAAARTPYLDQSQSLNLFLETPTI 727
Query: 737 GKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVV 796
GKL+S++ YAW +G+KT YYLR+R A I + A A + +
Sbjct: 728 GKLSSMYAYAWKQGLKT-TYYLRSRPATK-IARAASGAAAVPAAATPAQLPQALDAEALA 785
Query: 797 CSLKNQEECMAC 808
CSL+N E C AC
Sbjct: 786 CSLENPESCEAC 797
>gi|357401661|ref|YP_004913586.1| Ribonucleoside-diphosphate reductase large subunit [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|386357724|ref|YP_006055970.1| ribonucleoside-diphosphate reductase large subunit [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|337768070|emb|CCB76783.1| Ribonucleoside-diphosphate reductase large subunit [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|365808232|gb|AEW96448.1| putative ribonucleoside-diphosphate reductase large subunit
[Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 788
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 310/782 (39%), Positives = 445/782 (56%), Gaps = 40/782 (5%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSF 94
DP VA G + G +L +LA E AA + P Y+ LA R+ IT+ +
Sbjct: 38 DPGRVAAAALRGRHAGSDAAELRDLATEAAAGLISEDPQYSFLAARLLA---RAITEEAA 94
Query: 95 SETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERS 154
+ + + + +G + L+AD +A LD I D F YFG +TL
Sbjct: 95 GQQVTSFSS--SIATGHREGLIADATAAFTAAHAGRLDALIDPAGDDRFGYFGLRTLYSR 152
Query: 155 YLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFTHATPTLFNA 208
YLL+ + +VVE PQH L+RV+ G+ DD+ +A++ Y LMS+ + ++PTLFN+
Sbjct: 153 YLLRHPVTRQVVETPQHFLLRVACGLAADDSAAAVEEVASLYRLMSRLDYLPSSPTLFNS 212
Query: 209 GTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGS 268
GT PQ+SSC+LL D ++ IY + A +SK AGGIGL IR+ GS I GTNG
Sbjct: 213 GTRHPQMSSCYLLDSPLDELDSIYQRYHQVARLSKHAGGIGLPFSRIRSRGSLIRGTNGR 272
Query: 269 SNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDL 328
SNGIVP L+ + + V+QGG +RKGA +YLE WHAD+ EFL+LR N G++ R +L
Sbjct: 273 SNGIVPFLRTLDASVAAVNQGG-RRKGAACVYLETWHADVEEFLELRDNTGEDARRTHNL 331
Query: 329 FYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARK 388
A W+PD FM RV D +WSLF P+D L D WG EF+ Y E GR + AR+
Sbjct: 332 NLAHWIPDEFMRRVEADAEWSLFSPADVPELVDLWGEEFDAAYRAAEAAGRQIKRVPARQ 391
Query: 389 LWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNL 446
L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E + ETAVCNL
Sbjct: 392 LYARMMRTLAQTGNGWMTFKDAANRTANQTAEPGSVVHSSNLCTEILEVTDDGETAVCNL 451
Query: 447 ASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYP 506
S+ L ++ + + D+E+L + L++++D+N+YP
Sbjct: 452 GSVNLAAHL-------------------TADASVDWEKLDATVRTAVTFLDRVVDINYYP 492
Query: 507 IETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELA 566
E SN R RP+G+G+ GL D F L LPF+SPEA+ L+ I E + A + S LA
Sbjct: 493 TEQAAASNSRWRPVGLGVMGLQDVFFRLRLPFDSPEARALSTRIAERVMLAAYEQSCALA 552
Query: 567 VKDGPYETYFGSPMSKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTAST 626
+ GP+ + + ++G+L D + P+ W++LRE IS+ G+RNSLL+A PTA+
Sbjct: 553 ERHGPHPAWERTRAARGVLHPDHFPTEPAWPDRWTALRERISRTGLRNSLLLAIAPTATI 612
Query: 627 SQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVS 686
+ I G EC EP SN++ R LSGEF+ VN +L+ DL +LG+W + + NGSV
Sbjct: 613 ASIAGVYECIEPQVSNLFKRETLSGEFLQVNTYLVADLKKLGVWDARTREALREANGSVQ 672
Query: 687 KISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYA 746
+ IP ++A+Y+T WE+ Q+ L+DMAADR Y+DQSQSLN+ M P GKL+S++ YA
Sbjct: 673 DLGWIPAGVRALYRTAWELPQRALIDMAADRTPYLDQSQSLNLFMAAPTIGKLSSMYAYA 732
Query: 747 WSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECM 806
W KG+KT YYLR+R A + + D + + CSL+N E C
Sbjct: 733 WKKGLKT-TYYLRSRPATRIARAAGAATATAAVPQQAPDAEA------IACSLENPESCE 785
Query: 807 AC 808
AC
Sbjct: 786 AC 787
>gi|411004497|ref|ZP_11380826.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
globisporus C-1027]
Length = 807
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 315/796 (39%), Positives = 452/796 (56%), Gaps = 61/796 (7%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN-- 92
DP VA G +L LA E AA + P Y+ LA R+ ++
Sbjct: 50 DPGRVAAAALRGRNARSDEAELRMLATEAAAGLISEDPAYSRLAARLLTLSIADEAAGQG 109
Query: 93 --SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDG----AIIYDRDFDFDYF 146
SFS ++ G + L+AD + +A LD + D F YF
Sbjct: 110 ATSFSASVT---------VGHREGLIADRTAAFVELHAKALDELVERTLAEGADDRFGYF 160
Query: 147 GFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFTH 200
G +TL YLL+ + +V+E PQH ++RV+ G+ +D++ AL Y LMS+ +
Sbjct: 161 GLRTLHSRYLLRHPITRQVIETPQHFMLRVAAGLAEDESARALDEVAALYGLMSKLDYLP 220
Query: 201 ATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGS 260
++PTLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IRA GS
Sbjct: 221 SSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 280
Query: 261 YIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGK 320
I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHADI EFL+LR N G+
Sbjct: 281 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 339
Query: 321 EECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRA 380
++ R +L A W+PD FM RV D +WSLF P+D L D WG EF+ Y E +G A
Sbjct: 340 DQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPADVPELVDLWGDEFDAAYRAAEAKGLA 399
Query: 381 KMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSP 438
+ + AR+L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E ++
Sbjct: 400 RKTMPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGRVVHSSNLCTEILEVTND 459
Query: 439 EETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNK 498
ETAVCNL S+ L +V N D++RL + L++
Sbjct: 460 GETAVCNLGSVNLGAFV--------------------ANGSIDWDRLDSTVRTAVTFLDR 499
Query: 499 IIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHA 558
++D+N YP E SN R RP+G+G GL D F L LPF+SPEA+ L+ I E I A
Sbjct: 500 VVDINFYPTEQAGNSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTKISERIMLAA 559
Query: 559 LKASAELAVKDGPYETYFGSPMSKGILQVDMW--NITPSDRWDWSSLREMISKNGVRNSL 616
+AS +LA + GP + + ++G+L D + + +RWD +LR ++K G+RNSL
Sbjct: 560 YEASCDLAERSGPLPAWSETRAARGVLHPDHYATELNWPERWD--ALRARVAKTGMRNSL 617
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKT 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +LG+W +
Sbjct: 618 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLVDELKKLGVWDARTRE 677
Query: 677 KIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDH 736
+ +GSV + IPE+++A+Y+T WEI Q+ L+DMAA R ++DQSQSLN+ +E P
Sbjct: 678 ALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTI 737
Query: 737 GKLTSLHFYAWSKGMKTGMYYLRTRAAA----DAIKFTVDTSVLNNEKANRADNDVEANL 792
GKL+S++ YAW +G+KT YYLR+R A A + + ++A+ D D
Sbjct: 738 GKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQASAAAPIPVQQASAPDADA---- 792
Query: 793 AQVVCSLKNQEECMAC 808
+ CSL+N E C AC
Sbjct: 793 --IACSLENPESCEAC 806
>gi|345001979|ref|YP_004804833.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
sp. SirexAA-E]
gi|344317605|gb|AEN12293.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SirexAA-E]
Length = 803
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 315/793 (39%), Positives = 447/793 (56%), Gaps = 56/793 (7%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN-- 92
DP VA G +L LA E AA + P Y+ LA R+ +
Sbjct: 47 DPGRVAAAALRGRNARSDEAELRSLATEAAAGLISEDPAYSRLAARLLTLTIADEAAGQG 106
Query: 93 --SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAI---IYD-RDFDFDYF 146
SFS ++ G + L+AD + ++A LD + + D D F YF
Sbjct: 107 ATSFSASVA---------VGHREGLIADRTAAFVEQHAQVLDALVERTLADGADDRFGYF 157
Query: 147 GFKTLERSYLLKM--DSRVVERPQHMLMRVSVGIHKDDT----DSALKTYHLMSQHWFTH 200
G +TL YLL+ +V+E PQH ++RV+ G+ +D++ D Y LMS+ +
Sbjct: 158 GLRTLHSRYLLRHPHTRQVIETPQHFMLRVAAGLAEDESVRARDEVAALYGLMSRLDYLP 217
Query: 201 ATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGS 260
++PTLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IRA GS
Sbjct: 218 SSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 277
Query: 261 YIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGK 320
I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHADI EFL+LR N G+
Sbjct: 278 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 336
Query: 321 EECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRA 380
++ R +L A W+PD FM RV D +WSLF P+D L D WG F+ Y E G A
Sbjct: 337 DQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPADVPELTDLWGDAFDAAYRAAEARGLA 396
Query: 381 KMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSP 438
+ + AR+L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E +
Sbjct: 397 RKTMPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGRVVHSSNLCTEILEVTDD 456
Query: 439 EETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNK 498
ETAVCNL S+ L +V + D+ERL + L++
Sbjct: 457 GETAVCNLGSVNLGAFVSGGSI--------------------DWERLDATVRTAVTFLDR 496
Query: 499 IIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHA 558
++D+N YP E SN R RP+G+G GL D F L LPF+SPEA+ L+ I E I A
Sbjct: 497 VVDINFYPTEQAGTSNARWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTRISERIMLAA 556
Query: 559 LKASAELAVKDGPYETYFGSPMSKGILQVDMW--NITPSDRWDWSSLREMISKNGVRNSL 616
+AS +LA + GP + + ++G+L D + + +RWD +LR I+K G+RNSL
Sbjct: 557 YEASCDLAERSGPLPAWSETRAARGVLHPDHYATELNWPERWD--ALRARIAKTGMRNSL 614
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKT 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+++L +LG+W +
Sbjct: 615 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNGYLVEELKKLGVWDARTRE 674
Query: 677 KIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDH 736
+ +GSV IPE+++A+Y+T WEI Q+ L+DMAA R ++DQSQSLN+ +E P
Sbjct: 675 ALREASGSVQGFGWIPEDVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTI 734
Query: 737 GKLTSLHFYAWSKGMKTGMYYLRTRAAAD-AIKFTVDTSVLNNEKANRADNDVEANLAQV 795
GKL+S++ YAW +G+KT YYLR+R A A + T+ D +A +
Sbjct: 735 GKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGRTASAALPAQQAQAPDADA----I 789
Query: 796 VCSLKNQEECMAC 808
CSL+N E C AC
Sbjct: 790 ACSLENPESCEAC 802
>gi|239990629|ref|ZP_04711293.1| putative ribonucleoside-diphosphate reductase large subunit
[Streptomyces roseosporus NRRL 11379]
gi|291447644|ref|ZP_06587034.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
roseosporus NRRL 15998]
gi|291350591|gb|EFE77495.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
roseosporus NRRL 15998]
Length = 807
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 314/796 (39%), Positives = 452/796 (56%), Gaps = 61/796 (7%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITK--- 91
DP VA G +L LA E AA + P Y+ LA R+ ++
Sbjct: 50 DPGRVAAAALRGRNARSDEAELRSLATEAAAGLISEDPAYSRLAARLLTLSIADEAAGQG 109
Query: 92 -NSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDG----AIIYDRDFDFDYF 146
SFS ++ G + L+AD + +A LD + D F YF
Sbjct: 110 ATSFSASVA---------VGHREGLIADRTAAFVELHAKALDELVERTLAEGADDRFGYF 160
Query: 147 GFKTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFTH 200
G +TL YLL+ + +V+E PQH ++RV+ G+ +D++ AL Y LMS+ +
Sbjct: 161 GLRTLHSRYLLRHPITRQVIETPQHFMLRVAAGLAEDESVRALDEVAALYGLMSKLDYLP 220
Query: 201 ATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGS 260
++PTLFN+GT PQ+SSC+LL D ++ IYD + A +SK AGGIGLS IRA GS
Sbjct: 221 SSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 280
Query: 261 YIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGK 320
I GTNG SNGIVP L+ + + V+QGG +RKGA A+YLE WHADI EFL+LR N G+
Sbjct: 281 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 339
Query: 321 EECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRA 380
++ R +L A W+PD FM RV D +WSLF P+D L D WG F+ Y E +G A
Sbjct: 340 DQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPADVPELVDLWGDAFDAAYRAAEAKGLA 399
Query: 381 KMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSP 438
+ + AR+L+ ++ + +TG +M FKD+ NR +NQ + + SSNLCTEI+E ++
Sbjct: 400 RKTMPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGRVVHSSNLCTEILEVTND 459
Query: 439 EETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNK 498
ETAVCNL S+ L +V N D++RL + L++
Sbjct: 460 GETAVCNLGSVNLGAFV--------------------ANGSIDWDRLDSTVRTAVTFLDR 499
Query: 499 IIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHA 558
++D+N YP E SN R RP+G+G GL D F L LPF+SPEA+ L+ I E I A
Sbjct: 500 VVDINFYPTEQAGNSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTKISERIMLAA 559
Query: 559 LKASAELAVKDGPYETYFGSPMSKGILQVDMWN--ITPSDRWDWSSLREMISKNGVRNSL 616
+AS +LA + GP + + ++G+L D ++ + +RWD +LR ++K G+RNSL
Sbjct: 560 YEASCDLAERSGPLPAWSETRAARGVLHPDHYDTELNWPERWD--ALRARVAKTGMRNSL 617
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKT 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +LG+W +
Sbjct: 618 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLVDELKKLGVWDARTRE 677
Query: 677 KIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDH 736
+ +GSV + IPE+++A+Y+T WEI Q+ L+DMAA R ++DQSQSLN+ +E P
Sbjct: 678 ALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTI 737
Query: 737 GKLTSLHFYAWSKGMKTGMYYLRTRAAA----DAIKFTVDTSVLNNEKANRADNDVEANL 792
GKL+S++ YAW +G+KT YYLR+R A A + + ++A+ D D
Sbjct: 738 GKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQASAAAPIPVQQASAPDADA---- 792
Query: 793 AQVVCSLKNQEECMAC 808
+ CSL+N E C AC
Sbjct: 793 --IACSLENPESCEAC 806
>gi|154269831|ref|XP_001535822.1| hypothetical protein HCAG_09248 [Ajellomyces capsulatus NAm1]
gi|150409470|gb|EDN04916.1| hypothetical protein HCAG_09248 [Ajellomyces capsulatus NAm1]
Length = 524
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 260/444 (58%), Positives = 326/444 (73%), Gaps = 35/444 (7%)
Query: 341 RVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIET 400
RV +G+W+LFCP++A GLAD +G EFE LY +YE+EGR K + A+KLW+ IL +Q ET
Sbjct: 1 RVEKNGEWTLFCPNEAPGLADVYGDEFEALYEKYEKEGRGKKTVKAQKLWYAILEAQTET 60
Query: 401 GTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGV 460
G P+ML+KDSCNRKSNQ+NLGTI+SSNLCTEI+E+ SP+E AVCNLASIALP +V
Sbjct: 61 GNPFMLYKDSCNRKSNQKNLGTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVD---- 116
Query: 461 PVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPI 520
P++ +DF +L EVT+++ NLNKIID N+YP+E +RSN RHRPI
Sbjct: 117 PIRGE--------------YDFGKLHEVTQVVVRNLNKIIDRNYYPVEEAKRSNFRHRPI 162
Query: 521 GIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPM 580
G+QGLAD F+ L LPF+SPEA+QLN IFETIY+ L AS ELA DGPY TY GSP+
Sbjct: 163 ACGVQGLADAFLALRLPFDSPEAKQLNIQIFETIYHAGLTASCELAKVDGPYSTYEGSPV 222
Query: 581 SKGILQVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
S+GILQ DMWN+TP+D WDW SL++ I+K+G ILG NECFEPYT
Sbjct: 223 SQGILQYDMWNVTPTDLWDWDSLKQDIAKHG-----------------ILGFNECFEPYT 265
Query: 641 SNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYK 700
SNIY+RRVL+GEF +VN LLKDL ++GLWS +K +II E GS+ I IP+++KA+YK
Sbjct: 266 SNIYSRRVLAGEFQIVNPWLLKDLVDMGLWSDNMKNRIIAEGGSIQNIPNIPQDIKALYK 325
Query: 701 TVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRT 760
TVWEI Q+T+V MAADRG +IDQSQSLNIH+++P GK+TS+HF W G+KTGMYYLRT
Sbjct: 326 TVWEISQRTIVQMAADRGAFIDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRT 385
Query: 761 RAAADAIKFTVDTSVLNNEKANRA 784
AA+ I+FTVD L N A
Sbjct: 386 MAASAPIQFTVDQEQLKVADTNVA 409
>gi|384082548|ref|ZP_09993723.1| ribonucleotide-diphosphate reductase subunit alpha [gamma
proteobacterium HIMB30]
Length = 957
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 317/836 (37%), Positives = 477/836 (57%), Gaps = 59/836 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
++K DG KEP+ ++ + + GL+ + VL Q+ +Y GVT +
Sbjct: 150 IVKEDGSKEPLDVGRLKTVIAEACDGLTDVDGETVL--QETLKNLYDGVTQHDVSTALIM 207
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHK--ITKNSFSE--TIKDMYNYYNK------RSGKK 112
+A M P+Y + R+ + ++ +T+ + +E T +M + Y +
Sbjct: 208 SARTMVEKEPNYTYVTARLLLDDIRAKALTRLNVAEKATQFEMESLYPMALKAFLELAVE 267
Query: 113 ASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLM 172
+ LV+ D+ E + A GA+I +RD F Y G +TL Y + D +E PQ M
Sbjct: 268 SELVSKDLLEYDLDRMA---GALIAERDNQFTYLGLQTLYDRYFIHKDDVRIELPQVFFM 324
Query: 173 RVSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
R+++G+ ++ + A++ Y L+S + +TPTLFN+GT + QLSSC+L + D+ ++
Sbjct: 325 RIAMGLALREENREERAIEFYQLLSSFDYMASTPTLFNSGTLRSQLSSCYLTTVPDN-LD 383
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
GIY ++ A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QG
Sbjct: 384 GIYGAIRDNAMLSKWAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQG 443
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G KRKGA YLE WH DI EFL+LRKN G + R D+ A WVPDLFM+RV +D +W+
Sbjct: 444 G-KRKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNSANWVPDLFMKRVFEDAEWT 502
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYE---EEGRAKMV--ISARKLWFEILNSQIETGTPY 404
LF PS L D +G+ FE+ Y +YE + G K + A+ LW ++L+ ETG P+
Sbjct: 503 LFSPSTCPDLHDLFGLAFENRYKEYEAMTQTGEIKHFKRVQAKDLWRKMLSMLFETGHPW 562
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD+CN +S QQ+ G + SSNLCTEI +S +E AVCNL S+ L ++V + G
Sbjct: 563 ITFKDACNLRSPQQHAGVVHSSNLCTEITLNTSVDEIAVCNLGSVNLRQHVTKDGG---- 618
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
D E+LA+ K L+ +ID+N+Y + SN++HRP+G+GI
Sbjct: 619 ---------------LDREKLAKTVKTAVRMLDNVIDINYYAVPQAENSNMKHRPVGLGI 663
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D LG+P+ S EA Q + E I Y+A+ ASA+LA + G Y ++ GS S+G+
Sbjct: 664 MGFQDALYELGIPYGSDEAVQFADESMEVISYYAIDASADLARERGAYSSFDGSLWSQGV 723
Query: 585 LQVD------------MWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D N+ S + DW+ LRE +K+G+RNS ++A PTA+ + I G
Sbjct: 724 LPIDSIEKLREERGANYLNVDTSAQLDWTELREK-AKDGMRNSNVMAIAPTATIANITGV 782
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF VVN +L++DL E GLW + + + Y +GSV +++ IP
Sbjct: 783 SQSIEPTYQNLYVKSNLSGEFTVVNPYLVRDLKERGLWDNVMVNDLKYYDGSVQQVARIP 842
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
++LKA+Y T +E++ + +V+ AA R +IDQ+QSLNI++ + KL + AW G+K
Sbjct: 843 DDLKALYATSFELETRWIVEAAARRQKWIDQAQSLNIYIANANGKKLDVTYRMAWFSGLK 902
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
T YYLR A A K T++ S LN A +A E CSL + +C AC
Sbjct: 903 T-TYYLRALGATQAEKSTINKSNLNAVSATQATQAAEPAAVPKACSL-DDPDCEAC 956
>gi|357391821|ref|YP_004906662.1| putative ribonucleoside-diphosphate reductase subunit alpha
[Kitasatospora setae KM-6054]
gi|311898298|dbj|BAJ30706.1| putative ribonucleoside-diphosphate reductase subunit alpha
[Kitasatospora setae KM-6054]
Length = 804
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 307/791 (38%), Positives = 448/791 (56%), Gaps = 40/791 (5%)
Query: 33 HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN 92
DP VA G + G +L LA E AA+M P Y+ LA R+ +
Sbjct: 38 QVDPGHVAAAALRGRHAGSDFAELRGLAVEAAASMIAEDPQYSKLAARLLALEIRDEAAT 97
Query: 93 ----SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGF 148
SFS ++ G L+ D + +A D + D F+YFG
Sbjct: 98 QQVTSFSSSVA---------VGHAEGLIGDATAAFVAAHADLFDSLVDEAGDDRFEYFGL 148
Query: 149 KTLERSYLLK--MDSRVVERPQHMLMRVSVGIHKDDTDSALKT----YHLMSQHWFTHAT 202
+T++ YLL+ + +VVE PQH L+RV+ G+ ++ +++ Y LMS+ + ++
Sbjct: 149 RTVQSRYLLRHPITRKVVETPQHFLLRVAAGLAVGTSEESVREVAELYTLMSRLEYLTSS 208
Query: 203 PTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYI 262
PTLFN+GT PQ+SSC+LL D+++ IY+ + A +SK AGGIGLS IR+ GS I
Sbjct: 209 PTLFNSGTRHPQMSSCYLLDSPLDNLDSIYNRYAQIARLSKHAGGIGLSYSRIRSRGSLI 268
Query: 263 HGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEE 322
GTNG SNGIVP L+ + + V+QGG +RKGA +YLE WHADI EFL+LR N G+E
Sbjct: 269 RGTNGQSNGIVPFLRTLDSSVAAVNQGG-RRKGAACVYLETWHADIEEFLELRDNTGEEA 327
Query: 323 CRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKM 382
R +L A W+PD FM RV + WSLF P+D L D WG +F+ Y + E G+A
Sbjct: 328 RRTHNLNLAHWIPDEFMRRVNANADWSLFSPADVPELVDLWGADFDEAYVKAELAGKAVR 387
Query: 383 VISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG--TIKSSNLCTEIVEFSSPEE 440
I A+ L+ ++ + +TG +M FKD+ NR +NQ L T+ SSNLCTEI+E + E
Sbjct: 388 TIPAQTLYARMMRTLAQTGNGWMTFKDASNRAANQTALPGRTVHSSNLCTEILEVTDDSE 447
Query: 441 TAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKII 500
TAVCNL S+ L +V + + L+ + D++RL + L+++I
Sbjct: 448 TAVCNLGSVNLGAHVAPG-----ATAADLLNA-------MDWDRLDATVRTAVTFLDRVI 495
Query: 501 DVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALK 560
D+N YP SN R RP+G+G+ GL D F L + F+S EA L+ I E I A +
Sbjct: 496 DINFYPTTEAGTSNSRWRPVGLGVMGLQDVFFQLRIDFDSAEAVALSTLIAERIMLTAYE 555
Query: 561 ASAELAVKDGPYETYFGSPMSKGILQVDMW---NITPSDRWDWSSLREMISKNGVRNSLL 617
SA+LA + G +E Y + ++G L VD + N ++RWD +LR I++ G+RNSLL
Sbjct: 556 RSADLAERFGRHEAYGETRAARGQLHVDHFGAANPQWTERWD--ALRARIAEVGLRNSLL 613
Query: 618 VAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTK 677
+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+++L ELG+W +
Sbjct: 614 LAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNPYLVRELKELGVWDQQTRDA 673
Query: 678 IIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHG 737
+ NGS+ + + +P+E++++Y+T WE+ Q+ L+D+AA R YIDQSQSLN+ M P G
Sbjct: 674 LRDANGSIQEFNWLPQEVRSLYRTAWELPQRALIDLAAARQPYIDQSQSLNLFMAAPTIG 733
Query: 738 KLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVC 797
KL+S++ YAW G+KT YYLR+R A + + + +A + C
Sbjct: 734 KLSSMYSYAWKVGLKT-TYYLRSRPATRIAQAAPGAARTAAPVPVQTPTLSQAEQDAIAC 792
Query: 798 SLKNQEECMAC 808
SL+N E C AC
Sbjct: 793 SLENPESCEAC 803
>gi|149927166|ref|ZP_01915423.1| ribonucleotide-diphosphate reductase alpha subunit [Limnobacter sp.
MED105]
gi|149824105|gb|EDM83326.1| ribonucleotide-diphosphate reductase alpha subunit [Limnobacter sp.
MED105]
Length = 969
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 317/842 (37%), Positives = 469/842 (55%), Gaps = 67/842 (7%)
Query: 10 KEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTV 69
K P+ + + A ++ + GL++ D + ++ +Y GV ++ + A + AM
Sbjct: 151 KRPLDVEALKALIESAAVGLNE--IDVAHLQKETLKNLYDGVKIDEVFKSAILASRAMIE 208
Query: 70 NHPDYALLAGRVAVSNLHK------ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEI 123
N P Y L+ R+ + + + I ++ ++ + + + K+ G A L+ + + +
Sbjct: 209 NEPSYTLVTSRLLLHTIRREIIGREIAQDEMAQVYPEYFPQFIKK-GIAAGLLDNRLAQF 267
Query: 124 IMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDT 183
MK L A+ Y+RD FDY G +TL Y L ++ +E PQ MRV++G+ ++
Sbjct: 268 DMKK---LGAALKYERDLQFDYLGLQTLYDRYFLHVEGTRIEMPQAFYMRVAMGLALNEV 324
Query: 184 DS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D A++ Y ++S F +TPTLFN+GT + QLSSC+L + DD ++ IY+ +K+ A+
Sbjct: 325 DREARAIEFYEVLSTFDFMSSTPTLFNSGTIRSQLSSCYLTTIGDD-LDDIYEGIKENAL 383
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
+SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKGA Y
Sbjct: 384 LSKFAGGLGNDWTPVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAY 442
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + G W+LF PSD L
Sbjct: 443 LETWHMDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGNWTLFSPSDCPDLH 502
Query: 361 DSWGIEFEHLYSQYEEE---GRAKM--VISARKLWFEILNSQIETGTPYMLFKDSCNRKS 415
D +G FE Y YEE+ G K+ + A KLW +IL+ ETG P++ FKD CN +S
Sbjct: 503 DLYGKAFEKAYVGYEEKAARGDLKLFKTVEAAKLWRKILSMLFETGHPWITFKDPCNIRS 562
Query: 416 NQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDS 475
QQ++G + SSNLCTEI ++ E AVCNL S+ L R+++ D+
Sbjct: 563 PQQHVGVVHSSNLCTEITLNTNENEIAVCNLGSVNLTRHLKPA---------------DN 607
Query: 476 KNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLG 535
+ D E+L + + L+ +ID+N+Y + R SNLRHRP+G+G+ G D ++
Sbjct: 608 GELVLDHEKLQKTVGVAMRMLDNVIDINYYAVAKARNSNLRHRPVGMGMMGFQDALHMMR 667
Query: 536 LPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN---- 591
P+ S +A + + E I Y+A +AS ELA + G Y T+ GS KGI+ +D
Sbjct: 668 KPYASRDAVEFADESMEAICYYAYEASTELAAERGAYSTFKGSLWDKGIMPLDSLKLLEE 727
Query: 592 -------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+ S R DW +LR I K+G+RNS VA PTA+ S I+G EP N+Y
Sbjct: 728 ERGGYVEVDTSSRMDWDALRARIKKHGMRNSNCVAIAPTATISNIIGVAASIEPTFQNLY 787
Query: 645 TRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWE 704
+ LSGEF +VN+HL++DL LG+W + + + Y +GSV KI IPE+LK +Y T +E
Sbjct: 788 VKSNLSGEFTIVNEHLVRDLKRLGIWDEVMISDLKYFDGSVMKIDRIPEDLKRLYATAFE 847
Query: 705 IKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAA 764
+ + LV+ AA R +IDQ QSLNI+M +L + AW +G+KT YYLRT A
Sbjct: 848 MDPRWLVEAAARRQKWIDQGQSLNIYMAGVSGKRLDDTYKLAWIRGLKT-TYYLRTIGAT 906
Query: 765 DAIKFTVDTSVLNNEKANRA--------------DNDVEANLAQVVCSLK----NQEECM 806
A K T+ LN+ A N E + VC+++ +EC
Sbjct: 907 HAEKSTLAGGELNSVNAEGGASAAFTSAPATGLVPNLPEQEIEGKVCTMRPGDAGFDECE 966
Query: 807 AC 808
AC
Sbjct: 967 AC 968
>gi|224825452|ref|ZP_03698557.1| ribonucleoside-diphosphate reductase, alpha subunit
[Pseudogulbenkiania ferrooxidans 2002]
gi|224602373|gb|EEG08551.1| ribonucleoside-diphosphate reductase, alpha subunit
[Pseudogulbenkiania ferrooxidans 2002]
Length = 949
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 320/836 (38%), Positives = 475/836 (56%), Gaps = 58/836 (6%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V++++G K P+ K+ A ++ GL++ D +L + +Y GV+ ++++ A
Sbjct: 141 VVRKNGAKLPLDIAKLRATIESACVGLAETDVDAILT--ETLKNIYDGVSEEEVNKSAIL 198
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLH-KITKNSFS-ETIKDMYNYYNKRSGKK---ASLVA 117
A AM P Y + R+ ++N+ +I + S E + + Y Y ++ KK A L+
Sbjct: 199 AARAMIEQDPAYDYVTARLLLNNIRLEILGEAVSQEEMGECYVSYFPQAIKKGIAAELLD 258
Query: 118 DDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
+ + E +K L A+ RD F Y G +TL Y L ++ +E PQ MRV++G
Sbjct: 259 ERLGEYDLKK---LGAALDASRDLQFGYLGLQTLYDRYFLHVNGTRIEMPQAFYMRVAMG 315
Query: 178 IHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ ++ + A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+
Sbjct: 316 LALNEVEREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTIADD-LDGIYEG 374
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 375 IKENALLSKFAGGLGNDWTPVRAMGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 433
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV D +W+L PS
Sbjct: 434 GAVCAYLETWHLDIEEFVELRKNTGDDRRRTHDMNTANWIPDLFMKRVMDGAEWTLLSPS 493
Query: 355 DASGLADSWGIEFEHLYSQYEE-EGRAKMVISAR----KLWFEILNSQIETGTPYMLFKD 409
+ L D G FE Y +YE R ++ +S R LW ++L ETG P++ FKD
Sbjct: 494 ECPDLHDLVGAAFEKRYQEYEAMAARGEIKVSKRIPALSLWRKMLTMLFETGHPWITFKD 553
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
CN +S Q ++G + SSNLCTEI ++ +E AVCNL S+ L R+++ G
Sbjct: 554 PCNIRSPQGHMGVVHSSNLCTEITLNTNDDEIAVCNLGSVNLARHMQADGT--------- 604
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
D +L +I L+ +ID+N YP++ R SNL+HRP+G+GI G D
Sbjct: 605 ----------LDGAKLQRTIRIAMRMLDNVIDINFYPVKKARNSNLKHRPVGMGIMGFQD 654
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
+ +P+ S EA + + E + YHA AS+ELA + G Y +Y GS +G+L D
Sbjct: 655 CLHMKRIPYASQEAVEFADESMELVAYHAYWASSELAQERGRYPSYKGSLWDRGVLPHDS 714
Query: 590 WNITP-----------SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
N+ ++R DW+ LRE I ++G+RNS +A PTA+ + I+G + EP
Sbjct: 715 INLLAAERGGYLDVDRTERLDWNKLRERIKEHGMRNSNCLAIAPTATIANIIGVSASIEP 774
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N++ + LSGEF V N+HL++DL +LGLW + + + Y +GS+ +I IP ELKAI
Sbjct: 775 TYQNLFVKSNLSGEFTVTNEHLVRDLKKLGLWDEVMVSDLKYFDGSLGRIDRIPAELKAI 834
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +E+ K LVD A+ R +IDQ+QSLN++M KL L+ YAW +G+KT YYL
Sbjct: 835 YATAFEMDPKWLVDAASRRQKWIDQAQSLNLYMAGASGKKLDELYKYAWVRGLKT-TYYL 893
Query: 759 RTRAAADAIKFTVDTSVLNNEKAN----RADNDVEANLA--QVVCSLKNQEECMAC 808
RT AA A K T LN A A +V+ A CS+ N +C AC
Sbjct: 894 RTLAATSAEKSTGRGGELNAVSATTPAVSAAPEVDNTPATDAKFCSIDN-PDCEAC 948
>gi|347539724|ref|YP_004847149.1| ribonucleoside-diphosphate reductase subunit alpha
[Pseudogulbenkiania sp. NH8B]
gi|345642902|dbj|BAK76735.1| ribonucleoside-diphosphate reductase, alpha subunit
[Pseudogulbenkiania sp. NH8B]
Length = 949
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 320/836 (38%), Positives = 475/836 (56%), Gaps = 58/836 (6%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V++++G K P+ K+ A ++ GL++ D +L + +Y GV+ ++++ A
Sbjct: 141 VVRKNGAKLPLDIAKLRATIESACTGLAETDVDAILT--ETLKNIYDGVSEEEVNKSAIL 198
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLH-KITKNSFS-ETIKDMYNYYNKRSGKK---ASLVA 117
A AM P Y + R+ ++N+ +I + S E + + Y Y ++ KK A L+
Sbjct: 199 AARAMIEQDPAYDYVTARLLLNNIRLEILGEAVSQEEMGECYVSYFPQAIKKGIAAELLD 258
Query: 118 DDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
+ + E +K L A+ RD F Y G +TL Y L ++ +E PQ MRV++G
Sbjct: 259 ERLGEYDLKK---LGAALDASRDLQFGYLGLQTLYDRYFLHVNGTRIEMPQAFYMRVAMG 315
Query: 178 IHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ ++ + A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+
Sbjct: 316 LALNEVEREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTIADD-LDGIYEG 374
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 375 IKENALLSKFAGGLGNDWTPVRAMGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 433
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV D +W+L PS
Sbjct: 434 GAVCAYLETWHLDIEEFVELRKNTGDDRRRTHDMNTANWIPDLFMKRVMDGAEWTLLSPS 493
Query: 355 DASGLADSWGIEFEHLYSQYEE-EGRAKMVISAR----KLWFEILNSQIETGTPYMLFKD 409
+ L D G FE Y +YE R ++ +S R LW ++L ETG P++ FKD
Sbjct: 494 ECPDLHDLVGAAFEKRYQEYEAMAARGEIKVSKRIPALSLWRKMLTMLFETGHPWITFKD 553
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
CN +S Q ++G + SSNLCTEI ++ +E AVCNL S+ L R+++ G
Sbjct: 554 PCNIRSPQGHMGVVHSSNLCTEITLNTNDDEIAVCNLGSVNLARHMQADGT--------- 604
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
D +L +I L+ +ID+N YP++ R SNL+HRP+G+GI G D
Sbjct: 605 ----------LDGAKLQRTIRIAMRMLDNVIDINFYPVKKARNSNLKHRPVGMGIMGFQD 654
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
+ +P+ S EA + + E + YHA AS+ELA + G Y +Y GS +G+L D
Sbjct: 655 CLHMKRIPYASQEAVEFADESMELVAYHAYWASSELAQERGRYPSYKGSLWDRGVLPHDS 714
Query: 590 WNITP-----------SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
N+ ++R DW+ LRE I ++G+RNS +A PTA+ + I+G + EP
Sbjct: 715 INLLAAERGGYLDVDRTERLDWNKLRERIKEHGMRNSNCLAIAPTATIANIIGVSASIEP 774
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N++ + LSGEF V N+HL++DL +LGLW + + + Y +GS+ +I IP ELKAI
Sbjct: 775 TYQNLFVKSNLSGEFTVTNEHLVRDLKKLGLWDEVMVSDLKYFDGSLGRIDRIPAELKAI 834
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +E+ K LVD A+ R +IDQ+QSLN++M KL L+ YAW +G+KT YYL
Sbjct: 835 YATAFEMDPKWLVDAASRRQKWIDQAQSLNLYMAGASGKKLDELYKYAWVRGLKT-TYYL 893
Query: 759 RTRAAADAIKFTVDTSVLNNEKAN----RADNDVEANLA--QVVCSLKNQEECMAC 808
RT AA A K T LN A A +V+ A CS+ N +C AC
Sbjct: 894 RTLAATSAEKSTGRGGELNAVSATTPAVSAAPEVDNTPATDAKFCSIDN-PDCEAC 948
>gi|348617977|ref|ZP_08884510.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Candidatus Glomeribacter gigasporarum BEG34]
gi|347816682|emb|CCD29168.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Candidatus Glomeribacter gigasporarum BEG34]
Length = 950
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 319/831 (38%), Positives = 463/831 (55%), Gaps = 55/831 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG + P+ D +TA + + GL P + ++ +Y+G Q+ + A A
Sbjct: 145 DGVRRPLDLDALTALIAQACEGLGAA-VKPEPIIEQTLKNLYEGAPLKQIYDSAILAART 203
Query: 67 MTVNHPDYALLAGRVAVSNLHK------ITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
+ P Y+ A R+ + L + +T + + + +R G +A L+ + +
Sbjct: 204 LIEQEPAYSRAAARILLHILRREALGKEVTHAQMAARYARYFPVFVQR-GVRAGLLDEKL 262
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ + A L A++ RD F Y G +TL Y L +D +E PQ LMRV++G+
Sbjct: 263 LQF---DLAMLGQALVAARDLQFSYLGLQTLYDRYFLHIDGARLELPQTFLMRVAMGLAL 319
Query: 181 DDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
++ D A++ YHL+S+ F +TPTLFNAGT + QLSSC+L + DD +EGIY+ LK+
Sbjct: 320 NEADRNARAVEFYHLLSRFDFMSSTPTLFNAGTRRSQLSSCYLTTVADD-LEGIYEALKE 378
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
A++SK AGG+G +RA G++I GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 379 NALLSKFAGGLGNDWTRVRALGAHIQGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAV 437
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
YLE WH DI EFL+LRKN G + RA D+ A W+PDLFM+RV D +W+LF PSD
Sbjct: 438 CAYLETWHLDIEEFLELRKNTGDDRRRAHDMNTANWIPDLFMKRVLADAQWTLFSPSDCP 497
Query: 358 GLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDSCN 412
L + +G +FE Y YEE+ G K+ + A +LW ++L ETG P++ FKD CN
Sbjct: 498 DLHEKYGADFEAAYLDYEEKAARGEIKLFKKMPAAQLWRKMLGMLFETGHPWVTFKDPCN 557
Query: 413 RKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
+S QQ++G + SSNLCTEI ++ E AVCNL SI L ++R +
Sbjct: 558 IRSPQQHVGVVHSSNLCTEITLNTNDSEIAVCNLGSINLVAHLR---------------A 602
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D+ D ++L + + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 603 ADNGALRLDHDKLKKTIQTALRMLDNVIDINYYAVAKARDSNLKHRPVGLGIMGFQDCLH 662
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
L +P+ S A + E + Y+A AS ELA + G Y +Y GS S+GIL D +
Sbjct: 663 ALRIPYASEVAVEFADRSMEAVCYYAYWASTELAQERGRYSSYDGSLWSRGILPQDTLAL 722
Query: 593 TPSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTS 641
R DW +LR I++ G+RNS VA PTA+ S I+G + C EP
Sbjct: 723 LAQARGGHVEVDESGTLDWEALRRRIARYGMRNSNCVAIAPTATISNIVGVSACIEPTYQ 782
Query: 642 NIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKT 701
N++ + LSGEF VVN++L++DL LW + + Y +G +++I +P +L+ +Y T
Sbjct: 783 NLFVKSNLSGEFTVVNEYLVRDLKARDLWDAVMIADLKYFDGMLARIDRVPADLRDLYAT 842
Query: 702 VWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTR 761
+EI K LV+ AA R +IDQSQSLNI+M KL ++ AW +G+KT YYLRT
Sbjct: 843 AFEIDPKWLVEAAARRQKWIDQSQSLNIYMAGASGKKLDEIYRLAWRRGLKT-TYYLRTM 901
Query: 762 AAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLK----NQEECMAC 808
AA K TV LN A ++ A+ A VC+L+ N E C C
Sbjct: 902 AATHIEKSTVAHGALN---AVAMSSESSAHSAPQVCALRPDDVNFEACEVC 949
>gi|373448933|gb|AEY74312.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 383
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 248/383 (64%), Positives = 310/383 (80%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
M+VIKR+G KE V FDKIT+R++KL YGL+ +H DP+ +A KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
AE AA T HPDYA+LA R+AVSNLHK TK FSE ++D++NY N ++GK + +++
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+I+ K L+ IIY+RDF ++YFGFKTLE+SYLLK+++++VERPQHMLMRV+VGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAI 240
D DSA++TY+L+S+ WFTHA+PTLFNAGT + Q+SSCFLL M DDSIEGIYDTLK+CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIY 300
ISK AGGIGLSI NIRASGSYI GTNG SNGI+PML+V+N+TARY+DQGG KR G AIY
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLA 360
LEPWH+DI FLDL+KN G EE R RDLF ALW+PDLFM+RV+DDG+WSL C + SGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCLDECSGLN 360
Query: 361 DSWGIEFEHLYSQYEEEGRAKMV 383
+ WG EFE LY+QYE E R K +
Sbjct: 361 NVWGDEFERLYTQYEREKRYKTI 383
>gi|269839639|ref|YP_003324331.1| ribonucleoside-diphosphate reductase subunit alpha [Thermobaculum
terrenum ATCC BAA-798]
gi|269791369|gb|ACZ43509.1| ribonucleoside-diphosphate reductase, alpha subunit [Thermobaculum
terrenum ATCC BAA-798]
Length = 819
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 310/796 (38%), Positives = 457/796 (57%), Gaps = 56/796 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V+ +G P+ D++ L+ GL + CDP +A +V +Y VT Q+
Sbjct: 15 VVSPEGGLVPLDPDRVRRHLQHACRGLPE--CDPDELANEVVRSLYDRVTPEQIRSAMIL 72
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHK------ITKNSFSETIKDMYNYYNKRSGKKASLV 116
A A P Y +A R+ + +++ ++ + T ++M+ Y A +
Sbjct: 73 AARARIERDPAYDKVASRLMLEQIYQESWGWVPSEAELAATYREMFPRY-----VHACIS 127
Query: 117 ADDVYEIIMK-NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVS 175
A + E + + + A L A+ +RD Y G +TL YLL ++ R +E PQ+ MRV+
Sbjct: 128 AGRLSEELARFDLARLASALRPERDEKLRYIGLQTLYDRYLLDVEGRRLEAPQYFWMRVA 187
Query: 176 VGI--HKDDTDS-ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIY 232
+G+ +DD ++ A + Y L+S F ATPTLFN+GTP PQLSSC+L ++DD +E I+
Sbjct: 188 MGLALREDDPNARAAQFYDLLSSLRFVSATPTLFNSGTPHPQLSSCYLSTVEDD-LEHIF 246
Query: 233 DTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGK 292
+ A +SK AGG+G +RA+G+ I GT+G S G++P L++ NDTA V+QGG K
Sbjct: 247 KVIGDNAKLSKWAGGLGNDWTRVRATGALIRGTHGKSQGVIPFLKIVNDTAVAVNQGG-K 305
Query: 293 RKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFC 352
RKGA YLEPWH D EFL+LRKN G E R D+ A WVPDLFM RV++ G W+LF
Sbjct: 306 RKGAVCCYLEPWHLDFEEFLELRKNTGDERRRTHDMHTASWVPDLFMRRVQEGGTWTLFS 365
Query: 353 PSDASGLADSWGIEFEHLYSQYE---EEG--RAKMVISARKLWFEILNSQIETGTPYMLF 407
P++ L + +G FE Y +YE EEG R + A+ LW ++L+ ETG P++ F
Sbjct: 366 PNEVPDLHELYGRAFERRYVEYERMAEEGKLRQHKRVDAKMLWRKMLSMLWETGHPWIAF 425
Query: 408 KDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVS 467
KD N +S Q ++G I SSNLCTEI+ +S EETAVCNL SI L ++ G+
Sbjct: 426 KDPSNIRSAQDHVGVIHSSNLCTEILLPTSREETAVCNLGSINLVEHLSGDGL------- 478
Query: 468 KLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGL 527
D +LAE + L+ +ID+N YP RRSNLRHRPIG+GI G
Sbjct: 479 -------------DEAKLAETVRTAVRMLDNVIDINFYPTPEARRSNLRHRPIGLGIMGF 525
Query: 528 ADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQV 587
D + L +P+ SP+A + + E I +HA+ AS+ELA + G Y +Y GS S+G+L +
Sbjct: 526 HDALLALRIPYASPQAVEFSDQTMELISWHAIMASSELAAERGRYPSYQGSKWSRGLLPI 585
Query: 588 DMWNITPSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D + +R DW +RE +++ GVRNS ++A PTA+ S I G ++
Sbjct: 586 DTIELLERERGGDLEMDRTARLDWGPVREAVARWGVRNSQIMAIAPTATISNIAGVSQSI 645
Query: 637 EPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELK 696
EP+ N++ + LSG+F +VN +L++DL LGLWS + +I Y +GS+ I EIP+E+K
Sbjct: 646 EPHYRNLFVKSNLSGDFTIVNPYLVEDLKRLGLWSQEMLDRIKYYDGSILPIEEIPDEVK 705
Query: 697 AIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMY 756
+Y T EI L++ A+ R ++D QSLNI++ +P KL ++F AW KG+KT Y
Sbjct: 706 HLYLTAHEIDPLWLIECASRRQKWVDMGQSLNIYVAEPSGKKLHEIYFAAWRKGLKT-TY 764
Query: 757 YLRTRAAADAIKFTVD 772
YLR A + K ++D
Sbjct: 765 YLRAVGATNVEKASMD 780
>gi|374620691|ref|ZP_09693225.1| ribonucleoside-diphosphate reductase, alpha subunit [gamma
proteobacterium HIMB55]
gi|374303918|gb|EHQ58102.1| ribonucleoside-diphosphate reductase, alpha subunit [gamma
proteobacterium HIMB55]
Length = 962
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 318/837 (37%), Positives = 461/837 (55%), Gaps = 60/837 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V+ DG +P+ ++I + + LS + + +Y GVT +L
Sbjct: 154 VVGADGTSKPLDIERIRTIVAEACMDLSD--VSEAAIIDEALKNLYNGVTEQELSTSLVI 211
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLH----KITKNSFSETIKDMYNYYNK------RSGKK 112
TA M P+Y+ +A R+ + NL + S T DM YY + G +
Sbjct: 212 TARTMIEQEPNYSSVAARLLLDNLRAEGLSFLNVAESATQGDMATYYPQALKSFISRGIE 271
Query: 113 ASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLM 172
L+A ++ E + L A++ +RD F Y G +TL Y + D E PQ M
Sbjct: 272 LELLAPNLAEYDLD---MLGDALLPERDLQFSYLGLQTLYDRYFIHSDETRFELPQLFFM 328
Query: 173 RVSVGI--HKDDTDS-ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
RV++G+ +DD ++ A++ Y L+S + +TPTLFN+GT +PQLSSC+L + DD +
Sbjct: 329 RVAMGLATREDDKNARAIEFYQLLSSFDYMSSTPTLFNSGTLRPQLSSCYLTTVPDD-LH 387
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
GIY ++ A++SK AGG+G +RA G+YI GTNG S G+VP L+V NDTA V+QG
Sbjct: 388 GIYGAIQDNAMLSKFAGGLGNDWTPVRALGAYIKGTNGKSQGVVPFLKVVNDTAVAVNQG 447
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G KRKGA YLE WH DI EFL+LRKN G + R D+ A WVPDLFM+RV +DG W+
Sbjct: 448 G-KRKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVFEDGDWT 506
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRA-----KMVISARKLWFEILNSQIETGTPY 404
LF P+D L D +G FE Y+QYEE+ R + A+ LW ++L ETG P+
Sbjct: 507 LFSPNDVPDLHDLYGTAFEERYTQYEEQARTGELKLHKTLKAQALWRKMLGMIFETGHPW 566
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD CN +S QQ+ G + SSNLCTEI +S +E AVCNL S+ LP+++ E G +
Sbjct: 567 ITFKDPCNIRSPQQHCGVVHSSNLCTEITLNTSKDEIAVCNLGSVNLPQHI-ENG---EL 622
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
N+ KL + + R+ D +ID+N+Y +ET+ SN++HRPIG+G+
Sbjct: 623 NIDKLRKTVTTAIRMLD----------------NVIDINYYSVETSENSNMKHRPIGLGL 666
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D + + S +A + E I Y A+ AS +LA + G Y +Y GS S+GI
Sbjct: 667 MGFQDALYKTDISYASEQAVEFADKSMEAISYFAISASTDLAAERGAYSSYEGSLWSQGI 726
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
+D N+ R DW +LR +++ G+RNS ++A PTA+ + I G
Sbjct: 727 FPIDSLNMLVEQRGADYISVNQDSSMDWDALRGKVAQQGMRNSNVMAIAPTATIANITGV 786
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF VVN +L++DL E GLW + + Y +GSV + IP
Sbjct: 787 SQSIEPTYQNLYVKSNLSGEFTVVNPYLVRDLKERGLWDKVMVNDLKYFDGSVQAVDRIP 846
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+LKA Y T +E++ + LVD A+ R +IDQ+QSLN+++ KL + AW G+K
Sbjct: 847 ADLKAKYATAFEVEPRWLVDAASRRQKWIDQAQSLNLYINNASGKKLDVTYRMAWYSGLK 906
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLNNEKANRAD-NDVEANLAQVVCSLKNQEECMAC 808
T YYLR+ AA K TV+T LN A+ V+ CSL + +C AC
Sbjct: 907 T-TYYLRSLAATGTEKSTVNTGQLNAVSQQAAEAAPVQPAPVPKACSL-DDPDCEAC 961
>gi|114332418|ref|YP_748640.1| ribonucleotide-diphosphate reductase subunit alpha [Nitrosomonas
eutropha C91]
gi|114309432|gb|ABI60675.1| ribonucleoside-diphosphate reductase, alpha subunit [Nitrosomonas
eutropha C91]
Length = 957
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 319/832 (38%), Positives = 464/832 (55%), Gaps = 55/832 (6%)
Query: 4 IKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAET 63
I +G++ P+ ++TAR++ L + L+ + + +Y GV ++ + A +
Sbjct: 153 IVENGQRIPLDPSRLTARIESACQHLGNV-VNAGLIVKAMLRDLYDGVPAEEVRKSAILS 211
Query: 64 AAAMTVNHPDYALLAGRVAVSNL-HKITKNSFS-ETIKDMYNYYNK---RSGKKASLVAD 118
A A+ P Y+ + R+ + N+ H++ S E ++ Y Y R G +A L+ +
Sbjct: 212 ARALIEKEPAYSFVTARLLLDNIRHEVLGEDVSHEAMQSRYADYFPGFIRQGMEAGLLDE 271
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + + A L +I DRD F Y G +TL Y L + R +E PQ MRV++G+
Sbjct: 272 RLGQF---DLARLSETLIADRDLQFGYLGLQTLYDRYFLHISERRIELPQAFFMRVAMGL 328
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ YHL+S F +TPTLFN+GT + QLSSC+L + D S++GIY+ +
Sbjct: 329 ALNEIDREARAIEFYHLLSTFDFMSSTPTLFNSGTRRSQLSSCYLSTVPD-SLDGIYEAI 387
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA G+ I GTNG S G+VP L+V +DTA V+QGG KRKG
Sbjct: 388 KENALLSKFAGGLGNDWTPVRAMGARIKGTNGKSQGVVPFLKVVSDTAVAVNQGG-KRKG 446
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A+WVPDLFM+R+ +D +W+LF PSD
Sbjct: 447 AVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTAVWVPDLFMKRMLEDQEWTLFSPSD 506
Query: 356 ASGLADSWGIEFEHLYSQYEEE---GRAKM--VISARKLWFEILNSQIETGTPYMLFKDS 410
L + +G FE Y YEE+ GR + I AR+LW ++L ETG P++ FKD
Sbjct: 507 TPDLHEKYGKAFEEAYIAYEEQATQGRLALHKRIPARQLWRKMLTMLFETGHPWITFKDP 566
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S Q ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 567 CNIRSPQNHVGVVHSSNLCTEITLNTNEKEIAVCNLGSINLPAHIV-------------- 612
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D K D +L + L+ +ID+N Y + R +NLRHRP+G+GI G D
Sbjct: 613 ---DGK---LDLTKLKQTVATAMRMLDNVIDINFYAVAKARNANLRHRPVGLGIMGFQDC 666
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
LG+ + S EA + E + YH AS ELA + G Y TY GS +GIL D
Sbjct: 667 LHKLGISYASREAVEFADSSMEAVAYHTYWASTELAEERGTYATYHGSLWERGILPQDSL 726
Query: 591 NITPSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ +R DW+ LRE I + G+RNS +A PTA+ S I+G + EP
Sbjct: 727 ALLQEERGGHVEVDTSSTLDWTPLRERIKQYGMRNSNCLAIAPTATISNIIGVSASIEPT 786
Query: 640 TSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
N+Y + LSGEF VVN+ L+ DL + LW + + + +G+ SKI IPE L+A+Y
Sbjct: 787 YQNLYVKSNLSGEFTVVNQSLVNDLKKQDLWDEVMIADLKHYDGAASKIDRIPENLRALY 846
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
T +EI + LV+ AA R +IDQ+QSLN++M K+ L+ AW +G+KT YYLR
Sbjct: 847 ATAFEIDPRWLVEAAARRQKWIDQAQSLNLYMSGASGKKMDDLYRLAWLRGLKT-TYYLR 905
Query: 760 TRAAADAIKFTVDTSVLNNEKANR---ADNDVEANLAQVVCSLKNQEECMAC 808
A A K TV T LN A + D+ + + A C++ + EC AC
Sbjct: 906 AMGATTAEKSTVHTGTLNAVPAQQNGHTDSSGQIHSATKQCAI-DDPECEAC 956
>gi|221213240|ref|ZP_03586215.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD1]
gi|221166692|gb|EED99163.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD1]
Length = 995
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 315/798 (39%), Positives = 448/798 (56%), Gaps = 52/798 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G P+ + + A + GL +P + + +Y GV +Q+ + A A
Sbjct: 160 NGVTRPLDMNALRALIVSACEGLGAA-VNPDPIVAETVKNLYDGVPMSQVYDSAILAART 218
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVAD 118
M P Y+ + R+ LH I + E + DM Y + + G +A L+ D
Sbjct: 219 MIEKDPAYSQVTARIL---LHTIRREILGEEVVQADMSTRYAEYFPQFLKRGVEAGLLDD 275
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + +K L A+ RD F Y G +TL Y L +D +E PQ MRV++G+
Sbjct: 276 KLLQFDLKR---LGEALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGL 332
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+ L
Sbjct: 333 SLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEAL 391
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 392 KENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 450
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + G+W+LF PS
Sbjct: 451 AVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGEWTLFSPST 510
Query: 356 ASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G +FE Y+ YEE+ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 511 CPDLHDKFGADFEAAYTAYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDP 570
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ LV
Sbjct: 571 CNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHLV 616
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 617 KQPDGTYAL-DHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGLGIMGFQDC 675
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 676 LHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTL 735
Query: 591 N-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ S+ DW++LR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 736 KLLAEARGGYVEVDSSESLDWATLRARIATHGMRNSNCVAIAPTATISNIIGVSACIEPT 795
Query: 640 TSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AIY
Sbjct: 796 FQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIY 855
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
T +E+ K LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYLR
Sbjct: 856 ATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-TYYLR 914
Query: 760 TRAAADAIKFTVDTSVLN 777
T AA K TV LN
Sbjct: 915 TMAATHVEKSTVAHGALN 932
>gi|421477360|ref|ZP_15925187.1| ribonucleoside-diphosphate reductase, alpha subunit, partial
[Burkholderia multivorans CF2]
gi|400226640|gb|EJO56703.1| ribonucleoside-diphosphate reductase, alpha subunit, partial
[Burkholderia multivorans CF2]
Length = 957
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 315/798 (39%), Positives = 448/798 (56%), Gaps = 52/798 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G P+ + + A + GL +P + + +Y GV +Q+ + A A
Sbjct: 160 NGVTRPLDMNALRALIVSACDGLGAA-VNPDPIVAETVKNLYDGVPMSQVYDSAILAART 218
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVAD 118
M P Y+ + R+ LH I + E + DM Y + + G +A L+ D
Sbjct: 219 MIEKDPAYSQVTARIL---LHTIRREILGEEVVQADMSTRYAEYFPQFLKRGVEAGLLDD 275
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + +K L A+ RD F Y G +TL Y L +D +E PQ MRV++G+
Sbjct: 276 KLLQFDLKR---LGEALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGL 332
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+ L
Sbjct: 333 SLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEAL 391
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 392 KENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 450
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + G+W+LF PS
Sbjct: 451 AVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGEWTLFSPST 510
Query: 356 ASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G +FE Y+ YEE+ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 511 CPDLHDKFGADFEAAYTAYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDP 570
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ LV
Sbjct: 571 CNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHLV 616
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 617 KQPDGTYAL-DHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGLGIMGFQDC 675
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 676 LHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTL 735
Query: 591 N-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ S+ DW++LR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 736 KLLAEARGGYVEVDSSESLDWATLRARIATHGMRNSNCVAIAPTATISNIIGVSACIEPT 795
Query: 640 TSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AIY
Sbjct: 796 FQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIY 855
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
T +E+ K LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYLR
Sbjct: 856 ATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-TYYLR 914
Query: 760 TRAAADAIKFTVDTSVLN 777
T AA K TV LN
Sbjct: 915 TMAATHVEKSTVAHGALN 932
>gi|421473516|ref|ZP_15921619.1| ribonucleoside-diphosphate reductase, alpha subunit, partial
[Burkholderia multivorans ATCC BAA-247]
gi|400220732|gb|EJO51244.1| ribonucleoside-diphosphate reductase, alpha subunit, partial
[Burkholderia multivorans ATCC BAA-247]
Length = 939
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 315/798 (39%), Positives = 448/798 (56%), Gaps = 52/798 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G P+ + + A + GL +P + + +Y GV +Q+ + A A
Sbjct: 160 NGVTRPLDMNALRALIVSACDGLGAA-VNPDPIVAETVKNLYDGVPMSQVYDSAILAART 218
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVAD 118
M P Y+ + R+ LH I + E + DM Y + + G +A L+ D
Sbjct: 219 MIEKDPAYSQVTARIL---LHTIRREILGEEVVQADMSTRYAEYFPQFLKRGVEAGLLDD 275
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + +K L A+ RD F Y G +TL Y L +D +E PQ MRV++G+
Sbjct: 276 KLLQFDLKR---LGEALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGL 332
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+ L
Sbjct: 333 SLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEAL 391
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 392 KENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 450
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + G+W+LF PS
Sbjct: 451 AVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGEWTLFSPST 510
Query: 356 ASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G +FE Y+ YEE+ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 511 CPDLHDKFGADFEAAYTAYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDP 570
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ LV
Sbjct: 571 CNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHLV 616
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 617 KQPDGTYAL-DHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGLGIMGFQDC 675
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 676 LHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTL 735
Query: 591 N-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ S+ DW++LR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 736 KLLAEARGGYVEVDSSESLDWATLRARIATHGMRNSNCVAIAPTATISNIIGVSACIEPT 795
Query: 640 TSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AIY
Sbjct: 796 FQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIY 855
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
T +E+ K LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYLR
Sbjct: 856 ATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-TYYLR 914
Query: 760 TRAAADAIKFTVDTSVLN 777
T AA K TV LN
Sbjct: 915 TMAATHVEKSTVAHGALN 932
>gi|73542625|ref|YP_297145.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia
eutropha JMP134]
gi|72120038|gb|AAZ62301.1| Ribonucleoside-diphosphate reductase [Ralstonia eutropha JMP134]
Length = 979
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 314/796 (39%), Positives = 449/796 (56%), Gaps = 50/796 (6%)
Query: 8 GRKEPVRFDKITARLKKLSYGLSKE-HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
G +P+ + L GL K +P+L ++ +Y+GV TQ+ + A A
Sbjct: 162 GVTKPLDIVALHDLLDTACAGLGKAVSAEPIL--KETLKNLYEGVPMTQVYDSAILAART 219
Query: 67 MTVNHPDYALLAGRVAVSNLHK------ITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
+ PDY+ + R+ + + K +T+ + + + + R G A L+ +
Sbjct: 220 LIEKDPDYSQVTARILLHTIRKEILGAEVTQAEMTTRYAEYFPKFIAR-GIAAELLDE-- 276
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
++ + A L A+ RDF F+Y G +TL Y L +D +E PQ MRV++G+
Sbjct: 277 -KLATFDLARLGAALDAGRDFQFNYLGLQTLYDRYFLHIDETRIEMPQAFFMRVAMGLAL 335
Query: 181 DDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
++ D A++ Y L+S F +TPTLFN+GT + QLSSC+L + DD +EGIY+ LK+
Sbjct: 336 NEADREARAIEFYQLLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKE 394
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
A++SK AGG+G N+RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 395 NALLSKFAGGLGNDWTNVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAV 453
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV ++G+W+LF PS
Sbjct: 454 CAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMENGEWTLFSPSTCP 513
Query: 358 GLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDSCN 412
L D G FE Y YE + G K+ + A +LW ++L ETG P++ FKD CN
Sbjct: 514 DLHDKVGKAFEQAYLGYEAKAASGELKLFKKVPAMQLWRKMLGMLFETGHPWITFKDPCN 573
Query: 413 RKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
+S QQ++G + SSNLCTEI ++ E AVCNL S+ L V+ L
Sbjct: 574 IRSPQQHVGVVHSSNLCTEITLNTNDSEIAVCNLGSVNL--------------VAHLTKQ 619
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D + + D +L + + L+ +ID+N+Y +E R SNLRHRP+G+GI G D
Sbjct: 620 ADG-SYVLDHAKLQKTIRTAMRMLDNVIDINYYAVEKARNSNLRHRPVGMGIMGFQDCLH 678
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
+L P+ S A + E + Y+A +AS ELA + G YETY GS +GIL D +
Sbjct: 679 VLRTPYASDAAVKFADTSMEAVCYYAYQASTELAEERGRYETYAGSLWDRGILPQDSLKL 738
Query: 593 TPSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTS 641
+R DW SLR I ++G+RNS +A PTA+ S I+G + C EP
Sbjct: 739 LAEERGGYLEVDHSSSMDWDSLRGRIKQHGMRNSNCIAIAPTATISNIIGVSACIEPTFQ 798
Query: 642 NIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKT 701
N+Y + LSGEF VVN +L++DL E GLW + + Y +GS+S+I IP++L+ IY T
Sbjct: 799 NLYVKSNLSGEFTVVNDYLVRDLKERGLWDEVMVADLKYFDGSLSRIDRIPQDLRDIYAT 858
Query: 702 VWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTR 761
+E++ LV+ A+ R +IDQ+QSLNI+M KL + AW +G+KT YYLRT
Sbjct: 859 AFEVEPTWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTM 917
Query: 762 AAADAIKFTVDTSVLN 777
AA K TV LN
Sbjct: 918 AATHVEKSTVSRGSLN 933
>gi|161525958|ref|YP_001580970.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
multivorans ATCC 17616]
gi|221202416|ref|ZP_03575448.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD2M]
gi|221208124|ref|ZP_03581129.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD2]
gi|160343387|gb|ABX16473.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans ATCC 17616]
gi|221172027|gb|EEE04469.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD2]
gi|221177693|gb|EEE10108.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD2M]
Length = 995
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 315/798 (39%), Positives = 448/798 (56%), Gaps = 52/798 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G P+ + + A + GL +P + + +Y GV +Q+ + A A
Sbjct: 160 NGVTRPLDMNALRALIVSACDGLGAA-VNPDPIVAETVKNLYDGVPMSQVYDSAILAART 218
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVAD 118
M P Y+ + R+ LH I + E + DM Y + + G +A L+ D
Sbjct: 219 MIEKDPAYSQVTARIL---LHTIRREILGEEVVQADMSTRYAEYFPQFLKRGVEAGLLDD 275
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + +K L A+ RD F Y G +TL Y L +D +E PQ MRV++G+
Sbjct: 276 KLLQFDLKR---LGEALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGL 332
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+ L
Sbjct: 333 SLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEAL 391
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 392 KENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 450
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + G+W+LF PS
Sbjct: 451 AVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGEWTLFSPST 510
Query: 356 ASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G +FE Y+ YEE+ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 511 CPDLHDKFGADFEAAYTAYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDP 570
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ LV
Sbjct: 571 CNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHLV 616
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 617 KQPDGTYAL-DHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGLGIMGFQDC 675
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 676 LHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTL 735
Query: 591 N-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ S+ DW++LR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 736 KLLAEARGGYVEVDSSESLDWATLRARIATHGMRNSNCVAIAPTATISNIIGVSACIEPT 795
Query: 640 TSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AIY
Sbjct: 796 FQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIY 855
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
T +E+ K LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYLR
Sbjct: 856 ATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-TYYLR 914
Query: 760 TRAAADAIKFTVDTSVLN 777
T AA K TV LN
Sbjct: 915 TMAATHVEKSTVAHGALN 932
>gi|189349323|ref|YP_001944951.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
multivorans ATCC 17616]
gi|189333345|dbj|BAG42415.1| ribonucleoside-diphosphate reductase alpha chain [Burkholderia
multivorans ATCC 17616]
Length = 997
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 315/798 (39%), Positives = 448/798 (56%), Gaps = 52/798 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G P+ + + A + GL +P + + +Y GV +Q+ + A A
Sbjct: 162 NGVTRPLDMNALRALIVSACDGLGAA-VNPDPIVAETVKNLYDGVPMSQVYDSAILAART 220
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVAD 118
M P Y+ + R+ LH I + E + DM Y + + G +A L+ D
Sbjct: 221 MIEKDPAYSQVTARIL---LHTIRREILGEEVVQADMSTRYAEYFPQFLKRGVEAGLLDD 277
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + +K L A+ RD F Y G +TL Y L +D +E PQ MRV++G+
Sbjct: 278 KLLQFDLKR---LGEALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGL 334
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+ L
Sbjct: 335 SLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEAL 393
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 394 KENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 452
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + G+W+LF PS
Sbjct: 453 AVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGEWTLFSPST 512
Query: 356 ASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G +FE Y+ YEE+ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 513 CPDLHDKFGADFEAAYTAYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDP 572
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ LV
Sbjct: 573 CNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHLV 618
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 619 KQPDGTYAL-DHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGLGIMGFQDC 677
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 678 LHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTL 737
Query: 591 N-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ S+ DW++LR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 738 KLLAEARGGYVEVDSSESLDWATLRARIATHGMRNSNCVAIAPTATISNIIGVSACIEPT 797
Query: 640 TSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AIY
Sbjct: 798 FQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIY 857
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
T +E+ K LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYLR
Sbjct: 858 ATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-TYYLR 916
Query: 760 TRAAADAIKFTVDTSVLN 777
T AA K TV LN
Sbjct: 917 TMAATHVEKSTVAHGALN 934
>gi|194290771|ref|YP_002006678.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus
taiwanensis LMG 19424]
gi|193224606|emb|CAQ70617.1| Ribonucleoside-diphosphate reductase alpha subunit [Cupriavidus
taiwanensis LMG 19424]
Length = 979
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 314/796 (39%), Positives = 447/796 (56%), Gaps = 50/796 (6%)
Query: 8 GRKEPVRFDKITARLKKLSYGLSKE-HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
G +P+ + A + GL +P+L ++ +Y+GV TQ+ + A A
Sbjct: 162 GVTKPLDIVALHALIDNACSGLGDAVSAEPIL--KETLKNLYEGVPMTQVYDSAILAART 219
Query: 67 MTVNHPDYALLAGRVAVSNLHK------ITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
+ PDY+ + R+ + + K +T+ + + + + R G A L+ +
Sbjct: 220 LIEKDPDYSQVTARILLHTIRKEILGTEVTQAEMATRYAEYFPKFIAR-GIAAELLDE-- 276
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI-- 178
++ + A L A+ RDF F+Y G +TL Y L +D +E PQ MRV++G+
Sbjct: 277 -KLATFDLARLGAALDAGRDFQFNYLGLQTLYDRYFLHIDETRIEMPQAFFMRVAMGLAL 335
Query: 179 -HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
KD A++ Y L+S F +TPTLFN+GT + QLSSC+L + DD +EGIY+ LK+
Sbjct: 336 NEKDREARAIEFYQLLSSFDFMSSTPTLFNSGTQRSQLSSCYLTTVSDD-LEGIYEALKE 394
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
A++SK AGG+G N+RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 395 NALLSKFAGGLGNDWTNVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAV 453
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV ++ +W+LF PS
Sbjct: 454 CAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMENAEWTLFSPSTCP 513
Query: 358 GLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDSCN 412
L D G FE Y YE + G K+ + A +LW ++L ETG P++ FKD CN
Sbjct: 514 DLHDKVGKAFEKAYLGYEAKAANGELKLFKKVPAMQLWRKMLGMLFETGHPWITFKDPCN 573
Query: 413 RKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
+S QQ++G + SSNLCTEI ++ E AVCNL S+ L V+ L
Sbjct: 574 IRSPQQHVGVVHSSNLCTEITLNTNDSEIAVCNLGSVNL--------------VAHLAKQ 619
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D L D +L + + L+ +ID+N+Y +E R SNLRHRP+G+GI G D
Sbjct: 620 ADGSYAL-DHAKLQKTIRTAMRMLDNVIDINYYAVEKARNSNLRHRPVGMGIMGFQDCLH 678
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNI 592
+L P+ S A + E + Y+A +AS ELA + G YETY GS +GIL D +
Sbjct: 679 VLRTPYSSDAAVKFADTSMEAVCYYAYQASTELAEERGRYETYTGSLWDRGILPQDSLKL 738
Query: 593 TPSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTS 641
+R DW+SLR I ++G+RNS +A PTA+ S I+G + C EP
Sbjct: 739 LAEERGGYLDVDMSSSMDWTSLRARIKQHGMRNSNCIAIAPTATISNIIGVSACIEPTFQ 798
Query: 642 NIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKT 701
N+Y + LSGEF VVN +L++DL E GLW + + Y +GS+S+I IP++L+ IY T
Sbjct: 799 NLYVKSNLSGEFTVVNDYLVRDLKERGLWDEVMVADLKYFDGSLSRIDRIPQDLRDIYAT 858
Query: 702 VWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTR 761
+E++ LV+ A+ R +IDQ+QSLNI+M KL + AW +G+KT YYLRT
Sbjct: 859 AFEVEPTWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTM 917
Query: 762 AAADAIKFTVDTSVLN 777
AA K TV LN
Sbjct: 918 AATHVEKSTVSRGSLN 933
>gi|374370404|ref|ZP_09628408.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus
basilensis OR16]
gi|373098056|gb|EHP39173.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus
basilensis OR16]
Length = 980
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 315/817 (38%), Positives = 451/817 (55%), Gaps = 66/817 (8%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK----- 88
+P+L ++ +Y GV TQ+ + A A + P Y+ + R+ + + K
Sbjct: 187 AEPIL--KETLKNLYDGVPMTQVYDSAILAARTLIEKDPAYSQVTARILLHTIRKEILGA 244
Query: 89 -ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFG 147
+T+ D + + R G +A L+ + ++ + A L A+ RDF F+Y G
Sbjct: 245 EVTQTEMVSRYADYFPKFIAR-GIEAELLDE---KLATYDLARLGAALDAQRDFQFNYLG 300
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGI---HKDDTDSALKTYHLMSQHWFTHATPT 204
+TL Y L +D +E PQ MRV++G+ KD A++ Y L+S F +TPT
Sbjct: 301 LQTLYDRYFLHIDEVRIEMPQAFFMRVAMGLALGEKDREARAIEFYQLLSSFDFMSSTPT 360
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT + QLSSC+L + DD +EGIY+ LK+ A++SK AGG+G N+RA GS+I G
Sbjct: 361 LFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 419
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 420 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 478
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAK 381
D+ A W+PDLFM+RV + G+W+LF P+ L D G FE Y YE + G K
Sbjct: 479 THDMNTANWIPDLFMKRVMEAGEWTLFSPATCPDLHDLVGKAFEQAYLGYEAKAARGELK 538
Query: 382 MV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPE 439
+ I A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI ++
Sbjct: 539 LFKKIPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNES 598
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
E AVCNL S+ L ++++ Q + D +L + + L+ +
Sbjct: 599 EIAVCNLGSVNLVAHLKQLADGTQ---------------VLDHAKLEKTVRTAMRMLDNV 643
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
ID+N+Y +E R SNLRHRP+G+GI G D LL LP+ S A Q E + Y+A
Sbjct: 644 IDINYYAVEKARSSNLRHRPVGMGIMGFQDCLHLLRLPYASDAAVQFADTSMEAVCYYAY 703
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMIS 608
+AS+ELA + G Y TY GS +GIL D + +R DW SLR I
Sbjct: 704 RASSELAEERGRYSTYEGSLWDRGILPQDSLKLLAEERGGYLEVDHSSAMDWDSLRARIK 763
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN++L++DL E G
Sbjct: 764 QHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERG 823
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LW + + Y +G +++I IP++L+ IY T +E++ LV+ A+ R +IDQ+QSLN
Sbjct: 824 LWDEVMVADLKYFDGKLARIDRIPQDLRDIYATAFEVEPSWLVEAASRRQKWIDQAQSLN 883
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDV 788
I+M KL + AW +G+KT YYLRT AA K TV LN +
Sbjct: 884 IYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTVSRGSLNAVSSGSEGGFS 942
Query: 789 EANLAQ-------------VVCSLK----NQEECMAC 808
A + Q VC+++ +EC AC
Sbjct: 943 AAGIDQAAASAPAMPEAEGAVCTMRPGDAGFDECEAC 979
>gi|34497742|ref|NP_901957.1| ribonucleotide-diphosphate reductase subunit alpha [Chromobacterium
violaceum ATCC 12472]
gi|34103598|gb|AAQ59959.1| ribonucleoside-diphosphate reductase system [Chromobacterium
violaceum ATCC 12472]
Length = 972
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 313/836 (37%), Positives = 465/836 (55%), Gaps = 59/836 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V+++DGRK P+ ++ A ++ S L+ D +L + +Y GV ++ + A
Sbjct: 165 VLRKDGRKLPLDVPRLRASIEAASKNLAGIDVDAILA--ETLKNIYDGVPEEEVGKSAIL 222
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLH------KITKNSFSETIKDMYNYYNKRSGKKASLV 116
A +M P Y + R+ + N+ ++++ + + Y K+ G A L+
Sbjct: 223 AARSMIEQDPAYDYVTARLLMGNIRLEILGEAVSQDEMGKQYAPYFADYIKK-GIAAELL 281
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSV 176
+ + E +K L A+ +RD F Y G +TL Y L +D +E PQ MRV++
Sbjct: 282 DEKLAEYDLKK---LGAALDAERDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFYMRVAM 338
Query: 177 GIHKDDT---DSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYD 233
G+ ++ D A++ Y ++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+
Sbjct: 339 GLALNEVNREDRAIEFYKVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTIADD-LDGIYE 397
Query: 234 TLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKR 293
+K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 398 GIKENALLSKFAGGLGNDWTPVRAMGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KR 456
Query: 294 KGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCP 353
KGA YLE WHADI EFL+LRKN G + R D+ A W+PDLFM+RV + G WSLF P
Sbjct: 457 KGAVCAYLETWHADIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWSLFSP 516
Query: 354 SDASGLADSWGIEFEHLYSQYEEEG-RAKMVISAR----KLWFEILNSQIETGTPYMLFK 408
S+ L D +G FE Y+ YE G R ++ + R LW ++L ETG P++ FK
Sbjct: 517 SETPDLHDLYGQAFEKAYTAYEARGARGELKVYKRIPALSLWRKMLTMLFETGHPWVTFK 576
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D CN +S QQ++G + SSNLCTEI ++ +E AVCNL S+ L +++E G
Sbjct: 577 DPCNIRSPQQHMGVVHSSNLCTEITLNTNDDEIAVCNLGSVNLSAHLKEDGS-------- 628
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
D ++L + L+ +ID+N YP++ R SNL+HRP+G+GI G
Sbjct: 629 -----------LDADKLQRTIRTALRMLDNVIDINFYPVKKARNSNLKHRPVGMGIMGFQ 677
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D + +P+ S A + + E + Y A AS ELA + G Y +Y GS +G+L D
Sbjct: 678 DCLHIKRVPYGSNAAVEFADESMEMVAYFAYLASTELAEERGRYPSYSGSLWDRGVLPHD 737
Query: 589 MWNITP-----------SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
N+ ++R DW+ LRE I ++G+RNS +A PTA+ + I+G + E
Sbjct: 738 SINLLAAERGGYLEVDRTERMDWNKLRERIKQHGMRNSNCLAIAPTATIANIIGVSASIE 797
Query: 638 PYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKA 697
P N++ + LSGEF V N++L++DL GLW + + Y +GS+ +I +P ELKA
Sbjct: 798 PTYQNLFVKSNLSGEFTVTNEYLVRDLKAAGLWDEVMVADLKYFDGSLGQIDRVPAELKA 857
Query: 698 IYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYY 757
IY T +E+ K LV+ A+ R +IDQ+QSLN++M KL L+ +AW +G+KT YY
Sbjct: 858 IYATAFEVDPKWLVEAASRRQKWIDQAQSLNLYMAGASGKKLDELYKHAWLRGLKT-TYY 916
Query: 758 LRTRAAADAIKFTVDTSVLN-----NEKANRADNDVEANLAQVVCSLKNQEECMAC 808
LRT AA A K T LN + A A D CS+ N +C +C
Sbjct: 917 LRTLAATSAEKSTGRGGELNAVSSQAQTAPAAAVDNTPATDAKFCSIDN-PDCESC 971
>gi|397664228|ref|YP_006505766.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Legionella pneumophila subsp. pneumophila]
gi|395127639|emb|CCD05838.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Legionella pneumophila subsp. pneumophila]
Length = 942
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 323/833 (38%), Positives = 460/833 (55%), Gaps = 70/833 (8%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G +P+ D++ +K+ LS +PV+ + +Y + + +A A
Sbjct: 148 NGEVQPLDMDRVNTIVKESCRDLSNVKAEPVI--KDALRNLYNQAKYEDVHKALIMSARA 205
Query: 67 MTVNHPDYALLAGRV--------AVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
+ P+Y ++ R+ A++ L+ ++ +F E + +Y Y K ++ +A
Sbjct: 206 LVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDE-MAQIYPVYFKSYIEQG--IAQ 262
Query: 119 DVYEIIMKNAAC--LDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSV 176
+ + M + L A++ +RD F Y +TL Y + E PQ MRV++
Sbjct: 263 GMLDPKMTDFDLDKLSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYELPQAFFMRVAM 322
Query: 177 GI-----HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGI 231
G+ HK++ A++ Y L+S + +TPTLFN+GT +PQLSSC+L + D ++GI
Sbjct: 323 GLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYLTTVPD-HLDGI 379
Query: 232 YDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGG 291
Y +K A++SK AGG+G +RA G++I GTNG S G+VP L V + TA V+QGG
Sbjct: 380 YSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVADATAVAVNQGG- 438
Query: 292 KRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLF 351
KRKGA YLE WH D+ EFL+LRKN G + R D+ ALWVPDLFM+RVR+DG W+LF
Sbjct: 439 KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMKRVREDGNWTLF 498
Query: 352 CPSDASGLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETGTPYML 406
P + L D +G FE LY +YEE+ R ++ ISA KLW +L+ ETG P++
Sbjct: 499 SPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTISAVKLWRRMLSMLFETGHPWLT 558
Query: 407 FKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNV 466
FKD CN +S QQ+ G I SSNLCTEI +S EE AVCNL SI LP ++
Sbjct: 559 FKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSINLPAHI----------- 607
Query: 467 SKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQG 526
KN D ++L L+ +ID+N+Y + R SNL+HRPIG+GI G
Sbjct: 608 ---------KNGKLDEQKLKRTISTAVRMLDNVIDINYYSVPQARNSNLQHRPIGLGIMG 658
Query: 527 LADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQ 586
D L + + S EA + E I Y+A++AS +LA + G Y TY GS SKGIL
Sbjct: 659 FQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTYEGSLWSKGILP 718
Query: 587 VDMWNITP-----------SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
+D N+ S + DW LR + G+RNS ++A PTA+ S I G ++
Sbjct: 719 IDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTATISNICGVSQS 778
Query: 636 FEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEEL 695
EP N+Y + LSGEF VVN +L+ DL L LW + + Y NGSV IS IPEEL
Sbjct: 779 IEPTYQNLYVKSNLSGEFTVVNPYLVADLKTLNLWDEVMVNDLKYFNGSVQPISRIPEEL 838
Query: 696 KAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
K Y T +EI LV+ A+ R +IDQ+QSLNI+M QP KL L+ +AW +G+KT
Sbjct: 839 KRRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYMHAWIRGLKT-T 897
Query: 756 YYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
YYLR+ A++A K TV LN K D + +A CS+ + +C AC
Sbjct: 898 YYLRSLGASNAEKSTVTDGALNAVKL--IDTEPKA------CSITD-PDCEAC 941
>gi|350545920|ref|ZP_08915360.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Candidatus Burkholderia kirkii UZHbot1]
gi|350526296|emb|CCD40808.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Candidatus Burkholderia kirkii UZHbot1]
Length = 1013
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 313/769 (40%), Positives = 437/769 (56%), Gaps = 49/769 (6%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK----- 88
DP+ VA+ V +Y GV +Q+ + A A M P Y+ + R+ + + +
Sbjct: 193 ADPI-VAETV-KNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEG 250
Query: 89 -ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFG 147
+ + E + + + KR G +A L+ D + + +K L A+ +RD F Y G
Sbjct: 251 EVPQAEMGERYAEYFPLFIKR-GVEAGLLDDKLQQFDLKR---LGTALDTNRDLQFGYLG 306
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPT 204
+TL Y L +D +E PQ MRV++G+ ++ D A++ Y ++S F +TPT
Sbjct: 307 LQTLYDRYFLHVDGTRIELPQAFFMRVAMGLSLNEIDREARAIEFYQVLSSFDFMSSTPT 366
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I G
Sbjct: 367 LFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKG 425
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 426 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRR 484
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAK 381
D+ A W+PDLFM+RV + G W+LF PS L D +G +FE Y+ YEE+ G K
Sbjct: 485 THDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDLFGADFEKAYTAYEEKAARGEIK 544
Query: 382 MV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPE 439
+ I A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S
Sbjct: 545 LFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDT 604
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
E AVCNL S+ L V+ +V DS L D +L + L+ +
Sbjct: 605 EIAVCNLGSVNL--------------VAHIVEQADSTYAL-DHAKLKRTISVAMRMLDNV 649
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
ID+N+Y + R SNLRHRP+G+GI G D LL P+ S EA + E + Y+A
Sbjct: 650 IDINYYAVPKARNSNLRHRPVGMGIMGFQDCLYLLRTPYASAEAVEFADRSMEAVCYYAY 709
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMIS 608
AS ELA + G Y +Y GS +GIL D + R DW +LR IS
Sbjct: 710 YASTELAEERGRYSSYRGSLWDRGILPQDSLKLLAEARGGYVEVDTSASMDWPALRSRIS 769
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL G
Sbjct: 770 TYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARG 829
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LW + + + Y +G++S+I IP +L+AIY T +E+ K LV+ AA R +IDQ+QSLN
Sbjct: 830 LWDEVMVSDLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAAAHRQKWIDQAQSLN 889
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
I+M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 890 IYMAGASGKKLDEVYKLAWIRGLKT-TYYLRTMAATHVEKSTVAHGALN 937
>gi|91785258|ref|YP_560464.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
xenovorans LB400]
gi|91689212|gb|ABE32412.1| Ribonucleoside-diphosphate reductase [Burkholderia xenovorans
LB400]
Length = 1001
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 304/769 (39%), Positives = 437/769 (56%), Gaps = 49/769 (6%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK----- 88
DP++ + +Y GV +Q+ + A A M P Y+ + R+ + + +
Sbjct: 184 ADPIIA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEE 241
Query: 89 -ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFG 147
+T+ E + + + KR G +A L+ D + + +K L A+ +RD F Y G
Sbjct: 242 EVTQTEMGERYAEYFPQFIKR-GVQAELLDDKLLQFDLKR---LGAALDNNRDLQFGYLG 297
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPT 204
+TL Y L D +E PQ MRV++G+ ++ D A++ Y+++S F +TPT
Sbjct: 298 LQTLYDRYFLHHDGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSTFDFMSSTPT 357
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I G
Sbjct: 358 LFNSGTRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKG 416
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 417 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 475
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAK 381
D+ A W+PDLFM+RV + G W+LF PS L D +G EFE Y+ YE++ G K
Sbjct: 476 THDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFETAYTAYEDKVARGEIK 535
Query: 382 MV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPE 439
+ I A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S
Sbjct: 536 LFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDA 595
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
E AVCNL S+ L +++E+ + D ++L + L+ +
Sbjct: 596 EIAVCNLGSVNLVAHLKEQA---------------DGTLVLDHDKLKRTVSVAMRMLDNV 640
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
ID+N+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A
Sbjct: 641 IDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVRFADTSMEAVCYYAY 700
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVD-----------MWNITPSDRWDWSSLREMIS 608
AS ELA + G Y +Y GS +GIL D + S+ DW+ LR I+
Sbjct: 701 YASTELAQERGRYSSYRGSLWDRGILPQDSVKLLAEARGGYVEVDSSESMDWTELRSRIA 760
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
+ G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL G
Sbjct: 761 QYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARG 820
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LW + + Y +G++S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLN
Sbjct: 821 LWDEVMVADLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLN 880
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
I+M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 881 IYMGGASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGALN 928
>gi|365857691|ref|ZP_09397679.1| ribonucleoside-diphosphate reductase, alpha subunit
[Acetobacteraceae bacterium AT-5844]
gi|363715878|gb|EHL99300.1| ribonucleoside-diphosphate reductase, alpha subunit
[Acetobacteraceae bacterium AT-5844]
Length = 947
Score = 537 bits (1383), Expect = e-149, Method: Compositional matrix adjust.
Identities = 324/840 (38%), Positives = 461/840 (54%), Gaps = 61/840 (7%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+ V +DG P+ + + + GL+ +PVL + +Y G+++ +L +
Sbjct: 136 LQVKSKDGTLRPLDGAVLQRLVTEACEGLADVFPEPVLTEAR--RNLYDGISSEELSQAL 193
Query: 61 AETAAAMTVNHPDYALLAGRV--------AVSNLHKITKNSFSETIKDMYNYYNKRSGK- 111
A + P+YA ++ R+ A + I + +E +Y+ GK
Sbjct: 194 ILAARTLIEQEPNYAYVSARLLLAVARREATGFVQGIAVQTQAEMATAYPDYFTAYVGKG 253
Query: 112 -KASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHM 170
+A L+ E+ + A L A+ +RD F Y GF+TL YLL+ E PQ
Sbjct: 254 IEAQLLNP---ELARFDLARLGAALKPERDLQFQYLGFQTLYDRYLLQTQGVRFEMPQAF 310
Query: 171 LMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDS 227
MRV++G+ ++ D A++ Y L+S F +TPTLFN+GT QLSSCFL + DD
Sbjct: 311 FMRVAMGLALNEIDREERAIEFYDLISSFDFMCSTPTLFNSGTRHSQLSSCFLTSVPDD- 369
Query: 228 IEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVD 287
++GI+ +K A+++K +GGIG S +R G++I GTNG S G+VP L+V NDTA V+
Sbjct: 370 LDGIFGAIKDNALLAKYSGGIGNSWTRVRGLGAHIRGTNGQSQGVVPFLKVANDTAIAVN 429
Query: 288 QGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGK 347
QGG KRKGA YLE WH D+ EFLDLRKN G + R D+ A WVPDLFM+RV DG+
Sbjct: 430 QGG-KRKGAVCAYLETWHIDVEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMQRVEADGE 488
Query: 348 WSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETGT 402
W+LF P + L + +GI F+ Y +YE + +A + + A LW +L ETG
Sbjct: 489 WTLFSPDEVPDLHNLYGIPFKEAYERYEAKAKAGEIKVHKTVRAVDLWRRMLTMLFETGH 548
Query: 403 PYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPV 462
P+M FKD CN +S Q++ G + SSNLCTEI +S E AVCNL SI L R+V EKG+
Sbjct: 549 PWMTFKDPCNLRSPQRHAGVVHSSNLCTEITLNTSDSEVAVCNLGSINLGRHVTEKGL-- 606
Query: 463 QSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGI 522
D ERLA + L+ +IDVN Y I RRSNLRHRPIG+
Sbjct: 607 ------------------DRERLARTVRTAMRMLDNVIDVNFYTIPQARRSNLRHRPIGM 648
Query: 523 GIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSK 582
G+ G D L LP S EA + + E I Y+A++AS +LA + G Y ++ GS S+
Sbjct: 649 GLMGFQDALHALRLPLASEEAVRFADESMEVISYYAIEASVDLAAERGAYASFQGSLWSQ 708
Query: 583 GILQVDMWNITPSDR---------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNN 633
G+L VD R DW SLRE + G+RNS +A PTA+ S I+G
Sbjct: 709 GVLPVDSIRYVAEARGETLDQSTTMDWESLRERVKTIGMRNSNTMAIAPTATISNIVGAT 768
Query: 634 ECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPE 693
+ EP N+Y + +SG+F VVN L+ DL GLW + + + Y +GS+ I IP+
Sbjct: 769 QSIEPTFRNLYVKANMSGDFTVVNPALVADLKARGLWDAVMVSDLKYYDGSLGPIDRIPD 828
Query: 694 ELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKT 753
+LK +Y T +E+ LV+ AA R +IDQ+QSLN+++ P+ KL +L+ AW +G+KT
Sbjct: 829 DLKDLYATAFEVDASWLVEAAARRQKWIDQAQSLNLYLANPNGRKLDALYRLAWKRGLKT 888
Query: 754 GMYYLRTRAAADAIKFTVDTS--VLNNEK-ANRADNDVEANL--AQVVCSLKNQEECMAC 808
YYLRT++A K T+ S LN K A + ++ EA A VC L + C AC
Sbjct: 889 -TYYLRTQSATHVEKSTLKKSDGKLNAVKVAPQPESAFEATPLDAPKVCML-DDPTCEAC 946
>gi|385208004|ref|ZP_10034872.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. Ch1-1]
gi|385180342|gb|EIF29618.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. Ch1-1]
Length = 1001
Score = 537 bits (1383), Expect = e-149, Method: Compositional matrix adjust.
Identities = 304/769 (39%), Positives = 436/769 (56%), Gaps = 49/769 (6%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK----- 88
DP++ + +Y GV +Q+ + A A M P Y+ + R+ + + +
Sbjct: 184 ADPIIA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEE 241
Query: 89 -ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFG 147
+T+ E + + + KR G +A L+ D + + +K L A+ +RD F Y G
Sbjct: 242 EVTQTEMGERYAEYFPQFIKR-GVQAELLDDKLLQFDLKR---LGAALDNNRDLQFGYLG 297
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPT 204
+TL Y L D +E PQ MRV++G+ ++ D A++ Y+++S F +TPT
Sbjct: 298 LQTLYDRYFLHHDGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSTFDFMSSTPT 357
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I G
Sbjct: 358 LFNSGTRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKG 416
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 417 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 475
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAK 381
D+ A W+PDLFM+RV + G W+LF PS L D +G EFE Y+ YE++ G K
Sbjct: 476 THDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEKAYTAYEDKVARGEIK 535
Query: 382 MV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPE 439
+ I A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S
Sbjct: 536 LFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDA 595
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
E AVCNL S+ L +++E+ + D ++L + L+ +
Sbjct: 596 EIAVCNLGSVNLVAHLKEQA---------------DGTLVLDHDKLKRTVSVAMRMLDNV 640
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
ID+N+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A
Sbjct: 641 IDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAY 700
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVD-----------MWNITPSDRWDWSSLREMIS 608
AS ELA + G Y +Y GS +GIL D + S+ DW+ LR I+
Sbjct: 701 YASTELAQERGRYSSYRGSLWDRGILPQDSVKLLAEARGGYVEVDSSESMDWTELRSRIA 760
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL G
Sbjct: 761 TYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARG 820
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LW + + Y +G++S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLN
Sbjct: 821 LWDEVMVADLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLN 880
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
I+M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 881 IYMGGASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGALN 928
>gi|54297687|ref|YP_124056.1| ribonucleotide-diphosphate reductase subunit alpha [Legionella
pneumophila str. Paris]
gi|53751472|emb|CAH12890.1| hypothetical protein lpp1738 [Legionella pneumophila str. Paris]
Length = 942
Score = 537 bits (1383), Expect = e-149, Method: Compositional matrix adjust.
Identities = 322/833 (38%), Positives = 460/833 (55%), Gaps = 70/833 (8%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G +P+ D++ +K+ LS +PV+ + +Y + + +A A
Sbjct: 148 NGEVQPLDMDRVNTIVKESCRDLSNVKAEPVI--KDALRNLYNQAKYEDVHKALIMSARA 205
Query: 67 MTVNHPDYALLAGRV--------AVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
+ P+Y ++ R+ A++ L+ ++ +F E + +Y Y K ++ +A
Sbjct: 206 LVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDE-MAQIYPVYFKSYIEQG--IAQ 262
Query: 119 DVYEIIMKNAAC--LDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSV 176
+ + M + L A++ +RD F Y +TL Y + E PQ MRV++
Sbjct: 263 GMLDPKMADFDLDKLSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYELPQAFFMRVAM 322
Query: 177 GI-----HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGI 231
G+ HK++ A++ Y L+S + +TPTLFN+GT +PQLSSC+L + D ++GI
Sbjct: 323 GLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYLTTVPD-HLDGI 379
Query: 232 YDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGG 291
Y +K A++SK AGG+G +RA G++I GTNG S G+VP L V + TA V+QGG
Sbjct: 380 YSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVADATAVAVNQGG- 438
Query: 292 KRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLF 351
KRKGA YLE WH D+ EFL+LRKN G + R D+ ALWVPDLFM+RVR+DG W+LF
Sbjct: 439 KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMKRVREDGNWTLF 498
Query: 352 CPSDASGLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETGTPYML 406
P + L D +G FE LY +YEE+ R ++ ISA KLW +L+ ETG P++
Sbjct: 499 SPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTISAVKLWRRMLSMLFETGHPWLT 558
Query: 407 FKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNV 466
FKD CN +S QQ+ G I SSNLCTEI +S EE AVCNL S+ LP ++
Sbjct: 559 FKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSVNLPAHI----------- 607
Query: 467 SKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQG 526
KN D ++L L+ +ID+N+Y + R SNL+HRPIG+GI G
Sbjct: 608 ---------KNGKLDEQKLKRTISTAVRMLDNVIDINYYSVPQARNSNLQHRPIGLGIMG 658
Query: 527 LADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQ 586
D L + + S EA + E I Y+A++AS +LA + G Y TY GS SKGIL
Sbjct: 659 FQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTYEGSLWSKGILP 718
Query: 587 VDMWNITP-----------SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
+D N+ S + DW LR + G+RNS ++A PTA+ S I G ++
Sbjct: 719 IDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTATISNICGVSQS 778
Query: 636 FEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEEL 695
EP N+Y + LSGEF VVN +L+ DL L LW + + Y NGSV IS IPEEL
Sbjct: 779 IEPTYQNLYVKSNLSGEFTVVNPYLVADLKTLNLWDEVMVNDLKYFNGSVQPISRIPEEL 838
Query: 696 KAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
K Y T +EI LV+ A+ R +IDQ+QSLNI+M QP KL L+ +AW +G+KT
Sbjct: 839 KRRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYMHAWIRGLKT-T 897
Query: 756 YYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
YYLR+ A++A K TV LN K D + +A CS+ + +C AC
Sbjct: 898 YYLRSLGASNAEKSTVTDGALNAVKL--IDTEPKA------CSITD-PDCEAC 941
>gi|291615086|ref|YP_003525243.1| ribonucleoside-diphosphate reductase, subunit alpha [Sideroxydans
lithotrophicus ES-1]
gi|291585198|gb|ADE12856.1| ribonucleoside-diphosphate reductase, alpha subunit [Sideroxydans
lithotrophicus ES-1]
Length = 946
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 313/833 (37%), Positives = 461/833 (55%), Gaps = 51/833 (6%)
Query: 4 IKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAET 63
IK P+ +++A+++ GL D + + +Y GV ++ + A +
Sbjct: 136 IKDGDVTRPLDVVQLSAQIQSACVGLGGA-VDADKILKLTLKDLYDGVAVEEVRKCAILS 194
Query: 64 AAAMTVNHPDYALLAGRVAVSNL------HKITKNSFSETIKDMYNYYNKRSGKKASLVA 117
A + P Y+ + R+ ++N+ ++++ +E + + + KR G +A L+
Sbjct: 195 ARTLIEQDPAYSFVTARLLLNNICCEILGGQVSQADMAERYAEYFPKFIKR-GIEAELLN 253
Query: 118 DDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
+++ + A GA+ RD F+Y G +TL Y L +D + +E PQ MRV++G
Sbjct: 254 EELGHFDLDRLA---GALDSSRDLQFNYLGLQTLYDRYFLHVDGQRIELPQAFFMRVAMG 310
Query: 178 IHKDDT---DSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ ++ + A++ Y L+S F +TPTLFN+GT + QLSSC+L + DD ++GIY+
Sbjct: 311 LSLNEINREERAIEFYRLLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIYEA 369
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
LK+ A++SK AGG+G N+RA GS+I GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 370 LKENALLSKFAGGLGNDWTNVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 428
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EFL+LRKN G + R D+ + W+PDLFM+RV + G+W+LF PS
Sbjct: 429 GAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTSNWIPDLFMKRVMEGGEWTLFSPS 488
Query: 355 DASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKD 409
L D +G EFE Y+ YE + G K+ + A+ LW ++L ETG P++ FKD
Sbjct: 489 TCPDLHDKFGAEFEKAYTAYEAKVASGELKLFKKVPAQSLWRKMLTMLFETGHPWITFKD 548
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L ++ KG
Sbjct: 549 PCNIRSPQQHVGVVHSSNLCTEITLNTSDSEIAVCNLGSVNLAAHLFPKG---------- 598
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
+K D ++L L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 599 ----HAKAGQIDHDKLKRTVSTAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGFQD 654
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
L +P+ S A + E + Y+A AS +LA + G Y +Y GS KGIL D
Sbjct: 655 CLHDLRIPYSSDAAIEFADRSMEAVCYYAYWASTDLAAERGRYASYRGSLWDKGILPQDS 714
Query: 590 WNITPSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
N+ R DW +LR I +NG+RNS VA PTA+ S I+G + C EP
Sbjct: 715 LNLLLEQRGGYVEVDMSSNLDWDALRARIQQNGMRNSNCVAIAPTATISNIIGVSACIEP 774
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
NI+ + LSGEF V+N HL+ DL LGLW + + Y +GS++KI IP EL+ +
Sbjct: 775 TYQNIFVKSNLSGEFTVINDHLVNDLKALGLWDEVMIADLKYFDGSLAKIDRIPAELREL 834
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +E++ K L++ A+ R +IDQ+QSLNI+M KL + AW +G+KT YYL
Sbjct: 835 YATAFEVEPKWLIEAASRRQKWIDQAQSLNIYMSGVSGRKLDETYKLAWLRGLKT-TYYL 893
Query: 759 RTRAAADAIKFTVDTSVLNNEKANRADNDVEANLA---QVVCSLKNQEECMAC 808
R A A K T LN + ++ A+ CS+ N EC AC
Sbjct: 894 RALGATSAEKSTSRAGSLNAVSSGGGAGEMSASPVVEEAKFCSIDN-PECEAC 945
>gi|88705572|ref|ZP_01103282.1| ribonucleoside-diphosphate reductase, alpha subunit [Congregibacter
litoralis KT71]
gi|88700085|gb|EAQ97194.1| ribonucleoside-diphosphate reductase, alpha subunit [Congregibacter
litoralis KT71]
Length = 969
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 317/837 (37%), Positives = 456/837 (54%), Gaps = 64/837 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V++ DG K P+ +++ + + GL + + + +Y GV+ +L
Sbjct: 165 VVQLDGSKAPLDLERLHIIVSEACAGL--DDVSETRILDEALRNLYDGVSMQELSTSLVI 222
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSF-----SETIKDMYNYYNKR------SGK 111
TA + P+Y + R+ NL + SF S T DM Y K G
Sbjct: 223 TARTLIEQEPNYTYASARLLCDNL-RTEALSFLGVADSATQGDMDRLYAKALPAYIARGV 281
Query: 112 KASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHML 171
+ L+ + E ++ + AI+ +RD F Y G +TL Y + D E PQ
Sbjct: 282 ELELLDPTLAEYDLER---MGKAILPERDLQFTYLGLQTLYDRYFIHSDEVRFELPQIFF 338
Query: 172 MRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSI 228
MRV++G+ ++TD A++ Y L+S + +TPTLFNAGT +PQLSSC+L + DD +
Sbjct: 339 MRVAMGLAVEETDREARAIEFYRLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-L 397
Query: 229 EGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQ 288
GIY ++ A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+Q
Sbjct: 398 HGIYGAIQDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQ 457
Query: 289 GGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKW 348
GG KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDG W
Sbjct: 458 GG-KRKGAVCSYLETWHMDIEEFVELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGDW 516
Query: 349 SLFCPSDASGLADSWGIEFEHLYSQYEE-----EGRAKMVISARKLWFEILNSQIETGTP 403
+LF P+D L D +G FE Y YE E + + A+ LW ++L ETG P
Sbjct: 517 TLFSPNDVPDLHDLYGKAFEERYCAYEAMAATGELKYSKTVKAQNLWRKMLGMLFETGHP 576
Query: 404 YMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQ 463
+M FKD CN +S QQ+ G + SSNLCTEI +S +E AVCNL SI LP++V E G+
Sbjct: 577 WMTFKDPCNLRSPQQHAGVVHSSNLCTEITLNTSADEIAVCNLGSINLPQHVDENGL--- 633
Query: 464 SNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIG 523
+ E+LAE + L+ +ID+N+Y ++T R SN RHRP+G+G
Sbjct: 634 -----------------NLEKLAETVRTAVRMLDNVIDINYYSVDTARNSNFRHRPVGLG 676
Query: 524 IQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKG 583
+ G D + + S +A E I Y+A+ AS++LA + G YE+Y GS S+G
Sbjct: 677 LMGFQDALYKQHIAYGSEDAVTFADRSMEAISYYAIDASSKLAEERGAYESYEGSLWSQG 736
Query: 584 ILQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILG 631
IL +D +R DW+SLRE + G+RNS ++A PTA+ + I G
Sbjct: 737 ILPIDSLGKLVEERGSDYIKVDDSMTMDWTSLREAVKARGMRNSNVMAIAPTATIANITG 796
Query: 632 NNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEI 691
++ EP N+Y + LSGEF VVN +L+ DL GLW + + Y +GSV I I
Sbjct: 797 VSQSIEPTYQNLYVKSNLSGEFTVVNPYLVNDLKVRGLWDSVMVNDLKYYDGSVQAIERI 856
Query: 692 PEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGM 751
P +L+AIY +E++ + +V+ A+ R +IDQ+QSLN+++ KL + AW G+
Sbjct: 857 PADLRAIYSNAFEVEPRWIVECASRRQKWIDQAQSLNLYINNASGKKLDITYRMAWYSGL 916
Query: 752 KTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
KT YYLR+ AA K T+DT LN A +++ + CSL + +C AC
Sbjct: 917 KT-TYYLRSLAATGTEKSTIDTGQLN---AVSSESAPAPAPVPMACSL-DDPDCEAC 968
>gi|54294661|ref|YP_127076.1| ribonucleotide-diphosphate reductase subunit alpha [Legionella
pneumophila str. Lens]
gi|53754493|emb|CAH15977.1| hypothetical protein lpl1738 [Legionella pneumophila str. Lens]
Length = 942
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 322/833 (38%), Positives = 460/833 (55%), Gaps = 70/833 (8%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G +P+ D++ +K+ LS +PV+ + +Y + + +A A
Sbjct: 148 NGEVQPLDMDRVNTIVKESCRDLSNVKAEPVI--KDALRNLYNQAKYEDVHKALIMSARA 205
Query: 67 MTVNHPDYALLAGRV--------AVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
+ P+Y ++ R+ A++ L+ ++ +F E + +Y Y K ++ +A
Sbjct: 206 LVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDE-MAQIYPVYFKSYIEQG--IAQ 262
Query: 119 DVYEIIMKNAAC--LDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSV 176
+ + M + L A++ +RD F Y +TL Y + E PQ MRV++
Sbjct: 263 GMLDPKMTDFDLDKLSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYELPQAFFMRVAM 322
Query: 177 GI-----HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGI 231
G+ HK++ A++ Y L+S + +TPTLFN+GT +PQLSSC+L + D ++GI
Sbjct: 323 GLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYLTTVPD-HLDGI 379
Query: 232 YDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGG 291
Y +K A++SK AGG+G +RA G++I GTNG S G+VP L V + TA V+QGG
Sbjct: 380 YSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVADATAVAVNQGG- 438
Query: 292 KRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLF 351
KRKGA YLE WH D+ EFL+LRKN G + R D+ ALWVPDLFM+RVR+DG W+LF
Sbjct: 439 KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMKRVREDGNWTLF 498
Query: 352 CPSDASGLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETGTPYML 406
P + L D +G FE LY +YEE+ R ++ I A KLW +L+ ETG P++
Sbjct: 499 SPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTIPAVKLWRRMLSMLFETGHPWLT 558
Query: 407 FKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNV 466
FKD CN +S QQ+ G I SSNLCTEI +S EE AVCNL SI LP ++
Sbjct: 559 FKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSINLPAHI----------- 607
Query: 467 SKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQG 526
KN D ++L L+ +ID+N+Y + R SNL+HRPIG+GI G
Sbjct: 608 ---------KNGKLDEQKLKRTISTAIRMLDNVIDINYYSVPQARNSNLQHRPIGLGIMG 658
Query: 527 LADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQ 586
D L + + S EA + E I Y+A++AS +LA + G Y TY GS SKGIL
Sbjct: 659 FQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTYEGSLWSKGILP 718
Query: 587 VDMWNITP-----------SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
+D N+ S + DW LR + G+RNS ++A PTA+ S I G ++
Sbjct: 719 IDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTATISNICGVSQS 778
Query: 636 FEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEEL 695
EP N+Y + LSGEF VVN +L+ DL L LW + + Y NGSV IS IPEEL
Sbjct: 779 IEPTYQNLYVKSNLSGEFTVVNPYLVADLKTLNLWDEVMVNDLKYFNGSVQPISRIPEEL 838
Query: 696 KAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
K+ Y T +EI LV+ A+ R +IDQ+QSLNI+M QP KL L+ +AW +G+KT
Sbjct: 839 KSRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYMHAWIRGLKT-T 897
Query: 756 YYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
YYLR+ A++A K TV LN K D + +A CS+ + +C AC
Sbjct: 898 YYLRSLGASNAEKSTVTDGALNAVKL--IDTEPKA------CSITD-PDCEAC 941
>gi|307731038|ref|YP_003908262.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
sp. CCGE1003]
gi|307585573|gb|ADN58971.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. CCGE1003]
Length = 1000
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 305/765 (39%), Positives = 436/765 (56%), Gaps = 48/765 (6%)
Query: 38 LVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------ITK 91
+VA+ V +Y GV +Q+ + A A M P Y+ + R+ + + + +T+
Sbjct: 187 IVAETV-KNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQ 245
Query: 92 NSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTL 151
E + + + KR G +A L+ D + + +K L A+ +RD F Y G +TL
Sbjct: 246 AEMGERYAEYFPQFIKR-GVQAELLDDKLLQFDLKR---LGAALDANRDLQFGYLGLQTL 301
Query: 152 ERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNA 208
Y L D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLFN+
Sbjct: 302 YDRYFLHHDGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNS 361
Query: 209 GTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGS 268
GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I GTNG
Sbjct: 362 GTRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGK 420
Query: 269 SNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDL 328
S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+
Sbjct: 421 SQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDM 479
Query: 329 FYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV-- 383
A W+PDLFM+RV + G W+LF PS L D +G EFE Y+ YE++ G K+
Sbjct: 480 NTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKK 539
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAV 443
I A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E AV
Sbjct: 540 IPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAV 599
Query: 444 CNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVN 503
CNL S+ L +++E+ D ++L + L+ +ID+N
Sbjct: 600 CNLGSVNLVAHLKEQA---------------DGTLALDHDKLKRTISVAMRMLDNVIDIN 644
Query: 504 HYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASA 563
+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A AS
Sbjct: 645 YYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAYYAST 704
Query: 564 ELAVKDGPYETYFGSPMSKGILQVD-----------MWNITPSDRWDWSSLREMISKNGV 612
ELA + G Y +Y GS +GIL D + S+ DWS LR+ I+ G+
Sbjct: 705 ELAEERGRYSSYRGSLWDRGILPQDSVKLLAEARGGYVEVDSSESMDWSELRQRIATYGM 764
Query: 613 RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSH 672
RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL GLW
Sbjct: 765 RNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDE 824
Query: 673 ALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHME 732
+ + Y +G++S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLNI+M
Sbjct: 825 VMVADLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMA 884
Query: 733 QPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 885 GASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGALN 928
>gi|254253305|ref|ZP_04946623.1| Ribonucleotide reductase alpha subunit [Burkholderia dolosa AUO158]
gi|124895914|gb|EAY69794.1| Ribonucleotide reductase alpha subunit [Burkholderia dolosa AUO158]
Length = 997
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 315/798 (39%), Positives = 446/798 (55%), Gaps = 52/798 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G P+ + + A + GL +P + + +Y GV +Q+ + A A
Sbjct: 161 NGVTRPLDLNALRALIVSACDGLGAA-VNPEPIVAETVKNLYDGVPMSQVYDSAILAART 219
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVAD 118
M P Y+ + R+ LH I + E + +M Y + R G +A L+ D
Sbjct: 220 MIEKDPAYSQVTARIL---LHTIRREILGEEVVQSEMSTRYAEYFPQFLRRGVEAGLLDD 276
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + +K L A+ +RD F Y G +TL Y L +D +E PQ MRV++G+
Sbjct: 277 KLLQFDLKR---LGEALDANRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGL 333
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+ L
Sbjct: 334 SLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEAL 392
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 393 KENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 451
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + W+LF PS
Sbjct: 452 AVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPST 511
Query: 356 ASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G EFE Y+ YEE+ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 512 CPDLHDKFGAEFEAAYTAYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDP 571
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ LV
Sbjct: 572 CNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHLV 617
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 618 KQPDGSYAL-DHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDC 676
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 677 LHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTL 736
Query: 591 NITP-----------SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ S+ DW++LR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 737 KLLAEARGGYVEVDMSETLDWAALRARIATHGMRNSNCVAIAPTATISNIIGVSACIEPT 796
Query: 640 TSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AIY
Sbjct: 797 FQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIY 856
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
T +E+ K LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G KT YYLR
Sbjct: 857 ATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGKKT-TYYLR 915
Query: 760 TRAAADAIKFTVDTSVLN 777
T AA K TV LN
Sbjct: 916 TMAATHVEKSTVAHGALN 933
>gi|148359318|ref|YP_001250525.1| ribonucleoside-diphosphate reductase subunit alpha [Legionella
pneumophila str. Corby]
gi|148281091|gb|ABQ55179.1| ribonucleoside-diphosphate reductase, alpha subunit [Legionella
pneumophila str. Corby]
Length = 917
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 322/833 (38%), Positives = 460/833 (55%), Gaps = 70/833 (8%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G +P+ D++ +K+ LS +PV+ + +Y + + +A A
Sbjct: 123 NGEVQPLDMDRVNTIVKESCRDLSNVKAEPVI--KDALRNLYNQAKYEDVHKALIMSARA 180
Query: 67 MTVNHPDYALLAGRV--------AVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
+ P+Y ++ R+ A++ L+ ++ +F E + +Y Y K ++ +A
Sbjct: 181 LVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDE-MAQIYPVYFKSYIEQG--IAQ 237
Query: 119 DVYEIIMKNAAC--LDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSV 176
+ + M + L A++ +RD F Y +TL Y + E PQ MRV++
Sbjct: 238 GMLDPKMADFDLDKLSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYELPQAFFMRVAM 297
Query: 177 GI-----HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGI 231
G+ HK++ A++ Y L+S + +TPTLFN+GT +PQLSSC+L + D ++GI
Sbjct: 298 GLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYLTTVPD-HLDGI 354
Query: 232 YDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGG 291
Y +K A++SK AGG+G +RA G++I GTNG S G+VP L V + TA V+QGG
Sbjct: 355 YSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVADATAVAVNQGG- 413
Query: 292 KRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLF 351
KRKGA YLE WH D+ EFL+LRKN G + R D+ ALWVPDLFM+RVR+DG W+LF
Sbjct: 414 KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMKRVREDGNWTLF 473
Query: 352 CPSDASGLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETGTPYML 406
P + L D +G FE LY +YEE+ R ++ ISA KLW +L+ ETG P++
Sbjct: 474 SPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTISAVKLWRRMLSMLFETGHPWLT 533
Query: 407 FKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNV 466
FKD CN +S QQ+ G I SSNLCTEI +S EE AVCNL SI LP ++
Sbjct: 534 FKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSINLPAHI----------- 582
Query: 467 SKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQG 526
KN D ++L L+ +ID+N+Y + R SNL+HRPIG+GI G
Sbjct: 583 ---------KNGKLDEQKLKRTISTAVRMLDNVIDINYYSVPQARNSNLQHRPIGLGIMG 633
Query: 527 LADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQ 586
D L + + S EA + E I Y+A++AS +LA + G Y TY GS SKGIL
Sbjct: 634 FQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTYEGSLWSKGILP 693
Query: 587 VDMWNITP-----------SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
+D N+ S + DW LR + G+RNS ++A PTA+ S I G ++
Sbjct: 694 IDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTATISNICGVSQS 753
Query: 636 FEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEEL 695
EP N+Y + LSGEF VVN +L+ DL L LW + + Y NGSV IS IP+EL
Sbjct: 754 IEPTYQNLYVKSNLSGEFTVVNPYLVADLKALNLWDEVMVNDLKYFNGSVQPISRIPDEL 813
Query: 696 KAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
K Y T +EI LV+ A+ R +IDQ+QSLNI+M QP KL L+ +AW +G+KT
Sbjct: 814 KRRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYMHAWIRGLKT-T 872
Query: 756 YYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
YYLR+ A++A K TV LN K D + +A CS+ + +C AC
Sbjct: 873 YYLRSLGASNAEKSTVTDGALNAVKL--IDTEPKA------CSITD-PDCEAC 916
>gi|397667501|ref|YP_006509038.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Legionella pneumophila subsp. pneumophila]
gi|395130912|emb|CCD09161.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Legionella pneumophila subsp. pneumophila]
Length = 942
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 321/833 (38%), Positives = 460/833 (55%), Gaps = 70/833 (8%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G +P+ D++ +K+ LS +PV+ + +Y + + +A A
Sbjct: 148 NGEVQPLDMDRVNTIVKESCRNLSNVKAEPVI--KDALRNLYNQAKYEDVHKALIMSARA 205
Query: 67 MTVNHPDYALLAGRV--------AVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
+ P+Y ++ R+ A++ L+ ++ +F E + +Y Y K ++ +A
Sbjct: 206 LVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDE-MAQIYPVYFKSYIEQG--IAQ 262
Query: 119 DVYEIIMKNAAC--LDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSV 176
+ + M + L A++ +RD F Y +TL Y + E PQ MRV++
Sbjct: 263 GMLDPKMADFDLDKLSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYELPQAFFMRVAM 322
Query: 177 GI-----HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGI 231
G+ HK++ A++ Y L+S + +TPTLFN+GT +PQLSSC+L + D ++GI
Sbjct: 323 GLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYLTTVPD-HLDGI 379
Query: 232 YDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGG 291
Y +K A++SK AGG+G +RA G++I GTNG S G+VP L V + TA V+QGG
Sbjct: 380 YSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVADATAVAVNQGG- 438
Query: 292 KRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLF 351
KRKGA YLE WH D+ EFL+LRKN G + R D+ ALWVPDLFM+RVR+DG W+LF
Sbjct: 439 KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMKRVREDGNWTLF 498
Query: 352 CPSDASGLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETGTPYML 406
P + L D +G FE LY +YEE+ R ++ ISA KLW +L+ ETG P++
Sbjct: 499 SPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTISAVKLWRRMLSMLFETGHPWLT 558
Query: 407 FKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNV 466
FKD CN +S QQ+ G I SSNLCTEI +S EE AVCNL SI LP ++
Sbjct: 559 FKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSINLPAHI----------- 607
Query: 467 SKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQG 526
KN D ++L L+ +ID+N+Y + R SNL+HRP+G+GI G
Sbjct: 608 ---------KNGKLDEQKLKRTISTAVRMLDNVIDINYYSVPQARNSNLQHRPVGLGIMG 658
Query: 527 LADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQ 586
D L + + S EA + E I Y+A++AS +LA + G Y TY GS SKGIL
Sbjct: 659 FQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTYEGSLWSKGILP 718
Query: 587 VDMWNITP-----------SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
+D N+ S + DW LR + G+RNS ++A PTA+ S I G ++
Sbjct: 719 IDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTATISNICGVSQS 778
Query: 636 FEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEEL 695
EP N+Y + LSGEF VVN +L+ DL L LW + + Y NGSV IS IP+EL
Sbjct: 779 IEPTYQNLYVKSNLSGEFTVVNPYLVADLKALNLWDEVMVNDLKYFNGSVQPISRIPDEL 838
Query: 696 KAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
K Y T +EI LV+ A+ R +IDQ+QSLNI+M QP KL L+ +AW +G+KT
Sbjct: 839 KRRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYMHAWIRGLKT-T 897
Query: 756 YYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
YYLR+ A++A K TV LN K D + +A CS+ + +C AC
Sbjct: 898 YYLRSLGASNAEKSTVTDGALNAVKL--IDTEPKA------CSITD-PDCEAC 941
>gi|75677069|ref|YP_319490.1| ribonucleotide-diphosphate reductase subunit alpha [Nitrobacter
winogradskyi Nb-255]
gi|74421939|gb|ABA06138.1| ribonucleotide reductase large subunit [Nitrobacter winogradskyi
Nb-255]
Length = 969
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 310/786 (39%), Positives = 431/786 (54%), Gaps = 60/786 (7%)
Query: 17 KITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYAL 76
++TA +++ GL +L + +Y G++ +L + A + PDYA
Sbjct: 167 RLTAVVEEACAGLGDVSASAILT--ETHRNLYDGISVDELAQAPILAARTLVETDPDYAK 224
Query: 77 LAGRV------------AVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEII 124
++ R+ L + T+ +E D + Y R+G L+ ++
Sbjct: 225 VSARLLLDKMRREALSFVAGRLEQATQAEMAERYADYFLSY-VRAGIDHELLDPEIGRFD 283
Query: 125 MKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI---HKD 181
+ L A+ +RD FDY G +TL Y L + S E PQ MRV+ G+ D
Sbjct: 284 LDR---LAAALKPERDLRFDYLGLQTLYDRYFLHVRSVRFELPQAFFMRVACGLALREID 340
Query: 182 DTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAII 241
+ A+ Y L+S F +TPTLFNAGT +PQLSSCFL + DD ++GI+ +K A++
Sbjct: 341 REEKAIAFYDLLSSFDFMASTPTLFNAGTLRPQLSSCFLTTVADD-LDGIFKAIKDNALL 399
Query: 242 SKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYL 301
SK AGG+G +R G++I GTNG S G+VP L+V NDTA V+QGG KRKGA YL
Sbjct: 400 SKYAGGLGNDWTRVRGLGAHIKGTNGESQGVVPFLKVANDTAIAVNQGG-KRKGAVCAYL 458
Query: 302 EPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLAD 361
E WH DI EFLDLRKN G + R D+ A WVPDLFM+RV +DG W+LF P + L D
Sbjct: 459 ETWHIDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMQRVEEDGMWTLFSPDETPDLHD 518
Query: 362 SWGIEFEHLYSQYEE-----EGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSN 416
G F Y+ YEE E R + A LW +L ETG P++ FKD CN +S
Sbjct: 519 LTGKAFAGRYAYYEEKAARGELRVTKQVRAVDLWRRMLTMLFETGHPWITFKDPCNLRSP 578
Query: 417 QQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSK 476
QQ+ G + SSNLCTEI +S E AVCNL S+ L +++ D K
Sbjct: 579 QQHCGVVHSSNLCTEITLNTSNTEVAVCNLGSVNLVNHIK-----------------DGK 621
Query: 477 NRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGL 536
D E LA +I L+ ++DVN Y I R SNLRHRP+G+GI G D +L L
Sbjct: 622 ---LDHEHLARTVRIAMRMLDNVLDVNFYTIPEARTSNLRHRPVGLGIMGFQDALNILRL 678
Query: 537 PFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW------ 590
P+ S EA + E I YHA+ S ELA + G Y +Y GS SKG+L +D
Sbjct: 679 PYASDEAVSFADESMEAIAYHAISGSVELAAERGRYPSYQGSLWSKGVLPLDSLELVDEA 738
Query: 591 -----NITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYT 645
+I S R DW SLR+ + G+RNS +A PTA+ S I G ++ EP N+Y
Sbjct: 739 RGAEVDIDRSSRLDWDSLRQRVMTIGMRNSNCMAIAPTATISNICGVSQSIEPAYQNLYV 798
Query: 646 RRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEI 705
+ +SG+F VVN HL++DL GLW + + + Y +GSV +I +P++LKA+Y T +EI
Sbjct: 799 KSNMSGDFTVVNAHLVRDLKARGLWDEVMISDLKYFDGSVGEIDRVPDDLKALYATAFEI 858
Query: 706 KQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAAD 765
L+D AA R +IDQ+QSLN+++ P KL +L+ +AW +G+KT YYLR+R+A
Sbjct: 859 DSAWLIDAAARRQKWIDQAQSLNLYIANPSGKKLDALYRHAWKRGLKT-TYYLRSRSATH 917
Query: 766 AIKFTV 771
K T+
Sbjct: 918 VEKSTL 923
>gi|339327268|ref|YP_004686961.1| ribonucleoside-diphosphate reductase subunit alpha [Cupriavidus
necator N-1]
gi|338167425|gb|AEI78480.1| ribonucleoside-diphosphate reductase subunit alpha [Cupriavidus
necator N-1]
Length = 977
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 308/769 (40%), Positives = 437/769 (56%), Gaps = 49/769 (6%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK----- 88
+P+L ++ +Y GV TQ+ + A A + PDY+ + R+ + + K
Sbjct: 187 AEPIL--KETLKNLYDGVPMTQVYDSAILAARTLIEKDPDYSQVTARILLHTIRKEILGT 244
Query: 89 -ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFG 147
+T+ S + + + R G +A L+ + ++ + A L A+ RDF F+Y G
Sbjct: 245 EVTQAEMSSRYAEYFPKFIAR-GIQAELLDE---QLATYDLARLGAALDAGRDFQFNYLG 300
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGI---HKDDTDSALKTYHLMSQHWFTHATPT 204
+TL Y L +D +E PQ MRV++G+ KD A++ Y L+S F +TPT
Sbjct: 301 LQTLYDRYFLHIDETRIEMPQAFFMRVAMGLALNEKDREARAIEFYQLLSSFDFMSSTPT 360
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT + QLSSC+L + DD +EGIY+ LK+ A++SK AGG+G N+RA GS+I G
Sbjct: 361 LFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 419
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 420 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 478
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAK 381
D+ A W+PDLFM+RV + G+W+LF P+ L D G EFE Y YE + G K
Sbjct: 479 THDMNTANWIPDLFMKRVMEAGEWTLFSPATCPDLHDKVGKEFEKAYLGYEAKAASGELK 538
Query: 382 MV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPE 439
+ + A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI ++
Sbjct: 539 LFKKLPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNES 598
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
E AVCNL S+ L V+ + D L D +L + + L+ +
Sbjct: 599 EIAVCNLGSVNL--------------VAHMTKQADGTYAL-DHAKLQKTVRTAMRMLDNV 643
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
ID+N+Y ++ R SNLRHRP+G+GI G D +L P+ S A + E + Y+A
Sbjct: 644 IDINYYAVDKARNSNLRHRPVGMGIMGFQDCLHVLRTPYSSDAAVKFADTSMEAVCYYAY 703
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMIS 608
KAS ELA + G Y TY GS +GIL D + +R DW +LR I
Sbjct: 704 KASTELAEERGRYSTYEGSLWDRGILPQDSLKLLAEERGGYLDVDLSSTMDWDALRARIK 763
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL E G
Sbjct: 764 QHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKERG 823
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LW + + Y +GS+S+I IP++L+ IY T +E++ LV+ A+ R +IDQ+QSLN
Sbjct: 824 LWDEVMVADLKYFDGSLSRIDRIPQDLRDIYATAFEVEPTWLVEAASRRQKWIDQAQSLN 883
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
I+M KL + AW +G+KT YYLRT AA K TV LN
Sbjct: 884 IYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTVSRGSLN 931
>gi|52842001|ref|YP_095800.1| ribonucleotide-diphosphate reductase subunit alpha [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|296107365|ref|YP_003619065.1| ribonucleoside-diphosphate reductase subunit alpha [Legionella
pneumophila 2300/99 Alcoy]
gi|378777635|ref|YP_005186073.1| ribonucleoside-diphosphate reductase subunit alpha [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|52629112|gb|AAU27853.1| ribonucleoside-diphosphate reductase, alpha subunit [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|295649266|gb|ADG25113.1| ribonucleoside-diphosphate reductase alpha chain [Legionella
pneumophila 2300/99 Alcoy]
gi|307610474|emb|CBX00046.1| hypothetical protein LPW_18011 [Legionella pneumophila 130b]
gi|364508450|gb|AEW51974.1| ribonucleoside-diphosphate reductase, alpha subunit [Legionella
pneumophila subsp. pneumophila ATCC 43290]
Length = 942
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 322/833 (38%), Positives = 460/833 (55%), Gaps = 70/833 (8%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G +P+ D++ +K+ LS +PV+ + +Y + + +A A
Sbjct: 148 NGEVQPLDMDRVNTIVKESCRDLSNVKAEPVI--KDALRNLYNQAKYEDVHKALIMSARA 205
Query: 67 MTVNHPDYALLAGRV--------AVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
+ P+Y ++ R+ A++ L+ ++ +F E + +Y Y K ++ +A
Sbjct: 206 LVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDE-MAQIYPVYFKSYIEQG--IAQ 262
Query: 119 DVYEIIMKNAAC--LDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSV 176
+ + M + L A++ +RD F Y +TL Y + E PQ MRV++
Sbjct: 263 GMLDPKMADFDLDKLSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYELPQAFFMRVAM 322
Query: 177 GI-----HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGI 231
G+ HK++ A++ Y L+S + +TPTLFN+GT +PQLSSC+L + D ++GI
Sbjct: 323 GLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYLTTVPD-HLDGI 379
Query: 232 YDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGG 291
Y +K A++SK AGG+G +RA G++I GTNG S G+VP L V + TA V+QGG
Sbjct: 380 YSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVADATAVAVNQGG- 438
Query: 292 KRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLF 351
KRKGA YLE WH D+ EFL+LRKN G + R D+ ALWVPDLFM+RVR+DG W+LF
Sbjct: 439 KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMKRVREDGNWTLF 498
Query: 352 CPSDASGLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETGTPYML 406
P + L D +G FE LY +YEE+ R ++ ISA KLW +L+ ETG P++
Sbjct: 499 SPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTISAVKLWRRMLSMLFETGHPWLT 558
Query: 407 FKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNV 466
FKD CN +S QQ+ G I SSNLCTEI +S EE AVCNL SI LP ++
Sbjct: 559 FKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSINLPAHI----------- 607
Query: 467 SKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQG 526
KN D ++L L+ +ID+N+Y + R SNL+HRPIG+GI G
Sbjct: 608 ---------KNGKLDEQKLKRTISTAVRMLDNVIDINYYSVPQARNSNLQHRPIGLGIMG 658
Query: 527 LADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQ 586
D L + + S EA + E I Y+A++AS +LA + G Y TY GS SKGIL
Sbjct: 659 FQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTYEGSLWSKGILP 718
Query: 587 VDMWNITP-----------SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
+D N+ S + DW LR + G+RNS ++A PTA+ S I G ++
Sbjct: 719 IDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTATISNICGVSQS 778
Query: 636 FEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEEL 695
EP N+Y + LSGEF VVN +L+ DL L LW + + Y NGSV IS IP+EL
Sbjct: 779 IEPTYQNLYVKSNLSGEFTVVNPYLVADLKALNLWDEVMVNDLKYFNGSVQPISRIPDEL 838
Query: 696 KAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
K Y T +EI LV+ A+ R +IDQ+QSLNI+M QP KL L+ +AW +G+KT
Sbjct: 839 KRRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYMHAWIRGLKT-T 897
Query: 756 YYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
YYLR+ A++A K TV LN K D + +A CS+ + +C AC
Sbjct: 898 YYLRSLGASNAEKSTVTDGALNAVKL--IDTEPKA------CSITD-PDCEAC 941
>gi|413958909|ref|ZP_11398148.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
sp. SJ98]
gi|413941489|gb|EKS73449.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
sp. SJ98]
Length = 1000
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 313/799 (39%), Positives = 446/799 (55%), Gaps = 48/799 (6%)
Query: 4 IKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAET 63
+ +G P+ + + A + L +VA+ V +Y GV +Q+ + A
Sbjct: 158 VTDNGVTRPLDLEALKALIVSACANLGDAVSAEPIVAETV-KNLYDGVPMSQVYDSAILA 216
Query: 64 AAAMTVNHPDYALLAGRVAVSNLHK------ITKNSFSETIKDMYNYYNKRSGKKASLVA 117
A M P Y+ + R+ + + + +T+ E + + + KR G +A L+
Sbjct: 217 ARTMIEKDPAYSQVTARILLHTIRREILEEEVTQAEMGERYAEYFPQFIKR-GVEAGLLD 275
Query: 118 DDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
D + + +K L A+ +RD F Y G +TL Y L +D +E PQ MRV++G
Sbjct: 276 DKLQQFDLKR---LGAALDQNRDLQFGYLGLQTLYDRYFLHVDGTRIELPQAFFMRVAMG 332
Query: 178 IHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ ++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+
Sbjct: 333 LSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEA 391
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
LK+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 392 LKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 450
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + G W+LF PS
Sbjct: 451 GAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVVEGGDWTLFSPS 510
Query: 355 DASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKD 409
L D +G +FE Y YEE+ G K+ + A +LW ++L ETG P++ FKD
Sbjct: 511 TCPDLHDLFGADFEKAYVAYEEKAARGEIKLFKKLPAAQLWRKMLGMLFETGHPWITFKD 570
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ +
Sbjct: 571 PCNVRSPQQHVGVVHSSNLCTEITLNTSETEIAVCNLGSVNL--------------VAHM 616
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
V D L D +L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 617 VKQADGSYAL-DHAKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQD 675
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
LL P+ S EA + E + Y+A AS ELA + G Y TY GS +GIL D
Sbjct: 676 CLHLLRTPYASGEAVEFADRSMEAVCYYAYYASTELAEERGRYATYRGSLWDRGILPQDS 735
Query: 590 WN-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
+ S+ DW+ LR IS G+RNS VA PTA+ S I+G + C EP
Sbjct: 736 LKLLAEARGGYVEVDTSETMDWAQLRSRISTYGMRNSNCVAIAPTATISNIIGVSACIEP 795
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N+Y + LSGEF VVN +L++DL GLW + + + Y +G++S+I IP +L+AI
Sbjct: 796 TFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVSDLKYFDGTLSRIDRIPADLRAI 855
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +E+ K LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYL
Sbjct: 856 YATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWIRGLKT-TYYL 914
Query: 759 RTRAAADAIKFTVDTSVLN 777
RT AA K TV LN
Sbjct: 915 RTMAATHVEKSTVAHGALN 933
>gi|187925408|ref|YP_001897050.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
phytofirmans PsJN]
gi|187716602|gb|ACD17826.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
phytofirmans PsJN]
Length = 1001
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 303/769 (39%), Positives = 436/769 (56%), Gaps = 49/769 (6%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK----- 88
DP++ + +Y GV +Q+ + A A M P Y+ + R+ + + +
Sbjct: 184 ADPIIA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILKE 241
Query: 89 -ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFG 147
+T+ E + + + KR G +A L+ D + + +K L A+ +RD F Y G
Sbjct: 242 EVTQTEMGERYAEYFPQFIKR-GVQAELLDDKLLQFDLKR---LGAALDNNRDLQFGYLG 297
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPT 204
+TL Y L D +E PQ MRV++G+ ++ D A++ Y+++S F +TPT
Sbjct: 298 LQTLYDRYFLHHDGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPT 357
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I G
Sbjct: 358 LFNSGTRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKG 416
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 417 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRR 475
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAK 381
D+ A W+PDLFM+RV + G W+LF PS L D +G +FE Y+ YE++ G K
Sbjct: 476 THDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDLFGADFEKAYTAYEDKVARGEIK 535
Query: 382 MV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPE 439
+ I A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S
Sbjct: 536 LFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDA 595
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
E AVCNL S+ L +++E+ + D ++L + L+ +
Sbjct: 596 EIAVCNLGSVNLVAHLKEQA---------------DGTLVLDHDKLKRTVSVAMRMLDNV 640
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
ID+N+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A
Sbjct: 641 IDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAY 700
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVD-----------MWNITPSDRWDWSSLREMIS 608
AS ELA + G Y +Y GS +GIL D + S+ DW+ LR I+
Sbjct: 701 YASTELAQERGRYSSYRGSLWDRGILPQDSVKLLADARGGYVEVDSSESMDWTELRSRIA 760
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL G
Sbjct: 761 TYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARG 820
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LW + + Y +G++S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLN
Sbjct: 821 LWDEVMVADLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLN 880
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
I+M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 881 IYMGGASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGALN 928
>gi|167586059|ref|ZP_02378447.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
ubonensis Bu]
Length = 990
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 313/798 (39%), Positives = 445/798 (55%), Gaps = 52/798 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G P+ + + A + GL +P + + +Y GV +Q+ + A A
Sbjct: 159 NGVTRPLDLNALRALIVSACDGLGAA-VNPDPIVAETVKNLYDGVPMSQVYDSAILAART 217
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVAD 118
M P Y+ + R+ LH I + E + +M Y + + G A L+ D
Sbjct: 218 MIEKDPAYSQVTARIL---LHTIRREILGEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDD 274
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + +K L A+ +RD F Y G +TL Y L +D +E PQ MRV++G+
Sbjct: 275 KLLQFDLKR---LGDALDANRDLQFGYLGLQTLYDRYFLHVDGSRIEMPQAFFMRVAMGL 331
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+ L
Sbjct: 332 SLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEAL 390
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 391 KENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 449
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + G W+LF PS
Sbjct: 450 AVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWTLFSPST 509
Query: 356 ASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G EFE Y+ YE++ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 510 CPDLHDKFGAEFETAYTAYEDKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDP 569
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ LV
Sbjct: 570 CNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHLV 615
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 616 KQADGSYAL-DHDKLKRTVSVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDC 674
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 675 LHLLRTPYASQAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTL 734
Query: 591 N-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ S+ DWS LR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 735 KLLTEARGGYVEVDTSESLDWSELRSRIAAHGMRNSNCVAIAPTATISNIIGVSACIEPT 794
Query: 640 TSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I +P +L+AIY
Sbjct: 795 FQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRVPADLRAIY 854
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
T +E+ LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYLR
Sbjct: 855 ATAFEVDPTWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLR 913
Query: 760 TRAAADAIKFTVDTSVLN 777
T AA K TV LN
Sbjct: 914 TMAATHVEKSTVAHGALN 931
>gi|186477387|ref|YP_001858857.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
phymatum STM815]
gi|184193846|gb|ACC71811.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
phymatum STM815]
Length = 997
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 304/765 (39%), Positives = 437/765 (57%), Gaps = 48/765 (6%)
Query: 38 LVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------ITK 91
+VA+ V +Y GV +Q+ + A A M P Y+ + R+ + + + +T+
Sbjct: 187 IVAETV-KNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTSRILLHTIRREILEEEVTQ 245
Query: 92 NSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTL 151
+ + + + KR G A L+ D + + +K L A+ +RD F Y G +TL
Sbjct: 246 AEMAGRYAEYFPLFIKR-GVNAELLDDKLLQFDLKR---LGAALDANRDLQFGYLGLQTL 301
Query: 152 ERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNA 208
Y L +D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLFN+
Sbjct: 302 YDRYFLHIDGTRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNS 361
Query: 209 GTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGS 268
GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I GTNG
Sbjct: 362 GTRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGK 420
Query: 269 SNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDL 328
S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+
Sbjct: 421 SQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDM 479
Query: 329 FYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV-- 383
A W+PDLFM+RV + G W+LF PS L D +G EFE Y+ YE++ G K+
Sbjct: 480 NTANWIPDLFMKRVLEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKK 539
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAV 443
I A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E AV
Sbjct: 540 IPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAV 599
Query: 444 CNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVN 503
CNL S+ L +++E+ D ++L + L+ +ID+N
Sbjct: 600 CNLGSVNLVAHLKEQA---------------DGTLALDHDKLKRTISVAMRMLDNVIDIN 644
Query: 504 HYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASA 563
+Y + R SNL+HRP+G+GI G D +L P+ S EA + E + Y+A AS
Sbjct: 645 YYAVAKARNSNLKHRPVGMGIMGFQDCLHVLRTPYASQEAVEFADRSMEAVCYYAYWAST 704
Query: 564 ELAVKDGPYETYFGSPMSKGILQVDMWN-----------ITPSDRWDWSSLREMISKNGV 612
ELA + G Y TY GS +GIL D + S+ DW+SLR I+ +G+
Sbjct: 705 ELAEERGRYSTYRGSLWDRGILPQDTLKLLADARGGYVEVDSSESMDWASLRSRIATHGM 764
Query: 613 RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSH 672
RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L++DL GLW
Sbjct: 765 RNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKARGLWDE 824
Query: 673 ALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHME 732
+ + Y +GS+S+I +P +L+AIY T +E+ LV+ A+ R +IDQ+QSLNI+M
Sbjct: 825 VMVADLKYFDGSLSRIDRVPADLRAIYATAFEVDATWLVEAASRRQKWIDQAQSLNIYMA 884
Query: 733 QPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 885 GASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 928
>gi|170695323|ref|ZP_02886469.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
graminis C4D1M]
gi|170139723|gb|EDT07905.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
graminis C4D1M]
Length = 1001
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 303/765 (39%), Positives = 437/765 (57%), Gaps = 48/765 (6%)
Query: 38 LVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------ITK 91
+VA+ V +Y GV +Q+ + A A M P Y+ + R+ + + + +T+
Sbjct: 187 IVAETV-KNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQ 245
Query: 92 NSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTL 151
E + + + KR G +A L+ D + + +K L A+ +RD F Y G +TL
Sbjct: 246 AEMGERYAEYFPQFIKR-GVQAELLDDKLLQFDLKR---LGAALDNNRDLQFGYLGLQTL 301
Query: 152 ERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNA 208
Y L D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLFN+
Sbjct: 302 YDRYFLHHDGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNS 361
Query: 209 GTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGS 268
GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I GTNG
Sbjct: 362 GTRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGK 420
Query: 269 SNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDL 328
S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+
Sbjct: 421 SQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDM 479
Query: 329 FYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV-- 383
A W+PDLFM+RV + G W+LF PS L D +G EFE Y+ YE++ G K+
Sbjct: 480 NTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKK 539
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAV 443
+ A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E AV
Sbjct: 540 VPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAV 599
Query: 444 CNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVN 503
CNL S+ L +++E+ + D ++L + L+ +ID+N
Sbjct: 600 CNLGSVNLVAHLKEQA---------------DGTLVLDHDKLKRTVSVAMRMLDNVIDIN 644
Query: 504 HYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASA 563
+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A AS
Sbjct: 645 YYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAYYAST 704
Query: 564 ELAVKDGPYETYFGSPMSKGILQVD-----------MWNITPSDRWDWSSLREMISKNGV 612
ELA + G Y +Y GS +GIL D + S+ DW+ LR+ I+ G+
Sbjct: 705 ELAQERGRYSSYRGSLWDRGILPQDSVKLLADARGGYVEVDSSESMDWTELRQRIATYGM 764
Query: 613 RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSH 672
RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL GLW
Sbjct: 765 RNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDE 824
Query: 673 ALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHME 732
+ + Y +G++S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLNI+M
Sbjct: 825 VMVADLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMG 884
Query: 733 QPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 885 GASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGALN 928
>gi|167580511|ref|ZP_02373385.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis TXDOH]
Length = 950
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 310/767 (40%), Positives = 430/767 (56%), Gaps = 47/767 (6%)
Query: 36 PVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------I 89
P + + +Y GV TQ+ + A A M P Y+ + R+ + + + +
Sbjct: 188 PEPIVAETVKNLYDGVPMTQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILGEEV 247
Query: 90 TKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
T+ S + + + KR G +A L+ D + + +K L A+ RD F Y G +
Sbjct: 248 TQAEMSTRYAEYFPQFLKR-GVEAELLDDKLLQFDLKR---LGDALDASRDLQFGYLGLQ 303
Query: 150 TLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLF 206
TL Y L +D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLF
Sbjct: 304 TLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYNVLSSFDFMSSTPTLF 363
Query: 207 NAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTN 266
N+GT + QLSSC+L + DD ++GIY+ LK A++SK AGG+G +RA GS+I GTN
Sbjct: 364 NSGTRRSQLSSCYLTTVADD-LDGIYEALKDNALLSKFAGGLGNDWTRVRALGSHIKGTN 422
Query: 267 GSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRAR 326
G S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 423 GKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTH 481
Query: 327 DLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV 383
D+ A W+PDLFM+RV + W+LF PS L D +G EFE Y YEE+ G K+
Sbjct: 482 DMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLY 541
Query: 384 --ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEET 441
I A++LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E
Sbjct: 542 KKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEI 601
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L V+ L D L D E+L + L+ +ID
Sbjct: 602 AVCNLGSVNL--------------VAHLAKQADGSYAL-DEEKLKRTVSVAMRMLDNVID 646
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N+Y + R SNL+HRP+G+GI G D LL PF S EA + E + Y+A A
Sbjct: 647 INYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPFASDEAVEFADRSMEAVCYYAYWA 706
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMISKN 610
S ELA + G Y +Y GS +GIL D + R DW +LR I
Sbjct: 707 STELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSATLDWPALRARIDSF 766
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLW 670
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L++DL E GLW
Sbjct: 767 GMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLW 826
Query: 671 SHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIH 730
+ + Y +G +S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLNI+
Sbjct: 827 DEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIY 886
Query: 731 MEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 887 MAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 932
>gi|388456663|ref|ZP_10138958.1| ribonucleotide-diphosphate reductase subunit alpha [Fluoribacter
dumoffii Tex-KL]
Length = 941
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 311/803 (38%), Positives = 444/803 (55%), Gaps = 57/803 (7%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG +P+ +++ + + L +PV+ + +Y + + A
Sbjct: 147 DGELKPLDTERMNTIVNEACRDLEHVQAEPVI--KDAMRNLYNQAKFEDVHKALIMAART 204
Query: 67 MTVNHPDYALLAGRVAVSNLH-------KITKNSFSETIKDMYNYYNK---RSGKKASLV 116
+ P+Y ++ R+ + +L +I ++ + + +Y Y K G K ++
Sbjct: 205 LVEKEPNYTYVSARLLLDSLRMEALSKLEIQSDATFDEMSALYPSYFKLYIAHGIKQGML 264
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSV 176
+ + ++ L A++ +RD F Y +TL Y + E PQ MRV++
Sbjct: 265 DAKMADFDLEK---LGKALLPERDMKFSYLSLQTLYDRYFIHEHGVRYELPQAFFMRVAM 321
Query: 177 GI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYD 233
G+ KD D A++ Y L+S + +TPTLFN+GT +PQLSSC+L + D ++GIY
Sbjct: 322 GLALREKDKEDKAIEFYQLLSSFDYMSSTPTLFNSGTIRPQLSSCYLTTVPD-HLDGIYS 380
Query: 234 TLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKR 293
+K A++SK AGG+G +RA GS+I GTNG S G+VP L V + TA V+QGG KR
Sbjct: 381 AIKDNALLSKYAGGLGNDWTPVRAMGSHIKGTNGKSQGVVPFLNVADATAVAVNQGG-KR 439
Query: 294 KGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCP 353
KGA YLE WH D+ EFL+LRKN G + R D+ ALW+PDLFM RVR++G W+LF P
Sbjct: 440 KGAVCAYLECWHKDVEEFLELRKNTGDDRRRTHDMNTALWIPDLFMVRVRENGDWTLFSP 499
Query: 354 SDASGLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETGTPYMLFK 408
+ L D +G FE LY +YEE+ ++ +SA KLW ++L+ ETG P+M FK
Sbjct: 500 DEVPDLHDQYGKAFETLYREYEEKAHQGLIKNAKTVSAVKLWRKMLSMLFETGHPWMTFK 559
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D CN +S QQ+ G + SSNLCTEI +S EE AVCNL SI LP +++
Sbjct: 560 DPCNLRSPQQHTGVVHSSNLCTEITLNTSEEEIAVCNLGSINLPAHIK------------ 607
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
K +L D ++L K L+ +ID+N+Y + R SNL+HRPIG+G+ G
Sbjct: 608 -------KGKL-DTDKLRRTIKTAIRMLDNVIDINYYSVPQARNSNLKHRPIGLGLMGFQ 659
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D L + + SPEA + E I Y+A++AS +LA + G Y TY GS SKGIL +D
Sbjct: 660 DALYELKIDYASPEAVEFADSSMELISYYAIEASCDLAKERGSYSTYEGSLWSKGILPID 719
Query: 589 MWNITP-----------SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
++ S R DW SLR + G+RNS ++A PTA+ S I G ++ E
Sbjct: 720 SISLLQQARDKYLEQDRSQRLDWESLRIKVRTQGMRNSNVMAIAPTATISNICGVSQSIE 779
Query: 638 PYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKA 697
P N+Y + LSGEF VVN +L+ DL L LW + + Y NGSV IS IP ELK
Sbjct: 780 PTYQNLYVKSNLSGEFTVVNPYLVADLKALNLWDEVMVNDLKYFNGSVQPISRIPAELKQ 839
Query: 698 IYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYY 757
Y T +EI LVD A+ R +IDQ+QSLNI+M QP KL L+ +AW +G+KT YY
Sbjct: 840 RYATSFEIDPIWLVDAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYMHAWMRGLKT-TYY 898
Query: 758 LRTRAAADAIKFTVDTSVLNNEK 780
LR+ A++A K TV LN K
Sbjct: 899 LRSLGASNAEKSTVTDGALNAVK 921
>gi|323527396|ref|YP_004229549.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
sp. CCGE1001]
gi|323384398|gb|ADX56489.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. CCGE1001]
Length = 1006
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 304/765 (39%), Positives = 435/765 (56%), Gaps = 48/765 (6%)
Query: 38 LVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------ITK 91
+VA+ V +Y GV +Q+ + A A M P Y+ + R+ + + + +T+
Sbjct: 187 IVAETV-KNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQ 245
Query: 92 NSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTL 151
E + + + KR G +A L+ D + + +K L A+ +RD F Y G +TL
Sbjct: 246 AEMGERYAEYFPQFIKR-GVQAELLDDKLLQFDLKR---LGAALDANRDLQFGYLGLQTL 301
Query: 152 ERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNA 208
Y L D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLFN+
Sbjct: 302 YDRYFLHHDGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNS 361
Query: 209 GTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGS 268
GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I GTNG
Sbjct: 362 GTRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGK 420
Query: 269 SNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDL 328
S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+
Sbjct: 421 SQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDM 479
Query: 329 FYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV-- 383
A W+PDLFM+RV + G W+LF PS L D +G EFE Y+ YE++ G K+
Sbjct: 480 NTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKK 539
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAV 443
I A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E AV
Sbjct: 540 IPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAV 599
Query: 444 CNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVN 503
CNL S+ L +++E+ D ++L + L+ +ID+N
Sbjct: 600 CNLGSVNLVAHLKEQA---------------DGTLALDHDKLKRTVSVAMRMLDNVIDIN 644
Query: 504 HYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASA 563
+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A AS
Sbjct: 645 YYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAYYAST 704
Query: 564 ELAVKDGPYETYFGSPMSKGILQVD-----------MWNITPSDRWDWSSLREMISKNGV 612
ELA + G Y +Y GS +GIL D + S+ DW+ LR I+ G+
Sbjct: 705 ELAQERGRYSSYRGSLWDRGILPQDSVKLLAEARGGYVEVDSSESMDWTELRSRIATYGM 764
Query: 613 RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSH 672
RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL GLW
Sbjct: 765 RNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDE 824
Query: 673 ALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHME 732
+ + Y +G++S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLNI+M
Sbjct: 825 VMVADLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMA 884
Query: 733 QPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 885 GASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGALN 928
>gi|407714790|ref|YP_006835355.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
phenoliruptrix BR3459a]
gi|407236974|gb|AFT87173.1| ribonucleoside-diphosphate reductase alpha chain [Burkholderia
phenoliruptrix BR3459a]
Length = 1000
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 304/765 (39%), Positives = 435/765 (56%), Gaps = 48/765 (6%)
Query: 38 LVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------ITK 91
+VA+ V +Y GV +Q+ + A A M P Y+ + R+ + + + +T+
Sbjct: 187 IVAETV-KNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQ 245
Query: 92 NSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTL 151
E + + + KR G +A L+ D + + +K L A+ +RD F Y G +TL
Sbjct: 246 AEMGERYAEYFPQFIKR-GVQAELLDDKLLQFDLKR---LGAALDANRDLQFGYLGLQTL 301
Query: 152 ERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNA 208
Y L D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLFN+
Sbjct: 302 YDRYFLHHDGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNS 361
Query: 209 GTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGS 268
GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I GTNG
Sbjct: 362 GTRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGK 420
Query: 269 SNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDL 328
S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+
Sbjct: 421 SQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDM 479
Query: 329 FYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV-- 383
A W+PDLFM+RV + G W+LF PS L D +G EFE Y+ YE++ G K+
Sbjct: 480 NTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKK 539
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAV 443
I A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E AV
Sbjct: 540 IPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAV 599
Query: 444 CNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVN 503
CNL S+ L +++E+ D ++L + L+ +ID+N
Sbjct: 600 CNLGSVNLVAHLKEQA---------------DGTLALDHDKLKRTVSVAMRMLDNVIDIN 644
Query: 504 HYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASA 563
+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A AS
Sbjct: 645 YYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAYYAST 704
Query: 564 ELAVKDGPYETYFGSPMSKGILQVD-----------MWNITPSDRWDWSSLREMISKNGV 612
ELA + G Y +Y GS +GIL D + S+ DW+ LR I+ G+
Sbjct: 705 ELAQERGRYSSYRGSLWDRGILPQDSVKLLAEARGGYVEVDSSESMDWTELRSRIATYGM 764
Query: 613 RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSH 672
RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL GLW
Sbjct: 765 RNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDE 824
Query: 673 ALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHME 732
+ + Y +G++S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLNI+M
Sbjct: 825 VMVADLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMA 884
Query: 733 QPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 885 GASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGALN 928
>gi|238026166|ref|YP_002910397.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
glumae BGR1]
gi|237875360|gb|ACR27693.1| Ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
glumae BGR1]
Length = 999
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 319/799 (39%), Positives = 446/799 (55%), Gaps = 56/799 (7%)
Query: 8 GRKEPVRFDKITARLKKLSYGL-SKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
G P+ + + GL S + DP+ VA+ V +Y GV +Q+ + A A
Sbjct: 160 GVTRPLDMGALRGLIASACEGLGSAVNPDPI-VAETV-KNLYDGVPMSQVYDSAILAART 217
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIK--DMYNYYNK------RSGKKASLVAD 118
M P Y+ + R+ LH I + E + +M Y + + G +A L+ D
Sbjct: 218 MIEKDPAYSQVTARIL---LHTIRREILGEEVSQGEMQARYAEYFPQFLKRGVEAELLDD 274
Query: 119 DVYEI-IMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
+ + +++ LD RD F Y G +TL Y L +D +E PQ MRV++G
Sbjct: 275 KLLQFDLVRLGEALDAG----RDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMG 330
Query: 178 IHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ ++ D A++ YH++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+
Sbjct: 331 LALNEIDREARAIEFYHVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIYEA 389
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
LK+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 390 LKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 448
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + W+LF PS
Sbjct: 449 GAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPS 508
Query: 355 DASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKD 409
L D +G EFE Y YEE+ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 509 TCPDLHDKFGAEFEAAYLGYEEKVARGELKLFKKIPAQQLWRKMLGMLFETGHPWITFKD 568
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ L
Sbjct: 569 PCNVRSPQQHVGVVHSSNLCTEITLNTSDSEIAVCNLGSVNL--------------VAHL 614
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
V D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 615 VKQADGSYAL-DHDKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGFQD 673
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
LL PF S A + E + Y+A AS EL+ + G Y +Y GS +GIL D
Sbjct: 674 CLHLLRTPFSSDAAVEFADRSMEAVCYYAYWASTELSEERGRYSSYRGSLWDRGILPQDT 733
Query: 590 WNITPSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
+ R DW+SLRE IS +G+RNS +A PTA+ S I+G + C EP
Sbjct: 734 LKLLEEARGGYVEVDMSSSLDWTSLRERISLHGMRNSNCIAIAPTATISNIIGVSPCIEP 793
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N++ + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AI
Sbjct: 794 TFQNLFVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPSDLRAI 853
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +E+ K LV+ A+ R +IDQ+QSLNI M KL ++ AW +G+KT YYL
Sbjct: 854 YATAFEVDPKWLVEAASRRQKWIDQAQSLNIFMAGASGKKLDEIYKLAWVRGLKT-TYYL 912
Query: 759 RTRAAADAIKFTVDTSVLN 777
RT AA K TV LN
Sbjct: 913 RTMAATHVEKSTVAHGALN 931
>gi|390576355|ref|ZP_10256425.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
terrae BS001]
gi|420255797|ref|ZP_14758673.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. BT03]
gi|389931694|gb|EIM93752.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
terrae BS001]
gi|398044510|gb|EJL37328.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. BT03]
Length = 997
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 303/764 (39%), Positives = 433/764 (56%), Gaps = 47/764 (6%)
Query: 39 VAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------ITKN 92
+ + +Y GV TQ+ + A A M P Y+ + R+ + + + +T+
Sbjct: 187 IVTETIKNLYDGVPMTQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEDEVTQA 246
Query: 93 SFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLE 152
E + + + KR G A L+ + + + +K L A+ +RD F Y G +TL
Sbjct: 247 EMGERYAEYFPLFIKR-GVNAELLDEKLLQFDLKR---LGAALDANRDLQFGYLGLQTLY 302
Query: 153 RSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAG 209
Y L D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLFN+G
Sbjct: 303 DRYFLHSDGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSG 362
Query: 210 TPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSS 269
T + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I GTNG S
Sbjct: 363 TRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKS 421
Query: 270 NGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLF 329
G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+
Sbjct: 422 QGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMN 480
Query: 330 YALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV--I 384
A W+PDLFM+RV + G W+LF PS L D +G +FE Y+ YEE+ G K+ I
Sbjct: 481 TANWIPDLFMKRVHEGGDWTLFSPSTCPDLHDLFGADFEKAYTAYEEKAARGEIKLFKKI 540
Query: 385 SARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVC 444
A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E AVC
Sbjct: 541 PAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVC 600
Query: 445 NLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNH 504
NL S+ L +++E+ + D ++L + L+ +ID+N+
Sbjct: 601 NLGSVNLVAHLKEQA---------------DGTVVLDHDKLKRTISVAMRMLDNVIDINY 645
Query: 505 YPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAE 564
Y + R SNL+HRP+G+GI G D +L P+ S EA + E + Y+A AS E
Sbjct: 646 YAVAKARNSNLKHRPVGMGIMGFQDCLHVLRTPYASQEAVEFADRSMEAVCYYAYWASTE 705
Query: 565 LAVKDGPYETYFGSPMSKGILQVDMWN-----------ITPSDRWDWSSLREMISKNGVR 613
LA + G Y TY GS +GIL D + S+ DW+SLR IS +G+R
Sbjct: 706 LAEERGRYATYRGSLWDRGILPQDTLKLLEEARGGYIEVDSSESMDWASLRSRISTHGMR 765
Query: 614 NSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHA 673
NS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL GLW
Sbjct: 766 NSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEV 825
Query: 674 LKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQ 733
+ + Y +GS+S+I +P +L+AIY T +E+ LV+ A+ R +IDQ+QSLNI+M
Sbjct: 826 MVADLKYFDGSLSRIDRVPGDLRAIYATAFEVDATWLVEAASRRQKWIDQAQSLNIYMAG 885
Query: 734 PDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 886 ASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 928
>gi|134294682|ref|YP_001118417.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
vietnamiensis G4]
gi|387901271|ref|YP_006331610.1| ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Burkholderia sp. KJ006]
gi|134137839|gb|ABO53582.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
vietnamiensis G4]
gi|387576163|gb|AFJ84879.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Burkholderia sp. KJ006]
Length = 996
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 317/799 (39%), Positives = 449/799 (56%), Gaps = 54/799 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKE-HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAA 65
+G P+ + + A + GL + DP+ VA+ V +Y GV +Q+ + A A
Sbjct: 161 NGVTRPLDMNALRALIVSACDGLGTAVNADPI-VAETV-KNLYDGVPMSQVYDSAILAAR 218
Query: 66 AMTVNHPDYALLAGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVA 117
M P Y+ + R+ LH I + E + DM Y + + G A L+
Sbjct: 219 TMIEKDPAYSQVTARIL---LHTIRREILGEEVVQADMSARYAEYFPQFLKRGVDAGLLD 275
Query: 118 DDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
D + + +K L A+ +RD F Y G +TL Y L +D +E PQ MRV++G
Sbjct: 276 DKLLQFDLKR---LGEALDANRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMG 332
Query: 178 IHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ ++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+
Sbjct: 333 LSLNEIDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEA 391
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
LK+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 392 LKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 450
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + W+LF PS
Sbjct: 451 GAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGSDWTLFSPS 510
Query: 355 DASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKD 409
L D +G +FE Y+ YE++ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 511 TCPDLHDKFGADFEKAYTAYEDKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKD 570
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ L
Sbjct: 571 PCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHL 616
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
V D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 617 VKQADGSYAL-DHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQD 675
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 676 CLHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDT 735
Query: 590 WN-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
+ S+ DWS+LR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 736 LKLLAEARGGYVEVDTSESLDWSTLRSRIAAHGMRNSNCVAIAPTATISNIIGVSACIEP 795
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AI
Sbjct: 796 TFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAI 855
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +E+ LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYL
Sbjct: 856 YATAFEVDPTWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TYYL 914
Query: 759 RTRAAADAIKFTVDTSVLN 777
RT AA K TV LN
Sbjct: 915 RTMAATHVEKSTVAHGALN 933
>gi|152979866|ref|YP_001354669.1| ribonucleotide-diphosphate reductase subunit alpha
[Janthinobacterium sp. Marseille]
gi|151279943|gb|ABR88353.1| ribonucleoside-diphosphate reductase alpha chain [Janthinobacterium
sp. Marseille]
Length = 963
Score = 534 bits (1375), Expect = e-148, Method: Compositional matrix adjust.
Identities = 305/801 (38%), Positives = 450/801 (56%), Gaps = 57/801 (7%)
Query: 4 IKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAET 63
+ DG++ P+ +++ + GL K H D + + +Y GV +L + A
Sbjct: 155 VTEDGQRRPLDMNQVRDLINAACIGLEK-HVDAEAILHETVKNLYDGVPVEELHKSAILA 213
Query: 64 AAAMTVNHPDYALLAGRVAVSNLHKITKNSF------SETIKDMYNYYNK--RSGKKASL 115
A A+ P Y+ + R+ +H I K F ++ Y+ K + G +A L
Sbjct: 214 ARALMEKDPAYSTVTARLL---MHTIRKEVFGLEVAQADAPAQYLEYFPKFIKKGIEAEL 270
Query: 116 VADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVS 175
+ + + +K L A++ +RD F Y G +TL Y L + +E PQ MRV+
Sbjct: 271 LDAKLGQFDLKK---LGDALVPERDLQFGYLGLQTLYDRYFLHIRDTRIEMPQAFYMRVA 327
Query: 176 VGIHKDDT---DSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIY 232
+G+ ++ + A++ Y+L+S F +TPTLFN+GT + QLSSC+L + DD ++GIY
Sbjct: 328 MGLALNEINREERAIEFYNLLSSFDFMSSTPTLFNSGTQRSQLSSCYLTTVADD-LDGIY 386
Query: 233 DTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGK 292
+ +K+ A+++K AGG+G +R+ G++I GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 387 EAIKENALLAKYAGGLGNDWTPVRSLGAHIKGTNGRSQGVVPFLKVVNDTAVAVNQGG-K 445
Query: 293 RKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFC 352
RKGA YLE WH DI EFLDLRKN G + R D+ A W+PDLFM+RV + G+W+LF
Sbjct: 446 RKGAVCAYLETWHMDIEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVMEKGEWTLFS 505
Query: 353 PSDASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLF 407
PSDA L D G FE Y+ YE + G K+ I A LW ++L+ ETG P++ F
Sbjct: 506 PSDAPDLHDKVGKAFEAAYTGYEAKAARGELKLFKKIQALDLWRKMLSMLFETGHPWITF 565
Query: 408 KDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVS 467
KD CN +S QQ++G + SSNLCTEI ++ E AVCNL S+ +P ++
Sbjct: 566 KDPCNIRSPQQHVGVVHSSNLCTEITLNTNDSEIAVCNLGSVNMPAHM------------ 613
Query: 468 KLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGL 527
K+ D +L + + L+ +ID+N+Y ++ R SNLRHRP+G+GI G
Sbjct: 614 --------KDGQLDHVKLQKTVRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGIMGF 665
Query: 528 ADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQV 587
D ++ +P+ S EA Q E + Y+A AS ELA + G Y +Y GS +GIL
Sbjct: 666 QDCLHMMRIPYASDEAVQFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQ 725
Query: 588 DMWNITPSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D + +R DW+ LRE I + G+RNS VA PTA+ S I+G + C
Sbjct: 726 DSLKLLQEERGGYLEADLTETLDWTPLRERIKQFGMRNSNCVAIAPTATISNIIGVSACI 785
Query: 637 EPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELK 696
EP N+Y + LSGEF +N++L++DL GLW + + + Y +GS++KI IP++L+
Sbjct: 786 EPTYQNLYVKSNLSGEFTEINEYLVRDLKARGLWDEVMISDLKYFDGSLAKIDRIPQDLR 845
Query: 697 AIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMY 756
IY T +E++ K LV+ A+ R +IDQ+QSLNI+M KL + AW +G+KT Y
Sbjct: 846 DIYSTAFEVEPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDDTYKLAWLRGLKT-TY 904
Query: 757 YLRTRAAADAIKFTVDTSVLN 777
YLRT A K T T LN
Sbjct: 905 YLRTMGATHTEKSTSKTGALN 925
>gi|30250347|ref|NP_842417.1| ribonucleotide-diphosphate reductase subunit alpha [Nitrosomonas
europaea ATCC 19718]
gi|30181142|emb|CAD86335.1| Ribonucleotide reductase large subunit [Nitrosomonas europaea ATCC
19718]
Length = 955
Score = 534 bits (1375), Expect = e-148, Method: Compositional matrix adjust.
Identities = 317/833 (38%), Positives = 465/833 (55%), Gaps = 54/833 (6%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
++V++ +G+K P+ ++ AR++ L D L+ + + +Y GV ++ + A
Sbjct: 151 LHVVE-NGQKIPLDPAQLMARIESACQNLGNT-VDAALIVKSMLKDLYDGVPAEEVRKSA 208
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHK--ITKNSFSETIKDMYNYYNK---RSGKKASL 115
+A A+ P Y+ + R+ + N+ + + E ++ Y Y R G +A L
Sbjct: 209 ILSARALIEKEPAYSFVTARLLLDNIRYEVLGEEVAHEAMQSRYAEYFPEFVRKGIEAGL 268
Query: 116 VADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVS 175
+ + + + + A L A+ DRD F Y G +TL Y L + R +E PQ MRV+
Sbjct: 269 LDERLGQF---DLARLSEALAADRDLQFGYLGLQTLYDRYFLHVSERRIELPQIFFMRVA 325
Query: 176 VGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIY 232
+G+ ++ D A++ YHL+S+ F +TPTLFN+GT + QLSSC+L + D S++GIY
Sbjct: 326 MGLALNEIDREARAIEFYHLLSKFDFMSSTPTLFNSGTRRSQLSSCYLSTVPD-SLDGIY 384
Query: 233 DTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGK 292
+ +K+ A++SK AGG+G +RA G+ I GTNG S G+VP L+V +DTA V+QGG K
Sbjct: 385 EAIKENALLSKFAGGLGNDWTPVRAMGARIKGTNGKSQGVVPFLKVVSDTAVAVNQGG-K 443
Query: 293 RKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A+WVPDLFM+R+++D +W+LF
Sbjct: 444 RKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTAVWVPDLFMKRMQEDQEWTLFS 503
Query: 353 PSDASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLF 407
PSD L D +G FE Y YEE+ GR + I AR+LW ++L ETG P++ F
Sbjct: 504 PSDTPDLHDKFGRAFEEAYIAYEEQAAQGRLTLFKRIPARQLWRKMLTMLFETGHPWITF 563
Query: 408 KDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVS 467
KD CN +S Q ++G + SSNLCTEI +S +E AVCNL S+ L ++
Sbjct: 564 KDPCNIRSPQNHVGVVHSSNLCTEITLNTSEKEIAVCNLGSVNLLAHIV----------- 612
Query: 468 KLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGL 527
D K D RL + L+ +ID+N Y + R +N RHRP+G+GI G
Sbjct: 613 ------DGK---LDQARLKQTVTTAMRMLDNVIDINFYAVAKARNANFRHRPVGLGIMGF 663
Query: 528 ADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQV 587
D LG+ + SPEA + E + YH AS ELA + G Y TY GS +GIL
Sbjct: 664 QDCLHKLGISYASPEAVEFADRSMEAVAYHTYWASTELAEERGTYATYRGSLWDRGILPQ 723
Query: 588 DMWNITPSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D + +R DW +LR+ I + G+RNS +A PTA+ S I+G +
Sbjct: 724 DTLELLREERGGHVEIDTSSTQDWDALRDRIRQYGMRNSNCLAIAPTATISNIIGVSASI 783
Query: 637 EPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELK 696
EP N+Y + LSGEF VVN+ L+ DL + LW + + + +G+VSKI +PE L+
Sbjct: 784 EPTYQNLYVKSNLSGEFTVVNQWLVNDLKKQDLWDEVMIADLKHYDGAVSKIDRVPENLR 843
Query: 697 AIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMY 756
+Y T +E+ + LV+ A+ R +IDQ+QSLN++M K+ L+ AW +G+KT Y
Sbjct: 844 NLYATAFEVDPRWLVEAASRRQKWIDQAQSLNLYMAGASGKKMDELYRLAWLRGLKT-TY 902
Query: 757 YLRTRAAADAIKFTVDTSVLNNEKA-NRADNDVEANLAQVVCSLKNQEECMAC 808
YLR A A K TV T LN A + A A+ A C++ N EC AC
Sbjct: 903 YLRALGATTAEKSTVHTGTLNAVPAQHEAHAGNLAHSAPQQCAIDN-PECEAC 954
>gi|377821696|ref|YP_004978067.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
sp. YI23]
gi|357936531|gb|AET90090.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. YI23]
Length = 1001
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 312/799 (39%), Positives = 447/799 (55%), Gaps = 48/799 (6%)
Query: 4 IKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAET 63
+ +G P+ D + A + L +VA+ V +Y GV +Q+ + A
Sbjct: 159 VTDNGVTHPLDMDALKALIVSACANLGDAVSADPIVAETV-KNLYDGVPMSQVYDSAILA 217
Query: 64 AAAMTVNHPDYALLAGRVAVSNLHK------ITKNSFSETIKDMYNYYNKRSGKKASLVA 117
A M P Y+ + R+ + + + +T+ E + + + KR G +A L+
Sbjct: 218 ARTMIEKDPAYSQVTSRILLHTIRREILEGEVTQAEMGERYAEYFPLFIKR-GVEAGLLD 276
Query: 118 DDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
D + + +K L A+ +RD F Y G +TL Y L ++ +E PQ MRV++G
Sbjct: 277 DKLQQFDLKR---LGAALDANRDLQFGYLGLQTLYDRYFLHVEGTRIELPQAFFMRVAMG 333
Query: 178 IHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ ++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+
Sbjct: 334 LSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVSDD-LDGIYEA 392
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
LK+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 393 LKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 451
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + G W+LF PS
Sbjct: 452 GAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVVEGGDWTLFSPS 511
Query: 355 DASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKD 409
L D +G +FE Y YEE+ G K+ + A +LW ++L ETG P++ FKD
Sbjct: 512 TCPDLHDLFGADFEKAYVAYEEKAARGEIKLFKKLPAAQLWRKMLGMLFETGHPWITFKD 571
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ +
Sbjct: 572 PCNVRSPQQHVGVVHSSNLCTEITLNTSETEIAVCNLGSVNL--------------VAHM 617
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
V D L D +L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 618 VKQADGTYAL-DHAKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQD 676
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
LL P+ S +A + E + Y+A AS ELA + G Y TY GS +GIL D
Sbjct: 677 CLHLLRTPYASGDAVEFADRSMEAVCYYAYYASTELAEERGRYATYRGSLWDRGILPQDS 736
Query: 590 WN-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
+ S+ DW +LR IS+ G+RNS VA PTA+ S I+G + C EP
Sbjct: 737 LKLLADARGGYVEVDSSESMDWPALRSRISQYGMRNSNCVAIAPTATISNIIGVSACIEP 796
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N+Y + LSGEF VVN +L++DL GLW + + + Y +G++S+I IP +L+AI
Sbjct: 797 TFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVSDLKYFDGTLSRIDRIPADLRAI 856
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +E+ K LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYL
Sbjct: 857 YATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWIRGLKT-TYYL 915
Query: 759 RTRAAADAIKFTVDTSVLN 777
RT AA K TV LN
Sbjct: 916 RTMAATHVEKSTVAHGALN 934
>gi|226940722|ref|YP_002795796.1| NrdA [Laribacter hongkongensis HLHK9]
gi|226715649|gb|ACO74787.1| NrdA [Laribacter hongkongensis HLHK9]
Length = 917
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 311/830 (37%), Positives = 463/830 (55%), Gaps = 59/830 (7%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
++V + DG + P+ +++ +L+ +GL + L+A + +Y GVT +++
Sbjct: 124 LHVTRPDGSRAPLDIERLGRQLEAACHGLEADTRPAALLADTL-KNLYDGVTEAEVERAL 182
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
+A P Y + R+ + + + + T +++ +R G +A L+ +
Sbjct: 183 ILSARQWIERDPAYDKVTARLLLDTIRREVAGGVAATYAEVFQQGIQR-GMQADLLDPRL 241
Query: 121 YEI-IMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI- 178
+ + + AA LDG +RD F Y G +TL Y L +D R +E PQ MRV++G+
Sbjct: 242 ADFDLPRLAAALDG----ERDRQFGYLGLQTLYDRYFLHVDGRRIEMPQTFFMRVAMGLA 297
Query: 179 --HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLK 236
D T A++ Y L+S+ F +TPTLFNAGT QLSSC+L + D S++GI+D +K
Sbjct: 298 LNEADPTTQAMEFYDLLSRFDFMSSTPTLFNAGTRHSQLSSCYLTTIAD-SLDGIFDAIK 356
Query: 237 KCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGA 296
+ A +SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 357 ENAQLSKFAGGLGNDWTPVRALGSHIKGTNGQSQGVVPFLKVANDTAVAVNQGG-KRKGA 415
Query: 297 FAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDA 356
YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV ++ +W+LF P+D
Sbjct: 416 VCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMQRVMENAEWTLFSPADV 475
Query: 357 SGLADSWGIEFEHLYSQYEEEGRAKMVISARKL-----WFEILNSQIETGTPYMLFKDSC 411
L D G F Y++YE RA + +A+ L W ++L ETG P++ +KD+C
Sbjct: 476 PDLHDLTGRAFARRYAEYEAMARADTLRNAKTLRAVDLWRKMLTMLFETGHPWLTWKDAC 535
Query: 412 NRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVG 471
N +S QQ++G + SSNLCTEI +S +E AVCNL S+ L +++E +
Sbjct: 536 NLRSPQQHVGRVHSSNLCTEITLNTSDDEIAVCNLGSVNLANHLKEGAL----------- 584
Query: 472 SRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTF 531
D E+LA ++ L+ +ID+N YP+E R +NLRHRP+G+G+ G D
Sbjct: 585 ---------DQEKLARTVRVAMRMLDNVIDLNFYPVEKARTANLRHRPVGLGVMGFQDCL 635
Query: 532 ILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD--- 588
LL LP+ S A + E I YHA AS ELA G Y ++ GS S+GIL D
Sbjct: 636 HLLRLPYGSQAAVGFADESMELIAYHAYLASTELAEMRGCYPSFEGSLWSQGILPQDSVE 695
Query: 589 --------MWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
+ S R DW+ +RE I++ G+RNS +A PTA+ + I+G + EP
Sbjct: 696 LLAAERQGYLEVDRSSRLDWTPVRERIARFGMRNSNCLAIAPTATIANIIGVSASIEPTY 755
Query: 641 SNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYK 700
N++ + LSGEF VVN+ L++DL LGLW + + Y +G ++ I IP+++K +Y
Sbjct: 756 KNLFVKSNLSGEFTVVNEFLVQDLKRLGLWDAVMLADLKYFDGDLAPIERIPQDIKTLYA 815
Query: 701 TVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRT 760
T +++ LV+ A+ R +IDQ+QSLN++M KL +L+ AW +G+KT YYLRT
Sbjct: 816 TAFDVDPGWLVEAASRRQKWIDQAQSLNLYMAGASGKKLDTLYKLAWVRGLKT-TYYLRT 874
Query: 761 RAAADAIKFTVDTSVLNNEKANRADNDVEANLAQ--VVCSLKNQEECMAC 808
AA A K T LN +E + CS+ N +C AC
Sbjct: 875 LAATSAEKSTGRGGELNAVP-------IEGGMVAEPKFCSIDN-PDCEAC 916
>gi|295677727|ref|YP_003606251.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
sp. CCGE1002]
gi|295437570|gb|ADG16740.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. CCGE1002]
Length = 1003
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 304/765 (39%), Positives = 436/765 (56%), Gaps = 48/765 (6%)
Query: 38 LVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------ITK 91
+VA+ V +Y GV +Q+ + A A M P Y+ + R+ + + + +T+
Sbjct: 188 IVAETV-KNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQ 246
Query: 92 NSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTL 151
E + + + KR G +A L+ D + + +K L A+ +RD F Y G +TL
Sbjct: 247 AEMGERYAEYFPQFIKR-GVQAELLDDKLLQFDLKR---LGAALDANRDLQFGYLGLQTL 302
Query: 152 ERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNA 208
Y L D+ +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLFN+
Sbjct: 303 YDRYFLHHDNVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNS 362
Query: 209 GTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGS 268
GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I GTNG
Sbjct: 363 GTRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGK 421
Query: 269 SNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDL 328
S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+
Sbjct: 422 SQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDM 480
Query: 329 FYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV-- 383
A W+PDLFM+RV + G W+LF PS L D +G EFE Y+ YE++ G K+
Sbjct: 481 NTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFETAYTAYEDKVARGEIKLFKK 540
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAV 443
I A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E AV
Sbjct: 541 IPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAV 600
Query: 444 CNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVN 503
CNL S+ L +++E+ D ++L + L+ +ID+N
Sbjct: 601 CNLGSVNLVAHLKEQA---------------DGTVALDHDKLKRTISVAMRMLDNVIDIN 645
Query: 504 HYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASA 563
+Y + R SNL+HRP+G+GI G D +L P+ SPEA + E + Y+A AS
Sbjct: 646 YYAVAKARNSNLKHRPVGLGIMGFQDCLHVLRTPYASPEAVEFADRSMEAVCYYAYYAST 705
Query: 564 ELAVKDGPYETYFGSPMSKGILQVD-----------MWNITPSDRWDWSSLREMISKNGV 612
ELA + G Y +Y GS +GIL D + S+ DW +LR I+ G+
Sbjct: 706 ELAEERGRYSSYRGSLWDRGILPQDSVALLAEARGGYVEVDSSESMDWPALRSRIATYGM 765
Query: 613 RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSH 672
RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL GLW
Sbjct: 766 RNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDE 825
Query: 673 ALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHME 732
+ + Y +G++S+I IP +L+AIY T +E+ LV+ A+ R +IDQ+QSLNI+M
Sbjct: 826 VMVADLKYFDGTLSRIDRIPADLRAIYATAFEVDPVWLVESASRRQKWIDQAQSLNIYMA 885
Query: 733 QPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 886 GASGKKLDEIYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 929
>gi|167618619|ref|ZP_02387250.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis Bt4]
Length = 953
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 309/767 (40%), Positives = 430/767 (56%), Gaps = 47/767 (6%)
Query: 36 PVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------I 89
P + + +Y GV TQ+ + A A M P Y+ + R+ + + + +
Sbjct: 188 PEPIVAETVKNLYDGVPMTQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILGEEV 247
Query: 90 TKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
T+ S + + + KR G +A L+ D + + +K L A+ RD F Y G +
Sbjct: 248 TQAEMSTRYAEYFPQFLKR-GVEAELLDDKLLQFDLKR---LGDALDASRDLQFGYLGLQ 303
Query: 150 TLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLF 206
TL Y L +D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLF
Sbjct: 304 TLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYNVLSSFDFMSSTPTLF 363
Query: 207 NAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTN 266
N+GT + QLSSC+L + DD ++GIY+ LK A++SK AGG+G +RA GS+I GTN
Sbjct: 364 NSGTRRSQLSSCYLTTVADD-LDGIYEALKDNALLSKFAGGLGNDWTRVRALGSHIKGTN 422
Query: 267 GSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRAR 326
G S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 423 GKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTH 481
Query: 327 DLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV 383
D+ A W+PDLFM+RV + W+LF PS L D +G EFE Y YEE+ G K+
Sbjct: 482 DMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLY 541
Query: 384 --ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEET 441
I A++LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E
Sbjct: 542 KKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEI 601
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L V+ L D L D E+L + L+ +ID
Sbjct: 602 AVCNLGSVNL--------------VAHLAKQADGSYAL-DEEKLKRTVSVAMRMLDNVID 646
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A A
Sbjct: 647 INYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWA 706
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMISKN 610
S ELA + G Y +Y GS +GIL D + R DW +LR I
Sbjct: 707 STELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSATLDWPALRARIDSF 766
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLW 670
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L++DL E GLW
Sbjct: 767 GMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLW 826
Query: 671 SHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIH 730
+ + Y +G +S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLNI+
Sbjct: 827 DEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIY 886
Query: 731 MEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 887 MAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 932
>gi|167837967|ref|ZP_02464826.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis MSMB43]
Length = 956
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 309/769 (40%), Positives = 432/769 (56%), Gaps = 47/769 (6%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK----- 88
+P + + +Y GV TQ+ + + A M P Y+ + RV + + +
Sbjct: 186 VNPEPIVAETVKNLYDGVPMTQVYDSSILAARTMIEKDPAYSQVTARVLLHTIRREILGE 245
Query: 89 -ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFG 147
+T+ + + + + KR G +A L+ D + + +K L A+ RD F Y G
Sbjct: 246 EVTQAEMATRYAEYFPQFLKR-GVEAELLDDKLLQFDLKR---LGDALDASRDLQFGYLG 301
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPT 204
+TL Y L +D +E PQ MRV++G+ ++ D A++ Y+++S F +TPT
Sbjct: 302 LQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYNVLSSFDFMSSTPT 361
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT + QLSSC+L + DD ++GIY+ LK A++SK AGG+G +RA GS+I G
Sbjct: 362 LFNSGTRRSQLSSCYLTTVADD-LDGIYEALKDNALLSKFAGGLGNDWTRVRALGSHIKG 420
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 421 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRR 479
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAK 381
D+ A W+PDLFM+RV + G W+LF PS L D +G EFE Y YEE+ G K
Sbjct: 480 THDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYVGYEEKVARGEIK 539
Query: 382 MV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPE 439
+ I A++LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S
Sbjct: 540 LFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDA 599
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
E AVCNL S+ L V+ L D L D E+L + L+ +
Sbjct: 600 EIAVCNLGSVNL--------------VAHLAKQADGTYAL-DEEKLKRTVSVAMRMLDNV 644
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
ID+N+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A
Sbjct: 645 IDINYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASGEAVEFADRSMEAVCYYAY 704
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMIS 608
AS ELA + G Y +Y GS +GIL D + R DW +LR I
Sbjct: 705 WASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSATLDWPALRARID 764
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L++DL E G
Sbjct: 765 SFGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERG 824
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LW + + Y +G +S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLN
Sbjct: 825 LWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLN 884
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
I+M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 885 IYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 932
>gi|416907777|ref|ZP_11931087.1| ribonucleotide-diphosphate reductase subunit alpha, partial
[Burkholderia sp. TJI49]
gi|325528899|gb|EGD05935.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
sp. TJI49]
Length = 963
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 313/798 (39%), Positives = 445/798 (55%), Gaps = 52/798 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G P+ + + A + GL +P + + +Y GV +Q+ + A A
Sbjct: 162 NGVTRPLDLNALRALVVSACDGLGAA-VNPDPIVAETVKNLYDGVPMSQVYDSAILAART 220
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVAD 118
M P Y+ + R+ LH I + E + +M Y + + G A L+ D
Sbjct: 221 MIEKDPAYSQVTARIL---LHTIRREILGEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDD 277
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + +K L A+ RD F Y G +TL Y L + +E PQ MRV++G+
Sbjct: 278 KLLQFDLKR---LGDALDASRDLQFGYLGLQTLYDRYFLHVGGTRIEMPQAFFMRVAMGL 334
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+ L
Sbjct: 335 SLNEIDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEAL 393
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 394 KENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 452
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + G+W+LF PS
Sbjct: 453 AVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGEWTLFSPST 512
Query: 356 ASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G EFE Y+ YEE+ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 513 CPDLHDKFGAEFEAAYTAYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDP 572
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ LV
Sbjct: 573 CNIRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHLV 618
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 619 KQADGSYAL-DHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDC 677
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 678 LHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTL 737
Query: 591 N-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ S+ DW++LR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 738 KLLAEARGGYVEVDSSESLDWTALRARIAAHGMRNSNCVAIAPTATISNIIGVSACIEPT 797
Query: 640 TSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AIY
Sbjct: 798 FQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIY 857
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
T +E+ LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYLR
Sbjct: 858 ATAFEVDPTWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLR 916
Query: 760 TRAAADAIKFTVDTSVLN 777
T AA K TV LN
Sbjct: 917 TMAATHVEKSTVAHGALN 934
>gi|167920555|ref|ZP_02507646.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei BCC215]
Length = 952
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 308/767 (40%), Positives = 430/767 (56%), Gaps = 47/767 (6%)
Query: 36 PVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------I 89
P + + +Y GV TQ+ + + A M P Y+ + R+ + + + +
Sbjct: 188 PEPIVAETVKNLYDGVPMTQVYDSSILAARTMIEKDPAYSQVTARILLHTIRREILGEEV 247
Query: 90 TKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
T+ + + + + KR G +A L+ D + + +K L A+ RD F Y G +
Sbjct: 248 TQAEMTTRYAEYFPQFLKR-GVEAELLDDKLLQFDLKR---LGDALDASRDLQFGYLGLQ 303
Query: 150 TLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLF 206
TL Y L +D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLF
Sbjct: 304 TLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYNVLSSFDFMSSTPTLF 363
Query: 207 NAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTN 266
N+GT + QLSSC+L + DD ++GIY+ LK A++SK AGG+G +RA GS+I GTN
Sbjct: 364 NSGTRRSQLSSCYLTTVADD-LDGIYEALKDNALLSKFAGGLGNDWTRVRALGSHIKGTN 422
Query: 267 GSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRAR 326
G S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 423 GKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTH 481
Query: 327 DLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV 383
D+ A W+PDLFM+RV + W+LF PS L D +G EFE Y YEE+ G K+
Sbjct: 482 DMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLF 541
Query: 384 --ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEET 441
I A++LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E
Sbjct: 542 KKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEI 601
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L V+ L D L D E+L + L+ +ID
Sbjct: 602 AVCNLGSVNL--------------VAHLAKQADGSYAL-DEEKLKRTVSVAMRMLDNVID 646
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + YHA A
Sbjct: 647 INYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASDEAVEFADRSMEAVCYHAYWA 706
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMISKN 610
S ELA + G Y +Y GS +GIL D + R DW +LR I
Sbjct: 707 STELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSATLDWPALRARIDSF 766
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLW 670
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L++DL E GLW
Sbjct: 767 GMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLW 826
Query: 671 SHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIH 730
+ + Y +G +S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLNI+
Sbjct: 827 DEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIY 886
Query: 731 MEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 887 MAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 932
>gi|424902823|ref|ZP_18326336.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis MSMB43]
gi|390930696|gb|EIP88097.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis MSMB43]
Length = 965
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 309/768 (40%), Positives = 432/768 (56%), Gaps = 47/768 (6%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------ 88
+P + + +Y GV TQ+ + + A M P Y+ + RV + + +
Sbjct: 157 NPEPIVAETVKNLYDGVPMTQVYDSSILAARTMIEKDPAYSQVTARVLLHTIRREILGEE 216
Query: 89 ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGF 148
+T+ + + + + KR G +A L+ D + + +K L A+ RD F Y G
Sbjct: 217 VTQAEMATRYAEYFPQFLKR-GVEAELLDDKLLQFDLKR---LGDALDASRDLQFGYLGL 272
Query: 149 KTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTL 205
+TL Y L +D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTL
Sbjct: 273 QTLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYNVLSSFDFMSSTPTL 332
Query: 206 FNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGT 265
FN+GT + QLSSC+L + DD ++GIY+ LK A++SK AGG+G +RA GS+I GT
Sbjct: 333 FNSGTRRSQLSSCYLTTVADD-LDGIYEALKDNALLSKFAGGLGNDWTRVRALGSHIKGT 391
Query: 266 NGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRA 325
NG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 392 NGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRT 450
Query: 326 RDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKM 382
D+ A W+PDLFM+RV + G W+LF PS L D +G EFE Y YEE+ G K+
Sbjct: 451 HDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKL 510
Query: 383 V--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEE 440
I A++LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E
Sbjct: 511 FKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAE 570
Query: 441 TAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKII 500
AVCNL S+ L V+ L D L D E+L + L+ +I
Sbjct: 571 IAVCNLGSVNL--------------VAHLAKQADGTYAL-DEEKLKRTVSVAMRMLDNVI 615
Query: 501 DVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALK 560
D+N+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A
Sbjct: 616 DINYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASGEAVEFADRSMEAVCYYAYW 675
Query: 561 ASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMISK 609
AS ELA + G Y +Y GS +GIL D + R DW +LR I
Sbjct: 676 ASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSATLDWPALRARIDS 735
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGL 669
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L++DL E GL
Sbjct: 736 FGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGL 795
Query: 670 WSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNI 729
W + + Y +G +S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLNI
Sbjct: 796 WDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNI 855
Query: 730 HMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
+M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 856 YMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 902
>gi|375107585|ref|ZP_09753846.1| ribonucleoside-diphosphate reductase, alpha subunit
[Burkholderiales bacterium JOSHI_001]
gi|374668316|gb|EHR73101.1| ribonucleoside-diphosphate reductase, alpha subunit
[Burkholderiales bacterium JOSHI_001]
Length = 972
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 303/805 (37%), Positives = 453/805 (56%), Gaps = 58/805 (7%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKE-HCDPVLVAQKVCAGVYKGVTTTQLDEL 59
++V R G++ P+ F + A ++ GL E +P+L + +Y GV ++ +
Sbjct: 147 LHVTDR-GQRVPLDFAALQALVESSCAGLGAEVKAEPILAETR--RNLYDGVPIDEVYKA 203
Query: 60 AAETAAAMTVNHPDYALLAGRVAVSNLHK------ITKNSFSETIKDMYNYYNKRSGKKA 113
A A + P Y R+ + + K +T+ + + + + K+ +
Sbjct: 204 AILAARTLIEKDPAYTRATARLLLHTVRKEIVGEELTQAQMATRYAEYFPQFIKKGIEAE 263
Query: 114 SLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMR 173
L A ++ + A L AI +RD FDY G +TL Y + +D R +E PQ MR
Sbjct: 264 RLDA----KMAQFDLAALGAAIQPERDMQFDYLGLQTLYDRYFIHVDERRIEMPQAFFMR 319
Query: 174 VSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
V++G+ ++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++G
Sbjct: 320 VAMGLALNEIDREARAIEFYNVLSTFDFMSSTPTLFNSGTQRSQLSSCYLTTVADD-LDG 378
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY+ LK+ A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 379 IYEALKENALLSKFAGGLGNDWTRVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 438
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + G W+L
Sbjct: 439 -KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWTL 497
Query: 351 FCPSDASGLADSWGIEFEHLYSQYE---EEGRAKMV--ISARKLWFEILNSQIETGTPYM 405
F PS L D +G +FE Y+ YE + G K+ + A+ LW ++L ETG P++
Sbjct: 498 FSPSTCPDLHDKFGADFEAAYTAYEAKADRGELKLFKRVPAKDLWRKMLTMLFETGHPWV 557
Query: 406 LFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSN 465
FKD+CN +S QQ+ G + SSNLCTEI +S E AVCNL S+ L +++++ +
Sbjct: 558 TFKDACNVRSPQQHAGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLAQHLKDGSI----- 612
Query: 466 VSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQ 525
D ++L + L+ +ID+N+Y ++ R SNLRHRP+G+GI
Sbjct: 613 ---------------DHDKLKKTVATAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGIM 657
Query: 526 GLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGIL 585
G D L LP+ S EA + E + YHA AS++LA + G Y +Y GS +GIL
Sbjct: 658 GFQDALYQLRLPYASAEAVEFADRSMEAVCYHAYAASSDLAAERGRYSSYRGSLWDRGIL 717
Query: 586 QVDMWNITPSDR-------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
D ++ R DW +LR I+++G+RNS VA PTA+ S I+G
Sbjct: 718 PHDTLDLLAQARGGAEFVQVDRSATLDWDALRARIAQHGMRNSNCVAIAPTATISNIIGV 777
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
+ EP N+ + LSGEF +VN++L++DL +LGLW + + + +GS+ +I +P
Sbjct: 778 DASIEPCFGNLSVKSNLSGEFTIVNEYLVRDLKKLGLWDDVMVMDLKHFDGSLRRIDRVP 837
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
E+KA+Y T +E+ + LV+ AA R +IDQ+QSLNI++ KL ++ AW +G+K
Sbjct: 838 PEVKALYATAFEVDAQWLVEAAARRQKWIDQAQSLNIYLAGASGKKLDEIYKLAWLRGLK 897
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN 777
T YYLRT A A K TV +N
Sbjct: 898 T-TYYLRTMGATHAEKSTVSAGSMN 921
>gi|270156778|ref|ZP_06185435.1| ribonucleotide-diphosphate reductase alpha subunit [Legionella
longbeachae D-4968]
gi|289164773|ref|YP_003454911.1| ribonucleoside-diphosphate reductase, alpha subunit [Legionella
longbeachae NSW150]
gi|269988803|gb|EEZ95057.1| ribonucleotide-diphosphate reductase alpha subunit [Legionella
longbeachae D-4968]
gi|288857946|emb|CBJ11806.1| putative ribonucleoside-diphosphate reductase, alpha subunit
[Legionella longbeachae NSW150]
Length = 941
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 311/803 (38%), Positives = 443/803 (55%), Gaps = 57/803 (7%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG +P+ +++ + + L EH D V + +Y + + A
Sbjct: 147 DGELKPLDTERMDTIVHEACRNL--EHVDAEPVIKDALRNLYNEAKFADVHKALIMAART 204
Query: 67 MTVNHPDYALLAGRVA-----VSNLHK--ITKNSFSETIKDMYNYYNK---RSGKKASLV 116
+ P+Y ++ R+ + LHK I ++ + + +Y Y K G K ++
Sbjct: 205 LVEKEPNYTYVSARLLLDCLRIEALHKLGIEADATFDEMSQLYPAYFKIYVAHGIKQGML 264
Query: 117 ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSV 176
+ + + ++ L A++ +RD F Y +TL Y + E PQ MRV++
Sbjct: 265 DEKMADFDLEK---LGKALLPERDMKFTYLSLQTLYDRYFIHDQGIRYELPQAFFMRVAM 321
Query: 177 GI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYD 233
G+ KD + A++ Y L+S + +TPTLFN+GT +PQLSSC+L + D ++GIY
Sbjct: 322 GLAIREKDKNEKAIEFYQLLSSFDYMSSTPTLFNSGTIRPQLSSCYLTTVPD-HLDGIYS 380
Query: 234 TLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKR 293
+K A++SK AGG+G +RA GS+I GTNG S G+VP L V + TA V+QGG KR
Sbjct: 381 AIKDNALLSKYAGGLGNDWTPVRAMGSHIKGTNGKSQGVVPFLNVADATAVAVNQGG-KR 439
Query: 294 KGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCP 353
KGA YLE WH D+ EFL+LRKN G + R D+ ALW+PDLFM RVR+D W+LF P
Sbjct: 440 KGAVCAYLECWHKDVEEFLELRKNTGDDRRRTHDMNTALWIPDLFMMRVREDADWTLFSP 499
Query: 354 SDASGLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETGTPYMLFK 408
+ L D +G FE LY++YEE+ ++ +SA KLW ++L+ ETG P+M FK
Sbjct: 500 DEVPELHDQFGKAFEALYNKYEEKAHQGLMKNVKTVSAVKLWRKMLSMLFETGHPWMTFK 559
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D CN +S QQ+ G + SSNLCTEI +S EE AVCNL SI LP ++
Sbjct: 560 DPCNLRSPQQHCGVVHSSNLCTEITLNTSEEEIAVCNLGSINLPAHI------------- 606
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
KN D E+L + K L+ +ID+N+Y + R SNL+HRP+G+G+ G
Sbjct: 607 -------KNGKLDIEKLKQTIKTAVRMLDNVIDINYYSVPQARNSNLKHRPVGLGLMGFQ 659
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D L + + S EA + E I Y+A++AS +LA + G Y +Y GS SKGIL +D
Sbjct: 660 DALYELKIDYASEEAVEFADSSMELISYYAIEASCDLAKERGSYSSYEGSLWSKGILPID 719
Query: 589 MWNITP-----------SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
N+ S R DW SLR + G+RNS ++A PTA+ S I G + E
Sbjct: 720 SINLLQQARNKYLEQDRSQRLDWESLRIKVRTQGMRNSNVMAIAPTATISNICGVAQSIE 779
Query: 638 PYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKA 697
P N+Y + LSGEF V+N +L+ DL L LW + + Y NGSV IS IP +LK
Sbjct: 780 PTYQNLYVKSNLSGEFTVINPYLVADLKALELWDEVMVNDLKYFNGSVQPISRIPADLKK 839
Query: 698 IYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYY 757
Y T +EI LVD A+ R +IDQ+QSLNI+M +P KL L+ +AW +G+KT YY
Sbjct: 840 RYATSFEIDPIWLVDAASRRQKWIDQAQSLNIYMAEPSGKKLDQLYMHAWIRGLKT-TYY 898
Query: 758 LRTRAAADAIKFTVDTSVLNNEK 780
LR+ A++A K TV S LN K
Sbjct: 899 LRSMGASNAEKSTVTDSALNAVK 921
>gi|94312019|ref|YP_585229.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus
metallidurans CH34]
gi|93355871|gb|ABF09960.1| Ribonucleoside-diphosphate reductase alpha subunit [Cupriavidus
metallidurans CH34]
Length = 979
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 308/776 (39%), Positives = 440/776 (56%), Gaps = 50/776 (6%)
Query: 28 GLSKE-HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNL 86
GL K +P+L ++ +Y GV TQ+ + A A + P Y+ + R+ + +
Sbjct: 182 GLGKAVSAEPIL--KETLKNLYDGVPMTQVYDSAILAARTLIEKDPAYSQVTARILLHTI 239
Query: 87 HK------ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRD 140
K +T+ + + + + R G +A L+ + ++ + A L A+ RD
Sbjct: 240 RKEILGAEVTQTEMATKYAEYFPKFIAR-GIEAELLDE---KLATYDLARLGAALDASRD 295
Query: 141 FDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI---HKDDTDSALKTYHLMSQHW 197
F F+Y G +TL Y L +D +E PQ MRV++G+ KD A++ Y L+S
Sbjct: 296 FQFNYLGLQTLYDRYFLHVDEVRIEMPQAFFMRVAMGLALEEKDREARAIEFYQLLSSFD 355
Query: 198 FTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRA 257
F +TPTLFN+GT + QLSSC+L + DD +EGIY+ LK+ A++SK AGG+G N+RA
Sbjct: 356 FMSSTPTLFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRA 414
Query: 258 SGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKN 317
GS+I GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN
Sbjct: 415 LGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKN 473
Query: 318 QGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE 377
G + R D+ A W+PDLFM+RV ++G+W+LF P+ L D G FE Y YE +
Sbjct: 474 TGDDRRRTHDMNTANWIPDLFMKRVMENGEWTLFSPASCPDLHDKVGKAFEQAYLGYEAK 533
Query: 378 ---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEI 432
G K+ + A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI
Sbjct: 534 AANGELKLFKKVPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEI 593
Query: 433 VEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKII 492
++ E AVCNL S+ L V+ L+ D + D +L + +
Sbjct: 594 TLNTNESEIAVCNLGSVNL--------------VAHLMQQADG-TYVLDHAKLQKTIRTA 638
Query: 493 TENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFE 552
L+ +ID+N+Y +E R SNLRHRP+G+GI G D +L P+ S A + E
Sbjct: 639 MRMLDNVIDINYYAVEKARNSNLRHRPVGMGIMGFQDCLHVLRTPYASDAAVKFADTSME 698
Query: 553 TIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWS 601
+ Y+A +AS ELA + G Y TY GS +GIL D + +R DW
Sbjct: 699 AVCYYAYQASTELAEERGRYSTYEGSLWDRGILPQDSLKLLAEERGGYLDVDLSSTMDWD 758
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
SLR I ++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L+
Sbjct: 759 SLRGRIKQHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLV 818
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
+DL E GLW + + Y +GS+++I IP++L+ IY T +E++ LV+ A+ R +I
Sbjct: 819 RDLKERGLWDEVMVADLKYFDGSLARIDRIPQDLRDIYATAFEVEPTWLVEAASRRQKWI 878
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
DQ+QSLNI+M KL + AW +G+KT YYLRT AA K TV LN
Sbjct: 879 DQAQSLNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTVQRGSLN 933
>gi|145588392|ref|YP_001154989.1| ribonucleotide-diphosphate reductase subunit alpha
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145046798|gb|ABP33425.1| ribonucleoside-diphosphate reductase, alpha subunit
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 993
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 306/814 (37%), Positives = 453/814 (55%), Gaps = 60/814 (7%)
Query: 33 HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK--IT 90
H D + + +Y GV Q+ + A + + P ++ + R+ + + K +
Sbjct: 201 HIDATPIITETIKNLYDGVPMAQVYDSAILASRTLIEKDPAFSQVTARILMHVIRKEILG 260
Query: 91 KNSFSETIKDMYNYYNKR---SGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFG 147
K ++ Y Y + G A L+ + E + A A+ RD F+Y G
Sbjct: 261 KEVLQGDMQSEYGTYFAKYINEGISAELLDPRMREFDLPRLAA---ALNASRDLQFNYLG 317
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPT 204
+TL Y L ++ R +E PQ MRV++G+ ++ D A++ Y ++S F +TPT
Sbjct: 318 LQTLYDRYFLHIEDRRIEMPQAFFMRVAMGLSLNELDRERRAIEFYEILSTFDFMSSTPT 377
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+ T +PQLSSC+L ++DD ++GIY+ LK+ A++SK AGG+G N+RA GS+I G
Sbjct: 378 LFNSATTRPQLSSCYLTTVEDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 436
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 437 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 495
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEG-RAKMV 383
D+ + W+PDLFM+RV ++G W+LF PS+ L D +G FE Y YE++ R ++
Sbjct: 496 THDMNTSNWIPDLFMKRVMENGDWTLFSPSNTPDLHDKYGKAFEEAYVAYEQKADRGELK 555
Query: 384 ----ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPE 439
I A++LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI ++
Sbjct: 556 PFRRIPAQQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHIGVVHSSNLCTEITLNTNET 615
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRL-FDFERLAEVTKIITENLNK 498
E AVCNL S+ L ++ + D+ +L D E+L + L+
Sbjct: 616 EIAVCNLGSVNLTAHM----------------TTDANGKLVLDHEKLQRTVRTAMRMLDN 659
Query: 499 IIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHA 558
+ID+N+Y + R SNL+HRP+G+GI G D + +P+ S EA + E + Y+A
Sbjct: 660 VIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHMQRIPYASEEAVKFADSSMEAVCYYA 719
Query: 559 LKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMI 607
+AS ELA + G Y TY GS +GIL D + +R DWS LR I
Sbjct: 720 YQASNELAEERGVYSTYTGSLWDRGILPQDSVALLAQERGGYLEVDNSSTMDWSGLRARI 779
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTEL 667
+ G+RNS VA PTA+ S I+G + C EP N++ + LSGEF VVN++L++DL +
Sbjct: 780 KQYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLFVKSNLSGEFTVVNEYLVRDLKDR 839
Query: 668 GLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSL 727
GLW + + Y +G++SKI IP++L+ +Y T +E++ LV+ A+ R +IDQ+QSL
Sbjct: 840 GLWDEVMIADLKYFDGTLSKIDRIPQDLRDLYATAFEVEPSWLVEAASRRQKWIDQAQSL 899
Query: 728 NIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADND 787
NI+M KL + AW +G+KT YYLRT AA K TV + LN+ + N
Sbjct: 900 NIYMGGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTVASGQLNSVSSGGGVNG 958
Query: 788 VEANLAQV---------VCSLK----NQEECMAC 808
+A A VC+++ EEC AC
Sbjct: 959 TDATAASAAGGVEADGPVCTMRPGDAGFEECEAC 992
>gi|430808366|ref|ZP_19435481.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus sp.
HMR-1]
gi|429499277|gb|EKZ97715.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus sp.
HMR-1]
Length = 979
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 308/776 (39%), Positives = 440/776 (56%), Gaps = 50/776 (6%)
Query: 28 GLSKE-HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNL 86
GL K +P+L ++ +Y GV TQ+ + A A + P Y+ + R+ + +
Sbjct: 182 GLGKAVSAEPIL--KETLKNLYDGVPMTQVYDSAILAARTLIEKDPAYSQVTARILLHTI 239
Query: 87 HK------ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRD 140
K +T+ + + + + R G +A L+ + ++ + A L A+ RD
Sbjct: 240 RKEILGAEVTQTEMATKYAEYFPKFIAR-GIEAELLDE---KLATYDLARLGAALDASRD 295
Query: 141 FDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI---HKDDTDSALKTYHLMSQHW 197
F F+Y G +TL Y L +D +E PQ MRV++G+ KD A++ Y L+S
Sbjct: 296 FQFNYLGLQTLYDRYFLHVDEVRIEMPQAFFMRVAMGLALEEKDREARAIEFYQLLSSFD 355
Query: 198 FTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRA 257
F +TPTLFN+GT + QLSSC+L + DD +EGIY+ LK+ A++SK AGG+G N+RA
Sbjct: 356 FMSSTPTLFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRA 414
Query: 258 SGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKN 317
GS+I GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN
Sbjct: 415 LGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKN 473
Query: 318 QGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE 377
G + R D+ A W+PDLFM+RV ++G+W+LF P+ L D G FE Y YE +
Sbjct: 474 TGDDRRRTHDMNTANWIPDLFMKRVMENGEWTLFSPASCPDLHDKVGKAFEQAYLGYEAK 533
Query: 378 ---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEI 432
G K+ + A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI
Sbjct: 534 AANGELKLFKKVPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEI 593
Query: 433 VEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKII 492
++ E AVCNL S+ L V+ L+ D + D +L + +
Sbjct: 594 TLNTNESEIAVCNLGSVNL--------------VAHLMQQADG-TYVLDHAKLQKTIRTA 638
Query: 493 TENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFE 552
L+ +ID+N+Y +E R SNLRHRP+G+GI G D +L P+ S A + E
Sbjct: 639 MRMLDNVIDINYYAVEKARNSNLRHRPVGMGIMGFQDCLHVLRTPYASDAAVKFADTSME 698
Query: 553 TIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWS 601
+ Y+A +AS ELA + G Y TY GS +GIL D + +R DW
Sbjct: 699 AVCYYAYQASTELAEERGRYSTYEGSLWDRGILPQDSLKLLAEERGGYLEVDLSSTMDWD 758
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
SLR I ++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L+
Sbjct: 759 SLRGRIKQHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLV 818
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
+DL E GLW + + Y +GS+++I IP++L+ IY T +E++ LV+ A+ R +I
Sbjct: 819 RDLKERGLWDEVMVADLKYFDGSLARIDRIPQDLRDIYATAFEVEPTWLVEAASRRQKWI 878
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
DQ+QSLNI+M KL + AW +G+KT YYLRT AA K TV LN
Sbjct: 879 DQAQSLNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTVQRGSLN 933
>gi|340783272|ref|YP_004749879.1| ribonucleotide reductase of class Ia (aerobic) subunit alpha
[Acidithiobacillus caldus SM-1]
gi|340557423|gb|AEK59177.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Acidithiobacillus caldus SM-1]
Length = 945
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 308/796 (38%), Positives = 451/796 (56%), Gaps = 37/796 (4%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKE-HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAA 65
DG ++P+ +++ + + GL + D +L Q +Y G++ +L +
Sbjct: 142 DGSEQPLDLERLRQVIGEACSGLGEAVSVDAIL--QATQRNLYDGISEAELFQAPILACR 199
Query: 66 AMTVNHPDYALLAGRVAVSNLHK--ITKNSFSETIKDMYNYYNK---RSGKKASLVADDV 120
+ P YA R+ + + + + + + + Y Y K R+G + L+ +
Sbjct: 200 VLIEQDPAYAHATARLLLDRVRREVLGEPATHAEMAQRYPEYFKDYLRTGIQHELLDPRL 259
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ + A A+ +RD DF Y G + L Y L + R +E PQ MRV++G+
Sbjct: 260 AQFDLDRIAA---ALRPERDLDFQYLGLQILYDRYFLHVRERRIELPQAFWMRVAMGLAL 316
Query: 181 DDTD---SALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
++ D A+ Y ++S+ F +TPTLFNAGT +PQLSSCFL + DD ++GIY+ +K
Sbjct: 317 EEIDREEQAIAFYEVLSRFEFVSSTPTLFNAGTLRPQLSSCFLTTVADD-LDGIYEAIKD 375
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
A++SK +GG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 376 NALLSKYSGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAV 434
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
YLE WH DI EFL+LRKN G + R D+ A W+PDLFMERV +G+W+LF P++ +
Sbjct: 435 CAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMERVEANGQWTLFSPNEVA 494
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETGTPYMLFKDSCN 412
L D G F+ Y YE A + + A +LW ++L ETG P++ FKD CN
Sbjct: 495 DLHDLTGQAFKERYEHYERLADAGEITLFKRLPALQLWRKMLTMLFETGHPWITFKDPCN 554
Query: 413 RKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
+S QQ++G + SSNLCTEI +S +E AVCNL S+ L ++R G+P Q ++ S
Sbjct: 555 LRSPQQHVGVVHSSNLCTEITLNTSDKEIAVCNLGSVNLVAHLR-AGLPGQGLRTE--AS 611
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D L D ++LA ++ L+ +ID+N+Y + R SNLRHRP+G+G+ G +D +
Sbjct: 612 ADELLALVDTDKLARTVRVAMRMLDNVIDMNYYAVAKARNSNLRHRPVGLGLMGFSDALL 671
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-- 590
L +P+ S A + E I YHA+ ASA+LA + G Y ++ GS S+GIL +D
Sbjct: 672 ALRIPYASQAAVEFADISQELISYHAIDASADLARERGSYRSFPGSLWSQGILPLDSIEL 731
Query: 591 ---------NITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTS 641
++ S R DW SLR + K G+RNS +A PTA+ S I+G ++ EP
Sbjct: 732 LARSRVAGVDVDRSQRLDWESLRTKV-KGGMRNSNCLAIAPTATISNIVGVSQGIEPIYQ 790
Query: 642 NIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKT 701
N+Y + LSGEF VVN +L++DL LW + + Y +GSV I IPE LK +Y
Sbjct: 791 NLYVKSNLSGEFTVVNAYLVRDLKAADLWDEVMVNDLKYFDGSVVPIDRIPEALKPLYAN 850
Query: 702 VWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTR 761
+EI + LV+ AA R ++DQSQSLN++ QP K+ + AW +G+KT YYLR+
Sbjct: 851 AFEIDPQWLVEAAARRQKWLDQSQSLNLYFGQPSGKKIDETYRLAWRRGLKT-TYYLRSL 909
Query: 762 AAADAIKFTVDTSVLN 777
A A K TV VLN
Sbjct: 910 GATAAEKSTVSKGVLN 925
>gi|241664220|ref|YP_002982580.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia
pickettii 12D]
gi|240866247|gb|ACS63908.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
pickettii 12D]
Length = 994
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 304/771 (39%), Positives = 439/771 (56%), Gaps = 47/771 (6%)
Query: 32 EHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK--- 88
+ DP + ++ +Y+GV TQ+ + A + + P Y+ + R+ + + +
Sbjct: 184 DAVDPEPILKETVKNLYEGVPMTQVYDSAILASRTLIEKDPAYSQVTARILLHTIRREIL 243
Query: 89 ---ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDY 145
+T+ S D + + KR G A L+ D + + + A L A+ RDF F+Y
Sbjct: 244 GEEVTQAEMSTRYVDYFPQFIKR-GINAELLDDKLAQF---DLARLGAALDASRDFQFNY 299
Query: 146 FGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHAT 202
G +TL Y L ++ +E PQ MRV++G+ ++ D A++ Y L+S F +T
Sbjct: 300 LGLQTLYDRYFLHINETRIEMPQAFFMRVAMGLALNEIDREARAIEFYQLLSSFDFMSST 359
Query: 203 PTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYI 262
PTLFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G N+RA GS+I
Sbjct: 360 PTLFNSGTRRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 418
Query: 263 HGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEE 322
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 419 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 477
Query: 323 CRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GR 379
R D+ A W+PDLFM+RV + G+W+LF PS L D G FE Y YE++ G
Sbjct: 478 RRTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKVGKAFEQAYLAYEDKVARGE 537
Query: 380 AKMV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSS 437
K+ + A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI ++
Sbjct: 538 IKLFKKMPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 597
Query: 438 PEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLN 497
E AVCNL S+ L V+ LV D + + D E+L + + L+
Sbjct: 598 DSEIAVCNLGSVNL--------------VAHLVKQADG-SVVLDHEKLKKTVRTAMRMLD 642
Query: 498 KIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYH 557
+ID+N+Y ++ R SNLRHRP+G+GI G D +L +P+ S A Q E + Y+
Sbjct: 643 NVIDINYYAVKKARDSNLRHRPVGMGIMGFQDALHVLRVPYASEAAVQFADTSMEAVCYY 702
Query: 558 ALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREM 606
A AS ELA + G Y +Y GS +GIL D + +R DW SLR
Sbjct: 703 AYWASTELAEERGRYSSYKGSLWDRGILPQDSLKLLAEERGGYLEADMSSTMDWDSLRGR 762
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTE 666
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL
Sbjct: 763 IKQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKA 822
Query: 667 LGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQS 726
GLW + + Y +GS+++I IP++L+ +Y T +E++ + LV+ A+ R +IDQ+QS
Sbjct: 823 RGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQS 882
Query: 727 LNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
LNI+M KL + AW +G+KT YYLRT A K TV LN
Sbjct: 883 LNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTLN 932
>gi|107021672|ref|YP_619999.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
cenocepacia AU 1054]
gi|116688618|ref|YP_834241.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
cenocepacia HI2424]
gi|170731917|ref|YP_001763864.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
cenocepacia MC0-3]
gi|105891861|gb|ABF75026.1| Ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia AU 1054]
gi|116646707|gb|ABK07348.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia HI2424]
gi|169815159|gb|ACA89742.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia MC0-3]
Length = 1001
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 311/770 (40%), Positives = 439/770 (57%), Gaps = 53/770 (6%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSF 94
DP+ VA+ V +Y GV +Q+ + A A M P Y+ + R+ LH I +
Sbjct: 190 DPI-VAETV-KNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 244
Query: 95 SETI--KDMYNYYNK------RSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYF 146
E + +M Y + + G A L+ D + + +K L A+ +RD F Y
Sbjct: 245 GEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLLQFDLKR---LGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATP 203
G +TL Y L ++ +E PQ MRV++G+ ++ D A++ Y+++S F +TP
Sbjct: 302 GLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRA 380
R D+ A W+PDLFM+RV + G W+LF PS L D +G +FE Y+ YE++ G
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGADFEKAYTAYEDKVARGEI 539
Query: 381 KMV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSP 438
K+ I A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S
Sbjct: 540 KLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 EETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNK 498
E AVCNL S+ L V+ LV D L D ++L + L+
Sbjct: 600 TEIAVCNLGSVNL--------------VAHLVKQADGSYAL-DHDKLKRTISVAMRMLDN 644
Query: 499 IIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHA 558
+ID+N+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A
Sbjct: 645 VIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASQEAVEFADRSMEAVCYYA 704
Query: 559 LKASAELAVKDGPYETYFGSPMSKGILQVDMWN-----------ITPSDRWDWSSLREMI 607
AS ELA + G Y +Y GS +GIL D + S+ DW++LR I
Sbjct: 705 YHASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDTSESLDWTALRARI 764
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTEL 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L++DL E
Sbjct: 765 ATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 824
Query: 668 GLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSL 727
GLW + + Y +G +S+I IP +L+AIY T +E+ LV+ A+ R +IDQ+QSL
Sbjct: 825 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSL 884
Query: 728 NIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
NI+M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 885 NIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 933
>gi|83719828|ref|YP_441700.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis E264]
gi|257137869|ref|ZP_05586131.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis E264]
gi|83653653|gb|ABC37716.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
thailandensis E264]
Length = 995
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 309/767 (40%), Positives = 430/767 (56%), Gaps = 47/767 (6%)
Query: 36 PVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------I 89
P + + +Y GV TQ+ + A A M P Y+ + R+ + + + +
Sbjct: 188 PEPIVAETVKNLYDGVPMTQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILGEEV 247
Query: 90 TKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
T+ S + + + KR G +A L+ D + + +K L A+ RD F Y G +
Sbjct: 248 TQAEMSTRYAEYFPQFLKR-GVEAELLDDKLLQFDLKR---LGDALDASRDLQFGYLGLQ 303
Query: 150 TLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLF 206
TL Y L +D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLF
Sbjct: 304 TLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYNVLSSFDFMSSTPTLF 363
Query: 207 NAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTN 266
N+GT + QLSSC+L + DD ++GIY+ LK A++SK AGG+G +RA GS+I GTN
Sbjct: 364 NSGTRRSQLSSCYLTTVADD-LDGIYEALKDNALLSKFAGGLGNDWTRVRALGSHIKGTN 422
Query: 267 GSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRAR 326
G S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 423 GKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTH 481
Query: 327 DLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV 383
D+ A W+PDLFM+RV + W+LF PS L D +G EFE Y YEE+ G K+
Sbjct: 482 DMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLY 541
Query: 384 --ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEET 441
I A++LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E
Sbjct: 542 KKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEI 601
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L V+ L D L D E+L + L+ +ID
Sbjct: 602 AVCNLGSVNL--------------VAHLAKQADGSYAL-DEEKLKRTVSVAMRMLDNVID 646
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A A
Sbjct: 647 INYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWA 706
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMISKN 610
S ELA + G Y +Y GS +GIL D + R DW +LR I
Sbjct: 707 STELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSATLDWPALRARIDSF 766
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLW 670
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L++DL E GLW
Sbjct: 767 GMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLW 826
Query: 671 SHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIH 730
+ + Y +G +S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLNI+
Sbjct: 827 DEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIY 886
Query: 731 MEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 887 MAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 932
>gi|309783063|ref|ZP_07677782.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia sp.
5_7_47FAA]
gi|404397127|ref|ZP_10988920.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia sp.
5_2_56FAA]
gi|308918171|gb|EFP63849.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia sp.
5_7_47FAA]
gi|348610686|gb|EGY60372.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia sp.
5_2_56FAA]
Length = 994
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 304/771 (39%), Positives = 439/771 (56%), Gaps = 47/771 (6%)
Query: 32 EHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK--- 88
E DP + ++ +Y+GV TQ+ + A + + P Y+ + R+ + + +
Sbjct: 184 EAVDPEPILKETVKNLYEGVPMTQVYDSAILASRTLIEKDPAYSQVTARILLHTIRREIL 243
Query: 89 ---ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDY 145
+T+ S D + + +R G A L+ D + + + A L A+ RDF F+Y
Sbjct: 244 GEEVTQAEMSTRYVDYFPQFIER-GINAELLDDKLAQF---DLARLGAALDASRDFQFNY 299
Query: 146 FGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHAT 202
G +TL Y L ++ +E PQ MRV++G+ ++ D A++ Y L+S F +T
Sbjct: 300 LGLQTLYDRYFLHINETRIEMPQAFFMRVAMGLALNEIDREARAIEFYQLLSSFDFMSST 359
Query: 203 PTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYI 262
PTLFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G N+RA GS+I
Sbjct: 360 PTLFNSGTRRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 418
Query: 263 HGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEE 322
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 419 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 477
Query: 323 CRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GR 379
R D+ A W+PDLFM+RV + G+W+LF PS L D G FE Y YE++ G
Sbjct: 478 RRTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKVGKAFEQAYLAYEDKVARGE 537
Query: 380 AKMV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSS 437
K+ + A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI ++
Sbjct: 538 IKLFKKMPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 597
Query: 438 PEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLN 497
E AVCNL S+ L V+ LV D + + D E+L + + L+
Sbjct: 598 DSEIAVCNLGSVNL--------------VAHLVKQPDG-SVVLDHEKLKKTVRTAMRMLD 642
Query: 498 KIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYH 557
+ID+N+Y ++ R SNLRHRP+G+GI G D +L +P+ S A Q E + Y+
Sbjct: 643 NVIDINYYAVKKARDSNLRHRPVGMGIMGFQDALHVLRVPYASEAAVQFADTSMEAVCYY 702
Query: 558 ALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREM 606
A AS ELA + G Y +Y GS +GIL D + +R DW SLR
Sbjct: 703 AYWASTELAEERGRYSSYKGSLWDRGILPQDSLKLLAEERGGYLEADMSSTMDWDSLRGR 762
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTE 666
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL
Sbjct: 763 IKQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKA 822
Query: 667 LGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQS 726
GLW + + Y +GS+++I IP++L+ +Y T +E++ + LV+ A+ R +IDQ+QS
Sbjct: 823 RGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQS 882
Query: 727 LNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
LNI+M KL + AW +G+KT YYLRT A K TV LN
Sbjct: 883 LNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTLN 932
>gi|254483512|ref|ZP_05096739.1| ribonucleoside-diphosphate reductase, alpha subunit, putative
[marine gamma proteobacterium HTCC2148]
gi|214036233|gb|EEB76913.1| ribonucleoside-diphosphate reductase, alpha subunit, putative
[marine gamma proteobacterium HTCC2148]
Length = 958
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 312/839 (37%), Positives = 453/839 (53%), Gaps = 69/839 (8%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
VI+ DG + + D++ + + + L E + + +Y GVT +L
Sbjct: 155 VIQPDGSRVALDLDRLHTVVSEACFEL--EDVVESAILDEALKNLYDGVTAEELATSLVI 212
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSF-----SETIKDMYNYYNKRSGKKASLVA 117
TA M P+Y+ +A R+ NL + SF + T DM Y K A +
Sbjct: 213 TARTMIEQDPNYSYVAARLLCDNL-RAEALSFLGVATNATQADMGQLYAK--ALPAYIAR 269
Query: 118 DDVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLM 172
E++ N A D A++ +RD F Y G +TL Y + D E PQ M
Sbjct: 270 GIELELLSPNLAGYDLQRLGEALLPERDLQFTYLGLQTLYDRYFIHSDETRFELPQVFFM 329
Query: 173 RVSVGIHKDDT---DSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
RV++G+ ++ D A++ Y L+S + +TPTLFNAGT +PQLSSC+L + DD +
Sbjct: 330 RVAMGLAAEEANRNDRAIEFYELLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LH 388
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
GIY ++ A++SK AGG+G +RA G+YI GTNG S GIVP L+V NDTA V+QG
Sbjct: 389 GIYGAIQDNAMLSKFAGGLGNDWTPVRALGAYIKGTNGKSQGIVPFLKVVNDTAVAVNQG 448
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G KRKGA YLE WH D+ EF++LRKN G + R D+ A W+PDLFM+RV + W+
Sbjct: 449 G-KRKGAVCAYLETWHMDVEEFVELRKNTGDDRRRTHDMNTANWIPDLFMKRVFNGEDWT 507
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETGTPY 404
LF PSD L D +G+ FE Y+ YE A + + A LW ++L ETG P+
Sbjct: 508 LFSPSDVPDLHDLYGVAFEQRYAHYEAMAAAGEIKLFKTVKAENLWRKMLGMLFETGHPW 567
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
M FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL S+ LP+++ E G+
Sbjct: 568 MTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSVNLPQHIDENGL---- 623
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
+ E+L + L+ +ID+N+Y + + SNL HRP+G+G+
Sbjct: 624 ----------------NLEKLRNTVRTAVRMLDNVIDINYYSVPQAKNSNLMHRPVGLGL 667
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L + S +A E I Y+A++AS+ELA + G Y +Y GS S+G+
Sbjct: 668 MGFQDALYKQHLAYGSEQAVSFADHSMEAISYYAIEASSELAAERGAYSSYEGSLWSQGV 727
Query: 585 LQVDMWN------------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
+D + ++ DW +LR + +NG+RNS ++A PTA+ + I G
Sbjct: 728 FPIDSLQRLIDERGADYIQVDQTESMDWQALRSQVQQNGMRNSNVMAIAPTATIANITGV 787
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF VVN +L++DL E GLW + + Y +GSV I IP
Sbjct: 788 SQSIEPTYQNLYVKSNLSGEFTVVNPYLVRDLKERGLWDGVMVNDLKYYDGSVQAIDRIP 847
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
++K IY T +E++ + LVD A+ R +IDQ+QSLN+++ + KL + AW G+K
Sbjct: 848 ADIKGIYSTAFEVEPRWLVDAASRRQKWIDQAQSLNLYINNANGKKLDITYRMAWYSGLK 907
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN---NEKANRADNDVEANLAQVVCSLKNQEECMAC 808
T YYLR+ AA K T+DT LN NE A A CSL + +C AC
Sbjct: 908 T-TYYLRSLAATGTEKSTIDTGTLNAVSNEAAGPAP-------VPQACSL-DDPDCEAC 957
>gi|445499258|ref|ZP_21466113.1| ribonucleoside-diphosphate reductase subunit alpha
[Janthinobacterium sp. HH01]
gi|444789253|gb|ELX10801.1| ribonucleoside-diphosphate reductase subunit alpha
[Janthinobacterium sp. HH01]
Length = 975
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 302/801 (37%), Positives = 450/801 (56%), Gaps = 57/801 (7%)
Query: 4 IKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAET 63
+ +G ++P+ +++T + GL K H D + + +Y GV +L + A
Sbjct: 155 VLENGERKPLEMNRVTGLINAACIGLEK-HVDADAILAETLKNLYDGVPVEELHKSAILA 213
Query: 64 AAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIK------DMYNYYNKRSGKKASLVA 117
A A+ P Y+ + R+ LH I K F + + + Y+ + K +A
Sbjct: 214 ARALMEKDPAYSQVTARIL---LHTIRKEVFGKEVAQAAAAAEYVTYFPQYIAKG---IA 267
Query: 118 DDVYEIIMK--NAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVS 175
+++ + + + A L A++ DRD F Y G +TL Y L + +E PQ MRV+
Sbjct: 268 NELLDTKLAEFDLARLAKALVADRDLQFGYIGLQTLYDRYFLHVRDVRIEMPQAFYMRVA 327
Query: 176 VGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIY 232
+G+ +++D A++ Y+L+S F +TPTLFN+GT + QLSSC+L + DD +EGIY
Sbjct: 328 MGLALNESDREARAIEFYNLLSTFDFMSSTPTLFNSGTLRSQLSSCYLTTVSDD-LEGIY 386
Query: 233 DTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGK 292
D +K+ A+++K AGG+G +RA G++I GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 387 DAIKENALLAKFAGGLGNDWTPVRALGAHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 445
Query: 293 RKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFC 352
RKGA YLE WH DI EFLDLRKN G + R D+ A W+PD+FM+RV + G+W+LF
Sbjct: 446 RKGAVCAYLETWHMDIEEFLDLRKNTGDDRRRTHDMNTANWIPDMFMKRVMEKGEWTLFS 505
Query: 353 PSDASGLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETGTPYMLF 407
PSD L D G FE Y YE + A + I+A LW ++L+ ETG P++ F
Sbjct: 506 PSDTPDLHDLVGKAFEKAYLGYEAKAAAGEIRVFKKIAALDLWRKMLSMLFETGHPWITF 565
Query: 408 KDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVS 467
KD CN +S Q ++G + SSNLCTEI + P+E AVCNL S+ +P +++E
Sbjct: 566 KDPCNIRSPQSHVGMVHSSNLCTEITLNTGPDEIAVCNLGSVNMPAHMKE---------G 616
Query: 468 KLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGL 527
KL D +L + + L+ +ID+N+Y ++ R +N+RHRP+G+G+ G
Sbjct: 617 KL-----------DHVKLKKTIRTAMRMLDNVIDINYYAVDKARNANMRHRPVGLGVMGF 665
Query: 528 ADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQV 587
D ++ +PF S EA E + Y+A AS ELA + G Y++Y GS +GIL
Sbjct: 666 QDCLHMMRIPFSSNEAVSFADTSMEAVCYYAYLASTELAEERGHYQSYKGSLWDRGILPQ 725
Query: 588 DMWNITPSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D + +R DW+ +R+ I K G+RNS VA PTA+ S I+G + C
Sbjct: 726 DSIKLLADERGGYLEQDTSAAMDWTPVRDRIKKFGMRNSNCVAIAPTATISNIIGVSACI 785
Query: 637 EPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELK 696
EP N+Y + LSGEF +N +L++DL LW + + + Y +GS++KI IP++L+
Sbjct: 786 EPTFQNLYVKSNLSGEFTEINAYLVRDLKARDLWDEVMISDLKYFDGSLAKIDRIPQDLR 845
Query: 697 AIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMY 756
IY T +E+ LV+ A+ R +IDQ+QSLNI+M KL + AW +G+KT Y
Sbjct: 846 DIYATAFEVSPTWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDETYKLAWLRGLKT-TY 904
Query: 757 YLRTRAAADAIKFTVDTSVLN 777
YLRT +A K T T LN
Sbjct: 905 YLRTTSATHTEKSTSKTGALN 925
>gi|120556761|ref|YP_961112.1| ribonucleotide-diphosphate reductase subunit alpha [Marinobacter
aquaeolei VT8]
gi|120326610|gb|ABM20925.1| ribonucleoside-diphosphate reductase, alpha subunit [Marinobacter
aquaeolei VT8]
Length = 949
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 321/837 (38%), Positives = 461/837 (55%), Gaps = 77/837 (9%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+ V K DG P+ + ++++ S GL + D ++ + +Y G+ T++
Sbjct: 160 LTVKKADGSIAPLDLGLMKQQVEQASTGLDGINGDSLV--EDALRNLYDGIEETEVLSAL 217
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSF----SETIKDMYNYYNKRSGKKASLV 116
TA PDY+ + R+ + L T + S + ++Y A +
Sbjct: 218 IMTARGRIEREPDYSAVTARLLLEQLRLETAEALDLPRSLPLAEIYP-----QALSAFIH 272
Query: 117 ADDVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHML 171
A YE++ + A D A+ +RD F + G +TL Y L + +E PQ
Sbjct: 273 AGIRYELLDEALAAFDLERLGNALKPERDLQFGFLGLQTLYDRYFLHWNKARLELPQVFF 332
Query: 172 MRVSVGI--HKDDTDS-ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSI 228
MRV++G+ +DD ++ A++ Y L+S + +TPTLFN+GT QLSSC+L + DD +
Sbjct: 333 MRVAMGLALREDDPNARAIEFYELLSSFDYMASTPTLFNSGTRHSQLSSCYLTTVGDD-L 391
Query: 229 EGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQ 288
EGIY ++ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+Q
Sbjct: 392 EGIYGAIRDNALLSKWAGGLGNDWTPVRALGSHIKGTNGQSQGVVPFLKVVNDTAVAVNQ 451
Query: 289 GGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKW 348
GG KRKGA YLE WH DI EFL+LRKN G E R D+ A WVPDL +ER+R+D +W
Sbjct: 452 GG-KRKGAVCAYLESWHLDIEEFLELRKNTGDERRRTHDMNTANWVPDLLIERMREDREW 510
Query: 349 SLFCPSDASGLADSWGIEFEHLYSQYE---EEGRAKMV--ISARKLWFEILNSQIETGTP 403
+LF PSD L D +G F Y YE E+G+ K+ I A++LW ++L ETG P
Sbjct: 511 TLFSPSDVPDLHDLYGNAFRERYQHYEALAEQGKIKLFKKIPAKQLWRKMLTVLFETGHP 570
Query: 404 YMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQ 463
++ FKD CN +S QQ+ G + SSNLCTEI +S +E AVCNL S+ L ++
Sbjct: 571 WITFKDPCNLRSPQQHQGVVHSSNLCTEITLNTSADEIAVCNLGSVNLAAHI-------- 622
Query: 464 SNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIG 523
K+ D RL L+ +ID+N Y + R SNL+HRP+G+G
Sbjct: 623 ------------KDGELDVTRLERTVNTAVRMLDNVIDINFYAVPQARNSNLKHRPVGLG 670
Query: 524 IQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKG 583
+ G D LGLP+ SPEA + E + Y AL+ASA LA + G Y+TY GS S+G
Sbjct: 671 LMGFQDALYQLGLPYSSPEAVEFADVAMEQLSYFALRASATLAGERGAYDTYEGSLWSQG 730
Query: 584 ILQVDM------------WNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILG 631
IL +D ++ + R DW+ +RE+I+KNG+RNS ++A PTA+ S I+G
Sbjct: 731 ILPMDSVGLLKDNRRDGDLSLNTNSRLDWTPVRELIAKNGMRNSNVMAIAPTATISNIVG 790
Query: 632 NNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEI 691
++ EP N++ + LSGEF VVN L++DL GLW + + + Y +GSV +I I
Sbjct: 791 VSQSIEPAYQNLFVKSNLSGEFTVVNPSLVRDLKAEGLWDNVMVNDLKYFDGSVQQIDRI 850
Query: 692 PEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGM 751
P ELKA Y T +EI + LV+ AA R ++DQ+QSLN++M +P KL +L+ AW +G+
Sbjct: 851 PAELKARYATAFEIDPRWLVEAAARRQKWLDQAQSLNLYMAEPSGKKLDALYQLAWERGL 910
Query: 752 KTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
KT YYLR+ A A K V A Q VCS+ N +C AC
Sbjct: 911 KT-TYYLRSLGATGAEKTA----------------PVSAPQPQ-VCSIDN-PDCEAC 948
>gi|83746811|ref|ZP_00943859.1| Ribonucleoside-diphosphate reductase alpha chain [Ralstonia
solanacearum UW551]
gi|207744362|ref|YP_002260754.1| ribonucleoside reductase 1 (large chain) (partial sequence n
terminus) protein [Ralstonia solanacearum IPO1609]
gi|83726580|gb|EAP73710.1| Ribonucleoside-diphosphate reductase alpha chain [Ralstonia
solanacearum UW551]
gi|206595767|emb|CAQ62694.1| ribonucleoside reductase 1 (large chain) (partial sequence n
terminus) protein [Ralstonia solanacearum IPO1609]
Length = 987
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 303/769 (39%), Positives = 438/769 (56%), Gaps = 49/769 (6%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------ 88
DP + ++ +Y+GV +Q+ + A A + P Y+ R+ + + +
Sbjct: 183 DPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREILGEE 242
Query: 89 ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEI-IMKNAACLDGAIIYDRDFDFDYFG 147
+T+ + D + + KR G A L+ D + + + K A LD + RD F+Y G
Sbjct: 243 VTQAEMAARYVDYFPQFIKR-GINAGLLDDTLAQFDLAKLGAALDAS----RDLQFNYLG 297
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPT 204
+TL Y L + + +E PQ MRV++G+ ++ D A++ YHL+S F +TPT
Sbjct: 298 LQTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAIEFYHLLSSFDFMSSTPT 357
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G N+RA GS+I G
Sbjct: 358 LFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 416
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 417 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 475
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE-GRAKMV 383
D+ A W+PDLFM+RV ++G+W+LF PS L D G FE Y YEE+ R ++
Sbjct: 476 THDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGRAFEQAYLGYEEKVARGEIT 535
Query: 384 I----SARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPE 439
+ A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI ++
Sbjct: 536 LFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDS 595
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
E AVCNL S+ L V+ LV D L D ++L + +I L+ +
Sbjct: 596 EIAVCNLGSVNL--------------VAHLVQQADGSYAL-DHDKLKKTVRIAMRMLDNV 640
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
ID+N+Y ++ R SNLRHRP+G+G+ G D +L +P+ + A Q E + Y+A
Sbjct: 641 IDINYYAVKKARDSNLRHRPVGLGVMGFQDALHVLRIPYANEAAVQFADTSMEAVCYYAY 700
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMIS 608
AS ELA + G Y TY GS +GIL D + +R DW SLR I
Sbjct: 701 WASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLEADLSSTMDWDSLRGRIQ 760
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
+ G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL G
Sbjct: 761 QYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKARG 820
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LW + + Y +GS+++I IP++L+ +Y T +E++ + LV+ A+ R +IDQ+QSLN
Sbjct: 821 LWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQSLN 880
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
I+M L + AW +G+KT YYLRT A K TV LN
Sbjct: 881 IYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTLN 928
>gi|444364598|ref|ZP_21164888.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia BC7]
gi|444365873|ref|ZP_21165977.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia K56-2Valvano]
gi|443592687|gb|ELT61473.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia BC7]
gi|443605444|gb|ELT73298.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia K56-2Valvano]
Length = 1001
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 311/798 (38%), Positives = 445/798 (55%), Gaps = 52/798 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G P+ + + A + GL +P + + +Y GV +Q+ + A A
Sbjct: 161 NGVTRPLDLNALRALIVSACDGLGAA-VNPDPIVAETVKNLYDGVPMSQVYDSAILAART 219
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVAD 118
M P Y+ + R+ LH I + E + +M Y + + G A L+ D
Sbjct: 220 MIEKDPAYSQVTARIL---LHTIRREILGEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDD 276
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + +K L A+ +RD F Y G +TL Y L +D +E PQ MRV++G+
Sbjct: 277 KLLQFDLKR---LGEALDANRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGL 333
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+ L
Sbjct: 334 SLNEIDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEAL 392
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 393 KENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 451
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + W+LF PS
Sbjct: 452 AVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPST 511
Query: 356 ASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G +FE Y+ YE++ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 512 CPDLHDKFGADFEKAYTAYEDKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDP 571
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ LV
Sbjct: 572 CNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHLV 617
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 618 KQADGSYAL-DHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDC 676
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 677 LHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTL 736
Query: 591 N-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ S+ DW++LR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 737 KLLTEARGGYVEVDTSESLDWTTLRSRIAAHGMRNSNCVAIAPTATISNIIGVSACIEPT 796
Query: 640 TSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AIY
Sbjct: 797 FQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIY 856
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
T +E+ LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYLR
Sbjct: 857 ATAFEVDPTWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLR 915
Query: 760 TRAAADAIKFTVDTSVLN 777
T AA K TV LN
Sbjct: 916 TMAATHVEKSTVAHGALN 933
>gi|421867552|ref|ZP_16299210.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Burkholderia cenocepacia H111]
gi|358072490|emb|CCE50088.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Burkholderia cenocepacia H111]
Length = 1001
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 311/798 (38%), Positives = 445/798 (55%), Gaps = 52/798 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G P+ + + A + GL +P + + +Y GV +Q+ + A A
Sbjct: 161 NGVTRPLDLNALRALIVSACDGLGAA-VNPDPIVAETVKNLYDGVPMSQVYDSAILAART 219
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVAD 118
M P Y+ + R+ LH I + E + +M Y + + G A L+ D
Sbjct: 220 MIEKDPAYSQVTARIL---LHTIRREILGEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDD 276
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + +K L A+ +RD F Y G +TL Y L +D +E PQ MRV++G+
Sbjct: 277 KLLQFDLKR---LGEALDANRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGL 333
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+ L
Sbjct: 334 SLNEIDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEAL 392
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 393 KENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 451
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + W+LF PS
Sbjct: 452 AVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPST 511
Query: 356 ASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G +FE Y+ YE++ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 512 CPDLHDKFGADFEKAYTAYEDKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDP 571
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ LV
Sbjct: 572 CNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHLV 617
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 618 KQADGSYAL-DHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDC 676
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 677 LHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTL 736
Query: 591 N-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ S+ DW++LR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 737 KLLTEARGGYVEVDTSESLDWTTLRSRIAAHGMRNSNCVAIAPTATISNIIGVSACIEPT 796
Query: 640 TSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AIY
Sbjct: 797 FQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIY 856
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
T +E+ LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYLR
Sbjct: 857 ATAFEVDPTWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLR 915
Query: 760 TRAAADAIKFTVDTSVLN 777
T AA K TV LN
Sbjct: 916 TMAATHVEKSTVAHGALN 933
>gi|187930115|ref|YP_001900602.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia
pickettii 12J]
gi|187727005|gb|ACD28170.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
pickettii 12J]
Length = 994
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 305/771 (39%), Positives = 437/771 (56%), Gaps = 47/771 (6%)
Query: 32 EHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK--- 88
E DP + ++ +Y+GV TQ+ + A + + P Y+ + R+ + + +
Sbjct: 184 EAVDPEPILKETVKNLYEGVPMTQVYDSAILASRTLIEKDPAYSQVTARILLHTIRREIL 243
Query: 89 ---ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDY 145
+T+ S D + + KR G A L+ D + + + A L A+ RDF F+Y
Sbjct: 244 GEEVTQAEMSTRYVDYFPQFIKR-GINAELLDDKLAQF---DLARLGAALDASRDFQFNY 299
Query: 146 FGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHAT 202
G +TL Y L + +E PQ MRV++G+ ++ D A++ Y L+S F +T
Sbjct: 300 LGLQTLYDRYFLHISETRIEMPQAFFMRVAMGLALNEIDREARAIEFYQLLSSFDFMSST 359
Query: 203 PTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYI 262
PTLFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G N+RA GS+I
Sbjct: 360 PTLFNSGTRRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 418
Query: 263 HGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEE 322
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 419 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 477
Query: 323 CRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GR 379
R D+ A W+PDLFM+RV + G+W+LF PS L D G FE Y YE++ G
Sbjct: 478 RRTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKVGKAFEQAYLAYEDKVARGE 537
Query: 380 AKMV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSS 437
K+ + A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI ++
Sbjct: 538 IKLFKKMPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 597
Query: 438 PEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLN 497
E AVCNL S+ L V+ LV D + + D E+L + + L+
Sbjct: 598 DSEIAVCNLGSVNL--------------VAHLVKQADG-SVVLDHEKLKKTVRTAMRMLD 642
Query: 498 KIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYH 557
+ID+N+Y ++ R SNLRHRP+G+GI G D +L +P+ S A Q E + Y+
Sbjct: 643 NVIDINYYAVKKARDSNLRHRPVGMGIMGFQDALHVLRVPYASDAAVQFADTSMEAVCYY 702
Query: 558 ALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREM 606
A AS ELA + G Y +Y GS +GIL D + +R DW SLR
Sbjct: 703 AYWASTELAEERGRYSSYKGSLWDRGILPQDSLKLLAEERGGYLEADMSSTMDWDSLRGR 762
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTE 666
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL
Sbjct: 763 IKQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKA 822
Query: 667 LGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQS 726
GLW + + Y +GS+++I IP++L+ +Y T +E++ LV+ A+ R +IDQ+QS
Sbjct: 823 RGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPLWLVEAASRRQKWIDQAQS 882
Query: 727 LNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
LNI+M KL + AW +G+KT YYLRT A K TV LN
Sbjct: 883 LNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTLN 932
>gi|338174004|ref|YP_004650814.1| ribonucleoside-diphosphate reductase subunit alpha [Parachlamydia
acanthamoebae UV-7]
gi|336478362|emb|CCB84960.1| ribonucleoside-diphosphate reductase subunit alpha [Parachlamydia
acanthamoebae UV-7]
Length = 951
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 302/794 (38%), Positives = 459/794 (57%), Gaps = 46/794 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV DG K P+ K+ ++++ KE C+P + +++ +Y GV +L+E A
Sbjct: 139 LYVTYPDGTKSPLNTQKMQSKMEHACADF-KELCNPQELIEEMLKHLYDGVLFKELNESA 197
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHK--ITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
+A + P Y +A R+ + +++ + + +++ + ++ +K +
Sbjct: 198 IFSARSKIEKEPAYNYVAARLLLQDIYNEVFEQECHPSEVANLHVSHFEQYIRKGVMAKR 257
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
E+ + L + RD F Y G +TL YL+ + + +E PQ+ MRV++G+
Sbjct: 258 LTPELFGYDLEKLAQNLDSSRDKLFTYIGVQTLYDRYLIHVKNDRIETPQYFWMRVAMGL 317
Query: 179 HKDDTDS----ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
++ ++ A++ Y+++SQ F +TPTLFN+G+ PQLSSC+L ++DD + I+
Sbjct: 318 ALNEKENREERAIEFYNVLSQFHFISSTPTLFNSGSLHPQLSSCYLSTVQDDLV-NIFKV 376
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG NIRA+G+ IHGTNG + G+VP L+V NDTA V+QGG KRK
Sbjct: 377 IADNASLSKWSGGIGNDWTNIRATGATIHGTNGLTQGVVPFLKVANDTAVAVNQGG-KRK 435
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI +F++LRKN G E R D+ A W+PDLFM+RVR+ W+LF PS
Sbjct: 436 GAVCAYLETWHLDIEDFVELRKNTGDERRRTHDMNTANWIPDLFMKRVREQSVWTLFNPS 495
Query: 355 DASGLADSWGIEFEHLYSQYE---EEGRAKM--VISARKLWFEILNSQIETGTPYMLFKD 409
D L D +GIEFE Y +YE +EG+ K+ VI A LW +++ ETG P+M FKD
Sbjct: 496 DTPDLHDLYGIEFEKRYCEYERLAQEGKIKLFKVIPAMDLWRKMITMLFETGHPWMTFKD 555
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
N +S Q + G + SSNLCTEI+ +S ETAVCNL SI L ++
Sbjct: 556 PSNIRSPQSHAGVVHSSNLCTEILLNTSENETAVCNLGSINLAAHI-------------- 601
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
K D + LA+ + L+ +ID+N+YP + R SNLRHRP+G+G+ G D
Sbjct: 602 ------KGDFLDEQFLAKTIRTAMRMLDNVIDINYYPTKEARESNLRHRPVGLGLMGFQD 655
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
+ ++S EA + E I YHA+ AS ELA + G Y +Y GS S+GIL +D
Sbjct: 656 ALYHFRIAYDSQEAVEFADASMEMISYHAILASTELAKERGVYSSYRGSKWSQGILPIDS 715
Query: 590 WNITPSDRW-----------DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
+ ++R DWS +R+ I K+G+RN +A PTA+ + I G ++ EP
Sbjct: 716 IALLDNERKGYLHMDRTSKKDWSVVRKEIQKHGMRNCNTMAIAPTATIAHISGLSQSIEP 775
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
S +Y + LSGEF V+N+ L+KDL E LW+ + ++ Y +GSV +I + PE+LK +
Sbjct: 776 TFSLLYVKSNLSGEFAVLNEWLVKDLKERDLWNQDMLDELKYYDGSVQEIEQFPEDLKGL 835
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
YKT +EI+ K L++ A+ R +ID QSLN+++ PD KL+ ++ AW KG+KT YYL
Sbjct: 836 YKTAFEIEPKWLIECASRRQKWIDMGQSLNLYVNAPDGRKLSDMYLLAWEKGLKT-TYYL 894
Query: 759 RTRAAADAIKFTVD 772
R++AA K T+D
Sbjct: 895 RSKAATQVEKSTLD 908
>gi|282890381|ref|ZP_06298909.1| hypothetical protein pah_c016o113 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499763|gb|EFB42054.1| hypothetical protein pah_c016o113 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 921
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 302/794 (38%), Positives = 459/794 (57%), Gaps = 46/794 (5%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+YV DG K P+ K+ ++++ KE C+P + +++ +Y GV +L+E A
Sbjct: 109 LYVTYPDGTKSPLNTQKMQSKMEHACADF-KELCNPQELIEEMLKHLYDGVLFKELNESA 167
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHK--ITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
+A + P Y +A R+ + +++ + + +++ + ++ +K +
Sbjct: 168 IFSARSKIEKEPAYNYVAARLLLQDIYNEVFEQECHPSEVANLHVSHFEQYIRKGVMAKR 227
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
E+ + L + RD F Y G +TL YL+ + + +E PQ+ MRV++G+
Sbjct: 228 LTPELFGYDLEKLAQNLDSSRDKLFTYIGVQTLYDRYLIHVKNDRIETPQYFWMRVAMGL 287
Query: 179 HKDDTDS----ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
++ ++ A++ Y+++SQ F +TPTLFN+G+ PQLSSC+L ++DD + I+
Sbjct: 288 ALNEKENREERAIEFYNVLSQFHFISSTPTLFNSGSLHPQLSSCYLSTVQDDLV-NIFKV 346
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG NIRA+G+ IHGTNG + G+VP L+V NDTA V+QGG KRK
Sbjct: 347 IADNASLSKWSGGIGNDWTNIRATGATIHGTNGLTQGVVPFLKVANDTAVAVNQGG-KRK 405
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI +F++LRKN G E R D+ A W+PDLFM+RVR+ W+LF PS
Sbjct: 406 GAVCAYLETWHLDIEDFVELRKNTGDERRRTHDMNTANWIPDLFMKRVREQSVWTLFNPS 465
Query: 355 DASGLADSWGIEFEHLYSQYE---EEGRAKM--VISARKLWFEILNSQIETGTPYMLFKD 409
D L D +GIEFE Y +YE +EG+ K+ VI A LW +++ ETG P+M FKD
Sbjct: 466 DTPDLHDLYGIEFEKRYCEYERLAQEGKIKLFKVIPAMDLWRKMITMLFETGHPWMTFKD 525
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
N +S Q + G + SSNLCTEI+ +S ETAVCNL SI L ++
Sbjct: 526 PSNIRSPQSHAGVVHSSNLCTEILLNTSENETAVCNLGSINLAAHI-------------- 571
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
K D + LA+ + L+ +ID+N+YP + R SNLRHRP+G+G+ G D
Sbjct: 572 ------KGDFLDEQFLAKTIRTAMRMLDNVIDINYYPTKEARESNLRHRPVGLGLMGFQD 625
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
+ ++S EA + E I YHA+ AS ELA + G Y +Y GS S+GIL +D
Sbjct: 626 ALYHFRIAYDSQEAVEFADASMEMISYHAILASTELAKERGVYSSYRGSKWSQGILPIDS 685
Query: 590 WNITPSDRW-----------DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
+ ++R DWS +R+ I K+G+RN +A PTA+ + I G ++ EP
Sbjct: 686 IALLDNERKGYLHMDRTSKKDWSVVRKEIQKHGMRNCNTMAIAPTATIAHISGLSQSIEP 745
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
S +Y + LSGEF V+N+ L+KDL E LW+ + ++ Y +GSV +I + PE+LK +
Sbjct: 746 TFSLLYVKSNLSGEFAVLNEWLVKDLKERDLWNQDMLDELKYYDGSVQEIEQFPEDLKGL 805
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
YKT +EI+ K L++ A+ R +ID QSLN+++ PD KL+ ++ AW KG+KT YYL
Sbjct: 806 YKTAFEIEPKWLIECASRRQKWIDMGQSLNLYVNAPDGRKLSDMYLLAWEKGLKT-TYYL 864
Query: 759 RTRAAADAIKFTVD 772
R++AA K T+D
Sbjct: 865 RSKAATQVEKSTLD 878
>gi|255019899|ref|ZP_05291974.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Acidithiobacillus caldus ATCC 51756]
gi|254970679|gb|EET28166.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Acidithiobacillus caldus ATCC 51756]
Length = 945
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 308/796 (38%), Positives = 451/796 (56%), Gaps = 37/796 (4%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKE-HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAA 65
DG ++P+ +++ + + GL + D +L Q +Y G++ +L +
Sbjct: 142 DGSEQPLDLERLRQVIGEACSGLGEAVSVDAIL--QATQRNLYDGISEEELFQAPILACR 199
Query: 66 AMTVNHPDYALLAGRVAVSNLHK--ITKNSFSETIKDMYNYYNK---RSGKKASLVADDV 120
+ P YA R+ + + + + + + + Y Y K R+G + L+ +
Sbjct: 200 VLIEQDPAYAHATARLLLDRVRREVLGEPATHAEMAQRYPEYFKDYLRTGIQHELLDPRL 259
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ + A A+ +RD DF Y G + L Y L + R +E PQ MRV++G+
Sbjct: 260 AQFDLDRIAA---ALRPERDLDFQYLGLQILYDRYFLHVRERRIELPQAFWMRVAMGLAL 316
Query: 181 DDTD---SALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
++ D A+ Y ++S+ F +TPTLFNAGT +PQLSSCFL + DD ++GIY+ +K
Sbjct: 317 EEIDREEQAIAFYEVLSRFEFVSSTPTLFNAGTLRPQLSSCFLTTVADD-LDGIYEAIKD 375
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
A++SK +GG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 376 NALLSKYSGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAV 434
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
YLE WH DI EFL+LRKN G + R D+ A W+PDLFMERV +G+W+LF P++ +
Sbjct: 435 CAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMERVEANGQWTLFSPNEVA 494
Query: 358 GLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETGTPYMLFKDSCN 412
L D G F+ Y YE A + + A +LW ++L ETG P++ FKD CN
Sbjct: 495 DLHDLTGQAFKERYEHYERLADAGEITLFKRLPALQLWRKMLTMLFETGHPWITFKDPCN 554
Query: 413 RKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
+S QQ++G + SSNLCTEI +S +E AVCNL S+ L ++R G+P Q ++ S
Sbjct: 555 LRSPQQHVGVVHSSNLCTEITLNTSDKEIAVCNLGSVNLVAHLR-AGLPGQGLRTE--AS 611
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D L D ++LA ++ L+ +ID+N+Y + R SNLRHRP+G+G+ G +D +
Sbjct: 612 ADELLALVDTDKLARTVRVAMRMLDNVIDMNYYAVAKARNSNLRHRPVGLGLMGFSDALL 671
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-- 590
L +P+ S A + E I YHA+ ASA+LA + G Y ++ GS S+GIL +D
Sbjct: 672 ALRIPYASQAAVEFADISQELISYHAIDASADLARERGSYRSFPGSLWSQGILPLDSIEL 731
Query: 591 ---------NITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTS 641
++ S R DW SLR + K G+RNS +A PTA+ S I+G ++ EP
Sbjct: 732 LARSRVAGVDVDRSQRLDWESLRTKV-KGGMRNSNCLAIAPTATISNIVGVSQGIEPIYQ 790
Query: 642 NIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKT 701
N+Y + LSGEF VVN +L++DL LW + + Y +GSV I IPE LK +Y
Sbjct: 791 NLYVKSNLSGEFTVVNAYLVRDLKAADLWDEVMVNDLKYFDGSVVPIDRIPEALKPLYAN 850
Query: 702 VWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTR 761
+EI + LV+ AA R ++DQSQSLN++ QP K+ + AW +G+KT YYLR+
Sbjct: 851 AFEIDPQWLVEAAARRQKWLDQSQSLNLYFGQPSGKKIDETYRLAWRRGLKT-TYYLRSL 909
Query: 762 AAADAIKFTVDTSVLN 777
A A K TV VLN
Sbjct: 910 GATAAEKSTVSKGVLN 925
>gi|206561766|ref|YP_002232531.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
cenocepacia J2315]
gi|198037808|emb|CAR53752.1| putative ribonucleoside reductase [Burkholderia cenocepacia J2315]
Length = 1003
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 311/798 (38%), Positives = 445/798 (55%), Gaps = 52/798 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G P+ + + A + GL +P + + +Y GV +Q+ + A A
Sbjct: 163 NGVTRPLDLNALRALIVSACDGLGAA-VNPDPIVAETVKNLYDGVPMSQVYDSAILAART 221
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVAD 118
M P Y+ + R+ LH I + E + +M Y + + G A L+ D
Sbjct: 222 MIEKDPAYSQVTARIL---LHTIRREILGEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDD 278
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + +K L A+ +RD F Y G +TL Y L +D +E PQ MRV++G+
Sbjct: 279 KLLQFDLKR---LGEALDANRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGL 335
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+ L
Sbjct: 336 SLNEIDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEAL 394
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 395 KENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 453
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + W+LF PS
Sbjct: 454 AVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPST 513
Query: 356 ASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G +FE Y+ YE++ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 514 CPDLHDKFGADFEKAYTAYEDKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDP 573
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ LV
Sbjct: 574 CNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHLV 619
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 620 KQADGSYAL-DHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDC 678
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 679 LHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTL 738
Query: 591 N-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ S+ DW++LR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 739 KLLTEARGGYVEVDTSESLDWTTLRSRIAAHGMRNSNCVAIAPTATISNIIGVSACIEPT 798
Query: 640 TSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AIY
Sbjct: 799 FQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIY 858
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
T +E+ LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYLR
Sbjct: 859 ATAFEVDPTWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLR 917
Query: 760 TRAAADAIKFTVDTSVLN 777
T AA K TV LN
Sbjct: 918 TMAATHVEKSTVAHGALN 935
>gi|167904348|ref|ZP_02491553.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei NCTC 13177]
Length = 956
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 307/767 (40%), Positives = 430/767 (56%), Gaps = 47/767 (6%)
Query: 36 PVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------I 89
P + + +Y GV TQ+ + + A M P Y+ + R+ + + + +
Sbjct: 188 PEPIVAETVKNLYDGVPMTQVYDSSILAARTMIEKDPAYSQVTARILLHTIRREILGEEV 247
Query: 90 TKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
T+ + + + + KR G +A L+ D + + +K L A+ RD F Y G +
Sbjct: 248 TQAEMTTRYAEYFPQFLKR-GVEAELLDDKLLQFDLKR---LGDALDASRDLQFGYLGLQ 303
Query: 150 TLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLF 206
TL Y L +D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLF
Sbjct: 304 TLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYNVLSSFDFMSSTPTLF 363
Query: 207 NAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTN 266
N+GT + QLSSC+L + DD ++GIY+ LK A++SK AGG+G +RA GS+I GTN
Sbjct: 364 NSGTRRSQLSSCYLTTVADD-LDGIYEALKDNALLSKFAGGLGNDWTRVRALGSHIKGTN 422
Query: 267 GSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRAR 326
G S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 423 GKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTH 481
Query: 327 DLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV 383
D+ A W+PDLFM+RV + W+LF PS L D +G EFE Y YEE+ G K+
Sbjct: 482 DMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLF 541
Query: 384 --ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEET 441
I A++LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E
Sbjct: 542 KKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEI 601
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L V+ L D L D E+L + L+ +ID
Sbjct: 602 AVCNLGSVNL--------------VAHLAKQADGSYAL-DEEKLKRTVSVAMRMLDNVID 646
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A A
Sbjct: 647 INYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWA 706
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMISKN 610
S ELA + G Y +Y GS +GIL D + R DW +LR I
Sbjct: 707 STELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSATLDWPALRARIDSF 766
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLW 670
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L++DL E GLW
Sbjct: 767 GMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLW 826
Query: 671 SHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIH 730
+ + Y +G +S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLNI+
Sbjct: 827 DEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIY 886
Query: 731 MEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 887 MAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 932
>gi|113869189|ref|YP_727678.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia
eutropha H16]
gi|113527965|emb|CAJ94310.1| Ribonucleoside-diphosphate reductase alpha subunit [Ralstonia
eutropha H16]
Length = 977
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 306/769 (39%), Positives = 436/769 (56%), Gaps = 49/769 (6%)
Query: 34 CDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK----- 88
+P+L ++ +Y GV TQ+ + A A + PDY+ + R+ + + K
Sbjct: 187 AEPIL--KETLKNLYDGVPMTQVYDSAILAARTLIEKDPDYSQVTARILLHTIRKEILGT 244
Query: 89 -ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFG 147
+T+ S + + + R G +A L+ + ++ + A L A+ RDF F+Y G
Sbjct: 245 EVTQAEMSTRYAEYFPKFIAR-GIEAELLDE---QLATFDLARLGAALDAGRDFQFNYLG 300
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGI---HKDDTDSALKTYHLMSQHWFTHATPT 204
+TL Y L +D +E PQ MRV++G+ KD A++ Y L+S F +TPT
Sbjct: 301 LQTLYDRYFLHIDETRIEMPQAFFMRVAMGLALNEKDREARAIEFYQLLSSFDFMSSTPT 360
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT + QLSSC+L + DD +EGIY+ LK+ A++SK AGG+G N+RA GS+I G
Sbjct: 361 LFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 419
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 420 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 478
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAK 381
D+ A W+PDLFM+RV + G+W+LF P+ L D G EFE Y YE + G K
Sbjct: 479 THDMNTANWIPDLFMKRVMEGGEWTLFSPATCPDLHDKVGKEFEKAYLGYEAKAASGELK 538
Query: 382 MV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPE 439
+ + A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI ++
Sbjct: 539 LFKKLPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNES 598
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
E AVCNL S+ L V+ + D L D +L + + L+ +
Sbjct: 599 EIAVCNLGSVNL--------------VAHMAKQADGTYAL-DHAKLQKTVRTAMRMLDNV 643
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
ID+N+Y ++ R SNLRHRP+G+GI G D +L P+ S A + E + Y+A
Sbjct: 644 IDINYYAVDKARNSNLRHRPVGMGIMGFQDCLHVLRTPYSSDAAVKFADTSMEAVCYYAY 703
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMIS 608
AS ELA + G Y +Y GS +GIL D + +R DW +LR I
Sbjct: 704 HASTELAEERGRYSSYEGSLWDRGILPQDSLKLLAEERGGYLDVDMSATMDWDALRARIK 763
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL E G
Sbjct: 764 QHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKERG 823
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LW + + Y +GS+S+I IP++L+ IY T +E++ LV+ A+ R +IDQ+QSLN
Sbjct: 824 LWDEVMVADLKYFDGSLSRIDRIPQDLRDIYATAFEVEPTWLVEAASRRQKWIDQAQSLN 883
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
I+M KL + AW +G+KT YYLRT AA K TV LN
Sbjct: 884 IYMAGASGKKLDDTYKLAWVRGLKT-TYYLRTMAATHVEKSTVSRGSLN 931
>gi|82703583|ref|YP_413149.1| ribonucleotide-diphosphate reductase subunit alpha [Nitrosospira
multiformis ATCC 25196]
gi|82411648|gb|ABB75757.1| Ribonucleoside-diphosphate reductase [Nitrosospira multiformis ATCC
25196]
Length = 956
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 310/837 (37%), Positives = 465/837 (55%), Gaps = 63/837 (7%)
Query: 4 IKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAET 63
+ DGR+ P+ ++ A + GL E DP L+ + +Y GV ++ + +
Sbjct: 150 VLEDGRRVPLDTARLLALIGSCCEGLG-EGVDPALILKATLKDLYDGVPMEEVRKSVILS 208
Query: 64 AAAMTVNHPDYALLAGRVAVSNLH------KITKNSFSETIKDMYNYYNKRSGKKASLVA 117
A A+ P Y+ + R+ + +L +I + + + + + KR G +A L+
Sbjct: 209 ARALLEKEPAYSYVTARLLLHSLRFEVLGEEIVQREMAGRYMEYFPAFIKR-GIEAELLD 267
Query: 118 DDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
+ + + + A A+ +RD F Y G +TL Y L + R +E PQ MRV++G
Sbjct: 268 ERLAQFDLPRLA---QALHAERDLKFGYLGLQTLYDRYFLHIQERRIELPQAFFMRVAMG 324
Query: 178 IHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ ++ D A++ YH++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+
Sbjct: 325 LALNEIDREARAIEFYHVLSNFDFMSSTPTLFNSGTRRSQLSSCYLTTVPDD-LDGIYEG 383
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+K+ A+++K AGG+G +RA GS+I GTNG S G+VP L+V +DTA V+QGG KRK
Sbjct: 384 IKENALLAKYAGGLGNDWTRVRAMGSHIKGTNGKSQGVVPFLKVVSDTAVAVNQGG-KRK 442
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EFL+LRKN G + R D+ A WVPDLFM+RV + G+W+LF PS
Sbjct: 443 GAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTATWVPDLFMKRVMEGGEWTLFSPS 502
Query: 355 DASGLADSWGIEFEHLYSQYEEE-GRAKM----VISARKLWFEILNSQIETGTPYMLFKD 409
D L + +G FE Y YE++ R ++ I A +LW ++L+ ETG P++ FKD
Sbjct: 503 DVPDLHEKYGKAFEQAYLAYEDKVARGELDLYKTIPAVQLWRKMLSMLFETGHPWITFKD 562
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
+CN +S Q ++G + SSNLCTEI ++ +E AVCNL SI L ++ + G
Sbjct: 563 ACNIRSPQNHIGVVHSSNLCTEITLNTNDQEIAVCNLGSINLAAHIDDGGK--------- 613
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
D ++L + L+ +ID+N Y + R SNLRHRP+G+GI G D
Sbjct: 614 ----------LDADKLKRTVSLAMRMLDNVIDINFYAVAKARNSNLRHRPVGLGIMGFQD 663
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
+ +P+ S EA + E + YHA AS ELA + G Y +Y GS +GIL D
Sbjct: 664 CLHRMRIPYASDEAVEFADRTMEAMAYHAYWASTELAEERGRYASYRGSLWDRGILPQDT 723
Query: 590 WNITPSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
++ +R DW +LRE I +G+RNS +A PTA+ S I+G + EP
Sbjct: 724 LDLLQEERGGYIEADRSSTLDWEALRERIRNHGMRNSNCLAIAPTATISNIVGVSASIEP 783
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N+Y + LSGEF + N++L+ DL +LGLW + + I Y +G++ KI +P EL+ +
Sbjct: 784 TFKNLYVKSNLSGEFTIANQYLVSDLKKLGLWDEVMISDIKYFDGALGKIDRVPTELRKL 843
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +E++ + L++ AA R +IDQSQSLNI++ KL + AW +G+KT YYL
Sbjct: 844 YATAFEVEPQWLIEAAARRQKWIDQSQSLNIYIASVSGKKLDETYKLAWVRGLKT-TYYL 902
Query: 759 RTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVV-------CSLKNQEECMAC 808
R+ A A K TV LN A A+ + A A V CS+ + EC +C
Sbjct: 903 RSLGATSAEKSTVQAGSLN---AVPAEGSLPAMGAAAVPATDVSFCSV-DDPECESC 955
>gi|268316002|ref|YP_003289721.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodothermus
marinus DSM 4252]
gi|262333536|gb|ACY47333.1| ribonucleoside-diphosphate reductase, alpha subunit [Rhodothermus
marinus DSM 4252]
Length = 926
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 315/834 (37%), Positives = 457/834 (54%), Gaps = 58/834 (6%)
Query: 5 KRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETA 64
+ DG + P + + AR++ GL + DP LV +++ VY G+ +LD A
Sbjct: 120 RADGTEAPFPHEALRARIEAACDGL--DDVDPELVREELLRTVYPGIPEDELDRALILAA 177
Query: 65 AAMTVNHPDYALLAGRVAVSNLHK------ITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
PDY +A R+ + L++ I + +E + + Y + + L
Sbjct: 178 RTHIEREPDYTYVAARLLLDALYREVFGRPIPPSEQAEACRAGFRAYLEHGVRLGRL--- 234
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLL-KMDSRVVERPQHMLMRVSVG 177
D + + L A+ +RD F + G +TL YLL + + R E PQ++ MRV++G
Sbjct: 235 DERLLRTFDIDRLAAALHPERDRRFTFLGLQTLYDRYLLHEPEGRRFELPQYLWMRVAMG 294
Query: 178 I---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ D T A++ Y L+S F ++TPTLFNAGTP PQLSSC+L ++DD + I+
Sbjct: 295 LALAEDDPTARAIQFYELLSSFRFMNSTPTLFNAGTPHPQLSSCYLTTVQDD-LGAIFKA 353
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
++ A++SK AGG+G +RA G++I GTNG S G++P L++ NDTA V+QGG KRK
Sbjct: 354 IRDNALLSKWAGGLGNDWTPVRALGAHIRGTNGRSQGVIPFLKIVNDTAVAVNQGG-KRK 412
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EFL+LR+N G E R D+ A W+PDLFM+RVR+ W+LF P
Sbjct: 413 GAVCAYLEVWHLDIEEFLELRRNTGDERRRTHDMNTACWIPDLFMQRVRERKHWTLFSPD 472
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETGTPYMLFKD 409
+ L D +G F Y YE E A + I A LW ++L+ ETG P++ FKD
Sbjct: 473 EVPDLHDLYGRAFRERYEHYEREAEAGRIRNWRRIEAVALWRKMLSMLFETGHPWLTFKD 532
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
CN +S Q ++G + SSNLCTEI +SPEE AVCNL SI L +V E+G
Sbjct: 533 PCNIRSPQDHVGVVHSSNLCTEITLNTSPEEVAVCNLGSINLVAHVDEQGE--------- 583
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
D E+L + + L+ +ID+N YPI R SNLRHRPIG+G+ G D
Sbjct: 584 ----------LDREKLRDTIRTAVRMLDNVIDLNFYPIPEARTSNLRHRPIGLGLMGFQD 633
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGIL---- 585
GL + S A +L + E I Y A +AS++LA + G Y T+ GS +G+L
Sbjct: 634 VLYRRGLSYASEAAVELADEFMEFIAYCAYEASSDLAAERGAYPTFKGSKWDRGLLPLDT 693
Query: 586 ----QVDMWNITP---SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
+ + P + R DW +LRE I + G+RNS ++A PTA+ + I G + EP
Sbjct: 694 LDLLEAERGEPVPVPRTARLDWDALREKIRRQGMRNSNVLAIAPTATIANICGVSPSIEP 753
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N+Y + LSGEF +N +L++DL GLW + + Y +GSV +I IP ELKA
Sbjct: 754 TYKNLYVKSNLSGEFTQLNPYLVRDLKARGLWDKEMLDDLKYYDGSVQEIDRIPPELKAR 813
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y+T +EI+ + L++ AA R +IDQSQSLN+++ +P KL+ ++ AW G+KT YYL
Sbjct: 814 YRTAFEIEPRWLIECAARRQKWIDQSQSLNLYLAEPSGRKLSEMYQLAWQLGLKT-TYYL 872
Query: 759 RTRAAADAIKFTVDTSVLNNE----KANRADNDVEANLAQVVCSLKNQEECMAC 808
R AA K T+D + + K+ +D+ CS + E C AC
Sbjct: 873 RALAATQIEKSTLDINRRGIQPRWMKSRSPSSDIVVRRDGPACS-PDDESCEAC 925
>gi|406942476|gb|EKD74701.1| hypothetical protein ACD_44C00359G0004 [uncultured bacterium]
Length = 939
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 310/806 (38%), Positives = 446/806 (55%), Gaps = 61/806 (7%)
Query: 32 EHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRV--------AV 83
E DP L+ ++ +++G + T L + +A AM P+Y +A R+ A+
Sbjct: 165 ESVDPQLITKEAQRNLFQGASLTDLKKALQLSAKAMIEKEPNYGYVAARLLLAELRSEAL 224
Query: 84 SNLHKITKNSFSETIKDMYNYYNK--RSGKKASLVADDVYEIIMKNAACLDGAIIYDRDF 141
L + NS ++ + Y++ G L+ + +K L A++ DRD
Sbjct: 225 EFLQLPSINSSADMAEAYPRYFDHFIHRGIDVELLDPRLANFNLKK---LGAALLADRDL 281
Query: 142 DFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI---HKDDTDSALKTYHLMSQHWF 198
F+Y G +TL Y L E PQ MRV++G+ +D + A++ Y L+S +
Sbjct: 282 KFNYLGLQTLYDRYFLHHHGTHFELPQAFFMRVAMGLAMNEEDKENRAIEFYLLLSSFDY 341
Query: 199 THATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRAS 258
+TPTLFN+GT +PQLSSCFL + DD ++ IY +K A++SK AGG+G +RA
Sbjct: 342 MSSTPTLFNSGTLRPQLSSCFLSTVPDD-LDSIYGAIKDNALLSKFAGGLGNDWTPVRAM 400
Query: 259 GSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQ 318
GS+I GTNG S G+VP L V N +A V+QGG KR+GA YLE WH DI EFL+LRKN
Sbjct: 401 GSHIKGTNGKSQGVVPFLNVANASAVAVNQGG-KRQGAVCAYLETWHLDIEEFLELRKNT 459
Query: 319 GKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEE-- 376
G + R D+ A W+PDLFM+RV ++G+W+LF PS+ L D +G EFE +Y +YE
Sbjct: 460 GDDRRRTHDMNTANWIPDLFMKRVHENGQWTLFSPSETPELHDLYGAEFEKVYIEYENKA 519
Query: 377 ---EGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIV 433
E R I A LW ++L+ ETG P++ FKD CN +S QQ+ G I SSNLCTEI
Sbjct: 520 ARCELRQYKTIPAISLWRKMLSMLFETGHPWITFKDPCNLRSPQQHTGVIHSSNLCTEIT 579
Query: 434 EFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIIT 493
+S +E AVCNL SI L ++ +KG+ + E+L + +
Sbjct: 580 LNTSQDEIAVCNLGSINLSTHITDKGL--------------------NIEKLEKTVRTAI 619
Query: 494 ENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFET 553
L+ +ID+N+Y + RRSNL+HRPIG+G+ G D+ L +P+ S A + E
Sbjct: 620 RMLDNVIDMNYYAVPQARRSNLKHRPIGLGLMGFQDSLYQLHIPYSSDMAVEFADRSMEY 679
Query: 554 IYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSS 602
I Y A+KAS ELA + G Y ++ GS SKGIL +D + +R DW +
Sbjct: 680 ISYFAIKASNELAKERGSYASFEGSLWSKGILPIDSLELLQKERKQYLQLNKEKNLDWET 739
Query: 603 LREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLK 662
LR I G+RNS +A PTA+ S I G ++ EP N++ + LSGEF V+N +L+
Sbjct: 740 LRIAIRTTGMRNSNTMAIAPTATISNICGVSQSIEPTYQNLFVKSNLSGEFTVINPYLVA 799
Query: 663 DLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYID 722
DL L LW + + Y NGS++K++ +P ELK +Y T +EI L++ AA R +ID
Sbjct: 800 DLKALNLWDDVMINDLKYFNGSLNKLTRVPTELKQLYATAFEIDPLWLIEAAARRQKWID 859
Query: 723 QSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKAN 782
Q QSLN+++ Q KL +L+ +AW +G+KT YYLRT A +A K T+ LN
Sbjct: 860 QGQSLNLYLAQASGKKLDTLYRFAWLRGLKT-TYYLRTLGATNAEKSTIHDHALNAVTTV 918
Query: 783 RADNDVEANLAQVVCSLKNQEECMAC 808
D VCS+ N +C AC
Sbjct: 919 ATDTTAAK-----VCSI-NDPDCEAC 938
>gi|167564162|ref|ZP_02357078.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
oklahomensis EO147]
Length = 953
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 312/799 (39%), Positives = 439/799 (54%), Gaps = 48/799 (6%)
Query: 4 IKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAET 63
+ +G P+ + A + GL + P + + +Y GV TQ+ + A
Sbjct: 157 VTDNGVTRPLDMSALHALIVSACEGLG-DAVSPEPIVSETVKNLYDGVPMTQVYDSAILA 215
Query: 64 AAAMTVNHPDYALLAGRVAVSNLHK------ITKNSFSETIKDMYNYYNKRSGKKASLVA 117
A M P Y+ + R+ + + + +T+ S + + + KR G +A L+
Sbjct: 216 ARTMIEKDPAYSQVTARILLHTIRREILGEEVTQAEMSMRYAEYFPQFLKR-GVEAELLD 274
Query: 118 DDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
D + + +K L A+ RD F Y G +TL Y L +D +E PQ MRV++G
Sbjct: 275 DKLLQFDLKR---LGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMG 331
Query: 178 IHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ ++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+
Sbjct: 332 LALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIYEA 390
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
LK A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 391 LKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 449
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + W+LF PS
Sbjct: 450 GAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPS 509
Query: 355 DASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKD 409
L D +G EFE Y YEE+ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 510 TCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKD 569
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ L
Sbjct: 570 PCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHL 615
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
D L D E+L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 616 AKQADGSYAL-DQEKLKRTVGVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGFQD 674
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 675 CLHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDT 734
Query: 590 WNITPSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
+ R DW LR I G+RNS VA PTA+ S I+G + C EP
Sbjct: 735 LKLLTEARGGYVEVDTSATLDWPVLRARIDSFGMRNSNCVAIAPTATISNIIGVSACIEP 794
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I +P +L+AI
Sbjct: 795 TFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRVPADLRAI 854
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +E+ K LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYL
Sbjct: 855 YATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TYYL 913
Query: 759 RTRAAADAIKFTVDTSVLN 777
RT AA K TV LN
Sbjct: 914 RTMAATHVEKSTVAHGALN 932
>gi|167895963|ref|ZP_02483365.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 7894]
Length = 995
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 307/767 (40%), Positives = 430/767 (56%), Gaps = 47/767 (6%)
Query: 36 PVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------I 89
P + + +Y GV TQ+ + + A M P Y+ + R+ + + + +
Sbjct: 188 PEPIVAETVKNLYDGVPMTQVYDSSILAARTMIEKDPAYSQVTARILLHTIRREILGEEV 247
Query: 90 TKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
T+ + + + + KR G +A L+ D + + +K L A+ RD F Y G +
Sbjct: 248 TQAEMTTRYAEYFPQFLKR-GVEAELLDDKLLQFDLKR---LGDALDASRDLQFGYLGLQ 303
Query: 150 TLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLF 206
TL Y L +D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLF
Sbjct: 304 TLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYNVLSSFDFMSSTPTLF 363
Query: 207 NAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTN 266
N+GT + QLSSC+L + DD ++GIY+ LK A++SK AGG+G +RA GS+I GTN
Sbjct: 364 NSGTRRSQLSSCYLTTVADD-LDGIYEALKDNALLSKFAGGLGNDWTRVRALGSHIKGTN 422
Query: 267 GSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRAR 326
G S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 423 GKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTH 481
Query: 327 DLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV 383
D+ A W+PDLFM+RV + W+LF PS L D +G EFE Y YEE+ G K+
Sbjct: 482 DMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLF 541
Query: 384 --ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEET 441
I A++LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E
Sbjct: 542 KKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEI 601
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L V+ L D L D E+L + L+ +ID
Sbjct: 602 AVCNLGSVNL--------------VAHLAKQADGSYAL-DEEKLKRTVSVAMRMLDNVID 646
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A A
Sbjct: 647 INYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWA 706
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMISKN 610
S ELA + G Y +Y GS +GIL D + R DW +LR I
Sbjct: 707 STELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSATLDWPALRARIDSF 766
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLW 670
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L++DL E GLW
Sbjct: 767 GMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLW 826
Query: 671 SHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIH 730
+ + Y +G +S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLNI+
Sbjct: 827 DEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIY 886
Query: 731 MEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 887 MAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 932
>gi|167721299|ref|ZP_02404535.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei DM98]
Length = 942
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 307/767 (40%), Positives = 430/767 (56%), Gaps = 47/767 (6%)
Query: 36 PVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------I 89
P + + +Y GV TQ+ + + A M P Y+ + R+ + + + +
Sbjct: 188 PEPIVAETVKNLYDGVPMTQVYDSSILAARTMIEKDPAYSQVTARILLHTIRREILGEEV 247
Query: 90 TKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
T+ + + + + KR G +A L+ D + + +K L A+ RD F Y G +
Sbjct: 248 TQAEMTTRYAEYFPQFLKR-GVEAELLDDKLLQFDLKR---LGDALDASRDLQFGYLGLQ 303
Query: 150 TLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLF 206
TL Y L +D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLF
Sbjct: 304 TLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYNVLSSFDFMSSTPTLF 363
Query: 207 NAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTN 266
N+GT + QLSSC+L + DD ++GIY+ LK A++SK AGG+G +RA GS+I GTN
Sbjct: 364 NSGTRRSQLSSCYLTTVADD-LDGIYEALKDNALLSKFAGGLGNDWTRVRALGSHIKGTN 422
Query: 267 GSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRAR 326
G S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 423 GKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTH 481
Query: 327 DLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV 383
D+ A W+PDLFM+RV + W+LF PS L D +G EFE Y YEE+ G K+
Sbjct: 482 DMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLF 541
Query: 384 --ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEET 441
I A++LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E
Sbjct: 542 KKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEI 601
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L V+ L D L D E+L + L+ +ID
Sbjct: 602 AVCNLGSVNL--------------VAHLAKQADGSYAL-DEEKLKRTVSVAMRMLDNVID 646
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A A
Sbjct: 647 INYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWA 706
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMISKN 610
S ELA + G Y +Y GS +GIL D + R DW +LR I
Sbjct: 707 STELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSATLDWPALRARIDSF 766
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLW 670
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L++DL E GLW
Sbjct: 767 GMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLW 826
Query: 671 SHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIH 730
+ + Y +G +S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLNI+
Sbjct: 827 DEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIY 886
Query: 731 MEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 887 MAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 932
>gi|171463020|ref|YP_001797133.1| ribonucleotide-diphosphate reductase subunit alpha
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171192558|gb|ACB43519.1| ribonucleoside-diphosphate reductase, alpha subunit
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 990
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 305/811 (37%), Positives = 455/811 (56%), Gaps = 57/811 (7%)
Query: 33 HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK--IT 90
H D + + +Y GV Q+ + A + + P Y+ + R+ + +HK +
Sbjct: 201 HIDASPIVTETIKNLYDGVPMAQVYDSAILASRTLIEKDPAYSQVTARILMHVIHKEILG 260
Query: 91 KNSFSETIKDMYNYYNKR---SGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFG 147
K ++ Y+ Y + G A L+ + E + A A+ RD F+Y G
Sbjct: 261 KEVLQGDMQAEYSTYFAKYINEGISAELLDPRMREFDLPRLAA---ALNASRDLQFNYLG 317
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPT 204
+TL Y L ++ R +E PQ MRV++G+ ++ D A++ Y ++S F +TPT
Sbjct: 318 LQTLYDRYFLHIEDRRIEMPQAFFMRVAMGLSLNELDRERRAIEFYEILSTFDFMSSTPT 377
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+ T +PQLSSC+L ++DD ++GIY+ LK+ A++SK AGG+G N+RA GS+I G
Sbjct: 378 LFNSATTRPQLSSCYLTTVEDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 436
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 437 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 495
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEG-RAKMV 383
D+ + W+PDLFM+RV ++G+W+LF PS+ L +G FE Y YE++ R ++
Sbjct: 496 THDMSTSNWIPDLFMKRVMENGEWTLFSPSNTPDLHGKFGKAFEEAYVAYEQKADRGELK 555
Query: 384 ----ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPE 439
I A++LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI ++ +
Sbjct: 556 PFRRIPAQQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHIGVVHSSNLCTEITLNTNED 615
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRL-FDFERLAEVTKIITENLNK 498
E AVCNL S+ L ++ + D+ ++ D E+L + L+
Sbjct: 616 EIAVCNLGSVNLTAHM----------------TTDANGKMILDHEKLQRTVRTAMRMLDN 659
Query: 499 IIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHA 558
+ID+N+Y + R SNL+HRP+G+GI G D + +P+ S EA + E + Y+A
Sbjct: 660 VIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHMQRIPYASDEAVKFADSSMEAVCYYA 719
Query: 559 LKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMI 607
+AS ELA + G Y TY GS +GIL D + ++R DW+ LR I
Sbjct: 720 YQASNELAEERGVYSTYKGSLWDRGILPQDSVALLAAERGGYLEVDSSSTMDWNGLRARI 779
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTEL 667
+ G+RNS VA PTA+ S I+G + C EP N++ + LSGEF VVN++L++DL +
Sbjct: 780 KQYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLFVKSNLSGEFTVVNEYLVRDLKDR 839
Query: 668 GLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSL 727
GLW + + Y +G++SKI IP++L+ +Y T +E+ LV+ A+ R +IDQ+QSL
Sbjct: 840 GLWDEVMIADLKYFDGTLSKIDRIPQDLRDLYATAFEVDPTWLVEAASRRQKWIDQAQSL 899
Query: 728 NIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADND 787
NI+M KL + AW +G+KT YYLRT AA K TV + LN + N
Sbjct: 900 NIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTVASGQLNAVSSGGGVNG 958
Query: 788 VEANLA------QVVCSLK----NQEECMAC 808
+A A VC+++ EEC AC
Sbjct: 959 TDAAAAGGVEADGPVCTMRPGDAGFEECEAC 989
>gi|167912608|ref|ZP_02499699.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 112]
Length = 953
Score = 530 bits (1366), Expect = e-147, Method: Compositional matrix adjust.
Identities = 307/767 (40%), Positives = 430/767 (56%), Gaps = 47/767 (6%)
Query: 36 PVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------I 89
P + + +Y GV TQ+ + + A M P Y+ + R+ + + + +
Sbjct: 188 PEPIVAETVKNLYDGVPMTQVYDSSILAARTMIEKDPAYSQVTARILLHTIRREILGEEV 247
Query: 90 TKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
T+ + + + + KR G +A L+ D + + +K L A+ RD F Y G +
Sbjct: 248 TQAEMTTRYAEYFPQFLKR-GVEAELLDDKLLQFDLKR---LGDALDASRDLQFGYLGLQ 303
Query: 150 TLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLF 206
TL Y L +D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLF
Sbjct: 304 TLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYNVLSSFDFMSSTPTLF 363
Query: 207 NAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTN 266
N+GT + QLSSC+L + DD ++GIY+ LK A++SK AGG+G +RA GS+I GTN
Sbjct: 364 NSGTRRSQLSSCYLTTVADD-LDGIYEALKDNALLSKFAGGLGNDWTRVRALGSHIKGTN 422
Query: 267 GSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRAR 326
G S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 423 GKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTH 481
Query: 327 DLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV 383
D+ A W+PDLFM+RV + W+LF PS L D +G EFE Y YEE+ G K+
Sbjct: 482 DMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLF 541
Query: 384 --ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEET 441
I A++LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E
Sbjct: 542 KKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEI 601
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L V+ L D L D E+L + L+ +ID
Sbjct: 602 AVCNLGSVNL--------------VAHLAKQADGSYAL-DEEKLKRTVSVAMRMLDNVID 646
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A A
Sbjct: 647 INYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWA 706
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMISKN 610
S ELA + G Y +Y GS +GIL D + R DW +LR I
Sbjct: 707 STELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSATLDWPALRARIDSF 766
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLW 670
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L++DL E GLW
Sbjct: 767 GMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLW 826
Query: 671 SHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIH 730
+ + Y +G +S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLNI+
Sbjct: 827 DEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIY 886
Query: 731 MEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 887 MAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 932
>gi|167740268|ref|ZP_02413042.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 14]
gi|167817488|ref|ZP_02449168.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 91]
gi|167847375|ref|ZP_02472883.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei B7210]
Length = 954
Score = 530 bits (1366), Expect = e-147, Method: Compositional matrix adjust.
Identities = 307/767 (40%), Positives = 430/767 (56%), Gaps = 47/767 (6%)
Query: 36 PVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------I 89
P + + +Y GV TQ+ + + A M P Y+ + R+ + + + +
Sbjct: 188 PEPIVAETVKNLYDGVPMTQVYDSSILAARTMIEKDPAYSQVTARILLHTIRREILGEEV 247
Query: 90 TKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
T+ + + + + KR G +A L+ D + + +K L A+ RD F Y G +
Sbjct: 248 TQAEMTTRYAEYFPQFLKR-GVEAELLDDKLLQFDLKR---LGDALDASRDLQFGYLGLQ 303
Query: 150 TLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLF 206
TL Y L +D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLF
Sbjct: 304 TLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYNVLSSFDFMSSTPTLF 363
Query: 207 NAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTN 266
N+GT + QLSSC+L + DD ++GIY+ LK A++SK AGG+G +RA GS+I GTN
Sbjct: 364 NSGTRRSQLSSCYLTTVADD-LDGIYEALKDNALLSKFAGGLGNDWTRVRALGSHIKGTN 422
Query: 267 GSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRAR 326
G S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 423 GKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTH 481
Query: 327 DLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV 383
D+ A W+PDLFM+RV + W+LF PS L D +G EFE Y YEE+ G K+
Sbjct: 482 DMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLF 541
Query: 384 --ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEET 441
I A++LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E
Sbjct: 542 KKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEI 601
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L V+ L D L D E+L + L+ +ID
Sbjct: 602 AVCNLGSVNL--------------VAHLAKQADGSYAL-DEEKLKRTVSVAMRMLDNVID 646
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A A
Sbjct: 647 INYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWA 706
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMISKN 610
S ELA + G Y +Y GS +GIL D + R DW +LR I
Sbjct: 707 STELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSATLDWPALRARIDSF 766
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLW 670
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L++DL E GLW
Sbjct: 767 GMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLW 826
Query: 671 SHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIH 730
+ + Y +G +S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLNI+
Sbjct: 827 DEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIY 886
Query: 731 MEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 887 MAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 932
>gi|302877616|ref|YP_003846180.1| ribonucleoside-diphosphate reductase subunit alpha [Gallionella
capsiferriformans ES-2]
gi|302580405|gb|ADL54416.1| ribonucleoside-diphosphate reductase, alpha subunit [Gallionella
capsiferriformans ES-2]
Length = 944
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 314/832 (37%), Positives = 456/832 (54%), Gaps = 55/832 (6%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V +DG +P+ +++ ++ GL E D LV Q +Y GV ++ +
Sbjct: 141 VTGKDGVVQPLDLARLSVLVQSACEGLG-EVVDAELVLQVALKDMYDGVPLHEVHKCLIL 199
Query: 63 TAAAMTVNHPDYALLAGRVAVSNL------HKITKNSFSETIKDMYNYYNKRSGKKASLV 116
+A +M P Y + R+ ++N+ + + D + + KR G A L+
Sbjct: 200 SARSMIEKEPAYNFVTARLLLNNICSEVLGEDVAPADMATRYADYFPKFIKR-GIAAELL 258
Query: 117 ADDVYEI-IMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVS 175
+ + + + AA LD + RD F Y G +TL Y L + +E PQ MRV+
Sbjct: 259 DEKLAGFDLPRLAAELDAS----RDLQFGYLGLQTLYDRYFLHIGGTRIEAPQVFFMRVA 314
Query: 176 VGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIY 232
+G+ ++ D A++ Y L+S F +TPTLFN+G+ + QLSSC+L ++D+ +EGIY
Sbjct: 315 MGLALNEIDREARAIEFYRLLSGFDFMCSTPTLFNSGSRRSQLSSCYLSTVEDN-LEGIY 373
Query: 233 DTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGK 292
D +K A+++K AGG+G +RA G++I GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 374 DAIKDNALLAKFAGGLGNDWTPVRALGAHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-K 432
Query: 293 RKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFC 352
RKGA YLE WH DI EFLDLRKN G + R D+ + W+PDLFM+RV + G W+LF
Sbjct: 433 RKGAVCAYLETWHLDIEEFLDLRKNTGDDRRRTHDMNTSNWIPDLFMKRVMEGGNWTLFS 492
Query: 353 PSDASGLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETGTPYMLF 407
PSD L D +GI+FE Y+ YEE+ A + + A LW ++L ETG P++ F
Sbjct: 493 PSDVKDLHDLFGIDFEIAYTAYEEKAAAGQIKLYKTVQAASLWRKMLTMLFETGHPWITF 552
Query: 408 KDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVS 467
KD CN +S QQ++G + SSNLCTEI ++ +E AVCNL S+ LP ++ +G + +
Sbjct: 553 KDPCNIRSPQQHVGVVHSSNLCTEITLNTNADEIAVCNLGSVNLPAHLYPEGHDLAGQI- 611
Query: 468 KLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGL 527
D +L L+ +ID+N+Y + R SNL+HRP+G+GI G
Sbjct: 612 -------------DHAKLRRTINTAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGF 658
Query: 528 ADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQV 587
D L LP+ S EA + E + Y+A AS ELA + G Y +Y GS GIL
Sbjct: 659 QDCLHQLRLPYSSMEAVEFADRSMEAVCYYAYWASTELAEERGRYASYKGSLWDCGILPQ 718
Query: 588 DMWNITPSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D ++ +R DW +LR I + G+RNS VA PTA+ S I+G + C
Sbjct: 719 DTLDLLREERGGYVEVDTSVSMDWDALRARIGQYGMRNSNCVAIAPTATISNIIGVSACI 778
Query: 637 EPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELK 696
EP N++ + LSGEF V+N HL+ +L LGLW + + + Y +GS++KI IP EL+
Sbjct: 779 EPTYQNLFVKSNLSGEFTVINDHLVAELKRLGLWDEVMISDLKYFDGSLAKIDRIPAELR 838
Query: 697 AIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMY 756
++Y T +E++ L++ A+ R +IDQ+QSLNI+M KL + AW +G+KT Y
Sbjct: 839 SLYATAFEVEPSWLIEAASRRQKWIDQAQSLNIYMAGVSGRKLDDTYKLAWVRGLKT-TY 897
Query: 757 YLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
YLRT A A K T LN D A Q CS+ N EC AC
Sbjct: 898 YLRTLGATSAEKSTGRAGALNAVSV----GDAPAETTQ-FCSIDN-PECEAC 943
>gi|53720600|ref|YP_109586.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei K96243]
gi|53726101|ref|YP_104056.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
mallei ATCC 23344]
gi|67643594|ref|ZP_00442339.1| ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Burkholderia mallei GB8 horse 4]
gi|76810342|ref|YP_334882.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1710b]
gi|121601276|ref|YP_991781.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
mallei SAVP1]
gi|124384186|ref|YP_001027274.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
mallei NCTC 10229]
gi|126439753|ref|YP_001060485.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 668]
gi|126448585|ref|YP_001082789.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
mallei NCTC 10247]
gi|126454560|ref|YP_001067749.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1106a]
gi|134280283|ref|ZP_01766994.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 305]
gi|166998594|ref|ZP_02264452.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei PRL-20]
gi|167825889|ref|ZP_02457360.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 9]
gi|217420768|ref|ZP_03452273.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 576]
gi|226196789|ref|ZP_03792368.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei Pakistan 9]
gi|237813880|ref|YP_002898331.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei MSHR346]
gi|242315545|ref|ZP_04814561.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1106b]
gi|254178878|ref|ZP_04885532.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei ATCC 10399]
gi|254180585|ref|ZP_04887183.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1655]
gi|254190978|ref|ZP_04897484.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei Pasteur 52237]
gi|254199123|ref|ZP_04905538.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei S13]
gi|254202775|ref|ZP_04909138.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei FMH]
gi|254208117|ref|ZP_04914467.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei JHU]
gi|254257988|ref|ZP_04949042.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1710a]
gi|254299328|ref|ZP_04966778.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 406e]
gi|386860430|ref|YP_006273379.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1026b]
gi|403520184|ref|YP_006654318.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei BPC006]
gi|418538893|ref|ZP_13104494.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1026a]
gi|418539663|ref|ZP_13105246.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1258a]
gi|418545913|ref|ZP_13111151.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1258b]
gi|418552364|ref|ZP_13117229.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 354e]
gi|52211014|emb|CAH37002.1| putative ribonucleoside reductase [Burkholderia pseudomallei
K96243]
gi|52429524|gb|AAU50117.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei ATCC 23344]
gi|76579795|gb|ABA49270.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1710b]
gi|121230086|gb|ABM52604.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei SAVP1]
gi|124292206|gb|ABN01475.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei NCTC 10229]
gi|126219246|gb|ABN82752.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 668]
gi|126228202|gb|ABN91742.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1106a]
gi|126241455|gb|ABO04548.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei NCTC 10247]
gi|134248290|gb|EBA48373.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 305]
gi|147747022|gb|EDK54099.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei FMH]
gi|147752011|gb|EDK59078.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei JHU]
gi|157809187|gb|EDO86357.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 406e]
gi|157938652|gb|EDO94322.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei Pasteur 52237]
gi|160694792|gb|EDP84800.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei ATCC 10399]
gi|169656953|gb|EDS88350.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei S13]
gi|184211124|gb|EDU08167.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1655]
gi|217396180|gb|EEC36197.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 576]
gi|225931049|gb|EEH27057.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei Pakistan 9]
gi|237505593|gb|ACQ97911.1| ribonucleoside-diphosphate reductase subunit alpha (Ribonucleotide
reductase) [Burkholderia pseudomallei MSHR346]
gi|238524966|gb|EEP88396.1| ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Burkholderia mallei GB8 horse 4]
gi|242138784|gb|EES25186.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1106b]
gi|243065277|gb|EES47463.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei PRL-20]
gi|254216677|gb|EET06061.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1710a]
gi|385346574|gb|EIF53249.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1026a]
gi|385364108|gb|EIF69851.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1258a]
gi|385365931|gb|EIF71584.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1258b]
gi|385373198|gb|EIF78264.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 354e]
gi|385657558|gb|AFI64981.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1026b]
gi|403075827|gb|AFR17407.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei BPC006]
Length = 995
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 307/767 (40%), Positives = 430/767 (56%), Gaps = 47/767 (6%)
Query: 36 PVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------I 89
P + + +Y GV TQ+ + + A M P Y+ + R+ + + + +
Sbjct: 188 PEPIVAETVKNLYDGVPMTQVYDSSILAARTMIEKDPAYSQVTARILLHTIRREILGEEV 247
Query: 90 TKNSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFK 149
T+ + + + + KR G +A L+ D + + +K L A+ RD F Y G +
Sbjct: 248 TQAEMTTRYAEYFPQFLKR-GVEAELLDDKLLQFDLKR---LGDALDASRDLQFGYLGLQ 303
Query: 150 TLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLF 206
TL Y L +D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLF
Sbjct: 304 TLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYNVLSSFDFMSSTPTLF 363
Query: 207 NAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTN 266
N+GT + QLSSC+L + DD ++GIY+ LK A++SK AGG+G +RA GS+I GTN
Sbjct: 364 NSGTRRSQLSSCYLTTVADD-LDGIYEALKDNALLSKFAGGLGNDWTRVRALGSHIKGTN 422
Query: 267 GSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRAR 326
G S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 423 GKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTH 481
Query: 327 DLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV 383
D+ A W+PDLFM+RV + W+LF PS L D +G EFE Y YEE+ G K+
Sbjct: 482 DMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLF 541
Query: 384 --ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEET 441
I A++LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E
Sbjct: 542 KKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEI 601
Query: 442 AVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIID 501
AVCNL S+ L V+ L D L D E+L + L+ +ID
Sbjct: 602 AVCNLGSVNL--------------VAHLAKQADGSYAL-DEEKLKRTVSVAMRMLDNVID 646
Query: 502 VNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKA 561
+N+Y + R SNL+HRP+G+GI G D LL P+ S EA + E + Y+A A
Sbjct: 647 INYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWA 706
Query: 562 SAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMISKN 610
S ELA + G Y +Y GS +GIL D + R DW +LR I
Sbjct: 707 STELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSATLDWPALRARIDSF 766
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLW 670
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L++DL E GLW
Sbjct: 767 GMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLW 826
Query: 671 SHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIH 730
+ + Y +G +S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QSLNI+
Sbjct: 827 DEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIY 886
Query: 731 MEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 887 MAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 932
>gi|167574514|ref|ZP_02367388.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
oklahomensis C6786]
Length = 944
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 312/799 (39%), Positives = 439/799 (54%), Gaps = 48/799 (6%)
Query: 4 IKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAET 63
+ +G P+ + A + GL + P + + +Y GV TQ+ + A
Sbjct: 157 VTDNGVTRPLDMSALHALIVSACEGLG-DAVSPEPIVSETVKNLYDGVPMTQVYDSAILA 215
Query: 64 AAAMTVNHPDYALLAGRVAVSNLHK------ITKNSFSETIKDMYNYYNKRSGKKASLVA 117
A M P Y+ + R+ + + + +T+ S + + + KR G +A L+
Sbjct: 216 ARTMIEKDPAYSQVTARILLHTIRREILGEEVTQAEMSMRYAEYFPQFLKR-GVEAELLD 274
Query: 118 DDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
D + + +K L A+ RD F Y G +TL Y L +D +E PQ MRV++G
Sbjct: 275 DKLLQFDLKR---LGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMG 331
Query: 178 IHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ ++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+
Sbjct: 332 LALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIYEA 390
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
LK A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 391 LKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 449
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + W+LF PS
Sbjct: 450 GAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPS 509
Query: 355 DASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKD 409
L D +G EFE Y YEE+ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 510 TCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKD 569
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ L
Sbjct: 570 PCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHL 615
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
D L D E+L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 616 AKQADGSYAL-DQEKLKRTVGVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGFQD 674
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 675 CLHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDT 734
Query: 590 WNITPSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
+ R DW LR I G+RNS VA PTA+ S I+G + C EP
Sbjct: 735 LKLLTEARGGYVEVDTSATLDWPVLRARIDSFGMRNSNCVAIAPTATISNIIGVSACIEP 794
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I +P +L+AI
Sbjct: 795 TFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRVPADLRAI 854
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +E+ K LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYL
Sbjct: 855 YATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TYYL 913
Query: 759 RTRAAADAIKFTVDTSVLN 777
RT AA K TV LN
Sbjct: 914 RTMAATHVEKSTVAHGALN 932
>gi|312795098|ref|YP_004028020.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
rhizoxinica HKI 454]
gi|312166873|emb|CBW73876.1| Ribonucleoside-diphosphate reductase alpha chain (EC 1.17.4.1)
[Burkholderia rhizoxinica HKI 454]
Length = 1046
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 313/787 (39%), Positives = 442/787 (56%), Gaps = 56/787 (7%)
Query: 18 ITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALL 77
ITA L +S E P+ VA+ V +Y GV +Q+ + A A M P Y+ +
Sbjct: 227 ITAACDGLGEAVSAE---PI-VAETV-KNLYDGVPLSQVYDSAILAARTMIEKEPAYSQV 281
Query: 78 AGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVADDVYEIIMKNAA 129
R+ LH I + E + +M Y + + G +A L+ + + + +K
Sbjct: 282 TARLL---LHTIRREILGEEVLQSEMGARYAEYFPQFLKRGVEAELLDEKLLQFDLKK-- 336
Query: 130 CLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---A 186
L A+ RD F Y G +TL Y L +D + +E PQ MRV++G+ ++ D A
Sbjct: 337 -LGDALDASRDLKFGYLGLQTLYDRYFLHVDGQRIEMPQAFFMRVAMGLALNEIDREARA 395
Query: 187 LKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAG 246
++ Y+++S F +TPTLFN+GT + QLSSC+L + DD +EGIY+ LK+ A++SK AG
Sbjct: 396 IEFYNVLSTFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LEGIYEALKENALLSKFAG 454
Query: 247 GIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHA 306
G+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH
Sbjct: 455 GLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHL 513
Query: 307 DIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIE 366
DI EFL+LRKN G + R D+ A W+PDLFM+RV + G W+LF PS L D +G E
Sbjct: 514 DIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVIEGGDWTLFSPSSCPDLHDKFGAE 573
Query: 367 FEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLG 421
FE Y YEE+ G K+ I A +LW ++L ETG P++ FKD C +S QQ++G
Sbjct: 574 FEQAYVAYEEKAARGELKLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCXVRSPQQHVG 633
Query: 422 TIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFD 481
+ SSNLCTEI +S E AVCNL S+ L ++++ + D
Sbjct: 634 VVHSSNLCTEITLNTSDNEIAVCNLGSVNLVAHMKQGA---------------DXGYVLD 678
Query: 482 FERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESP 541
++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D LL P+ S
Sbjct: 679 HDKLKRTISVAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASQ 738
Query: 542 EAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR---- 597
+A + E I Y+A AS ELA + G Y +Y GS +GIL D + R
Sbjct: 739 QAVEFADRSMEAICYYAYWASTELASERGRYSSYRGSLWDRGILPQDTLKLLADSRGGYV 798
Query: 598 -------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLS 650
DW++LRE I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LS
Sbjct: 799 EVDSSETMDWAALRERIATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLS 858
Query: 651 GEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTL 710
GEF VVN++L++DL GLW + + Y +GS+++I IP +L+ Y T +E+ K L
Sbjct: 859 GEFTVVNEYLVRDLKARGLWDEVMVADLKYFDGSLARIDRIPADLRETYATAFEVDPKWL 918
Query: 711 VDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFT 770
V+ AA R +IDQ+QSLNI+M KL ++ AW +G+KT YYLRT AA K T
Sbjct: 919 VEAAARRQKWIDQAQSLNIYMAGASGKKLDEIYKLAWLRGLKT-TYYLRTIAATHVEKST 977
Query: 771 VDTSVLN 777
V LN
Sbjct: 978 VAHGALN 984
>gi|402567672|ref|YP_006617017.1| ribonucleotide reductase subunit alpha [Burkholderia cepacia GG4]
gi|402248869|gb|AFQ49323.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Burkholderia cepacia GG4]
Length = 997
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 308/796 (38%), Positives = 446/796 (56%), Gaps = 48/796 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G P+ + + A + GL +P + + +Y GV +Q+ + A A
Sbjct: 161 NGITRPLDLNALRALIVSACDGLGAA-VNPDPIVAETVKNLYDGVPMSQVYDSAILAART 219
Query: 67 MTVNHPDYALLAGRVAVSNLHK------ITKNSFSETIKDMYNYYNKRSGKKASLVADDV 120
M P Y+ + R+ + + + + ++ S + + + KR G A L+ D +
Sbjct: 220 MIEKDPAYSQVTSRILLHTIRREILGEEVVQSEMSARYAEYFPQFLKR-GVDAGLLDDKL 278
Query: 121 YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
+ + L A+ +RD F Y G +TL Y L ++ +E PQ MRV++G+
Sbjct: 279 LQFDLTR---LGEALDANRDLQFGYLGLQTLYDRYFLHVEGSRIEMPQAFFMRVAMGLSL 335
Query: 181 DDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+ LK+
Sbjct: 336 NEIDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKE 394
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 395 NALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAV 453
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + W+LF PS
Sbjct: 454 CAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCP 513
Query: 358 GLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDSCN 412
L D +G EFE Y+ YE++ G K+ I A++LW ++L ETG P++ FKD CN
Sbjct: 514 DLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCN 573
Query: 413 RKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
+S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ LV
Sbjct: 574 VRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHLVKQ 619
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D L D ++L ++ L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 620 ADGSYAL-DHDKLQRTIRVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLH 678
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN- 591
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 679 LLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTLKL 738
Query: 592 ----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTS 641
+ S+ DW+SLR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 739 LTEARGGYVEVDTSEALDWTSLRSRIAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQ 798
Query: 642 NIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKT 701
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AIY T
Sbjct: 799 NLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYAT 858
Query: 702 VWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTR 761
+E+ LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYLRT
Sbjct: 859 AFEVDPTWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTM 917
Query: 762 AAADAIKFTVDTSVLN 777
AA K TV LN
Sbjct: 918 AATHVEKSTVAHGALN 933
>gi|78065155|ref|YP_367924.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
sp. 383]
gi|77965900|gb|ABB07280.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. 383]
Length = 998
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 312/798 (39%), Positives = 443/798 (55%), Gaps = 52/798 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G P+ + + A + GL +P + + +Y GV +Q+ + A A
Sbjct: 161 NGVTRPLDLNALRALVVSACDGLGAA-VNPDPIVAETVKNLYDGVPMSQVYDSAILAART 219
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVAD 118
M P Y+ + R+ LH I + E + +M Y + + G A L+ D
Sbjct: 220 MIEKDPAYSQVTSRIL---LHTIRREILGEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDD 276
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + +K L A+ +RD F Y G +TL Y L ++ +E PQ MRV++G+
Sbjct: 277 KLLQFDLKR---LGEALDANRDLQFGYLGLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGL 333
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+ L
Sbjct: 334 SLNEIDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEAL 392
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 393 KENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 451
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + W+LF PS
Sbjct: 452 AVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPST 511
Query: 356 ASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G EFE Y+ YE++ G K+ I A +LW ++L ETG P++ FKD
Sbjct: 512 CPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAAQLWRKMLGMLFETGHPWITFKDP 571
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ LV
Sbjct: 572 CNVRSPQQHVGVVHSSNLCTEITLNTSDSEIAVCNLGSVNL--------------VAHLV 617
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 618 KQADGSFAL-DHDKLKRTISVAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDC 676
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
LL P+ S A E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 677 LHLLRTPYASEAAVAFADRSMEAVCYYAYHASTELAEERGRYSSYRGSLWDRGILPQDTL 736
Query: 591 N-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ S+ DW+SLR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 737 KLLAEARGGYVEVDTSESLDWTSLRSRIATHGMRNSNCVAIAPTATISNIIGVSACIEPT 796
Query: 640 TSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AIY
Sbjct: 797 FQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIY 856
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
T +E+ LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYLR
Sbjct: 857 ATAFEVDPTWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLR 915
Query: 760 TRAAADAIKFTVDTSVLN 777
T AA K TV LN
Sbjct: 916 TMAATHVEKSTVAHGALN 933
>gi|110635037|ref|YP_675245.1| ribonucleotide-diphosphate reductase subunit alpha [Chelativorans
sp. BNC1]
gi|110286021|gb|ABG64080.1| ribonucleoside-diphosphate reductase, alpha subunit [Chelativorans
sp. BNC1]
Length = 954
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 307/801 (38%), Positives = 442/801 (55%), Gaps = 59/801 (7%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLV-AQKVCAGVYKGVTTTQLDEL 59
+ V+ DG K P+ ++TA +++ GL + +L AQ+ +Y G+T +L
Sbjct: 145 LQVMLEDGSKTPLDIARLTAVVEEACQGLEAVSAEAILSEAQR---NLYDGITLDELSLA 201
Query: 60 AAETAAAMTVNHPDYALLAGRVAVSNLHK---------ITKNSFSETIKDMYNYYNK--R 108
A + P+Y+ ++ R+ + L + T+ + +E ++ Y+
Sbjct: 202 PILAARTLVETEPNYSQVSARLLLDKLRREALTFVEGRPTQATQAEMVERYPAYFEGFIA 261
Query: 109 SGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQ 168
+G +A ++ ++ +K L A+ +RD F Y GF+TL Y L D E PQ
Sbjct: 262 AGIQAEMIDPELGRFDLKR---LGAALKPERDLRFQYLGFQTLYDRYFLHEDGVRYELPQ 318
Query: 169 HMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKD 225
MRV++G+ + D A++ Y L+S F +TPTLFNAGT +PQLSSCFL + D
Sbjct: 319 AFFMRVAMGLALREIDREARAIEFYDLISTFDFMCSTPTLFNAGTLRPQLSSCFLTTVSD 378
Query: 226 DSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARY 285
D ++GI+ +K A+++K +GG+G +R G+ I GTNG S GIVP L+V NDTA
Sbjct: 379 D-LDGIFKAVKDNALLAKYSGGLGNDWTPVRGLGARIKGTNGKSQGIVPFLKVANDTAIA 437
Query: 286 VDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDD 345
V+QGG KRKGA YLE WH DI EFLDLRKN G + R D+ A WVPDLFMERV D
Sbjct: 438 VNQGG-KRKGAVCAYLETWHVDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMERVEAD 496
Query: 346 GKWSLFCPSDASGLADSWGIEFEHLYSQYEE-----EGRAKMVISARKLWFEILNSQIET 400
G+W+LF P + L D +G F+ Y +YE E R + A LW +L ET
Sbjct: 497 GEWTLFSPDETPDLHDLYGPAFKAAYEEYEARAARGEIRVFRQVRAVDLWRRMLTMLFET 556
Query: 401 GTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGV 460
G P++ FKD CN +S Q++ G + SSNLCTEI +S +E AVCNL SI L +V EKG+
Sbjct: 557 GHPWITFKDPCNLRSPQRHAGVVHSSNLCTEITLNTSKDEVAVCNLGSINLAAHVSEKGL 616
Query: 461 PVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPI 520
D E+LA L+ +ID+N Y I RRSNLRHRP+
Sbjct: 617 --------------------DMEKLARTVATAMRMLDNVIDINFYTIPEARRSNLRHRPV 656
Query: 521 GIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPM 580
G+G+ G D L LP+ S A + E I YHA+ AS ELA + G Y ++ GS
Sbjct: 657 GLGLMGFQDALQTLRLPYASEGAVEFADRSMEAIAYHAISASVELAKERGAYASFEGSLW 716
Query: 581 SKGILQVDMWNITPSDR----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQIL 630
SKG+L +D + R DW SLR + ++G+RNS +A PTA+ S I
Sbjct: 717 SKGVLPIDSLSFVAESRGVDGMDRGTTLDWESLRARVVEHGMRNSNTMAIAPTATISNIC 776
Query: 631 GNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISE 690
G ++ EP N++ + +SG+F VVN L+ DL GLW + + + Y +G + +I
Sbjct: 777 GVSQSIEPAYQNLFVKSNMSGDFTVVNAALVHDLKARGLWDEVMVSDLKYYDGLLGQIDR 836
Query: 691 IPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKG 750
+P++LKA+Y T +EI L++ A+ R +IDQ+QSLN+++ P KL L+ AW KG
Sbjct: 837 VPDDLKALYATAFEIDPAWLIEAASRRQKWIDQAQSLNLYIANPSGKKLDELYRLAWRKG 896
Query: 751 MKTGMYYLRTRAAADAIKFTV 771
+KT YYLR+R+A K T+
Sbjct: 897 LKT-TYYLRSRSATHVEKSTL 916
>gi|300690380|ref|YP_003751375.1| ribonucleoside-diphosphate reductase subunit alpha [Ralstonia
solanacearum PSI07]
gi|299077440|emb|CBJ50066.1| Ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
solanacearum PSI07]
gi|344169190|emb|CCA81513.1| ribonucleoside-diphosphate reductase, alpha subunit [blood disease
bacterium R229]
Length = 987
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 304/772 (39%), Positives = 439/772 (56%), Gaps = 49/772 (6%)
Query: 32 EHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK--- 88
E DP + ++ +Y+GV +Q+ + A A + P Y+ + R+ + + +
Sbjct: 180 EAVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQVTARILLHTIRREIL 239
Query: 89 ---ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEI-IMKNAACLDGAIIYDRDFDFD 144
+T+ + D + + KR G A L+ + + + + K A LD + RD F+
Sbjct: 240 GEEVTQAEMAARYADYFPQFIKR-GINAGLLDEKLAQFDLAKLGAALDAS----RDLQFN 294
Query: 145 YFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHA 201
Y G +TL Y L + + +E PQ MRV++G+ ++ D A++ Y L+S F +
Sbjct: 295 YLGLQTLFDRYFLHISEKRIEMPQAFFMRVAMGLSLNEIDRESRAIEFYQLLSSFDFMSS 354
Query: 202 TPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSY 261
TPTLFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G N+RA GS+
Sbjct: 355 TPTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSH 413
Query: 262 IHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKE 321
I GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 414 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDD 472
Query: 322 ECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---G 378
R D+ A W+PDLFM+RV ++G+W+LF PS L D G FE Y YEE+ G
Sbjct: 473 RRRTHDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGKAFETAYLGYEEKVARG 532
Query: 379 RAKMV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFS 436
K+ + A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +
Sbjct: 533 EIKLFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNT 592
Query: 437 SPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENL 496
+ E AVCNL S+ L V+ LV D L D ++L + + L
Sbjct: 593 NDSEIAVCNLGSVNL--------------VAHLVTQADGSVAL-DHDKLKKTVRTAMRML 637
Query: 497 NKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYY 556
+ +ID+N+Y ++ R SNLRHRP+G+GI G D +L +P+ S A Q + E + Y
Sbjct: 638 DNVIDINYYAVKKARDSNLRHRPVGLGIMGFQDALHVLRIPYASDAAVQFADNSMEAVCY 697
Query: 557 HALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLRE 605
+A AS ELA + G Y TY GS +GIL D + +R DW SLR
Sbjct: 698 YAYWASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLEADLSSSMDWDSLRA 757
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLT 665
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL
Sbjct: 758 RIQQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLK 817
Query: 666 ELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQ 725
GLW + + Y +GS+++I IP++L+ +Y T +E++ + LV+ A+ R +IDQ+Q
Sbjct: 818 ARGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQ 877
Query: 726 SLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
SLNI+M L + AW +G+KT YYLRT A K TV LN
Sbjct: 878 SLNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTLN 928
>gi|271967541|ref|YP_003341737.1| ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
43021]
gi|270510716|gb|ACZ88994.1| Ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
43021]
Length = 731
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 308/762 (40%), Positives = 438/762 (57%), Gaps = 64/762 (8%)
Query: 59 LAAETAAAMTVNHPDYALLAGRVAVSNLHKITKN--------SFSETIKDMYNYYNKRSG 110
LA E AAA + P+ + R+A L ++ + +FSE++ +
Sbjct: 21 LAIEEAAARVITDPENS----RIAAGLLAELIADEAAGHGVRAFSESVAATH-------- 68
Query: 111 KKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK--MDSRVVERPQ 168
A LV D + + +AA LD + D D F+YFG +T+ YLL+ +V+ERPQ
Sbjct: 69 -AAGLVQDGLAAFVAAHAAELDALVAQDADDRFEYFGLRTVYDRYLLRHPRTRQVLERPQ 127
Query: 169 HMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSI 228
H +RV+ G+ + + A + Y LMS + ++PTLFN+G+ +PQLSSCFLL D +
Sbjct: 128 HFFLRVACGL-SETVEEAAELYALMSTLSYLPSSPTLFNSGSRRPQLSSCFLLDSPRDEL 186
Query: 229 EGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQ 288
E IY+ + A +SK AGGIG++ +R+ GS I GTNG SNGIVP L+ + + V+Q
Sbjct: 187 EAIYERYGQVARLSKYAGGIGIAWTRVRSRGSLIRGTNGHSNGIVPWLRTLDSSVAAVNQ 246
Query: 289 GGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKW 348
GG +RKGA +YLE WHAD+ EFL+LR N G+E R +L A W+PD FM RV DG W
Sbjct: 247 GG-RRKGAACVYLESWHADVEEFLELRDNTGEEARRTHNLNLANWIPDEFMRRVEADGVW 305
Query: 349 SLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEILNSQIETGTPYMLFK 408
SLF P + L D +G FE Y E EGR I AR L+ ++ + +TG +M FK
Sbjct: 306 SLFDPKEVPHLTDLYGAAFEEAYRAAEAEGRYVKQIPARSLYGRMMRTLAQTGNGWMTFK 365
Query: 409 DSCNRKSNQ--QNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNV 466
D+ NR SNQ + I SNLCTEI+E ++ ETAVCNL SI N+
Sbjct: 366 DAANRTSNQTARPENVIHLSNLCTEILEVTNDAETAVCNLGSI---------------NL 410
Query: 467 SKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQG 526
+ + RD D+ RL + L++ ID+ YP +N + RPIG+G+ G
Sbjct: 411 AAHLDGRD-----VDWTRLRRTVRTAVRFLDRTIDLGFYPTPEAGTANRKWRPIGLGVMG 465
Query: 527 LADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQ 586
LAD L LPF+SP+A +L+ I E I A S++LAV+ G + +Y + + G+L
Sbjct: 466 LADVLFALRLPFDSPQALELSTRISEEIALAAYATSSDLAVERGRHPSYDDTRAAAGVLH 525
Query: 587 VDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTR 646
D + S +W++LR+ I++ G+RNSL++A PTA+ + I G EC EP SNI+ R
Sbjct: 526 PDHYGAARSP--EWAALRDRIAETGLRNSLMIAIAPTATIASIAGCYECIEPQVSNIFKR 583
Query: 647 RVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIK 706
LSGEF+ VN++L++DL GLW+ ++ I +GSV + +PE+LK++Y+T WE+
Sbjct: 584 ETLSGEFLQVNRYLVRDLQARGLWTPQIRDAIKRADGSVQDVPGMPEDLKSLYRTAWELP 643
Query: 707 QKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADA 766
QK L+D+AA R YIDQSQSLN+ M P GKL+S++ YAW G+KT YYLR+R A
Sbjct: 644 QKALIDLAAARTPYIDQSQSLNLFMATPTIGKLSSMYAYAWKSGLKT-TYYLRSRPATRI 702
Query: 767 IKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
+ TV +V + E V CSL+N E C AC
Sbjct: 703 AQTTVAQAVPDPEA--------------VACSLENPEYCDAC 730
>gi|393778161|ref|ZP_10366443.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia sp.
PBA]
gi|392714896|gb|EIZ02488.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia sp.
PBA]
Length = 975
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 313/813 (38%), Positives = 448/813 (55%), Gaps = 62/813 (7%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------ 88
DP + + +Y GV +Q+ + A A + P Y+ + R+ + + K
Sbjct: 185 DPEPILAETIKNLYDGVPMSQVYDSAILAARTLIEQDPAYSQVTARILLHTIRKEILGEE 244
Query: 89 ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEI-IMKNAACLDGAIIYDRDFDFDYFG 147
+T+ + + Y KR G A L+ + + + + K A LD + RDF F+Y G
Sbjct: 245 VTQGEMVTRYAEYFPKYIKR-GIDAELLDEKLAQFDLQKLGAALDAS----RDFQFNYLG 299
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPT 204
+TL Y L + +E PQ MRV++G+ ++ D A++ Y L+S F +TPT
Sbjct: 300 LQTLYDRYFLHHNDVRIEMPQAFFMRVAMGLALNEIDREARAIEFYQLLSSFDFMSSTPT 359
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G N+RA GS+I G
Sbjct: 360 LFNSGTRRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 418
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 419 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 477
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAK 381
D+ A W+PDLFM+RV + G W+LF PS L D +G FE Y YE++ G K
Sbjct: 478 THDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGKAFEEAYVAYEDKVARGELK 537
Query: 382 MV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPE 439
+ I A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI ++
Sbjct: 538 LFKKIPAVQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDS 597
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
E AVCNL S+ L +++ S + D ++L + + L+ +
Sbjct: 598 EIAVCNLGSVNLLAHMKADA---------------SGAMVLDHDKLKKTIRTAMRMLDNV 642
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
ID+N+Y ++ R SNLRHRP+G+GI G D + +P+ S A Q E + Y+A
Sbjct: 643 IDINYYAVKKARDSNLRHRPVGMGIMGFQDCLHAMRVPYASDAAVQFADTSMEAVCYYAY 702
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMIS 608
AS ELA + G Y +Y GS +GIL D + +R DW SLR I
Sbjct: 703 WASTELAEERGRYSSYRGSLWDRGILPQDSLKLLAEERGGYVEVDHSSTMDWDSLRGRIK 762
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN L++DL G
Sbjct: 763 SYGMRNSNCIAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDFLVRDLKANG 822
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LW + + Y +GS+++I IP++L+A+Y T +E++ + LV+ A+ R +IDQ+QSLN
Sbjct: 823 LWDEVMVADLKYFDGSLARIDRIPQDLRALYATAFEVEPQWLVEAASRRQKWIDQAQSLN 882
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDV 788
I+M KL + AW +G+KT YYLRT A A K TV S LN N + V
Sbjct: 883 IYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTIGATHAEKSTVSRSSLNAVAVNGGSDGV 941
Query: 789 EANLAQ---------VVCSLK----NQEECMAC 808
A A VC+++ EEC AC
Sbjct: 942 SAVAAAAPAMPEAEGAVCTMRPGDPGFEECEAC 974
>gi|134095933|ref|YP_001101008.1| ribonucleotide-diphosphate reductase subunit alpha [Herminiimonas
arsenicoxydans]
gi|133739836|emb|CAL62887.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Herminiimonas arsenicoxydans]
Length = 966
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 311/840 (37%), Positives = 462/840 (55%), Gaps = 65/840 (7%)
Query: 4 IKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAET 63
+ +G++ P+ +++ + GL K H D + ++ +Y GV +L + A
Sbjct: 156 VTENGQRRPLDMNQVRDLITAACIGLEK-HVDADAILRETVKNLYDGVPVEELHKSAILA 214
Query: 64 AAAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIK------DMYNYYNK--RSGKKASL 115
A A+ P Y+ + R+ +H I K F + + Y+ + + G A L
Sbjct: 215 ARALMEKDPAYSTVTARLL---MHTIRKEVFGREVAQANAPAEYLVYFAEFIKKGIAAEL 271
Query: 116 VADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVS 175
+ + E +K L A+ +RD F Y G +TL Y L + + +E PQ MRV+
Sbjct: 272 LDAKLGEFDLKK---LADALKPERDLQFGYLGLQTLYDRYFLHIADQRIEMPQAFYMRVA 328
Query: 176 VGIHKDDT---DSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIY 232
+G+ ++ + A++ Y+L+S F +TPTLFN+GT + QLSSC+L + DD + GIY
Sbjct: 329 MGLALNEANREERAIEFYNLLSSFDFMSSTPTLFNSGTQRSQLSSCYLTTVADD-LGGIY 387
Query: 233 DTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGK 292
D +K+ A+++K AGG+G +R+ G++I GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 388 DAIKENALLAKYAGGLGNDWTPVRSLGAHIKGTNGRSQGVVPFLKVVNDTAVAVNQGG-K 446
Query: 293 RKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFC 352
RKGA YLE WH DI EFLDLRKN G + R D+ A W+PDLFM+RV + G+W+LF
Sbjct: 447 RKGAVCAYLETWHMDIEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVMEKGEWTLFS 506
Query: 353 PSDASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLF 407
PSDA L D G FE Y+ YE + G K+ I A LW ++L+ ETG P++ F
Sbjct: 507 PSDAPDLHDKVGKAFEEAYTGYEAKAARGELKLFKKIQALDLWRKMLSMLFETGHPWITF 566
Query: 408 KDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVS 467
KD CN +S QQ++G + SSNLCTEI ++ E AVCNL S+ +P +++
Sbjct: 567 KDPCNIRSPQQHVGVVHSSNLCTEITLNTNESEIAVCNLGSVNMPAHMK----------- 615
Query: 468 KLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGL 527
D K D +L + + L+ +ID+N+Y + R SNLRHRP+G+GI G
Sbjct: 616 ------DGK---LDHVKLQKTIRTAMRMLDNVIDINYYAVNKARDSNLRHRPVGMGIMGF 666
Query: 528 ADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQV 587
D ++ +P+ S +A Q + E + Y+A AS ELA + G Y +Y GS +GIL
Sbjct: 667 QDCLHMMRIPYASNDAVQFADNSMEAVCYYAYYASTELAEERGRYSSYKGSLWDRGILPQ 726
Query: 588 DMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D + +R +DW+ LR I + G+RNS VA PTA+ S I+G + C
Sbjct: 727 DSLKLLADERGAKYLEADYSETFDWTPLRARIKEFGMRNSNCVAIAPTATISNIIGVSAC 786
Query: 636 FEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEEL 695
EP N+Y + LSGEF +N++L++DL GLW + + + Y +GS++KI IP++L
Sbjct: 787 IEPTYQNLYVKSNLSGEFTEINEYLVRDLKARGLWDEVMISDLKYFDGSLAKIDRIPQDL 846
Query: 696 KAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
+ IY T +E++ LV+ A+ R +IDQ+QSLNI+M KL + AW +G+KT
Sbjct: 847 RDIYATAFEVEPSWLVEAASRRQKWIDQAQSLNIYMSGASGKKLDDTYKLAWLRGLKT-T 905
Query: 756 YYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQV---VCSLK----NQEECMAC 808
YYLRT A K T T LN + + + A+ C L+ EEC AC
Sbjct: 906 YYLRTMGATHTEKSTSKTGALNAVDSGGGSSTAAQSAAETDGPACILRPGDAGFEECEAC 965
>gi|115350551|ref|YP_772390.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
ambifaria AMMD]
gi|115280539|gb|ABI86056.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria AMMD]
Length = 999
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 306/770 (39%), Positives = 435/770 (56%), Gaps = 51/770 (6%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSF 94
+P + + +Y GV +Q+ + A A M P Y+ + R+ LH I +
Sbjct: 188 NPEPIVAETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 244
Query: 95 SETI--KDMYNYYNK------RSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYF 146
E + +M Y + + G A L+ D + + +K L A+ +RD F Y
Sbjct: 245 GEEVLQAEMTTRYTEYFPQFLKRGVDAGLLDDKLLQFDLKR---LGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATP 203
G +TL Y L ++ +E PQ MRV++G+ ++ D A++ Y+++S F +TP
Sbjct: 302 GLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRA 380
R D+ A W+PDLFM+RV + W+LF PS L D +G EFE Y+ YE++ G
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEI 539
Query: 381 KMV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSP 438
K+ I A++LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S
Sbjct: 540 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 EETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNK 498
E AVCNL S+ L V+ LV D L D ++L + L+
Sbjct: 600 TEIAVCNLGSVNL--------------VAHLVKQADGSYAL-DHDKLKRTISVAMRMLDN 644
Query: 499 IIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHA 558
+ID+N+Y + R SNL+HRP+G+GI G D LL P+ S A + E + Y+A
Sbjct: 645 VIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYA 704
Query: 559 LKASAELAVKDGPYETYFGSPMSKGILQVDMWN-----------ITPSDRWDWSSLREMI 607
AS ELA + G Y +Y GS +GIL D + S+ DW++LR I
Sbjct: 705 YYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSESLDWTTLRSRI 764
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTEL 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L++DL E
Sbjct: 765 AAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 824
Query: 668 GLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSL 727
GLW + + Y +G +S+I IP +L+AIY T +E+ LV+ A+ R +IDQ+QSL
Sbjct: 825 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSL 884
Query: 728 NIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
NI+M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 885 NIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 933
>gi|172059583|ref|YP_001807235.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
ambifaria MC40-6]
gi|171992100|gb|ACB63019.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria MC40-6]
Length = 999
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 310/798 (38%), Positives = 444/798 (55%), Gaps = 52/798 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G P+ + + + GL +P + + +Y GV +Q+ + A A
Sbjct: 161 NGVTRPLDMNALRELIVSACAGLGAA-VNPEPIVAETVKNLYDGVPMSQVYDSAILAART 219
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVAD 118
M P Y+ + R+ LH I + E + +M Y + + G A L+ D
Sbjct: 220 MIEKDPAYSQVTARIL---LHTIRREILGEEVLQAEMATRYTEYFPQFLKRGVDAGLLDD 276
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + +K L A+ +RD F Y G +TL Y L ++ +E PQ MRV++G+
Sbjct: 277 KLLQFDLKR---LGEALDANRDLQFGYLGLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGL 333
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+ L
Sbjct: 334 SLNEIDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEAL 392
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 393 KENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 451
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + W+LF PS
Sbjct: 452 AVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPST 511
Query: 356 ASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G EFE Y+ YE++ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 512 CPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDP 571
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ LV
Sbjct: 572 CNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHLV 617
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 618 KQADGSYAL-DQDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDC 676
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 677 LHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTL 736
Query: 591 N-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ S+ DW++LR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 737 KLLTEARGGYVEVDTSESLDWTTLRSRIAAHGMRNSNCVAIAPTATISNIIGVSACIEPT 796
Query: 640 TSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AIY
Sbjct: 797 FQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIY 856
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
T +E+ LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYLR
Sbjct: 857 ATAFEVDPTWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLR 915
Query: 760 TRAAADAIKFTVDTSVLN 777
T AA K TV LN
Sbjct: 916 TMAATHVEKSTVAHGALN 933
>gi|444731994|gb|ELW72321.1| Ribonucleoside-diphosphate reductase large subunit [Tupaia
chinensis]
Length = 447
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 277/537 (51%), Positives = 354/537 (65%), Gaps = 91/537 (16%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSF 94
D +++ KV G+Y GVT +LD LAAETAA +T HPDYA+LA R+AVSNLHK TK F
Sbjct: 2 DFLVLTMKVIQGLYSGVTMVELDTLAAETAATLTTKHPDYAILAARIAVSNLHKETKKMF 61
Query: 95 SETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERS 154
S+ ++D+YNY N +GK +S+VA +I++ N CL+ AIIYDRDF ++YFGFK LE+S
Sbjct: 62 SDVMEDLYNYINPHNGKHSSMVAKSTLDIVLANKDCLNSAIIYDRDFSYNYFGFKALEQS 121
Query: 155 YLLKMDSRVVERPQHMLMRVSVGIHKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQ 214
YLLK+ +V +RPQHMLMRVSVGIHK+D D+A++TY+L+S+ WFTHA+PTLFNAGT +P+
Sbjct: 122 YLLKISGKVADRPQHMLMRVSVGIHKEDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPE 181
Query: 215 LSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVP 274
LS+ FLL MKDDSIEGIYDTLK+CA+ISKSAGGIG+++ IRA+GSY+ GTNG+SNG+VP
Sbjct: 182 LSTYFLLNMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYLAGTNGNSNGLVP 241
Query: 275 MLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWV 334
ML+V+++TARYVDQ
Sbjct: 242 MLRVYSNTARYVDQ---------------------------------------------- 255
Query: 335 PDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMVISARKLWFEIL 394
DLFM+ V + WSL CP++ GL + WG EFE LY +YE++G V+ A++L
Sbjct: 256 -DLFMKWVETNQDWSLMCPNECPGLDEVWGEEFEKLYEKYEKQGHIHKVVKAQQL----- 309
Query: 395 NSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRY 454
NQQNLG IK SNLCTEIVE++S EE AVCNLAS+AL Y
Sbjct: 310 --------------------CNQQNLGAIKCSNLCTEIVEYTSKEEVAVCNLASLALNMY 349
Query: 455 VREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSN 514
V + +DF++LAEVT++I NLNKII+ N+YPI SN
Sbjct: 350 V-------------------TSEHTYDFKKLAEVTEVIVRNLNKIINRNYYPIPEAYVSN 390
Query: 515 LRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGP 571
RH PIGIG+Q LAD FIL+ PFESPE Q LNK IF+TIYY AL+AS +LA + GP
Sbjct: 391 KRHHPIGIGVQVLADAFILMRYPFESPEVQLLNKQIFQTIYYGALEASCDLAKEYGP 447
>gi|427400630|ref|ZP_18891868.1| ribonucleoside-diphosphate reductase, alpha subunit [Massilia
timonae CCUG 45783]
gi|425720143|gb|EKU83066.1| ribonucleoside-diphosphate reductase, alpha subunit [Massilia
timonae CCUG 45783]
Length = 976
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 311/797 (39%), Positives = 446/797 (55%), Gaps = 57/797 (7%)
Query: 8 GRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAM 67
G + + + + A + GL K H D + + +Y GV +L + A A A+
Sbjct: 156 GERRLLDINDVHALVNAACSGLEK-HVDADAIVAETLKNLYDGVPVEELYKSAILAARAL 214
Query: 68 TVNHPDYALLAGRVAVSNLHKITKNSFSETI------KDMYNYYNK--RSGKKASLVADD 119
P Y+ + R+ LH I K F + + Y+ + G +A L+ ++
Sbjct: 215 MEKDPAYSQVTARIL---LHTIRKEVFGHEVPQAGAAAEYLTYFPQYVAKGIQAELLDEE 271
Query: 120 VYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI- 178
+ + ++ L AI+ DRD F Y G +TL Y L + +E PQ MRV++G+
Sbjct: 272 LGKYDLER---LAKAIVADRDLQFGYIGLQTLYDRYFLHVRDVRIEMPQAFYMRVAMGLA 328
Query: 179 -HKDDTDS-ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLK 236
+DD ++ A++ Y+L+S F +TPTLFN+GT + QLSSC+L + DD +EGIYD +K
Sbjct: 329 LREDDREARAIEFYNLLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVGDD-LEGIYDAIK 387
Query: 237 KCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGA 296
+ A++SK AGG+G +RA GS I GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 388 ENALLSKFAGGLGNDWTPVRALGSRIKGTNGRSQGVVPFLKVVNDTAVAVNQGG-KRKGA 446
Query: 297 FAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDA 356
YLE WH DI EFLDLRKN G + R D+ A W+PDLFM+RV + G W+LF PS+
Sbjct: 447 VCAYLETWHLDIEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVMEKGSWTLFSPSET 506
Query: 357 SGLADSWGIEFEHLYSQYE-EEGRAKMV----ISARKLWFEILNSQIETGTPYMLFKDSC 411
L D G FE Y YE + +M I A LW ++L+ ETG P++ FKD C
Sbjct: 507 PDLHDLTGKAFEKAYLAYETKAANGEMAVFKKIEAMDLWRKMLSMLFETGHPWITFKDPC 566
Query: 412 NRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVG 471
N +S QQ++G + SSNLCTEI +S +E AVCNL S+ LP++++ G+
Sbjct: 567 NIRSPQQHVGVVHSSNLCTEITLNTSADEIAVCNLGSVNLPQHMKGDGL----------- 615
Query: 472 SRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTF 531
D +L + + L+ +ID+N+Y +E R SNLRHRP+G+G+ G D
Sbjct: 616 ---------DHVKLQKTIRTAMRMLDNVIDINYYAVEKARNSNLRHRPVGMGVMGHQDCL 666
Query: 532 ILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWN 591
++ +PF S +A + E + Y+A AS ELA + G YETY GS +GIL D
Sbjct: 667 HMMRIPFASEQAVKFADVSMEAVCYYAYLASTELAEERGRYETYTGSLWDRGILPQDSIK 726
Query: 592 ITPSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
+ +R DW+ +RE I + G+RNS VA PTA+ S I+G + C EP
Sbjct: 727 LLAEERGGYLEQDTSESMDWTPVRERIKQFGMRNSNCVAIAPTATISNIIGVSACIEPTF 786
Query: 641 SNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYK 700
N+Y + LSGEF +N +L++DL LW + + Y +GS+SKI +P++L+ IY
Sbjct: 787 QNLYVKSNLSGEFTEINSYLVRDLKARDLWDEVMIADLKYFDGSLSKIDRVPQDLRDIYA 846
Query: 701 TVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRT 760
T +E++ K LV+ A+ R +IDQ+QSLNI+M KL + AW +G+KT YYLRT
Sbjct: 847 TAFEVEPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDETYKLAWLRGLKT-TYYLRT 905
Query: 761 RAAADAIKFTVDTSVLN 777
AA K T T LN
Sbjct: 906 IAATHLEKSTTRTGALN 922
>gi|345302305|ref|YP_004824207.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodothermus
marinus SG0.5JP17-172]
gi|345111538|gb|AEN72370.1| ribonucleoside-diphosphate reductase, alpha subunit [Rhodothermus
marinus SG0.5JP17-172]
Length = 926
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 313/834 (37%), Positives = 456/834 (54%), Gaps = 58/834 (6%)
Query: 5 KRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETA 64
+ DG + P + + AR++ GL + DP LV +++ VY G+ +LD+ A
Sbjct: 120 RADGTEAPFPHEALRARIEAACDGL--DDVDPELVREELLRTVYPGIPEDELDKALILAA 177
Query: 65 AAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVAD------ 118
PDY +A R+ + L++ F + R G +A L
Sbjct: 178 RTHIEREPDYTYVAARLLLDALYR---EVFGRPVPPAEQAATCRRGFRAYLEHGIRLGRL 234
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLL-KMDSRVVERPQHMLMRVSVG 177
D + + L A+ +RD F + G +TL YLL + + R E PQ++ MRV++G
Sbjct: 235 DERLLQTFDLDRLAAALRPERDRQFTFLGLQTLYDRYLLHEPEGRRFELPQYLWMRVAMG 294
Query: 178 I---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ D T A++ Y L+S F ++TPTLFNAGTP PQLSSC+L ++DD + I+
Sbjct: 295 LALAEDDPTARAIQFYELLSSFRFMNSTPTLFNAGTPHPQLSSCYLTTVQDD-LGAIFKA 353
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
++ A++SK AGG+G +RA G++I GTNG S G++P L++ NDTA V+QGG KRK
Sbjct: 354 IRDNALLSKWAGGLGNDWTPVRALGAHIRGTNGRSQGVIPFLKIVNDTAVAVNQGG-KRK 412
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EFL+LR+N G E R D+ A W+PDLFM+RVR+ W+LF P
Sbjct: 413 GAVCAYLEVWHLDIEEFLELRRNTGDERRRTHDMNTACWIPDLFMQRVRERRHWTLFSPD 472
Query: 355 DASGLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETGTPYMLFKD 409
+ L D +G F Y YE E A + + A LW ++L+ ETG P++ FKD
Sbjct: 473 EVPDLHDLYGRAFRERYEHYEREAEAGRIRNWRRVEAVDLWRKMLSMLFETGHPWLTFKD 532
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
CN +S Q ++G + SSNLCTEI +SPEE AVCNL SI L +V E+G
Sbjct: 533 PCNIRSPQDHVGIVHSSNLCTEITLNTSPEEVAVCNLGSINLVAHVDEQGE--------- 583
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
D +RL + + L+ +ID+N YPI R SNLRHRPIG+G+ G D
Sbjct: 584 ----------LDRDRLRDTIRTAVRMLDNVIDLNFYPIPEARTSNLRHRPIGLGLMGFQD 633
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGIL---- 585
GL + S A ++ ++ E I Y A +AS++LAV+ G Y T+ GS +G+L
Sbjct: 634 VLYRRGLSYASEAAVEMADELMEFIAYCAYEASSDLAVERGAYPTFKGSKWDRGLLPLDT 693
Query: 586 ----QVDMWNITP---SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
+ + P + R DW +LRE I + G+RN+ ++A PTA+ + I G + EP
Sbjct: 694 LDLLEAERGEPVPVPRTARLDWDALREKIRRQGMRNANVLAIAPTATIANICGVSPSIEP 753
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N+Y + LSGEF +N +L++DL GLW + + Y +GSV +I IP ELK
Sbjct: 754 TYKNLYVKSNLSGEFTQLNPYLVRDLKARGLWDEEMLDDLKYYDGSVQEIDRIPPELKER 813
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y+T +EI+ + L++ AA R +IDQSQSLN+++ +P KL+ ++ AW G+KT YYL
Sbjct: 814 YRTAFEIEPRWLIECAARRQKWIDQSQSLNLYLAEPSGRKLSEMYQLAWRLGLKT-TYYL 872
Query: 759 RTRAAADAIKFTVDTSVLNNE----KANRADNDVEANLAQVVCSLKNQEECMAC 808
R AA K T+D + + K+ +D+ CS + E C AC
Sbjct: 873 RALAATQIEKSTLDINRRGIQPRWMKSRSPSSDIVVRRDGPACS-PDDESCEAC 925
>gi|386288749|ref|ZP_10065889.1| ribonucleotide-diphosphate reductase subunit alpha [gamma
proteobacterium BDW918]
gi|385278304|gb|EIF42276.1| ribonucleotide-diphosphate reductase subunit alpha [gamma
proteobacterium BDW918]
Length = 965
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 306/804 (38%), Positives = 447/804 (55%), Gaps = 63/804 (7%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG + P+ ++ +++ GLS V + +Y GV +++ TA A
Sbjct: 152 DGTESPLDVGRLEFIVQEACEGLSDVSAQEV--QDEALKSLYNGVPQEEVNTSLVITARA 209
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSF----SETIKDMYNYYNK------RSGKKASLV 116
M +Y+L+ R+ + L N S T DM YY + R G + L+
Sbjct: 210 MVEKEHNYSLVTARLLLDKLRAEALNFLGVAQSATQHDMAIYYPQALPIYLRKGAELELL 269
Query: 117 ---ADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMR 173
+ Y++ A L AI +RD F Y G +TL Y + + +E PQ MR
Sbjct: 270 DPRLESEYDV-----AALGEAIKPERDMQFHYLGLQTLYDRYFIHSNEVRIELPQIFFMR 324
Query: 174 VSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
V++G+ ++ D A++ Y L+S + +TPTLFNAGT +PQLSSC+L + DD + G
Sbjct: 325 VAMGLAMNEEDRNARAIEFYDLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LHG 383
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY ++ A++SK AGG+G +R G+YI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 384 IYGAIQDNAMLSKYAGGLGNDWTPVRGLGAYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 443
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV DG W+L
Sbjct: 444 -KRKGAVCAYLESWHIDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFQDGDWTL 502
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEE---EGRAKMV--ISARKLWFEILNSQIETGTPYM 405
F P++ L D +G FE + YEE +G K+ + A LW +IL+ ETG P++
Sbjct: 503 FSPNNVPDLHDLYGKAFEERFEHYEELTRKGEIKLYKRVKAADLWRKILSMLFETGHPWI 562
Query: 406 LFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSN 465
FKD CN +S QQ++G + SSNLCTEI +S +E AVCNL S+ L +++ + G+
Sbjct: 563 TFKDPCNLRSPQQHVGVVHSSNLCTEITLNTSKDEIAVCNLGSVNLAQHIGDNGL----- 617
Query: 466 VSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQ 525
D ++ + K L+ +ID+N+Y + + SN +HRP+G+G+
Sbjct: 618 ---------------DLAKVEKTVKTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGLM 662
Query: 526 GLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGIL 585
G D LP+ S EA + E I Y+A+KAS++LA + G Y++Y GS S+GIL
Sbjct: 663 GFQDALYKQHLPYSSDEAVEFADRSMEAISYYAIKASSDLAAERGSYQSYEGSLWSRGIL 722
Query: 586 QVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNN 633
+D I +R DW SLRE++ G+RNS ++A PTA+ + I G +
Sbjct: 723 PIDSVEILVQERGADYIEVDRSQTLDWDSLREVVKAQGMRNSNVMAIAPTATIANITGVS 782
Query: 634 ECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPE 693
+ EP N+Y + LSGEF VVN +L+KDL GLW + + Y GSVSKI IP+
Sbjct: 783 QSIEPTYQNLYVKSNLSGEFTVVNPYLVKDLKARGLWDAVMVNDLKYYEGSVSKIDRIPD 842
Query: 694 ELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKT 753
+LKA+Y T +E++ + LVD A+ R ++DQ+QSLN+++ + KL + AW +G+KT
Sbjct: 843 DLKALYATAFEVEPRWLVDAASRRQKWLDQAQSLNLYIAGANGKKLDITYRMAWYRGLKT 902
Query: 754 GMYYLRTRAAADAIKFTVDTSVLN 777
YYLR AA+ K TV +N
Sbjct: 903 -TYYLRALAASSTEKSTVSQGSMN 925
>gi|170699975|ref|ZP_02891002.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria IOP40-10]
gi|170135123|gb|EDT03424.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria IOP40-10]
Length = 999
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 310/798 (38%), Positives = 444/798 (55%), Gaps = 52/798 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G P+ + + + GL +P + + +Y GV +Q+ + A A
Sbjct: 160 NGVTRPLDMNALRELIVSACAGLGAA-VNPEPIVAETVKNLYDGVPMSQVYDSAILAART 218
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVAD 118
M P Y+ + R+ LH I + E + +M Y + + G A L+ D
Sbjct: 219 MIEKDPAYSQVTARIL---LHTIRREILGEEVLQAEMSTRYTEYFPQFLKRGVDAGLLDD 275
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + +K L A+ +RD F Y G +TL Y L ++ +E PQ MRV++G+
Sbjct: 276 KLLQFDLKR---LGEALDANRDLQFGYLGLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGL 332
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+ L
Sbjct: 333 SLNEIDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEAL 391
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 392 KENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 450
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + W+LF PS
Sbjct: 451 AVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGTDWTLFSPST 510
Query: 356 ASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G EFE Y+ YE++ G K+ I A++LW ++L ETG P++ FKD
Sbjct: 511 CPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDP 570
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ LV
Sbjct: 571 CNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHLV 616
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 617 KQADGSYAL-DHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDC 675
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 676 LHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTL 735
Query: 591 N-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ S+ DW++LR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 736 KLLTEARGGYVEVDTSESLDWTTLRSRIAAHGMRNSNCVAIAPTATISNIIGVSACIEPT 795
Query: 640 TSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AIY
Sbjct: 796 FQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIY 855
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
T +E+ LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYLR
Sbjct: 856 ATAFEVDPTWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLR 914
Query: 760 TRAAADAIKFTVDTSVLN 777
T AA K TV LN
Sbjct: 915 TMAATHVEKSTVAHGALN 932
>gi|90022103|ref|YP_527930.1| ribonucleotide-diphosphate reductase subunit alpha [Saccharophagus
degradans 2-40]
gi|89951703|gb|ABD81718.1| ribonucleoside-diphosphate reductase class Ia alpha subunit
[Saccharophagus degradans 2-40]
Length = 969
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 308/809 (38%), Positives = 450/809 (55%), Gaps = 65/809 (8%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V+ +G + P+ D+I + + GL D +L ++ +Y GV+ T L+
Sbjct: 154 VVDHNGDRHPLDIDRIKTVVAEACAGLKDVDADAIL--KEAMRSLYDGVSLTDLNTALVI 211
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSF-----SETIKDMYNYYNK------RSGK 111
+A + P+Y R+ + L + SF T +M Y K G
Sbjct: 212 SARTLVEKEPNYTYATSRLLMDKL-RAEALSFLGIAEEATQAEMETLYAKTLPAYIEKGI 270
Query: 112 KASLVADDV--YEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQH 169
+ L++ D+ Y++ M L A+I +RD F Y G +TL Y L + +E PQ
Sbjct: 271 ELDLISPDLASYDLNM-----LGNALIAERDLQFTYLGLQTLYDRYFLHSNDVRIELPQI 325
Query: 170 MLMRVSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDD 226
MRV++G+ ++ + A++ Y L+S + +TPTLFNAGT +PQLSSC+L + DD
Sbjct: 326 FFMRVAMGLAANEENKNERAVEFYRLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD 385
Query: 227 SIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYV 286
+ GIY ++ A++SK AGG+G +R G+YI GTNG S G+VP L+V NDTA V
Sbjct: 386 -LHGIYGAMQDNAMLSKWAGGLGNDWTPVRGLGAYIKGTNGKSQGVVPFLKVANDTAVAV 444
Query: 287 DQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDG 346
+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ A WVPDLFM+RV ++
Sbjct: 445 NQGG-KRKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVFEEK 503
Query: 347 KWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEILNSQIETG 401
+W+LF P+D L D +G FE Y +YE + A + + A LW ++L ETG
Sbjct: 504 EWTLFSPNDVPDLHDLFGRAFEDRYEEYERQAAAGKIRVHKKVRALDLWRKMLGMLFETG 563
Query: 402 TPYMLFKDSCNRKSNQQNLGTIKSSNLCTEI-VEFSSPEETAVCNLASIALPRYVREKGV 460
P++ FKD+CN +S QQ+ G + SSNLCTEI + + EE AVCNL SI L +++
Sbjct: 564 HPWITFKDACNLRSPQQHAGVVHSSNLCTEITLNTKANEEIAVCNLGSINLAQHIV---- 619
Query: 461 PVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPI 520
D K D E+LA+ K L+ +ID+N+Y +E+ R SN+RHRP+
Sbjct: 620 -------------DGK---LDEEKLAQTVKTAVRMLDNVIDINYYAVESARTSNMRHRPV 663
Query: 521 GIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPM 580
G+G+ G D + + + S +A E I YHA+KAS+ELA + G Y T+ GS
Sbjct: 664 GLGLMGFQDALYKMNISYSSDDAVTFADRSMEAISYHAIKASSELAKERGSYSTFDGSLW 723
Query: 581 SKGILQVDMWNITPSDRW------------DWSSLREMISKNGVRNSLLVAPMPTASTSQ 628
SKGIL +D ++ +R DW +LRE + G+RNS ++A PTA+ +
Sbjct: 724 SKGILPLDSLDLLIENRGEKFIKVDKSSTHDWDTLRETVKTQGMRNSNVMAIAPTATIAN 783
Query: 629 ILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKI 688
I G ++ EP N+Y + LSGEF VVN +L+ DL E GLW + + Y GS+ KI
Sbjct: 784 ITGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVHDLKERGLWDSVMVNDLKYYEGSLQKI 843
Query: 689 SEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWS 748
IPE+LKA+Y T +E++ + +V+ A+ R +IDQ+QSLN+++ + KL + AW
Sbjct: 844 DRIPEDLKALYSTAFEVEPRWIVEAASRRQKWIDQAQSLNLYIAGANGKKLDITYRMAWY 903
Query: 749 KGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
G+KT YYLR +A K TV + LN
Sbjct: 904 SGLKT-TYYLRALSATTTEKSTVTSGTLN 931
>gi|451333815|ref|ZP_21904398.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Amycolatopsis azurea DSM 43854]
gi|449423584|gb|EMD28906.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Amycolatopsis azurea DSM 43854]
Length = 987
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 300/793 (37%), Positives = 442/793 (55%), Gaps = 53/793 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG P+ + +++ + + GL +PVL K +Y G++ +L A
Sbjct: 138 DGSLRPLDWARVSHVVGEAVAGLDDVSAEPVLAEAK--RNLYDGISADELALAQIMAARV 195
Query: 67 MTVNHPDYALLAGRV--------AVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
+ P+Y+ ++ R+ A+S L + + + + + Y Y + K+A +
Sbjct: 196 LVEQEPNYSYVSARLLADKLRGEALSYLAGVPQQASQDEMTTRYPQYFRDYLKRAIELEL 255
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG- 177
E+ + + AI +RD DF + G +TL Y + E PQ MRV++G
Sbjct: 256 VNPELQTFDLDKITAAIHAERDLDFGFLGLQTLYDRYFQHHNGVRFELPQAFFMRVAMGL 315
Query: 178 -IHKDDTDS-ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
I +DD ++ A++ Y L+S F +TPTLFN+GT +PQLSSCFL + DD ++ I+
Sbjct: 316 AIREDDREARAIEFYELLSSFHFMASTPTLFNSGTTRPQLSSCFLTTV-DDDLDSIFQAY 374
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K A+++K +GG+G +R G++I GTNG S G+VP L++ NDTA V+QGG KRKG
Sbjct: 375 KNNALLAKYSGGLGNDWTPVRGLGAHIKGTNGQSQGVVPFLKIANDTAVAVNQGG-KRKG 433
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFLDLRKN G + R D+ A WVPD F+ RV D +W+LF P++
Sbjct: 434 AACAYLETWHVDIEEFLDLRKNTGDDRRRTHDMNTANWVPDEFLRRVEADAQWTLFSPNE 493
Query: 356 ASGLADSWGIEFEHLYSQYE---EEGRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G F Y +YE E G K+ + A LW +L ETG P++ FKD
Sbjct: 494 TPDLHDLYGTAFAERYREYEAAAERGELKVFRKVRAIDLWRRMLTMLFETGHPWITFKDP 553
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI ++ +E AVCNL S+ L ++V +G+
Sbjct: 554 CNLRSPQQHVGVVHSSNLCTEITLNTTTDEVAVCNLGSVNLLKHVTPEGI---------- 603
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D +RL + + L+ +ID+N Y I RRSNLRHRPIG+G+ G D
Sbjct: 604 ----------DAKRLEKTVRTAVRMLDNVIDINFYTIPEARRSNLRHRPIGLGLMGFQDA 653
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGIL----- 585
+G+P S EA Q E I Y+A+ AS +LA + G Y+T+ GS SKGIL
Sbjct: 654 LFEIGVPLSSEEAVQFADTSMEHISYYAISASTDLAEERGQYQTFEGSLWSKGILPIDSM 713
Query: 586 -------QVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
Q D ++ S DW+ LRE + G+RNS ++A PTA+ S I+G + EP
Sbjct: 714 QLLIDARQGDALDVDTSSTLDWAPLRERVKTVGMRNSNVMAIAPTATISNIVGVGQSIEP 773
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N++ + +SG+F VVN HL++ L E GLW + + + Y +GS+ +I +P++LKA+
Sbjct: 774 LFQNLFVKSNMSGDFTVVNPHLVRSLKERGLWDEVMVSDLKYFDGSLGQIDRVPDDLKAL 833
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +EI+ K LVD + R +IDQ+QSLN+++ P KL L+ YAW KG+KT YYL
Sbjct: 834 YATAFEIESKWLVDAGSRRQKWIDQAQSLNLYIAAPSGRKLDELYRYAWHKGLKT-TYYL 892
Query: 759 RTRAAADAIKFTV 771
R R+A K T+
Sbjct: 893 RARSATHVEKSTL 905
>gi|209521090|ref|ZP_03269820.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. H160]
gi|209498473|gb|EDZ98598.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. H160]
Length = 1003
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 302/765 (39%), Positives = 433/765 (56%), Gaps = 48/765 (6%)
Query: 38 LVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------ITK 91
+VA+ V +Y GV +Q+ + A A M P Y+ + R+ + + + +T+
Sbjct: 188 IVAETV-KNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQ 246
Query: 92 NSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTL 151
E + + + KR G A L+ D + + +K L A+ +RD F Y G +TL
Sbjct: 247 AEMGERYAEYFPQFIKR-GIGAGLLDDKLQQFDLKR---LGAALDANRDLQFGYLGLQTL 302
Query: 152 ERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNA 208
Y L D +E PQ MRV++G+ ++ D A++ Y+++S F +TPTLFN+
Sbjct: 303 YDRYFLHHDGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNILSSFDFMSSTPTLFNS 362
Query: 209 GTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGS 268
GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I GTNG
Sbjct: 363 GTHRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGK 421
Query: 269 SNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDL 328
S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+
Sbjct: 422 SQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDM 480
Query: 329 FYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAKMV-- 383
A W+PDLFM+RV + G W+LF PS L D +G EFE Y+ YE++ G K+
Sbjct: 481 NTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKK 540
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAV 443
+ A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S E AV
Sbjct: 541 LPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAV 600
Query: 444 CNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVN 503
CNL S+ L +++E+ D ++L + L+ +ID+N
Sbjct: 601 CNLGSVNLVAHLKEQA---------------DGTLALDHDKLKRTVSVAMRMLDNVIDIN 645
Query: 504 HYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASA 563
+Y + R SNL+HRP+G+GI G D +L P+ S EA + E + Y+A AS
Sbjct: 646 YYAVAKARNSNLKHRPVGLGIMGFQDCLHMLRTPYASQEAVEFADRSMEAVCYYAYYAST 705
Query: 564 ELAVKDGPYETYFGSPMSKGILQVD-----------MWNITPSDRWDWSSLREMISKNGV 612
ELA + G Y +Y GS +GIL D + S+ DW +LR I+ G+
Sbjct: 706 ELAEERGRYSSYRGSLWDRGILPQDSVALLAEARGGYVEVDSSESMDWPALRSRIATYGM 765
Query: 613 RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSH 672
RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL GLW
Sbjct: 766 RNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDE 825
Query: 673 ALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHME 732
+ + Y +G++S+I IP +L+AIY T +E+ LV+ A+ R +IDQ+QSLNI+M
Sbjct: 826 VMVADLKYFDGTLSRIDRIPADLRAIYATAFEVDPVWLVESASRRQKWIDQAQSLNIYMA 885
Query: 733 QPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 886 GASGKKLDEIYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALN 929
>gi|421895461|ref|ZP_16325862.1| ribonucleoside reductase 1 (large chain) protein [Ralstonia
solanacearum MolK2]
gi|206586626|emb|CAQ17212.1| ribonucleoside reductase 1 (large chain) protein [Ralstonia
solanacearum MolK2]
Length = 987
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 302/772 (39%), Positives = 438/772 (56%), Gaps = 49/772 (6%)
Query: 32 EHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK--- 88
+ DP + ++ +Y+GV +Q+ + A A + P Y+ R+ + + +
Sbjct: 180 DAVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREIL 239
Query: 89 ---ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEI-IMKNAACLDGAIIYDRDFDFD 144
+T+ + D + + KR G A L+ D + + + K A LD + RD F+
Sbjct: 240 GEEVTQAEMAARYVDYFPQFIKR-GINAGLLDDTLAQFDLAKLGAALDAS----RDLQFN 294
Query: 145 YFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHA 201
Y G +TL Y L + + +E PQ MRV++G+ ++ D A++ Y L+S F +
Sbjct: 295 YLGLQTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAIEFYQLLSSFDFMSS 354
Query: 202 TPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSY 261
TPTLFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G N+RA GS+
Sbjct: 355 TPTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSH 413
Query: 262 IHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKE 321
I GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 414 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDD 472
Query: 322 ECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE-GRA 380
R D+ A W+PDLFM+RV ++G+W+LF PS L D G FE Y YEE+ R
Sbjct: 473 RRRTHDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGRAFEQAYLGYEEKVARG 532
Query: 381 KMVI----SARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFS 436
++ + A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +
Sbjct: 533 EITLFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNT 592
Query: 437 SPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENL 496
+ E AVCNL S+ L V+ LV D L D ++L + +I L
Sbjct: 593 NDSEIAVCNLGSVNL--------------VAHLVQQADGSYAL-DHDKLKKTVRIAMRML 637
Query: 497 NKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYY 556
+ +ID+N+Y ++ R SNLRHRP+G+G+ G D +L +P+ + A Q E + Y
Sbjct: 638 DNVIDINYYAVKKARDSNLRHRPVGLGVMGFQDALHVLRIPYANEAAVQFADTSMEAVCY 697
Query: 557 HALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLRE 605
+A AS ELA + G Y TY GS +GIL D + +R DW SLR
Sbjct: 698 YAYWASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLEADLSSTMDWDSLRG 757
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLT 665
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL
Sbjct: 758 RIQQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLK 817
Query: 666 ELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQ 725
GLW + + Y +GS+++I IP++L+ +Y T +E++ + LV+ A+ R +IDQ+Q
Sbjct: 818 ARGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQ 877
Query: 726 SLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
SLNI+M L + AW +G+KT YYLRT A K TV LN
Sbjct: 878 SLNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTLN 928
>gi|171318521|ref|ZP_02907673.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria MEX-5]
gi|171096307|gb|EDT41213.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria MEX-5]
Length = 1001
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 309/798 (38%), Positives = 443/798 (55%), Gaps = 52/798 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G P+ + + + GL +P + + +Y GV +Q+ + A A
Sbjct: 161 NGVTRPLDMNALRELIVSACAGLGAA-VNPEPIVAETVKNLYDGVPMSQVYDSAILAART 219
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETI--KDMYNYYNK------RSGKKASLVAD 118
M P Y+ + R+ LH I + E + +M Y + + G A L+ D
Sbjct: 220 MIEKDPAYSQVTARIL---LHTIRREILGEEVLQAEMSTRYTEYFPQFLKRGVDAGLLDD 276
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
+ + +K L A+ +RD F Y G +TL Y L ++ +E PQ MRV++G+
Sbjct: 277 KLLQFDLKR---LGEALDANRDLQFGYLGLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGL 333
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ Y+++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+ L
Sbjct: 334 SLNEIDRETRAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEAL 392
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 393 KENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 451
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + W+LF PS
Sbjct: 452 AVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPST 511
Query: 356 ASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G +FE Y+ YE++ G K+ I A +LW ++L ETG P++ FKD
Sbjct: 512 CPDLHDKFGADFEKAYTAYEDKVARGEIKLFKKIPAAQLWRKMLGMLFETGHPWITFKDP 571
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI +S E AVCNL S+ L V+ LV
Sbjct: 572 CNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNL--------------VAHLV 617
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D L D ++L + L+ +ID+N+Y + R SNL+HRP+G+GI G D
Sbjct: 618 KQADGSYAL-DHDKLKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDC 676
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW 590
LL P+ S A + E + Y+A AS ELA + G Y +Y GS +GIL D
Sbjct: 677 LHLLRTPYASEAAVEFADRSMEAVCYYAYHASTELAEERGRYSSYRGSLWDRGILPQDTL 736
Query: 591 N-----------ITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ S+ DW++LR I+ +G+RNS VA PTA+ S I+G + C EP
Sbjct: 737 KLLAEARGGYVEVDTSESLDWTALRARIAAHGMRNSNCVAIAPTATISNIIGVSACIEPT 796
Query: 640 TSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIY 699
N+Y + LSGEF VVN++L++DL E GLW + + Y +G +S+I IP +L+AIY
Sbjct: 797 FQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIY 856
Query: 700 KTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLR 759
T +E+ LV+ A+ R +IDQ+QSLNI+M KL ++ AW +G+KT YYLR
Sbjct: 857 ATAFEVDPTWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLR 915
Query: 760 TRAAADAIKFTVDTSVLN 777
T AA K TV LN
Sbjct: 916 TMAATHVEKSTVAHGALN 933
>gi|344172466|emb|CCA85109.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
syzygii R24]
Length = 987
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 303/772 (39%), Positives = 439/772 (56%), Gaps = 49/772 (6%)
Query: 32 EHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK--- 88
E DP + ++ +Y+GV +Q+ + A A + P Y+ + R+ + + +
Sbjct: 180 EAVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQVTARILLHTIRREIL 239
Query: 89 ---ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEI-IMKNAACLDGAIIYDRDFDFD 144
+T+ + D + + KR G A L+ + + + + K A LD + RD F+
Sbjct: 240 GEEVTQAEMAARYADYFPQFIKR-GINAGLLDEKLAQFDLAKLGAALDAS----RDLQFN 294
Query: 145 YFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHA 201
Y G +TL Y L + + +E PQ MRV++G+ ++ D A++ Y L+S F +
Sbjct: 295 YLGLQTLFDRYFLHISEKRIEMPQAFFMRVAMGLSLNEIDRESRAIEFYQLLSSFDFMSS 354
Query: 202 TPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSY 261
TPTLFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G N+RA GS+
Sbjct: 355 TPTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSH 413
Query: 262 IHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKE 321
I GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 414 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDD 472
Query: 322 ECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---G 378
R D+ A W+PDLFM+RV ++G+W+LF PS L D G FE Y YEE+ G
Sbjct: 473 RRRTHDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGKAFETAYLGYEEKVARG 532
Query: 379 RAKMV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFS 436
K+ + A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +
Sbjct: 533 EIKLFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNT 592
Query: 437 SPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENL 496
+ E AVCNL S+ L V+ L+ D L D ++L + + L
Sbjct: 593 NDSEIAVCNLGSVNL--------------VAHLIKQADGSVAL-DHDKLKKTVRTAMRML 637
Query: 497 NKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYY 556
+ +ID+N+Y ++ R SNLRHRP+G+GI G D+ +L +P+ S A Q E + Y
Sbjct: 638 DNVIDINYYAVKKARDSNLRHRPVGLGIMGFQDSLHVLRIPYASEVAVQFADTSMEAVCY 697
Query: 557 HALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLRE 605
+A AS ELA + G Y TY GS +GIL D + +R DW SLR
Sbjct: 698 YAYWASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLEADLSSSMDWDSLRA 757
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLT 665
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL
Sbjct: 758 RIQQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLK 817
Query: 666 ELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQ 725
GLW + + Y +GS+++I IP++L+ +Y T +E++ + LV+ A+ R +IDQ+Q
Sbjct: 818 ARGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQ 877
Query: 726 SLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
SLNI+M L + AW +G+KT YYLRT A K TV LN
Sbjct: 878 SLNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTLN 928
>gi|398859181|ref|ZP_10614861.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM79]
gi|398237322|gb|EJN23075.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM79]
Length = 964
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 313/843 (37%), Positives = 453/843 (53%), Gaps = 66/843 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+ + DG P+ ++ + + GL E D L+ ++ +Y GV T ++
Sbjct: 150 ITRADGSLAPLDMGRLNTIVTEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVM 207
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSF----SETIKDMYNYYNKRSGKKASLVAD 118
TA + P+Y+ + R+ + L N S T +M + Y K A +
Sbjct: 208 TARTLVEREPNYSFVTARLLMDTLRAEGLNFLGVAESATHHEMVDLYAK--ALPAYIAKG 265
Query: 119 DVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMR 173
+E++ A D AI ++RD F Y G +TL Y + D E PQ MR
Sbjct: 266 IEFELLNPVLASFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQIFFMR 325
Query: 174 VSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
V++G+ K+ D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + G
Sbjct: 326 VAMGLAIEEKNKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSG 384
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY + A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 385 IYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 444
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+L
Sbjct: 445 -KRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTL 503
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPY 404
F PS+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P+
Sbjct: 504 FSPSEVPDLHDLTGKAFEERYEYYEALSEYPGKIKLFKTIQAKDLWRKMLSMLFETGHPW 563
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 564 LTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI--------- 614
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
N D +L L+ +ID+N+Y + + SN +HRP+G+GI
Sbjct: 615 -----------TNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGI 663
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGI
Sbjct: 664 MGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGI 723
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D I R DW+ +R + K G+RNS ++A PTA+ + I G
Sbjct: 724 LPLDSQQILIEQRGQKYIDVDLNETLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGV 782
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP
Sbjct: 783 SQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIP 842
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ELK +Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+K
Sbjct: 843 QELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLK 902
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEEC 805
T YYLR AA K T++T LN + N D+ V C++ ++ +C
Sbjct: 903 T-TYYLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAI-DEPDC 960
Query: 806 MAC 808
AC
Sbjct: 961 EAC 963
>gi|392950909|ref|ZP_10316464.1| ribonucleoside-diphosphate reductase, subunit alpha
[Hydrocarboniphaga effusa AP103]
gi|391859871|gb|EIT70399.1| ribonucleoside-diphosphate reductase, subunit alpha
[Hydrocarboniphaga effusa AP103]
Length = 954
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 306/764 (40%), Positives = 429/764 (56%), Gaps = 57/764 (7%)
Query: 47 VYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNL-HKI--------TKNSFSET 97
+Y G+ +L + A A P+Y ++ R+ + L H+ T+ +F E
Sbjct: 167 LYDGIPEAELSQAVTLAARARIEKEPNYTYVSARLLMDGLRHEALKFLRMSETRPTFEE- 225
Query: 98 IKDMY-NYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYL 156
+K +Y +Y+ + + L D ++ + + L A++ DRD FDY G +TL Y
Sbjct: 226 MKAIYPDYFREYIHRAIELELLDP-KLALFDLDTLGKALLADRDAKFDYLGLQTLYDRYF 284
Query: 157 LKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQP 213
+ + E PQ MRV++G+ ++ D A++ Y L+S F +TPTLFN+GTP+P
Sbjct: 285 IHSNKTRFELPQAFFMRVAMGLAMNEIDRETRAIEFYTLLSSFDFMSSTPTLFNSGTPRP 344
Query: 214 QLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIV 273
QLSSC+L + DD + GI+ + A++SK AGG+G +R G +I GTNG SNG+V
Sbjct: 345 QLSSCYLTQVPDD-LHGIFGAIHDNAMLSKFAGGLGNDWTPVRGMGGWIKGTNGKSNGVV 403
Query: 274 PMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALW 333
P L+V NDT V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ A W
Sbjct: 404 PFLKVANDTCVAVNQGG-KRKGALCAYLETWHRDIEEFLELRKNTGDDRRRTHDMNTANW 462
Query: 334 VPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYE---EEGRAKMV--ISARK 388
VPDLFM+RV +DG W+LF P + L + G FE Y +YE EEGR K I A
Sbjct: 463 VPDLFMKRVMEDGPWTLFSPDETPDLHELVGEAFEKKYVEYEKLAEEGRLKNTKRIQALG 522
Query: 389 LWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEI-VEFSSPEETAVCNLA 447
LW ++L+ ETG P++ FKD CN +S QQ++G + SSNLCTEI + + +E AVCNL
Sbjct: 523 LWRKMLSMLFETGHPWITFKDPCNLRSPQQHVGVVHSSNLCTEITLNTKANQEIAVCNLG 582
Query: 448 SIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPI 507
S+ LP ++ +G D +L L+ +I+ N+Y +
Sbjct: 583 SVNLPAHITAEGK-------------------LDKAKLERTITTAMRMLDNVIEYNYYSV 623
Query: 508 ETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAV 567
T R SNLRHRP+G+G+ G D L LP+ES A E I Y+ALKASA+LA+
Sbjct: 624 PTARNSNLRHRPVGLGVMGFNDALYKLRLPYESDRAISFADYSMEAISYYALKASADLAI 683
Query: 568 KDGPYETYFGSPMSKGILQVDMWNITPSDR--------------WDWSSLREMISKNGVR 613
+ G Y ++ GS +GIL +D + R +DW SLR I +G+R
Sbjct: 684 ERGAYSSFKGSLWDQGILPIDSIRLVAEARGDRYLQQDTQASGAFDWDSLRTQIKTSGIR 743
Query: 614 NSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHA 673
NS +A PTA+ + I G ++ EP N+Y + LSGEF VVN++L+ DL L LW
Sbjct: 744 NSNTMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSGEFTVVNEYLVNDLKALDLWDEV 803
Query: 674 LKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQ 733
+ + Y +GSV KI +PEELKAIYK +EI K LVD + R +IDQ+QSLN++M Q
Sbjct: 804 MAHDLKYYDGSVQKIDRVPEELKAIYKCAFEIDPKRLVDAGSRRQKWIDQAQSLNLYMAQ 863
Query: 734 PDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
P KL L+ +AW G+KT YYLRT A K T+ + LN
Sbjct: 864 PSGKKLDELYKHAWLSGLKT-TYYLRTMGATHTEKTTITDTRLN 906
>gi|254282207|ref|ZP_04957175.1| ribonucleoside-diphosphate reductase, alpha subunit, putative
[gamma proteobacterium NOR51-B]
gi|219678410|gb|EED34759.1| ribonucleoside-diphosphate reductase, alpha subunit, putative
[gamma proteobacterium NOR51-B]
Length = 961
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 311/836 (37%), Positives = 459/836 (54%), Gaps = 61/836 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V++ DG + P+ +++ + + GL+ + + +Y GV ++
Sbjct: 156 VVQADGSRSPLDIERVRTIVAEACEGLAD--VSEAAIIDEALRNLYDGVAAEEVSTALVI 213
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHK--ITKNSFSE--TIKDMYNYYNK------RSGKK 112
TA + P+Y+ A R+ + NL ++ +E T +DM +Y + G +
Sbjct: 214 TARTLIEQEPNYSYAAARLLLDNLRAEGLSFMGVAELATQQDMTIHYPAALKAFIKRGIE 273
Query: 113 ASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLM 172
L+A D+ + ++ L A++ +RD F Y G +TL Y + D+ E PQ M
Sbjct: 274 LELLAPDLQDFDLEE---LGSALLPERDLQFSYLGLQTLYDRYFIHSDNTRFELPQIFFM 330
Query: 173 RVSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
RV++G+ + A++ Y L+S + +TPTLFNAGT +PQLSSC+L + DD +
Sbjct: 331 RVAMGLAAREEAKNARAIEFYRLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LF 389
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
GIY ++ A++SK AGG+G +RA G+YI GTNG S GIVP L+V NDTA V+QG
Sbjct: 390 GIYGAIQDNAMLSKFAGGLGNDWTPVRALGAYIKGTNGKSQGIVPFLKVVNDTAVAVNQG 449
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV DDG W+
Sbjct: 450 G-KRKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGDWT 508
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEE---EGRAKM--VISARKLWFEILNSQIETGTPY 404
LF P+D L D +G FE Y QYE G K+ + A+ LW ++L ETG P+
Sbjct: 509 LFSPNDVPDLHDLYGKAFEERYQQYEAMAASGELKLHKTLKAQSLWRKMLGMIFETGHPW 568
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
M FKD CN +S QQ+ G + SSNLCTEI +S +E AVCNL S+ LP+++
Sbjct: 569 MTFKDPCNLRSPQQHCGVVHSSNLCTEITLNTSADEIAVCNLGSVNLPQHI--------- 619
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
+N + + ++L + L+ +ID+N+Y + +SN RHRPIG+G+
Sbjct: 620 -----------ENGVLNLDKLRSTIRTAIRMLDNVIDINYYSVPQAEQSNFRHRPIGMGV 668
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L + + S +A E I Y+A++AS+ELA + G Y +Y GS S+GI
Sbjct: 669 MGFQDALYKLDVAYGSDQAVSFADQSMEAISYYAIEASSELAEERGSYSSYEGSLWSQGI 728
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
D ++ R DW+ L+ ++ NG+RNS ++A PTA+ + I G
Sbjct: 729 FPHDSLDLLIQHRGEDYIQVNRDQSMDWAPLKAKVAANGMRNSNVMAIAPTATIANITGV 788
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF VVN +L+KDL GLW + + Y +GSV I IP
Sbjct: 789 SQSIEPTYQNLYVKSNLSGEFTVVNPYLVKDLKARGLWDKVMVNDLKYYDGSVQAIDRIP 848
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
++LKA Y T +E++ + LVD A+ R +IDQ+QSLN+++ KL + AW G+K
Sbjct: 849 DDLKAKYATAFEVEPRWLVDSASRRQKWIDQAQSLNLYINNASGKKLDVTYRMAWFNGLK 908
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
T YYLR+ AA K TV++ LN + A A + Q CSL + +C AC
Sbjct: 909 T-TYYLRSLAATGTEKSTVESGKLNAVSSGSA-TPQPAPVPQ-ACSL-DDPDCEAC 960
>gi|387895169|ref|YP_006325466.1| ribonucleoside-diphosphate reductase subunit alpha [Pseudomonas
fluorescens A506]
gi|423693122|ref|ZP_17667642.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
fluorescens SS101]
gi|387163405|gb|AFJ58604.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
fluorescens A506]
gi|388002702|gb|EIK64031.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
fluorescens SS101]
Length = 964
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 314/838 (37%), Positives = 452/838 (53%), Gaps = 65/838 (7%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG P+ ++ + + GL E D L+ ++ +Y GV T ++ TA
Sbjct: 155 DGSFAPLDLGRLNTIITEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVMTART 212
Query: 67 MTVNHPDYALLAGRVAVSNLHK----ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
+ P+Y+ + R+ + L K + S T +M + Y K A + +E
Sbjct: 213 LVEREPNYSFVTARLLMDTLRAEGLGFLKVADSATHHEMADLYAK--ALPAYIAKGIEFE 270
Query: 123 IIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
++ A D AI ++RD F Y G +TL Y + D E PQ MRV++G
Sbjct: 271 LLNPILATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFFMRVAMG 330
Query: 178 I---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ K+ D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + GIY
Sbjct: 331 LAIEEKNKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSGIYHA 389
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 390 IHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 448
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+LF PS
Sbjct: 449 GAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTLFSPS 508
Query: 355 DASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPYMLFK 408
+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P++ FK
Sbjct: 509 EVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPWLTFK 568
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 569 DPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI------------- 615
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
N D +LA L+ +ID+N+Y + + SN +HRP+G+GI G
Sbjct: 616 -------VNGKLDTVKLARTVNTAVRMLDNVIDINYYSVPQAQNSNFKHRPVGLGIMGFQ 668
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGIL +D
Sbjct: 669 DALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGILPLD 728
Query: 589 MWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
I R DW+ +R + K G+RNS ++A PTA+ + I G ++
Sbjct: 729 SQQILIEARGQKYIDVDLNETLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGVSQSI 787
Query: 637 EPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELK 696
EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP+ELK
Sbjct: 788 EPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELK 847
Query: 697 AIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMY 756
+Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+KT Y
Sbjct: 848 ELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKT-TY 906
Query: 757 YLRTRAAADAIKFTVDTSVLNN-EKANRADNDV-----EANLAQVVCSLKNQEECMAC 808
YLR AA K T++T LN N D+ V C++ ++ +C AC
Sbjct: 907 YLRALAATSTEKSTINTGKLNAVSSGNHGDDSVLAAPAGPAPVPKACAI-DEPDCEAC 963
>gi|387816188|ref|YP_005431683.1| ribonucleoside diphosphate reductase subunit alpha [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381341213|emb|CCG97260.1| ribonucleoside diphosphate reductase, alpha subunit [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 952
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 320/837 (38%), Positives = 457/837 (54%), Gaps = 77/837 (9%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+ V K DG P+ + ++++ + GL D ++ + +Y G+ T++
Sbjct: 163 LTVKKTDGSIAPLDLGLMKQQVEQAATGLDGIDGDSLV--EDALRNLYDGIEETEVLSAL 220
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKNSF----SETIKDMYNYYNKRSGKKASLV 116
TA PDY+ + R+ + L T + S + ++Y A +
Sbjct: 221 IMTARGRIEREPDYSAVTARLLLEQLRLETAEALDLPRSLPLAEIYP-----QALSAFVH 275
Query: 117 ADDVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHML 171
A YE++ + A D A+ RD F + G +TL Y L + +E PQ
Sbjct: 276 AGIRYELLDEALAAFDLERLGNALKPQRDLQFGFLGLQTLYDRYFLHWNKARLELPQVFF 335
Query: 172 MRVSVGI--HKDDTDS-ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSI 228
MRV++G+ +DD ++ A++ Y L+S + +TPTLFN+GT QLSSC+L + DD +
Sbjct: 336 MRVAMGLALREDDPNARAIEFYELLSSFDYMASTPTLFNSGTRHSQLSSCYLTTVGDD-L 394
Query: 229 EGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQ 288
EGIY ++ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+Q
Sbjct: 395 EGIYGAIRDNALLSKWAGGLGNDWTPVRALGSHIKGTNGQSQGVVPFLKVVNDTAVAVNQ 454
Query: 289 GGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKW 348
GG KRKGA YLE WH DI EFL+LRKN G E R D+ A WVPDL +ER+R+D W
Sbjct: 455 GG-KRKGAVCAYLESWHLDIEEFLELRKNTGDERRRTHDMNTANWVPDLLIERMREDRDW 513
Query: 349 SLFCPSDASGLADSWGIEFEHLYSQYE---EEGRAKMV--ISARKLWFEILNSQIETGTP 403
+LF PSD L D +G F Y YE E+G+ K+ I A++LW ++L ETG P
Sbjct: 514 TLFSPSDVPDLHDLYGNAFRERYQHYEALAEQGKIKLFKKIPAKQLWRKMLTVLFETGHP 573
Query: 404 YMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQ 463
++ FKD CN +S QQ+ G + SSNLCTEI +S +E AVCNL S+ L ++
Sbjct: 574 WITFKDPCNLRSPQQHQGVVHSSNLCTEITLNTSADEIAVCNLGSVNLAAHI-------- 625
Query: 464 SNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIG 523
K+ D RL L+ +ID+N Y + R SNL+HRP+G+G
Sbjct: 626 ------------KDGELDVTRLERTVNTAVRMLDNVIDINFYAVPQARNSNLKHRPVGLG 673
Query: 524 IQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKG 583
+ G D LGLP+ SPEA + E + Y AL+ASA LA + G Y+TY GS S+G
Sbjct: 674 LMGFQDALYQLGLPYSSPEAVEFADVAMEQLSYFALRASATLAGERGAYDTYEGSLWSQG 733
Query: 584 ILQVDM------------WNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILG 631
IL +D ++ R DW+ +RE+I+KNG+RNS ++A PTA+ S I+G
Sbjct: 734 ILPMDSVGLLKDNRRDGDLSLNTHSRLDWTPVRELIAKNGMRNSNVMAIAPTATISNIVG 793
Query: 632 NNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEI 691
++ EP N++ + LSGEF VVN L++DL GLW + + + Y +GSV +I I
Sbjct: 794 VSQSIEPAYQNLFVKSNLSGEFTVVNPSLVRDLKAEGLWDNVMVNDLKYFDGSVQQIDRI 853
Query: 692 PEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGM 751
P ELKA Y T +EI + LV+ AA R ++DQ+QSLN++M +P KL +L+ AW +G+
Sbjct: 854 PAELKARYATAFEIDPRWLVEAAARRQKWLDQAQSLNLYMAEPSGKKLDALYQLAWERGL 913
Query: 752 KTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
KT YYLR+ A A K V A Q VCS+ N +C AC
Sbjct: 914 KT-TYYLRSLGATGAEKTA----------------PVSAPQPQ-VCSIDN-PDCEAC 951
>gi|254516738|ref|ZP_05128797.1| putative ribonucleoside-diphosphate reductase alpha subunit [gamma
proteobacterium NOR5-3]
gi|219675161|gb|EED31528.1| putative ribonucleoside-diphosphate reductase alpha subunit [gamma
proteobacterium NOR5-3]
Length = 967
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 311/838 (37%), Positives = 449/838 (53%), Gaps = 66/838 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V++ DG K P+ +++ + + GL E + + +Y GV+ +L
Sbjct: 163 VVQLDGSKAPLDLERLHIIVSEACAGL--EDVSESRILDEALRNLYDGVSMQELSTSLVI 220
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHK----ITKNSFSETIKDMYNYYNK------RSGKK 112
TA + P+Y + R+ NL + S T DM YY + + G +
Sbjct: 221 TARTLIEQEPNYTYASARLLCDNLRTEALTFLGVAESATQGDMDRYYPQALSAYIKRGVE 280
Query: 113 ASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLM 172
L+ + + ++ L AI+ +RD F Y G +TL Y + D +E PQ M
Sbjct: 281 LELLDPTLADYDLEQ---LGAAILPERDLQFTYLGLQTLYDRYFIHSDEVRIELPQIFFM 337
Query: 173 RVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
RV++G+ ++ A++ Y L+S + +TPTLFNAGT +PQLSSC+L + DD +
Sbjct: 338 RVAMGLAVEEEHREARAIEFYRLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LH 396
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
GIY ++ A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QG
Sbjct: 397 GIYGAIQDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQG 456
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDG W+
Sbjct: 457 G-KRKGAVCSYLETWHMDIEEFVELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGDWT 515
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYEE-----EGRAKMVISARKLWFEILNSQIETGTPY 404
LF P+D L D +G FE Y+ YE E + + A+ LW ++L ETG P+
Sbjct: 516 LFSPNDVPDLHDLYGKAFEERYNTYEAMAANGEIKNHKTVKAQNLWRKMLGMLFETGHPW 575
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
M FKD CN +S QQ+ G + SSNLCTEI +S +E AVCNL SI LP+++ E G
Sbjct: 576 MTFKDPCNLRSPQQHAGVVHSSNLCTEITLNTSADEIAVCNLGSINLPQHIDENG----- 630
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
+ E+L + + L+ +ID+N+Y ++T R SN RHRP+G+G+
Sbjct: 631 ---------------LNLEKLEQTVRTAVRMLDNVIDINYYSVDTARNSNFRHRPVGLGL 675
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D + + S A + E I Y+A+ AS+ LA + G Y +Y GS S+GI
Sbjct: 676 MGFQDALYKQHIAYGSDAAVEFADRSMEAISYYAIDASSSLAAERGAYSSYEGSLWSQGI 735
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D + +R DW SLR + G+RNS ++A PTA+ + I G
Sbjct: 736 LPIDSLSKLVDERGSDYIKVDSTTTLDWESLRTSVKARGMRNSNVMAIAPTATIANITGV 795
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF VVN +L+ DL GLW + + Y +GSV I IP
Sbjct: 796 SQSIEPTYQNLYVKSNLSGEFTVVNPYLVNDLKARGLWDSVMVNDLKYYDGSVQSIERIP 855
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+L+AIY +E++ K +V+ A+ R +IDQ+QSLN+++ KL + AW G+K
Sbjct: 856 ADLRAIYSNAFEVEPKWIVECASRRQKWIDQAQSLNLYINNASGKKLDITYRMAWYSGLK 915
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQV--VCSLKNQEECMAC 808
T YYLR+ AA K T+ T L N + E A V CSL + +C AC
Sbjct: 916 T-TYYLRSLAATGTEKSTIATGQL-----NAVSSSAEPQPAPVPQACSL-DDPDCEAC 966
>gi|91787005|ref|YP_547957.1| ribonucleotide-diphosphate reductase subunit alpha [Polaromonas sp.
JS666]
gi|91696230|gb|ABE43059.1| Ribonucleoside-diphosphate reductase [Polaromonas sp. JS666]
Length = 969
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 296/771 (38%), Positives = 437/771 (56%), Gaps = 58/771 (7%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSF 94
DP++ + +Y GV ++ + + A + PDY R+ +H I +
Sbjct: 182 DPIVA--ETMRNLYDGVPIDEVYKASILAARTLIEKDPDYTYATARLL---MHTIRREVL 236
Query: 95 SETI--KDMYNYYNK------RSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYF 146
E + ++M++ Y + G + L+ + + + + A L A+ +RD FDY
Sbjct: 237 GEEVSQEEMHSRYAEYFPKFIAKGVQNELLDEKLQQF---DLARLGAALKPERDLKFDYL 293
Query: 147 GFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTD---SALKTYHLMSQHWFTHATP 203
G +TL Y L + + +E PQ MRV++G+ + D A++ Y ++S F +TP
Sbjct: 294 GLQTLFDRYFLHVRKQRIELPQAFFMRVAMGLSLGEIDREARAIEFYEILSSFDFMSSTP 353
Query: 204 TLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIH 263
TLFNAGT + QLSSC+L + DD + GIYD +K+ A++SK AGG+G +RA G++I
Sbjct: 354 TLFNAGTLRSQLSSCYLTTVADD-LGGIYDAIKENALLSKFAGGLGNDWTPVRALGAHIK 412
Query: 264 GTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEEC 323
GTNG S G+VP L+V NDTA V+Q GGKRKGA YLE WH DI EFL+LRKN G +
Sbjct: 413 GTNGESQGVVPFLKVVNDTAVAVNQ-GGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRR 471
Query: 324 RARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV 383
R D+ A W+PDLFM RV + G W+LF PSD L D +G EFE +Y+ YE +
Sbjct: 472 RTHDMNTANWIPDLFMRRVMEKGTWTLFSPSDTPDLHDKFGKEFEKIYTAYEARAERGEI 531
Query: 384 ISARKL-----WFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSP 438
ARKL W ++L+ ETG P++ FKD+CN +S QQ+ G + SSNLCTEI +S
Sbjct: 532 KPARKLQATDMWRKMLSMLFETGHPWITFKDACNVRSPQQHAGVVHSSNLCTEITLNTSD 591
Query: 439 EETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNK 498
ETAVCNL S+ L +++++ + D ++L + L+
Sbjct: 592 TETAVCNLGSVNLVQHLKDGAI--------------------DHDKLKKTITTAMRMLDN 631
Query: 499 IIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHA 558
+ID+N+Y ++ R SN+RHRP+G+GI G D L +P+ S EA + E + YHA
Sbjct: 632 VIDINYYAVKKARDSNMRHRPVGLGIMGFQDCLYELRVPYASQEAVEFADKSMEAVCYHA 691
Query: 559 LKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMI 607
AS ELA + G Y +Y GS KGIL +D ++ +R DW +LR+ I
Sbjct: 692 YWASTELAKERGKYASYKGSLWDKGILPLDTLDMLAEERGGYVEVDRSATLDWDALRQKI 751
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTEL 667
+++G+RNS VA PTA+ S I+G + C EP N+ + LSGEF V+N +L++DL L
Sbjct: 752 AQDGMRNSNCVAIAPTATISNIIGVDACIEPCFGNLSVKSNLSGEFTVINHYLVRDLKRL 811
Query: 668 GLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSL 727
GLW + + + +GS+ + +P+E+KA+Y T +E++ +V+ AA R +IDQ+QSL
Sbjct: 812 GLWDDVMVVDLKHFDGSLRPVDRVPQEIKALYATAFEVETSWIVEAAARRQKWIDQAQSL 871
Query: 728 NIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNN 778
NI+M KL + AW +G+KT YYLRT A A K TV +N+
Sbjct: 872 NIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMGATHAEKSTVKAGKMNS 921
>gi|398904201|ref|ZP_10652125.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM50]
gi|398176143|gb|EJM63873.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM50]
Length = 964
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 312/843 (37%), Positives = 454/843 (53%), Gaps = 66/843 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+ + DG P+ ++ + + GL++ D L+ ++ +Y GV T ++
Sbjct: 150 ITRADGSLAPLDMGRLNTIVTEACEGLAEVDGD--LIQRETLKNLYDGVALTDVNTALVM 207
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSF----SETIKDMYNYYNKRSGKKASLVAD 118
TA + P+Y+ + R+ + L N S T +M + Y K A +
Sbjct: 208 TARTLVEREPNYSFVTARLLMDTLRAEGLNFLGVAESATHHEMVDLYAK--ALPAYIAKG 265
Query: 119 DVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMR 173
+E++ A D AI ++RD F Y G +TL Y + D E PQ MR
Sbjct: 266 IEFELLNPVLASFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQIFFMR 325
Query: 174 VSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
V++G+ K+ D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + G
Sbjct: 326 VAMGLAIEEKNKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSG 384
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY + A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 385 IYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 444
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+L
Sbjct: 445 -KRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTL 503
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPY 404
F PS+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P+
Sbjct: 504 FSPSEVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPW 563
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 564 LTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI--------- 614
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
N D +L L+ +ID+N+Y + + SN +HRP+G+GI
Sbjct: 615 -----------TNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGI 663
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGI
Sbjct: 664 MGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGI 723
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D I R DW+ +R + K G+RNS ++A PTA+ + I G
Sbjct: 724 LPLDSQQILIEQRGQKYIDVDLNESLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGV 782
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP
Sbjct: 783 SQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIP 842
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ELK +Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+K
Sbjct: 843 QELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLK 902
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEEC 805
T YYLR AA K T++T LN + N D+ V C++ ++ +C
Sbjct: 903 T-TYYLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAI-DEPDC 960
Query: 806 MAC 808
AC
Sbjct: 961 EAC 963
>gi|407975878|ref|ZP_11156781.1| ribonucleotide-diphosphate reductase subunit alpha [Nitratireductor
indicus C115]
gi|407428739|gb|EKF41420.1| ribonucleotide-diphosphate reductase subunit alpha [Nitratireductor
indicus C115]
Length = 965
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 303/795 (38%), Positives = 438/795 (55%), Gaps = 59/795 (7%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG P+ D++ A +++ GL +P+L + +Y G++ +L +
Sbjct: 158 DGAMVPLDADRLRAVVEEACSGLEGVSAEPILA--ETTRNLYDGISQDELALAPILASRT 215
Query: 67 MTVNHPDYALLAGRVAVSNL------------HKITKNSFSETIKDMYNYYNKRSGKKAS 114
+ P YA ++ R+ + L + T+ + D + Y K +G +A
Sbjct: 216 LIETEPGYAKVSARLLLDKLRSEALTFVKGSAQQATQAEMAALYADYFRAYLK-AGIEAE 274
Query: 115 LVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRV 174
L+ ++ ++ + A++ +RD FDY G +TL Y L + E PQ MRV
Sbjct: 275 LIDPELGRFDIER---IVAALMPERDLQFDYLGLQTLYDRYFLHRHNVRFELPQAFFMRV 331
Query: 175 SVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGI 231
++G+ + D A++ Y L+S F +TPTLFN+GT +PQLSSCFL + DD ++GI
Sbjct: 332 AMGLAIREIDREGRAIEFYRLLSSFDFMTSTPTLFNSGTLRPQLSSCFLTTVSDD-LDGI 390
Query: 232 YDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGG 291
+ +K A+++K +GG+G +R G++I GTNG S G+VP L+V NDTA V+QGG
Sbjct: 391 FKAVKDNALLAKYSGGLGNDWSRVRGLGAHIKGTNGQSQGVVPFLKVANDTAIAVNQGG- 449
Query: 292 KRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLF 351
KRKGA YLE WH DI EFLDLRKN G + R D+ A WVPDLFMERV DG W+LF
Sbjct: 450 KRKGAVCAYLETWHIDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMERVEADGTWTLF 509
Query: 352 CPSDASGLADSWGIEFEHLYSQYE---EEGRAKMV--ISARKLWFEILNSQIETGTPYML 406
P +A L D +GI F Y YE E G K+ + A LW +L ETG P++
Sbjct: 510 SPDEAPDLHDLYGIPFREAYEAYEAKAERGEMKVYKQLRAVDLWRRMLTMLFETGHPWIT 569
Query: 407 FKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNV 466
FKD CN +S Q ++G + SSNLCTEI +S +E AVCNL S+ L +V G+
Sbjct: 570 FKDPCNIRSPQGHVGVVHSSNLCTEITLNTSADEVAVCNLGSVNLAAHVSADGL------ 623
Query: 467 SKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQG 526
D ERLA K L+ ++D+N Y I RRSNLRHRP+G+G+ G
Sbjct: 624 --------------DHERLARTVKTAMRMLDNVVDINFYTIPEARRSNLRHRPVGLGLMG 669
Query: 527 LADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQ 586
D +P+ S EA + E + YHA+ AS ELA + G Y+T+ GS S+G+L
Sbjct: 670 FQDALQTRRIPYASQEAVAFADESMEALSYHAISASVELAAERGRYQTFEGSLWSQGVLP 729
Query: 587 VD----MWNITPS------DRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
VD + PS + DW SLRE + G+RNS +A PTA+ S I G ++
Sbjct: 730 VDSIARLSEARPSVTMDNAETLDWESLRERVRSTGMRNSNCMAIAPTATISNICGVSQSI 789
Query: 637 EPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELK 696
EP N++ + +SG+F VVN L++DL GLW + + Y +GSV +I IP++LK
Sbjct: 790 EPSYQNLFVKSNMSGDFTVVNAALVRDLKARGLWDEVMVADLKYYDGSVGQIDRIPDDLK 849
Query: 697 AIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMY 756
A+Y T +EI+ L++ A+ R +IDQ+QSLN+++ P KL + AW G+KT Y
Sbjct: 850 ALYATAFEIEPIWLIEAASRRQKWIDQAQSLNLYVSNPSGRKLDETYRLAWKFGLKT-TY 908
Query: 757 YLRTRAAADAIKFTV 771
YLR+R+A K T+
Sbjct: 909 YLRSRSATHVEKSTL 923
>gi|300703001|ref|YP_003744603.1| ribonucleoside-diphosphate reductase subunit alpha [Ralstonia
solanacearum CFBP2957]
gi|299070664|emb|CBJ41959.1| Ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
solanacearum CFBP2957]
Length = 987
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 302/769 (39%), Positives = 436/769 (56%), Gaps = 49/769 (6%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------ 88
DP + ++ +Y+GV +Q+ + A A + P Y+ R+ + + +
Sbjct: 183 DPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREILGEE 242
Query: 89 ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEI-IMKNAACLDGAIIYDRDFDFDYFG 147
+T+ + D + + KR G A L+ D + + + K A LD + RD F+Y G
Sbjct: 243 VTQAEMAARYVDYFPQFIKR-GINAGLLDDTLAQFDLAKLGAALDAS----RDLQFNYLG 297
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPT 204
+TL Y L + + +E PQ MRV++G+ ++ D A++ Y L+S F +TPT
Sbjct: 298 LQTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAIEFYQLLSSFDFMSSTPT 357
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G N+RA GS+I G
Sbjct: 358 LFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 416
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 417 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 475
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GRAK 381
D+ A W+PDLFM+RV ++G+W+LF PS L D G FE Y YEE+ G K
Sbjct: 476 THDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGRAFEQAYLGYEEKVARGEIK 535
Query: 382 MV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPE 439
+ + A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI ++
Sbjct: 536 LFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDS 595
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
E AVCNL S+ L V+ LV D L D ++L + + L+ +
Sbjct: 596 EIAVCNLGSVNL--------------VAHLVQQADGSYAL-DHDKLKKTVRTAMRMLDNV 640
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
ID+N+Y ++ R SNLRHRP+G+G+ G D +L +P+ + A Q E + Y+A
Sbjct: 641 IDINYYAVKKARDSNLRHRPVGLGVMGFQDALHVLRIPYANDAAVQFADTSMEAVCYYAY 700
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMIS 608
AS ELA + G Y TY GS +GIL D + +R DW SLR I
Sbjct: 701 WASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLETDLSSTMDWDSLRGRIQ 760
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
+ G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL G
Sbjct: 761 QYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKARG 820
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LW + + Y +GS+++I IP++L+ +Y T +E++ + LV+ A+ R +IDQ+QSLN
Sbjct: 821 LWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQSLN 880
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
I+M L + AW +G+KT YYLRT A K TV LN
Sbjct: 881 IYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTLN 928
>gi|332526549|ref|ZP_08402661.1| ribonucleotide-diphosphate reductase subunit alpha [Rubrivivax
benzoatilyticus JA2]
gi|332110817|gb|EGJ10994.1| ribonucleotide-diphosphate reductase subunit alpha [Rubrivivax
benzoatilyticus JA2]
Length = 950
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 302/795 (37%), Positives = 446/795 (56%), Gaps = 53/795 (6%)
Query: 8 GRKEPVRFDKITARLKKLSYGLSKE-HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
G++ P+ D + + +++ GL ++ +P+L + +Y GV ++ + A +
Sbjct: 150 GQRLPLDLDALRSLVEQACAGLGEDVRAEPILAETR--RNLYDGVPLDEVYKAAILASRT 207
Query: 67 MTVNHPDYALLAGRVAVSNLHK--ITKNSFSETIKDMYNYYNK---RSGKKASLVADDVY 121
+ P Y R+ + + + + + E + Y Y R G +A L+ +++
Sbjct: 208 LIEKDPAYTRATARLLLHTIRREILGADVRPEAMAARYAEYFPAYVRQGVQAELLDEELQ 267
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
+ A L A+ +RD FDY G +TL Y L +D R +E PQ MRV++G+ +
Sbjct: 268 RF---DLARLGAALKPERDLQFDYLGLQTLYDRYFLHVDGRRIELPQAFFMRVAMGLALN 324
Query: 182 DTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
+ D A++ Y ++S F +TPTLFN+GT + QLSSC+L + DD +EGIY+ LK+
Sbjct: 325 EIDREARAIEFYDVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKEN 383
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 384 ALLSKFAGGLGNDWTPVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVC 442
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + G W+LF PS
Sbjct: 443 AYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWTLFSPSSCPD 502
Query: 359 LADSWGIEFEHLYSQYEE-----EGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNR 413
L D +G FE Y YE E R + AR LW ++L ETG P++ FKD+CN
Sbjct: 503 LHDKFGAAFEQAYVAYERKADRGEIRPFKRLPARDLWRKMLTMLFETGHPWITFKDACNL 562
Query: 414 KSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSR 473
+S QQ++G + SSNLCTEI +S E AVCNL SI L ++V G+
Sbjct: 563 RSPQQHVGVVHSSNLCTEITLNTSAGEIAVCNLGSINLAQHVAGGGI------------- 609
Query: 474 DSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFIL 533
D +L L+ +ID+N+Y ++ R +NLRHRP+G+G+ G D
Sbjct: 610 -------DQAKLKRTVSTAMRMLDNVIDINYYAVKKARDANLRHRPVGLGLMGFQDCLYQ 662
Query: 534 LGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNIT 593
L LP+ S A + E + YHA AS+ELA + G Y +Y GS +G+L D ++
Sbjct: 663 LRLPYASDAAVEFADRSMEALCYHAYWASSELAEERGRYSSYRGSLWDRGVLPQDTLDLL 722
Query: 594 PSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
++R DW++LR I+ +G+RNS VA PTA+ S I+G + EP N
Sbjct: 723 AAERGGHVEVDRSETLDWAALRARIAVHGMRNSNCVAIAPTATISNIIGVDASIEPCFGN 782
Query: 643 IYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTV 702
+ + LSGEF VVN++L++DL LGLW + + + +GS+ + +P+ELK +Y T
Sbjct: 783 LSVKSNLSGEFTVVNEYLVRDLKRLGLWDDVMVMDLKHFDGSLRAVDRVPDELKQLYATA 842
Query: 703 WEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRA 762
+E+ + LV+ AA R +IDQ+QSLNI+M KL ++ AW++G+KT YYLRT +
Sbjct: 843 FEVDARWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDEIYKLAWTRGLKT-TYYLRTMS 901
Query: 763 AADAIKFTVDTSVLN 777
A A K TV +N
Sbjct: 902 ATHAEKSTVAPGAMN 916
>gi|381153010|ref|ZP_09864879.1| ribonucleoside-diphosphate reductase, alpha subunit
[Methylomicrobium album BG8]
gi|380884982|gb|EIC30859.1| ribonucleoside-diphosphate reductase, alpha subunit
[Methylomicrobium album BG8]
Length = 935
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 310/807 (38%), Positives = 448/807 (55%), Gaps = 50/807 (6%)
Query: 8 GRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAM 67
G + P+ A ++ GLS D V + +Y G+ + + A +
Sbjct: 153 GHRRPLDSSAFIALCREACTGLSD--VDAERVWAQTLPNLYDGMPLAAVRQALVLAARTL 210
Query: 68 TVNHPDYALLAGRVAVSNLHK------ITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
PDYA +A R+ +SNL + +T+ +E D + + +G A L+ +
Sbjct: 211 IEAEPDYAKVAARLLLSNLRQEATGQPLTQADMAERYADCFAEFLA-AGVAAELLDKRLL 269
Query: 122 EIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKD 181
E + L A+ +RD FDY G +TL Y L ++ R +E PQ MRV++G+ +
Sbjct: 270 EFDLPR---LGRALQAERDLQFDYLGLQTLYDRYFLNVEGRRIELPQCFFMRVAMGLALN 326
Query: 182 DTD---SALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKC 238
+ D A++ Y ++S F +TPTLFN+GT PQLSSC+L + DD ++GIY ++K+
Sbjct: 327 EIDRETKAIEFYQVLSSFDFMCSTPTLFNSGTRHPQLSSCYLTTVSDD-LDGIYQSIKEN 385
Query: 239 AIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFA 298
A++ K AGG+G +RA GS I GTNG S G++P L+V NDTA V+QGG KRKGA
Sbjct: 386 ALLQKYAGGLGNDWTPVRALGSRIKGTNGHSQGVIPFLKVVNDTAVAVNQGG-KRKGAVC 444
Query: 299 IYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASG 358
YLE WH D EFL+LRKN G E RA D+ A WV DLFM+RVR +G W+LF P D
Sbjct: 445 AYLENWHLDFEEFLELRKNTGDERRRAHDMNTAAWVSDLFMQRVRSNGDWTLFSPVDVPD 504
Query: 359 LADSWGIEFEHLYSQYE---EEGRAKMV--ISARKLWFEILNSQIETGTPYMLFKDSCNR 413
L D +G F Y YE E G K+ + A +LW ++L ETG P++ FKD+CN
Sbjct: 505 LHDLYGGAFAEAYQAYEAKAERGEIKLYKRVGAVQLWRKMLTMLFETGHPWITFKDACNL 564
Query: 414 KSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSR 473
+S QQ+ G I SSNLCTEI +S +ETAVCNL S+ LP ++ E+ Q + KL +
Sbjct: 565 RSPQQHAGVIHSSNLCTEITLNTSADETAVCNLGSVNLPAHLVERDGVWQLDADKLQRTI 624
Query: 474 DSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFIL 533
+ R+ D +ID+N Y R +NLRHRP+G+G+ G +D
Sbjct: 625 ATAMRMLD----------------NVIDINFYATVKARNANLRHRPVGLGMMGFSDCLHK 668
Query: 534 LGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW--- 590
LG+ + SPEA + E + Y+A +ASA+LA + G Y ++ GS +G+L D
Sbjct: 669 LGVSYASPEALEFADRSAEMLCYYAYRASADLAEQRGRYSSFVGSLWQQGVLPPDTLARL 728
Query: 591 -------NITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNI 643
+ S + DW +LRE I++ G+RNS VA PTA+ + I+G + EP N+
Sbjct: 729 IETRGDLGVAASGQLDWHALRERIAQVGMRNSNCVAIAPTATIANIVGVSASIEPVYQNL 788
Query: 644 YTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVW 703
Y + LSGEF VVN L+++L L LW + + Y +GS++ I +PE +KA Y T +
Sbjct: 789 YVKSNLSGEFTVVNAALVRELKALDLWDAVMVADLKYFDGSLAAIERVPETIKARYATAF 848
Query: 704 EIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAA 763
EI+ + L++ AA R +IDQSQSLN+++ P KL L+ AW +G+KT YYLRT A
Sbjct: 849 EIEPEWLIEAAARRQKWIDQSQSLNLYVAAPTGSKLDRLYRLAWQRGLKT-TYYLRTLGA 907
Query: 764 ADAIKFTVDTSVLNNEKANRADNDVEA 790
A++ T D + + D D EA
Sbjct: 908 T-AMEKTGDGGEPAAKVCSITDPDCEA 933
>gi|395651267|ref|ZP_10439117.1| ribonucleotide-diphosphate reductase subunit alpha [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 963
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 314/838 (37%), Positives = 451/838 (53%), Gaps = 65/838 (7%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG P+ ++ + + GL E D L+ ++ +Y GV T ++ TA
Sbjct: 154 DGTFAPLDLGRLNTIITEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVMTART 211
Query: 67 MTVNHPDYALLAGRVAVSNLHK----ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
+ P+Y+ + R+ + L + S T +M + Y K A + YE
Sbjct: 212 LVEREPNYSFVTARLLMDTLRAEGLGFLGVADSATHHEMADLYAK--ALPAYIAKGIEYE 269
Query: 123 IIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
++ A D AI ++RD F Y G +TL Y + D E PQ MRV++G
Sbjct: 270 LLNPVLATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFFMRVAMG 329
Query: 178 I---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ K D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + GIY
Sbjct: 330 LAIEEKHKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSGIYHA 388
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 389 IHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 447
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+LF PS
Sbjct: 448 GAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTLFSPS 507
Query: 355 DASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPYMLFK 408
+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P++ FK
Sbjct: 508 EVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPWLTFK 567
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 568 DPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI------------- 614
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
N D +LA L+ +ID+N+Y + + SN +HRP+G+GI G
Sbjct: 615 -------VNGKLDTVKLARTVNTAVRMLDNVIDINYYSVPQAQNSNFKHRPVGLGIMGFQ 667
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGIL +D
Sbjct: 668 DALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGILPLD 727
Query: 589 MWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
I + R DW+ +R + K G+RNS ++A PTA+ + I G ++
Sbjct: 728 SQQILIAQRGQKYIDVDLNESLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGVSQSI 786
Query: 637 EPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELK 696
EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP+ELK
Sbjct: 787 EPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELK 846
Query: 697 AIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMY 756
+Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+KT Y
Sbjct: 847 ELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKT-TY 905
Query: 757 YLRTRAAADAIKFTVDTSVLNN-EKANRADNDV-----EANLAQVVCSLKNQEECMAC 808
YLR AA K T++T LN N D+ V C++ ++ +C AC
Sbjct: 906 YLRALAATSTEKSTINTGKLNAVSSGNHGDDSVLAAPAGPAPVPKACAI-DEPDCEAC 962
>gi|418292660|ref|ZP_12904591.1| ribonucleotide-diphosphate reductase subunit alpha [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
gi|379064074|gb|EHY76817.1| ribonucleotide-diphosphate reductase subunit alpha [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
Length = 964
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 310/805 (38%), Positives = 450/805 (55%), Gaps = 60/805 (7%)
Query: 4 IKR-DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
IKR DG P+ ++ + + GL E D L+ ++ +Y GV T ++
Sbjct: 144 IKRADGSLAPLDLGRLNTIISEACEGL--EEVDGALIQKETLKNLYDGVEQTDVNTALVM 201
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLH----KITKNSFSETIKDMYNYYNK------RSGKK 112
TA + P+Y+ + R+ + L + + S T +M + Y K G +
Sbjct: 202 TARTLVEREPNYSYVTARLLMDTLRAEALSFLEVAESATHHEMADLYAKALPAYVEKGVQ 261
Query: 113 ASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLM 172
L+ + E + A L AI +++D F Y G +TL Y + D+ E PQ M
Sbjct: 262 FELLDPRLKEY---DLAKLGAAINHEQDQQFTYLGLQTLYDRYFIHKDNVRFELPQIFFM 318
Query: 173 RVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIE 229
RV++G+ ++ + A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD +
Sbjct: 319 RVAMGLAIEEENREARAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDD-LG 377
Query: 230 GIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQG 289
GIYD ++ A++SK AGG+G +RA G+YI GTNG S G+VP L+V NDTA V+QG
Sbjct: 378 GIYDAIRDNALLSKFAGGLGNDWTPVRALGAYIKGTNGKSQGVVPFLKVVNDTAVAVNQG 437
Query: 290 GGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWS 349
G KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV DDGKW+
Sbjct: 438 G-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWT 496
Query: 350 LFCPSDASGLADSWGIEFEHLYSQYE---EEGRAK--MVISARKLWFEILNSQIETGTPY 404
LF PS+ L D G FE Y YE E G+ K + A+ LW ++L+ ETG P+
Sbjct: 497 LFSPSEVPDLHDLTGKAFEERYEYYEALIEYGKIKNYKTLQAKDLWRKMLSMLFETGHPW 556
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LPR++
Sbjct: 557 LTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPRHIV-------- 608
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
D K D +L + L+ +ID+N+Y + + SNL+HRP+G+GI
Sbjct: 609 ---------DGK---LDTAKLERTVRTAVRMLDNVIDINYYSVPQAKNSNLKHRPVGLGI 656
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L +P+ S A + E + Y+A++AS +LA + G YET+ GS S+G+
Sbjct: 657 MGFQDALYLQHIPYGSDAAIEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSQGV 716
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D I R DW+ +R + KNG+RNS ++A PTA+ + I G
Sbjct: 717 LPLDSQQILIEARGQKYIDVDLTESLDWAPVRARV-KNGIRNSNIMAIAPTATIANITGV 775
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP
Sbjct: 776 SQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDAVMINDLKYYDGSVQQIERIP 835
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ELK +Y T +E++ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+K
Sbjct: 836 QELKDLYATAFEVETKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLK 895
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN 777
T YYLR AA K TV T LN
Sbjct: 896 T-TYYLRALAATSTEKSTVSTGKLN 919
>gi|330815477|ref|YP_004359182.1| Ribonucleotide-diphosphate reductase alpha subunit [Burkholderia
gladioli BSR3]
gi|327367870|gb|AEA59226.1| Ribonucleotide-diphosphate reductase alpha subunit [Burkholderia
gladioli BSR3]
Length = 993
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 312/771 (40%), Positives = 437/771 (56%), Gaps = 55/771 (7%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITKNSF 94
DP+ VA+ V +Y GV +Q+ + A A M P Y+ + R+ LH I +
Sbjct: 188 DPI-VAETV-KNLYDGVPLSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 242
Query: 95 SETIK--DMYNYYNK------RSGKKASLVADDVYEI-IMKNAACLDGAIIYDRDFDFDY 145
E + +M Y + + G +A L+ D + + +++ LD + RD F Y
Sbjct: 243 GEEVAQGEMQARYAEYFPQFLKRGVEAELLDDKLLQFDLVRLGEALDAS----RDLQFGY 298
Query: 146 FGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHAT 202
G +TL Y L ++ +E PQ MRV++G+ ++ D A++ Y+++S F +T
Sbjct: 299 LGLQTLYDRYFLHVEGTRIEMPQAFYMRVAMGLALNEIDREARAIEFYNVLSSFDFMSST 358
Query: 203 PTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYI 262
PTLFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I
Sbjct: 359 PTLFNSGTRRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHI 417
Query: 263 HGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEE 322
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 418 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDR 476
Query: 323 CRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---GR 379
R D+ A W+PDLFM+RV + G W+LF PS L D +G EFE Y YEE+ G
Sbjct: 477 RRTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYLGYEEKVARGE 536
Query: 380 AKMV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSS 437
K+ I A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +S
Sbjct: 537 LKLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTS 596
Query: 438 PEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLN 497
E AVCNL S+ L V+ L D L D ++L + L+
Sbjct: 597 DSEIAVCNLGSVNL--------------VAHLAKQADGSYAL-DHDKLKRTVSVAMRMLD 641
Query: 498 KIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYH 557
+ID+N+Y + R SNL+HRP+G+GI G D LL PF S A + E + Y+
Sbjct: 642 NVIDINYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPFSSDTAVEFADRSMEAVCYY 701
Query: 558 ALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITP-----------SDRWDWSSLREM 606
A AS ELA + G Y +Y GS +GIL D + S+ DW+SLR
Sbjct: 702 AYWASTELAEERGRYSSYTGSLWDRGILPQDTLKLLEEARGGYVEVDMSESLDWTSLRGR 761
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTE 666
IS +G+RNS +A PTA+ S I+G + C EP N++ + LSGEF VVN++L++DL E
Sbjct: 762 ISVHGMRNSNCIAIAPTATISNIIGVSPCIEPTFQNLFVKSNLSGEFTVVNEYLVRDLKE 821
Query: 667 LGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQS 726
GLW + + Y +G +S+I IP +L+AIY T +E+ K LV+ A+ R +IDQ+QS
Sbjct: 822 RGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQS 881
Query: 727 LNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
LNI M KL ++ AW +G+KT YYLRT AA K TV LN
Sbjct: 882 LNIFMAGASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGALN 931
>gi|388466455|ref|ZP_10140665.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
synxantha BG33R]
gi|388010035|gb|EIK71222.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
synxantha BG33R]
Length = 964
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 313/838 (37%), Positives = 451/838 (53%), Gaps = 65/838 (7%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG P+ ++ + + GL E D L+ ++ +Y GV T ++ TA
Sbjct: 155 DGSFAPLDLGRLNTIITEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVMTART 212
Query: 67 MTVNHPDYALLAGRVAVSNLHK----ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
+ P+Y+ + R+ + L K + S T +M + Y K A + +E
Sbjct: 213 LVEREPNYSFVTARLLMDTLRAEGLGFLKVADSATHHEMADLYAK--ALPAYIAKGIEFE 270
Query: 123 IIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
++ A D AI ++RD F Y G +TL Y + D E PQ MRV++G
Sbjct: 271 LLNPILATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFFMRVAMG 330
Query: 178 I---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ K+ D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + GIY
Sbjct: 331 LAIEEKNKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSGIYHA 389
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 390 IHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 448
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+LF PS
Sbjct: 449 GAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTLFSPS 508
Query: 355 DASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPYMLFK 408
+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P++ FK
Sbjct: 509 EVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPWLTFK 568
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 569 DPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI------------- 615
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
N D +L L+ +ID+N+Y + + SN +HRP+G+GI G
Sbjct: 616 -------VNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAQNSNFKHRPVGLGIMGFQ 668
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGIL +D
Sbjct: 669 DALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGILPLD 728
Query: 589 MWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
I R DW+ +R + K G+RNS ++A PTA+ + I G ++
Sbjct: 729 SQQILIEARGQKYIDVDLNETLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGVSQSI 787
Query: 637 EPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELK 696
EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP+ELK
Sbjct: 788 EPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELK 847
Query: 697 AIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMY 756
+Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+KT Y
Sbjct: 848 ELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKT-TY 906
Query: 757 YLRTRAAADAIKFTVDTSVLNN-EKANRADNDV-----EANLAQVVCSLKNQEECMAC 808
YLR AA K T++T LN N D+ V C++ ++ +C AC
Sbjct: 907 YLRALAATSTEKSTINTGKLNAVSSGNHGDDSVLAAPAGPAPVPKACAI-DEPDCEAC 963
>gi|456062541|ref|YP_007501511.1| ribonucleoside-diphosphate reductase, alpha subunit [beta
proteobacterium CB]
gi|455439838|gb|AGG32776.1| ribonucleoside-diphosphate reductase, alpha subunit [beta
proteobacterium CB]
Length = 988
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 300/794 (37%), Positives = 449/794 (56%), Gaps = 53/794 (6%)
Query: 47 VYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK--ITKNSFSETIKDMYNY 104
+Y GV Q+ + A + + P Y+ + R+ + + K + + ++ Y+
Sbjct: 215 LYDGVPMAQVYDSAILASRTLIEKDPAYSQVTARILMHVIRKEILGREVLQGDMQAEYST 274
Query: 105 YNKR---SGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDS 161
Y + G A L+ + E + A A+ RD F+Y G +TL Y L ++
Sbjct: 275 YFAKYINEGISAELLDPRMREFDLPRLAA---ALNASRDLQFNYLGLQTLYDRYFLHIED 331
Query: 162 RVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSC 218
R +E PQ MRV++G+ ++ D A++ Y ++S F +TPTLFN+ T +PQLSSC
Sbjct: 332 RRIEMPQAFFMRVAMGLSLNELDRERRAIEFYEILSTFDFMSSTPTLFNSATTRPQLSSC 391
Query: 219 FLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQV 278
+L + DD ++GIY+ LK+ A++SK AGG+G N+RA GS+I GTNG S G+VP L+V
Sbjct: 392 YLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKGTNGKSQGVVPFLKV 450
Query: 279 FNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLF 338
NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ + W+PDLF
Sbjct: 451 VNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTSNWIPDLF 509
Query: 339 MERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEEGRAKMV-----ISARKLWFEI 393
M+RV + G+W+LF PS+ L D +G FE Y YE++ A + I A++LW ++
Sbjct: 510 MKRVMEGGEWTLFSPSNTPDLHDKFGKAFEEAYVAYEKKADAGELKPFRRIPAQQLWRKM 569
Query: 394 LNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPR 453
L ETG P++ FKD CN +S QQ++G + SSNLCTEI ++ E AVCNL S+
Sbjct: 570 LGMLFETGHPWITFKDPCNIRSPQQHIGVVHSSNLCTEITLNTNESEIAVCNLGSV---- 625
Query: 454 YVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRS 513
N++ + + S + D E+L + + L+ +ID+N+Y + R S
Sbjct: 626 -----------NLTAHMTTDASGKMILDHEKLQKTIRTAMRMLDNVIDINYYAVAKARNS 674
Query: 514 NLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYE 573
NL+HRP+G+GI G D + +P+ S EA + E + Y+A +AS ELA + G Y
Sbjct: 675 NLKHRPVGMGIMGFQDCLHMQRIPYASDEAVKFADSSMEAVCYYAYQASNELAEERGVYS 734
Query: 574 TYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMISKNGVRNSLLVAPMP 622
TY GS +GIL D + ++R +W LR I + G+RNS VA P
Sbjct: 735 TYKGSLWDRGILPQDSVALLAAERGGYLEVDSSSTMNWDGLRARIKQFGMRNSNCVAIAP 794
Query: 623 TASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYEN 682
TA+ S I+G + C EP N++ + LSGEF VVN++L++DL + GLW + + Y +
Sbjct: 795 TATISNIIGVSACIEPTFQNLFVKSNLSGEFTVVNEYLVRDLKDRGLWDEVMIADLKYFD 854
Query: 683 GSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSL 742
G++SKI +P++L+ +Y T +E++ LV+ A+ R +IDQ+QSLNI+M KL
Sbjct: 855 GTLSKIDRVPQDLRDLYATAFEVEPSWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDDT 914
Query: 743 HFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVV----CS 798
+ AW +G+KT YYLRT AA K TV + LN + N +A+ AQ + C+
Sbjct: 915 YKLAWLRGLKT-TYYLRTMAATHVEKSTVASGQLNAVSSGGGVNGTDASAAQELDGPACT 973
Query: 799 LK----NQEECMAC 808
++ EEC AC
Sbjct: 974 MRPGDAGFEECEAC 987
>gi|289208616|ref|YP_003460682.1| ribonucleoside-diphosphate reductase subunit alpha
[Thioalkalivibrio sp. K90mix]
gi|288944247|gb|ADC71946.1| ribonucleoside-diphosphate reductase, alpha subunit
[Thioalkalivibrio sp. K90mix]
Length = 964
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 308/838 (36%), Positives = 456/838 (54%), Gaps = 61/838 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V + DG + P+ ++ A + + G+ EH D + + ++ GV +
Sbjct: 155 VTRADGTQAPLDEARLQAVVAEACDGI--EHVDGEKILTEARRNLFDGVAEKDVATALVM 212
Query: 63 TAAAMTVNHPDYALLAGRV--------AVSNLH----KITKNSFSETIKDMYNYYNKRSG 110
A M P+Y+ + R+ A+S +H + T+ +E + + Y +R+
Sbjct: 213 AARVMIEKEPNYSEVTARLLMDALRREALSFVHGRPEEATQAQLAERYAEYFGAYIRRA- 271
Query: 111 KKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHM 170
A L D E+ + L AI +RD F Y G +TL Y + D E PQ
Sbjct: 272 --ADLELVDS-ELTRYDLDKLGAAIKPERDLQFTYLGLQTLYDRYFIHSDGTRFELPQAF 328
Query: 171 LMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDS 227
MRV++G+ ++ D A++ Y+L+S F +TPTLFN+GT +PQLSSC+L + DD
Sbjct: 329 FMRVAMGLAINEIDREARAIEFYNLLSSFDFMSSTPTLFNSGTLRPQLSSCYLTSVPDD- 387
Query: 228 IEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVD 287
++GIY ++ A++SK AGG+G +R G++I GTNG S G+VP L+V NDTA V+
Sbjct: 388 LDGIYSAIRDNALLSKFAGGLGNDWTRVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVN 447
Query: 288 QGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGK 347
QGG KRKGA YLE WH D+ EF++LRKN G + R D+ A W+PDLFM+RV +DG
Sbjct: 448 QGG-KRKGAVCAYLETWHIDVEEFIELRKNTGDDRRRTHDMNSANWIPDLFMKRVAEDGD 506
Query: 348 WSLFCPSDASGLADSWGIEFEHLYSQYEE-----EGRAKMVISARKLWFEILNSQIETGT 402
W+LF P++ L D G +FE Y +YEE E R + A LW ++L ETG
Sbjct: 507 WTLFSPNETPDLHDLVGTDFEKRYCEYEEKAARGELRVHKTMKAVDLWRKMLGMLFETGH 566
Query: 403 PYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPV 462
P+M FKD CN +S QQ+ G + SSNLCTEI +S +E AVCNL SI L ++ E G
Sbjct: 567 PWMTFKDPCNLRSPQQHTGVVHSSNLCTEITLNTSDDEIAVCNLGSINLAAHINEAGE-- 624
Query: 463 QSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGI 522
D ++L + L+ +ID N+Y + RRSNLRHRP+G+
Sbjct: 625 -----------------LDQDKLEQTVNTAMRMLDNVIDYNYYSVPQARRSNLRHRPVGL 667
Query: 523 GIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSK 582
GI G D L +P+ S A + E + Y+A+KAS +LA + G YE++ GS S+
Sbjct: 668 GIMGFQDALYKLRMPYASEAAVEFADTSMEAVSYYAIKASTDLAEERGRYESFPGSLWSQ 727
Query: 583 GILQVD-----------MWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILG 631
GIL +D + + R +W LR+ + K G+RNS +A PTA+ S I G
Sbjct: 728 GILPIDSVEKLAETRGDYLQMDTTQRLEWDKLRKRVKKVGMRNSNTMAIAPTATISNICG 787
Query: 632 NNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEI 691
++ EP N++ + LSGEF V+N +L++DL + LW + + Y +GSV + +
Sbjct: 788 VSQSIEPTYQNLFVKSNLSGEFTVINPYLVRDLKDRELWDEVMVNDLKYYDGSVQPLDRV 847
Query: 692 PEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGM 751
P++LKA+Y T +E+ + LV+ A+ R +IDQ+QSLN++M +P KL +L+ AW +G+
Sbjct: 848 PDDLKALYATAFELDTRWLVEAASRRQKWIDQAQSLNLYMAEPSGPKLDALYKLAWVRGL 907
Query: 752 KTGMYYLRTRAAADAIKFTV-DTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
KT YYLR+ A K TV D+S N A A CS+ + +C AC
Sbjct: 908 KT-TYYLRSMGATHVEKSTVADSSRANKLNAVSGGQQASEPEAPKACSILD-PDCEAC 963
>gi|17547524|ref|NP_520926.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia
solanacearum GMI1000]
gi|17429828|emb|CAD16512.1| putative ribonucleoside reductase 1 (large chain) oxidoreductase
protein [Ralstonia solanacearum GMI1000]
Length = 987
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 301/772 (38%), Positives = 437/772 (56%), Gaps = 49/772 (6%)
Query: 32 EHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK--- 88
E DP + ++ +Y+GV +Q+ + A A + P Y+ R+ + + +
Sbjct: 180 ESVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREIL 239
Query: 89 ---ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEI-IMKNAACLDGAIIYDRDFDFD 144
+T+ + D + + KR G A L+ D + + + K A LD + RD F+
Sbjct: 240 GEEVTQAEMAGRYADYFPQFIKR-GINAGLLDDTLAQFDLAKLGAALDAS----RDLQFN 294
Query: 145 YFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHA 201
Y G +TL Y L + + +E PQ MRV++G+ ++ D A++ Y L+S F +
Sbjct: 295 YLGLQTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAIEFYQLLSSFDFMSS 354
Query: 202 TPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSY 261
TPTLFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G N+RA GS+
Sbjct: 355 TPTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSH 413
Query: 262 IHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKE 321
I GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 414 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDD 472
Query: 322 ECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---G 378
R D+ A W+PDLFM+RV + G+W+LF PS L D G FE Y YE++ G
Sbjct: 473 RRRTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKVGKAFEAAYLGYEDKVARG 532
Query: 379 RAKMV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFS 436
K+ + A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +
Sbjct: 533 EIKLFKKMPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNT 592
Query: 437 SPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENL 496
+ E AVCNL S+ L V+ +V D L D ++L + + L
Sbjct: 593 NDSEIAVCNLGSVNL--------------VAHVVKQADGSYAL-DHDKLKKTVRTAMRML 637
Query: 497 NKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYY 556
+ +ID+N+Y ++ R SNLRHRP+G+GI G D +L +P+ + A Q E + Y
Sbjct: 638 DNVIDINYYAVKKARDSNLRHRPVGLGIMGFQDALHVLRIPYATDAAVQFADTSMEAVCY 697
Query: 557 HALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLRE 605
+A AS ELA + G Y TY GS +G+L D + +R DW LRE
Sbjct: 698 YAYWASTELAEERGRYSTYKGSLWDRGVLPQDSLKLLAQERGGYLEADLSSTMDWDGLRE 757
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLT 665
I ++G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL
Sbjct: 758 RIQQHGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLK 817
Query: 666 ELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQ 725
GLW + + Y +GS+++I IP++L+ +Y T +E++ + LV+ A+ R +IDQ+Q
Sbjct: 818 ARGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQ 877
Query: 726 SLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
SLNI+M L + AW +G+KT YYLRT A K TV LN
Sbjct: 878 SLNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTLN 928
>gi|421890673|ref|ZP_16321528.1| Ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
solanacearum K60-1]
gi|378964040|emb|CCF98276.1| Ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
solanacearum K60-1]
Length = 987
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 301/769 (39%), Positives = 436/769 (56%), Gaps = 49/769 (6%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------ 88
DP + ++ +Y+GV +Q+ + A A + P Y+ R+ + + +
Sbjct: 183 DPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREILGEE 242
Query: 89 ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEI-IMKNAACLDGAIIYDRDFDFDYFG 147
+T+ + D + + KR G A L+ D + + + K A LD + RD F+Y G
Sbjct: 243 VTQAEMAARYVDYFPQFIKR-GINAGLLDDTLAQFDLAKLGAALDAS----RDLQFNYLG 297
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPT 204
+TL Y L + + +E PQ MRV++G+ ++ D A++ Y L+S F +TPT
Sbjct: 298 LQTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAIEFYQLLSSFDFMSSTPT 357
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G N+RA GS+I G
Sbjct: 358 LFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 416
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 417 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 475
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE-GRAKMV 383
D+ A W+PDLFM+RV ++G+W+LF PS L D G FE Y YEE+ R ++
Sbjct: 476 THDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGRAFEQAYLGYEEKVARGEIT 535
Query: 384 I----SARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPE 439
+ A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI ++
Sbjct: 536 LFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDS 595
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
E AVCNL S+ L V+ LV D L D ++L + + L+ +
Sbjct: 596 EIAVCNLGSVNL--------------VAHLVQQADGSYAL-DHDKLKKTVRTAMRMLDNV 640
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
ID+N+Y ++ R SNLRHRP+G+G+ G D +L +P+ + A Q E + Y+A
Sbjct: 641 IDINYYAVKKARDSNLRHRPVGLGVMGFQDALHVLRIPYANDAAVQFADTSMEAVCYYAY 700
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMIS 608
AS ELA + G Y TY GS +GIL D + +R DW SLR I
Sbjct: 701 WASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLETDLSSTMDWDSLRGRIQ 760
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
+ G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL G
Sbjct: 761 QYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKARG 820
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LW + + Y +GS+++I IP++L+ +Y T +E++ + LV+ A+ R +IDQ+QSLN
Sbjct: 821 LWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQSLN 880
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
I+M L + AW +G+KT YYLRT A K TV LN
Sbjct: 881 IYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTLN 928
>gi|386332372|ref|YP_006028541.1| ribonucleoside reductase 1 (large chain) protein [Ralstonia
solanacearum Po82]
gi|334194820|gb|AEG68005.1| ribonucleoside reductase 1 (large chain) protein [Ralstonia
solanacearum Po82]
Length = 987
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 301/769 (39%), Positives = 436/769 (56%), Gaps = 49/769 (6%)
Query: 35 DPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK------ 88
DP + ++ +Y+GV +Q+ + A A + P Y+ R+ + + +
Sbjct: 183 DPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREILGEE 242
Query: 89 ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEI-IMKNAACLDGAIIYDRDFDFDYFG 147
+T+ + D + + KR G A L+ D + + + K A LD + RD F+Y G
Sbjct: 243 VTQAEMAARYVDYFPQFIKR-GINAGLLDDTLAQFDLAKLGAALDAS----RDLQFNYLG 297
Query: 148 FKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHATPT 204
+TL Y L + + +E PQ MRV++G+ ++ D A++ Y L+S F +TPT
Sbjct: 298 LQTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAVEFYQLLSSFDFMSSTPT 357
Query: 205 LFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHG 264
LFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G N+RA GS+I G
Sbjct: 358 LFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 416
Query: 265 TNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 417 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 475
Query: 325 ARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE-GRAKMV 383
D+ A W+PDLFM+RV ++G+W+LF PS L D G FE Y YEE+ R ++
Sbjct: 476 THDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGRAFEQAYLGYEEKVARGEIT 535
Query: 384 I----SARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPE 439
+ A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI ++
Sbjct: 536 LFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDS 595
Query: 440 ETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKI 499
E AVCNL S+ L V+ LV D L D ++L + + L+ +
Sbjct: 596 EIAVCNLGSVNL--------------VAHLVQQADGSYAL-DHDKLKKTVRTAMRMLDNV 640
Query: 500 IDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHAL 559
ID+N+Y ++ R SNLRHRP+G+G+ G D +L +P+ + A Q E + Y+A
Sbjct: 641 IDINYYAVKKARDSNLRHRPVGLGVMGFQDALHVLRIPYANEAAVQFADTSMEAVCYYAY 700
Query: 560 KASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLREMIS 608
AS ELA + G Y TY GS +GIL D + +R DW SLR I
Sbjct: 701 WASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLEADLSSTMDWDSLRGRIQ 760
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELG 668
+ G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL G
Sbjct: 761 QYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKARG 820
Query: 669 LWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLN 728
LW + + Y +GS+++I IP++L+ +Y T +E++ + LV+ A+ R +IDQ+QSLN
Sbjct: 821 LWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQSLN 880
Query: 729 IHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
I+M L + AW +G+KT YYLRT A K TV LN
Sbjct: 881 IYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTLN 928
>gi|299065647|emb|CBJ36819.1| Ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
solanacearum CMR15]
Length = 987
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 301/772 (38%), Positives = 437/772 (56%), Gaps = 49/772 (6%)
Query: 32 EHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHK--- 88
E DP + ++ +Y+GV +Q+ + A A + P Y+ R+ + + +
Sbjct: 180 ESVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREIL 239
Query: 89 ---ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEI-IMKNAACLDGAIIYDRDFDFD 144
+T+ + D + + KR G A L+ D + + + K A LD + RD F+
Sbjct: 240 GEEVTQAEMAGRYADYFPQFIKR-GINAGLLDDKLAQFDLAKLGAALDAS----RDLQFN 294
Query: 145 YFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQHWFTHA 201
Y G +TL Y L + + +E PQ MRV++G+ ++ D A++ Y L+S F +
Sbjct: 295 YLGLQTLYDRYFLHISEKRIEMPQAFFMRVAMGLSLNEIDREARAVEFYQLLSSFDFMSS 354
Query: 202 TPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSY 261
TPTLFN+GT + QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G N+RA GS+
Sbjct: 355 TPTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSH 413
Query: 262 IHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKE 321
I GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 414 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDD 472
Query: 322 ECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEEE---G 378
R D+ A W+PDLFM+RV + G+W+LF PS L D G FE Y YEE+ G
Sbjct: 473 RRRTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKVGRAFEAAYLGYEEKVARG 532
Query: 379 RAKMV--ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFS 436
K+ + A +LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTEI +
Sbjct: 533 EIKLFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNT 592
Query: 437 SPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENL 496
+ E AVCNL S+ L V+ +V D L D ++L + + L
Sbjct: 593 NDSEIAVCNLGSVNL--------------VAHVVKQADGSYAL-DHDKLKKTVRTAMRML 637
Query: 497 NKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYY 556
+ +ID+N+Y ++ R SNLRHRP+G+GI G D+ +L +P+ + A Q E + Y
Sbjct: 638 DNVIDINYYAVKKARDSNLRHRPVGLGIMGFQDSLHVLRIPYATDAAVQFADTSMEAVCY 697
Query: 557 HALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWSSLRE 605
+A AS ELA + G Y TY GS +G+L D + +R DW LR
Sbjct: 698 YAYWASTELAEERGRYSTYKGSLWDRGVLPQDSLKLLAQERGGYLEADLSSTMDWDGLRA 757
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLT 665
I ++G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L++DL
Sbjct: 758 RIQQHGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLK 817
Query: 666 ELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQ 725
GLW + + Y +GS+++I IP++L+ +Y T +E++ + LV+ A+ R +IDQ+Q
Sbjct: 818 ARGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQ 877
Query: 726 SLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
SLNI+M L + AW +G+KT YYLRT A K TV LN
Sbjct: 878 SLNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTLN 928
>gi|395796892|ref|ZP_10476185.1| ribonucleotide-diphosphate reductase subunit alpha [Pseudomonas sp.
Ag1]
gi|395338883|gb|EJF70731.1| ribonucleotide-diphosphate reductase subunit alpha [Pseudomonas sp.
Ag1]
Length = 965
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 313/839 (37%), Positives = 451/839 (53%), Gaps = 66/839 (7%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG P+ ++ + + GL E D L+ ++ +Y GV T ++ TA
Sbjct: 155 DGTFAPLDLGRLNTIITEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVMTART 212
Query: 67 MTVNHPDYALLAGRVAVSNLHK----ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
+ P+Y+ + R+ + L K + S T +M + Y K A + +E
Sbjct: 213 LVEREPNYSFVTARLLMDTLRAEGLGFLKVADSATHHEMADLYAK--ALPAYIAKGIEFE 270
Query: 123 IIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
++ A D AI ++RD F Y G +TL Y + D E PQ MRV++G
Sbjct: 271 LLNPILATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFFMRVAMG 330
Query: 178 I---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ K D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + GIY
Sbjct: 331 LAIEEKQKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSGIYHA 389
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 390 IHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 448
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+LF PS
Sbjct: 449 GAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTLFSPS 508
Query: 355 DASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPYMLFK 408
+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P++ FK
Sbjct: 509 EVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPWLTFK 568
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 569 DPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI------------- 615
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
N D +L L+ +ID+N+Y + + SN +HRP+G+GI G
Sbjct: 616 -------VNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAQNSNFKHRPVGLGIMGFQ 668
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGIL +D
Sbjct: 669 DALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGILPLD 728
Query: 589 MWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
I R DW+ +R + K G+RNS ++A PTA+ + I G ++
Sbjct: 729 SQQILIEQRGQKYIDVDLNESLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGVSQSI 787
Query: 637 EPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELK 696
EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP+ELK
Sbjct: 788 EPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELK 847
Query: 697 AIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMY 756
+Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+KT Y
Sbjct: 848 ELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKT-TY 906
Query: 757 YLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEECMAC 808
YLR AA K T++T LN + N D+ V C++ ++ +C AC
Sbjct: 907 YLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAI-DEPDCEAC 964
>gi|398854931|ref|ZP_10611441.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM80]
gi|398233190|gb|EJN19130.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM80]
Length = 964
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 312/843 (37%), Positives = 452/843 (53%), Gaps = 66/843 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+ + DG P+ ++ + + GL E D L+ ++ +Y GV T ++
Sbjct: 150 ITRADGSLAPLDMGRLNTIVTEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVM 207
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHK----ITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
TA + P+Y+ + R+ + L + S T +M + Y K A +
Sbjct: 208 TARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVAESATHHEMADLYAK--ALPAYIAKG 265
Query: 119 DVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMR 173
+E++ A D AI ++RD F Y G +TL Y + D E PQ MR
Sbjct: 266 IEFELLNPVLATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQIFFMR 325
Query: 174 VSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
V++G+ K D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + G
Sbjct: 326 VAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSG 384
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY + A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 385 IYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 444
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+L
Sbjct: 445 -KRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTL 503
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPY 404
F PS+ L D G FE Y YE G+ ++ I A+ LW ++L+ ETG P+
Sbjct: 504 FSPSEVPDLHDLTGKAFEERYEYYEALTEYPGKVRLFKTIQAKDLWRKMLSMLFETGHPW 563
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 564 LTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI--------- 614
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
N D +L L+ +ID+N+Y + + SN +HRP+G+GI
Sbjct: 615 -----------VNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGI 663
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGI
Sbjct: 664 MGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGI 723
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D I R DW+ +R + K G+RNS ++A PTA+ + I G
Sbjct: 724 LPLDSQQILIEQRGQKYIDVDLNESLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGV 782
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP
Sbjct: 783 SQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIP 842
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ELK +Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+K
Sbjct: 843 QELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLK 902
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEEC 805
T YYLR AA K T+ TS LN + N D+ V C++ ++ +C
Sbjct: 903 T-TYYLRALAATSTEKSTISTSKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAI-DEPDC 960
Query: 806 MAC 808
AC
Sbjct: 961 EAC 963
>gi|398839703|ref|ZP_10596948.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM102]
gi|398112333|gb|EJM02196.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM102]
Length = 964
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 312/843 (37%), Positives = 452/843 (53%), Gaps = 66/843 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+ + DG P+ ++ + + GL E D L+ ++ +Y GV T ++
Sbjct: 150 ITRADGSLAPLDMGRLNTIVTEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVM 207
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSF----SETIKDMYNYYNKRSGKKASLVAD 118
TA + P+Y+ + R+ + L N S T +M + Y K A +
Sbjct: 208 TARTLVEREPNYSFVTARLLMDTLRAEGLNFLGVAESATHHEMVDLYAK--ALPAYIAKG 265
Query: 119 DVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMR 173
+E++ A D AI ++RD F Y G +TL Y + D E PQ MR
Sbjct: 266 IEFELLNPVLASFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQIFFMR 325
Query: 174 VSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
V++G+ K+ D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + G
Sbjct: 326 VAMGLAIEEKNKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSG 384
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY + A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 385 IYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 444
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDG W+L
Sbjct: 445 -KRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGPWTL 503
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPY 404
F PS+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P+
Sbjct: 504 FSPSEVPDLHDLTGKAFEERYEYYEALSQYPGKIKLFKTIQAKDLWRKMLSMLFETGHPW 563
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 564 LTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI--------- 614
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
N D +L L+ +ID+N+Y + + SN +HRP+G+GI
Sbjct: 615 -----------TNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGI 663
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGI
Sbjct: 664 MGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGI 723
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D I R DW+ +R + K G+RNS ++A PTA+ + I G
Sbjct: 724 LPLDSQQILIEQRGQKYIDVDLNESLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGV 782
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP
Sbjct: 783 SQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIP 842
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ELK +Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+K
Sbjct: 843 QELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLK 902
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEEC 805
T YYLR AA K T++T LN + N D+ V C++ ++ +C
Sbjct: 903 T-TYYLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAI-DEPDC 960
Query: 806 MAC 808
AC
Sbjct: 961 EAC 963
>gi|395494496|ref|ZP_10426075.1| ribonucleotide-diphosphate reductase subunit alpha [Pseudomonas sp.
PAMC 25886]
Length = 965
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 313/839 (37%), Positives = 451/839 (53%), Gaps = 66/839 (7%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG P+ ++ + + GL E D L+ ++ +Y GV T ++ TA
Sbjct: 155 DGTFAPLDLGRLNTIITEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVMTART 212
Query: 67 MTVNHPDYALLAGRVAVSNLHK----ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
+ P+Y+ + R+ + L K + S T +M + Y K A + +E
Sbjct: 213 LVEREPNYSFVTARLLMDTLRAEGLGFLKVADSATHHEMADLYAK--ALPAYIAKGIEFE 270
Query: 123 IIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
++ A D AI ++RD F Y G +TL Y + D E PQ MRV++G
Sbjct: 271 LLNPVLATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFFMRVAMG 330
Query: 178 I---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ K D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + GIY
Sbjct: 331 LAIEEKQKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSGIYHA 389
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 390 IHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 448
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+LF PS
Sbjct: 449 GAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTLFSPS 508
Query: 355 DASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPYMLFK 408
+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P++ FK
Sbjct: 509 EVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPWLTFK 568
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 569 DPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI------------- 615
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
N D +L L+ +ID+N+Y + + SN +HRP+G+GI G
Sbjct: 616 -------VNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAQNSNFKHRPVGLGIMGFQ 668
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGIL +D
Sbjct: 669 DALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGILPLD 728
Query: 589 MWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
I R DW+ +R + K G+RNS ++A PTA+ + I G ++
Sbjct: 729 SQQILIEQRGQKYIDVDLNESLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGVSQSI 787
Query: 637 EPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELK 696
EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP+ELK
Sbjct: 788 EPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELK 847
Query: 697 AIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMY 756
+Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+KT Y
Sbjct: 848 ELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKT-TY 906
Query: 757 YLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEECMAC 808
YLR AA K T++T LN + N D+ V C++ ++ +C AC
Sbjct: 907 YLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAI-DEPDCEAC 964
>gi|452956701|gb|EME62087.1| ribonucleoside-diphosphate reductase alpha chain [Amycolatopsis
decaplanina DSM 44594]
Length = 990
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 300/793 (37%), Positives = 441/793 (55%), Gaps = 53/793 (6%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG P+ + +++ + + GL +PVL K +Y G++ +L A
Sbjct: 136 DGSLRPLDWARVSHVVGEAVAGLEDVSAEPVLAEAK--RNLYDGISADELALAQIMAARV 193
Query: 67 MTVNHPDYALLAGRV--------AVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
+ P+Y+ ++ R+ A+S L + + + + + Y Y + K+A +
Sbjct: 194 LVEQEPNYSYVSARLLADKLRGEALSYLAGVPQQASQDEMTTRYPQYFRDYLKRAIELEL 253
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG- 177
E+ + + AI +RD DF + G +TL Y + E PQ MRV++G
Sbjct: 254 VNPELQTFDLDKITAAIHAERDLDFGFLGLQTLYDRYFQHHNGVRFELPQAFFMRVAMGL 313
Query: 178 -IHKDDTDS-ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
I +DD ++ A++ Y L+S F +TPTLFN+GT +PQLSSCFL + DD ++ I+
Sbjct: 314 AIREDDREARAIEFYELLSTFHFMASTPTLFNSGTTRPQLSSCFLTTV-DDDLDSIFQAY 372
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K A+++K +GG+G +R G++I GTNG S G+VP L++ NDTA V+QGG KRKG
Sbjct: 373 KNNALLAKYSGGLGNDWTPVRGLGAHIKGTNGQSQGVVPFLKIANDTAVAVNQGG-KRKG 431
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFLDLRKN G + R D+ A WVPD F+ RV D +W+LF P++
Sbjct: 432 AACAYLETWHVDIEEFLDLRKNTGDDRRRTHDMNTANWVPDEFLRRVEADAQWTLFSPNE 491
Query: 356 ASGLADSWGIEFEHLYSQYE---EEGRAKMV--ISARKLWFEILNSQIETGTPYMLFKDS 410
L D +G F Y +YE E G K+ + A LW +L ETG P++ FKD
Sbjct: 492 TPDLHDLYGNAFAERYREYEAAAERGELKVFRKVRAVDLWRRMLTMLFETGHPWITFKDP 551
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ++G + SSNLCTEI ++ +E AVCNL S+ L ++V +G+
Sbjct: 552 CNLRSPQQHVGVVHSSNLCTEITLNTTTDEVAVCNLGSVNLLKHVTPEGL---------- 601
Query: 471 GSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADT 530
D +RL + + L+ +ID+N Y I RRSNLRHRPIG+G+ G D
Sbjct: 602 ----------DTKRLEKTVRTAVRMLDNVIDINFYTIPEARRSNLRHRPIGLGLMGFQDA 651
Query: 531 FILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGIL----- 585
+G+P S EA Q E I Y+A+ AS +LA + G Y+T+ GS SKGIL
Sbjct: 652 LFEIGVPLSSDEAVQFADTSMEHISYYAISASTDLAEERGQYQTFEGSLWSKGILPIDSM 711
Query: 586 -------QVDMWNITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
Q D ++ S DW+ LRE + G+RNS ++A PTA+ S I G + EP
Sbjct: 712 QLLIDARQGDALDVDTSSTLDWAPLRERVKTVGMRNSNVMAIAPTATISNICGVGQSIEP 771
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N++ + +SG+F VVN HL++ L E GLW + + + Y +GS+ +I +P++LKA+
Sbjct: 772 LFQNLFVKSNMSGDFTVVNPHLVRSLKERGLWDEVMVSDLKYFDGSLGQIDRVPDDLKAL 831
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +EI+ K LVD + R +IDQ+QSLN+++ P KL L+ YAW KG+KT YYL
Sbjct: 832 YATAFEIESKWLVDAGSRRQKWIDQAQSLNLYIAAPSGRKLDELYRYAWHKGLKT-TYYL 890
Query: 759 RTRAAADAIKFTV 771
R R+A K T+
Sbjct: 891 RARSATHVEKSTL 903
>gi|85714831|ref|ZP_01045817.1| ribonucleotide-diphosphate reductase alpha subunit [Nitrobacter sp.
Nb-311A]
gi|85698317|gb|EAQ36188.1| ribonucleotide-diphosphate reductase alpha subunit [Nitrobacter sp.
Nb-311A]
Length = 956
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 309/759 (40%), Positives = 421/759 (55%), Gaps = 64/759 (8%)
Query: 47 VYKGVTTTQLDELA-AETAAAMTV--NHPDYALLAGRVAVSNLHK------------ITK 91
+Y G++ +DELA A AA T+ PDYA + R+ + L + T+
Sbjct: 182 LYDGIS---VDELALAPILAARTLVETDPDYAKASARLLLDKLRREALSFVSGRSEQATQ 238
Query: 92 NSFSETIKDMYNYYNKRSGKKASLVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTL 151
+E D + Y R+G L+ ++ + L A+ +RD FDY G +TL
Sbjct: 239 AEMAERYADYFRAY-VRTGIDNELLDLEIGRFDLDR---LAAALKPERDLRFDYLGLQTL 294
Query: 152 ERSYLLKMDSRVVERPQHMLMRVSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNA 208
Y L + E PQ MRV+ G+ D + A+ Y L+S F +TPTLFNA
Sbjct: 295 YDRYFLHVRGVRFELPQAFFMRVACGLALREIDREEKAIAFYDLLSSFDFMASTPTLFNA 354
Query: 209 GTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGS 268
GT +PQLSSCFL + DD ++GI+ +K A++SK AGG+G +R G++I GTNG
Sbjct: 355 GTLRPQLSSCFLTTVADD-LDGIFKAIKDNALLSKYAGGLGNDWTRVRGLGAHIKGTNGE 413
Query: 269 SNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDL 328
S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFLDLRKN G + R D+
Sbjct: 414 SQGVVPFLKVANDTAIAVNQGG-KRKGAVCAYLETWHIDIEEFLDLRKNTGDDRRRTHDM 472
Query: 329 FYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEE-----EGRAKMV 383
A WVPDLFM RV +DG W+LF P + L D G F Y+ YEE E R
Sbjct: 473 NTANWVPDLFMRRVEEDGMWTLFSPDETPDLHDLTGKAFTERYACYEEKAARGELRVTKQ 532
Query: 384 ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAV 443
+ A LW +L ETG P++ FKD CN +S QQ+ G + SSNLCTEI +S E AV
Sbjct: 533 VRAVDLWRRMLTMLFETGHPWITFKDPCNLRSPQQHCGVVHSSNLCTEITLNTSNTEVAV 592
Query: 444 CNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVN 503
CNL S+ L +++ D K D E LA +I L+ ++DVN
Sbjct: 593 CNLGSVNLVSHIK-----------------DGK---LDHEHLARTVRIAMRMLDNVLDVN 632
Query: 504 HYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASA 563
Y I R SNLRHRP+G+G+ G D +L LP+ S A + E I Y+A+ S
Sbjct: 633 FYTIPEARTSNLRHRPVGLGVMGFQDALNILRLPYASNGAVSFADESMEAIAYYAISGSV 692
Query: 564 ELAVKDGPYETYFGSPMSKGILQVDMW-----------NITPSDRWDWSSLREMISKNGV 612
ELA + G Y +Y GS SKGIL +D +I S R DW SLRE + G+
Sbjct: 693 ELAAERGRYPSYQGSLWSKGILPLDSLTLVDEARGAAVDIDRSSRLDWDSLRESVMTIGM 752
Query: 613 RNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSH 672
RNS +A PTA+ S I G ++ EP N+Y + +SG+F VVN HL++DL GLW
Sbjct: 753 RNSNCMAIAPTATISNICGVSQSIEPAYQNLYVKSNMSGDFTVVNAHLVRDLKARGLWDE 812
Query: 673 ALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHME 732
+ + + Y +GSV +I +P++LKA+Y T +EI L+D AA R +IDQ+QSLN+++
Sbjct: 813 VMISDLKYFDGSVGQIDRVPDDLKALYATAFEIDSSWLIDAAARRQKWIDQAQSLNLYIA 872
Query: 733 QPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTV 771
P KL +L+ +AW +G+KT YYLR+R+A K T+
Sbjct: 873 NPSGKKLDALYRHAWKRGLKT-TYYLRSRSATHVEKSTL 910
>gi|421141195|ref|ZP_15601183.1| ribonucleotide-diphosphate reductase subunit alpha [Pseudomonas
fluorescens BBc6R8]
gi|404507595|gb|EKA21577.1| ribonucleotide-diphosphate reductase subunit alpha [Pseudomonas
fluorescens BBc6R8]
Length = 965
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 313/839 (37%), Positives = 451/839 (53%), Gaps = 66/839 (7%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG P+ ++ + + GL E D L+ ++ +Y GV T ++ TA
Sbjct: 155 DGTFAPLDLGRLNTIITEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVMTART 212
Query: 67 MTVNHPDYALLAGRVAVSNLHK----ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
+ P+Y+ + R+ + L K + S T +M + Y K A + +E
Sbjct: 213 LVEREPNYSFVTARLLMDTLRAEGLGFLKVADSATHHEMADLYAK--ALPAYIAKGIEFE 270
Query: 123 IIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
++ A D AI ++RD F Y G +TL Y + D E PQ MRV++G
Sbjct: 271 LLNPILATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFFMRVAMG 330
Query: 178 I---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ K D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + GIY
Sbjct: 331 LAIEEKHKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSGIYHA 389
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 390 IHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 448
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+LF PS
Sbjct: 449 GAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTLFSPS 508
Query: 355 DASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPYMLFK 408
+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P++ FK
Sbjct: 509 EVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPWLTFK 568
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 569 DPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI------------- 615
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
N D +L L+ +ID+N+Y + + SN +HRP+G+GI G
Sbjct: 616 -------VNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAQNSNFKHRPVGLGIMGFQ 668
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGIL +D
Sbjct: 669 DALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGILPLD 728
Query: 589 MWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
I R DW+ +R + K G+RNS ++A PTA+ + I G ++
Sbjct: 729 SQQILIEQRGQKYIDVDLNESLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGVSQSI 787
Query: 637 EPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELK 696
EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP+ELK
Sbjct: 788 EPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELK 847
Query: 697 AIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMY 756
+Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+KT Y
Sbjct: 848 ELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKT-TY 906
Query: 757 YLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEECMAC 808
YLR AA K T++T LN + N D+ V C++ ++ +C AC
Sbjct: 907 YLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAI-DEPDCEAC 964
>gi|189219088|ref|YP_001939729.1| Oxygen-sensitive ribonucleotide reductase, alpha subunit fused to
ATP-cone domains [Methylacidiphilum infernorum V4]
gi|189185946|gb|ACD83131.1| Oxygen-sensitive ribonucleotide reductase, alpha subunit fused to
ATP-cone domains [Methylacidiphilum infernorum V4]
Length = 942
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 313/840 (37%), Positives = 464/840 (55%), Gaps = 60/840 (7%)
Query: 1 MYVIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELA 60
+++I + GRK P+ I L + GL +E C +A++ G+Y + + +
Sbjct: 130 IHMIDKQGRKVPLDLAWIHRTLMEACRGL-EESCSWRELAEETVRGLYDEIKEEDVVQAM 188
Query: 61 AETAAAMTVNHPDYALLAGRVAVSNLHKITKN---SFSETIKDMYNYYNK--RSGKKASL 115
TA + P Y +A R+ + +++ + S ET + Y+ G K
Sbjct: 189 ILTARSWVEKEPAYTYVAARLMLGKIYEEALSLVPSIHETAEYHKAYFPSYIDFGVKIGR 248
Query: 116 VADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVS 175
++ + E N L A+ +RD F Y G + L YLL + R +E PQ+ MRV+
Sbjct: 249 LSPRLLEF---NLEKLAQALRLERDRQFSYLGLQILYDRYLLHHEERRIETPQYFWMRVA 305
Query: 176 VGI---HKDDTDS-ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGI 231
+G+ K+D + A++ Y +S+ F +TPTLFN+ T PQLSSC+LL ++DD ++GI
Sbjct: 306 MGLALNEKEDRELWAIRFYDTLSRFLFMASTPTLFNSATIHPQLSSCYLLTVEDD-LDGI 364
Query: 232 YDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGG 291
+ + A +SK AGG+G N+RA+GS I GTNG S G++P L+V NDTA V+QGG
Sbjct: 365 FKVISDNARLSKWAGGLGNDWTNVRATGSLIRGTNGKSQGVIPFLKVANDTAVAVNQGG- 423
Query: 292 KRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLF 351
KRKGA YLE WH DI +FL+LRKN G E R D+ A W+PDLFM+RV +G W+LF
Sbjct: 424 KRKGALCAYLETWHLDIEDFLELRKNTGDERRRTHDMNTANWIPDLFMKRVLQNGSWTLF 483
Query: 352 CPSDASGLADSWGIEFEHLYSQYEE---EGRAKMV--ISARKLWFEILNSQIETGTPYML 406
PSD L +G +FE Y +YE+ G K+ +SA LW ++L ETG P++
Sbjct: 484 SPSDVPDLHHLYGKDFEKRYVEYEQMADRGEIKLFKRVSAVDLWRKMLTLLFETGHPWIT 543
Query: 407 FKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNV 466
FKD N +S Q ++G I SSNLCTEI+ +SPEE AVCNL SI L ++ E G
Sbjct: 544 FKDPSNIRSPQDHVGVINSSNLCTEILLNTSPEEVAVCNLGSINLAAHLDESGE------ 597
Query: 467 SKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQG 526
D ++L E +I L+ +ID+N YPI R +NLRHRP+G+GI G
Sbjct: 598 -------------IDEKKLQETIRIAVRMLDNVIDINFYPIPEARNANLRHRPVGLGIMG 644
Query: 527 LADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQ 586
D + +P+ S +A ++ + E + YHA+ +S ELA + G Y T+ GS +G+L
Sbjct: 645 FQDVLYIKKIPYGSEKAVEVADRLMEMVSYHAILSSCELAKERGSYSTFKGSKWDRGLLP 704
Query: 587 VDMWNITPSDRW-----------DWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
+D ++ R DW +R+ I + G+RNS L+A PTA+ S I G +
Sbjct: 705 IDTIDLLEEQREGFVEVDRSQTKDWDYVRKKIKEQGLRNSCLLAIAPTATISNITGVCQS 764
Query: 636 FEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEEL 695
EP N+Y + LSG+FI +N +L+ DL +L LW + + Y +GSV I IP+EL
Sbjct: 765 IEPSYKNLYVKSNLSGDFISINPYLVADLKKLNLWDQEMIDDLKYYDGSVKPIERIPQEL 824
Query: 696 KAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
K +Y T +EI +++ A+ R +ID QSLN+++++P K++ ++ W KG+KT
Sbjct: 825 KELYATAFEIDPYFIIECASRRQKWIDMGQSLNLYVDEPSGWKISQMYILCWKKGLKT-T 883
Query: 756 YYLRTRAAADAIKFTVDTSVLN------NEKANRADNDVEANLAQV-VCSLKNQEECMAC 808
YYLR+RAA K T+D + K+ A+ VE N + CSL EC +C
Sbjct: 884 YYLRSRAATTVEKSTLDVNARGIQPRWMKSKSPSANIRVERNEKEKNACSL--DPECESC 941
>gi|408480357|ref|ZP_11186576.1| ribonucleotide-diphosphate reductase subunit alpha [Pseudomonas sp.
R81]
Length = 965
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 313/839 (37%), Positives = 451/839 (53%), Gaps = 66/839 (7%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG P+ ++ + + GL E D L+ ++ +Y GV T ++ TA
Sbjct: 155 DGTFAPLDLGRLNTIITEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVMTART 212
Query: 67 MTVNHPDYALLAGRVAVSNLHK----ITKNSFSETIKDMYNYYNKRSGKKASLVADDVYE 122
+ P+Y+ + R+ + L K + S T +M + Y K A + +E
Sbjct: 213 LVEREPNYSFVTARLLMDTLRAEGLGFLKVADSATHHEMADLYAK--ALPAYIAKGIEFE 270
Query: 123 IIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
++ A D AI ++RD F Y G +TL Y + D E PQ MRV++G
Sbjct: 271 LLNPILATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFFMRVAMG 330
Query: 178 I---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ K D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + GIY
Sbjct: 331 LAIEEKQKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSGIYHA 389
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+ A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 390 IHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 448
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+LF PS
Sbjct: 449 GAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTLFSPS 508
Query: 355 DASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPYMLFK 408
+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P++ FK
Sbjct: 509 EVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPWLTFK 568
Query: 409 DSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSK 468
D CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 569 DPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI------------- 615
Query: 469 LVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLA 528
N D +L L+ +ID+N+Y + + SN +HRP+G+GI G
Sbjct: 616 -------VNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAQNSNFKHRPVGLGIMGFQ 668
Query: 529 DTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVD 588
D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGIL +D
Sbjct: 669 DALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGILPLD 728
Query: 589 MWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
I R DW+ +R + K G+RNS ++A PTA+ + I G ++
Sbjct: 729 SQQILIEARGQKYIDVDLNETLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGVSQSI 787
Query: 637 EPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELK 696
EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP+ELK
Sbjct: 788 EPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELK 847
Query: 697 AIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMY 756
+Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+KT Y
Sbjct: 848 ELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKT-TY 906
Query: 757 YLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEECMAC 808
YLR AA K T++T LN + N D+ V C++ ++ +C AC
Sbjct: 907 YLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAI-DEPDCEAC 964
>gi|452127278|ref|ZP_21939861.1| ribonucleotide-diphosphate reductase subunit alpha [Bordetella
holmesii F627]
gi|452130649|ref|ZP_21943221.1| ribonucleotide-diphosphate reductase subunit alpha [Bordetella
holmesii H558]
gi|451920574|gb|EMD70720.1| ribonucleotide-diphosphate reductase subunit alpha [Bordetella
holmesii H558]
gi|451922373|gb|EMD72518.1| ribonucleotide-diphosphate reductase subunit alpha [Bordetella
holmesii F627]
Length = 975
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 311/840 (37%), Positives = 461/840 (54%), Gaps = 63/840 (7%)
Query: 8 GRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAM 67
G + P+ ++ A ++ GL+ E D + ++ +Y GV ++ + A A A+
Sbjct: 159 GVRRPLDMAQLRATIEAAGVGLT-EFIDTETILKETVKNLYDGVPVDEVFKSAILAARAL 217
Query: 68 TVNHPDYALLAGRVAVSNLHK------ITKNSFSETIKDMYNYYNKRSGKKASLVADDVY 121
P Y+ + R+ + + K +++ + D + + +R G +A L+ +
Sbjct: 218 VEKDPAYSQVTARLLLHTIRKEVLGQEVSQADMGQRYADYFPTFIQR-GIEAGLLDAKLA 276
Query: 122 EI-IMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHK 180
E + + A LD + RD F Y G +TL Y L + +E PQ MRV++G+
Sbjct: 277 EFDLARIARALDAS----RDLKFGYLGLQTLYDRYFLHVRGTRIELPQVFFMRVAMGLAL 332
Query: 181 DDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKK 237
+ D A++ Y ++S F +TPTLFN+GT QLSSC+L + DD +EGIYD +K+
Sbjct: 333 READREARAIEFYEILSSFDFMSSTPTLFNSGTLHSQLSSCYLTTVSDD-LEGIYDAIKE 391
Query: 238 CAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAF 297
A+++K AGG+G +RA S+I GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 392 NALLAKYAGGLGNDWTPVRALRSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRKGAV 450
Query: 298 AIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDAS 357
YLE WH DI EFL+LRKN G E R D+ A W+PD+FM+RV + G W+LF PSD
Sbjct: 451 CTYLETWHLDIEEFLELRKNTGDERRRTHDMNTANWIPDMFMKRVMEGGDWTLFSPSDCP 510
Query: 358 GLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKDSCN 412
L D +G EFE Y YE + G K+ + A LW ++L+ ETG P++ FKD CN
Sbjct: 511 DLHDKYGREFERAYLGYEAKAASGELKLFKKMPALSLWRKMLSMLFETGHPWITFKDPCN 570
Query: 413 RKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGS 472
+S QQ++G + SSNLCTEI ++ E AVCNL S+ L +++ P + +L
Sbjct: 571 IRSPQQHVGVVHSSNLCTEITLNTNESEIAVCNLGSVNLVAHMK----PTANGSFEL--- 623
Query: 473 RDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFI 532
D +++ I L+ +ID+N+Y +E R SN+RHRP+G+GI G D
Sbjct: 624 --------DHDKIKRTVSIAMRMLDNVIDINYYAVEKARNSNMRHRPVGMGIMGFQDCLH 675
Query: 533 LLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMW-- 590
++ +P+ S A + ET+ Y A AS+ LA + G Y++Y GS S+GIL D
Sbjct: 676 MMRVPYASQAAIEFADRSMETVCYQAYWASSTLAEERGRYQSYEGSLWSRGILPQDSIAM 735
Query: 591 ---------NITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTS 641
++ S DW++LR I ++G+RNS +A PTA+ S I+G + C EP
Sbjct: 736 LREERGGNVDVDESSALDWNTLRARIKEHGMRNSNCIAIAPTATISNIIGVSACIEPTFQ 795
Query: 642 NIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKT 701
N+Y + LSGEF VVN +L++DL +LGLW + + Y +GS+S+I +P EL+ +Y T
Sbjct: 796 NLYVKSNLSGEFTVVNDYLVRDLKKLGLWDEVMVADLKYFDGSLSRIDRVPAELRELYAT 855
Query: 702 VWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTR 761
+E++ LV+ AA R +IDQ+QSLNI+M KL + AW +G+KT YYLRT
Sbjct: 856 AFEVEPSWLVECAARRQKWIDQAQSLNIYMAGASGKKLDDTYKLAWQRGLKT-TYYLRTM 914
Query: 762 AAADAIKFTVDTSVLNNEKANRADNDV---------EANLAQVVCSLK----NQEECMAC 808
A A K T LN A + E + VC+++ EEC AC
Sbjct: 915 GATSAEKSTGRGGELNAVSAGNHNASASASAAPVLPEPEIVGAVCTMRPGDPGFEECEAC 974
>gi|119504229|ref|ZP_01626309.1| ribonucleotide-diphosphate reductase alpha subunit [marine gamma
proteobacterium HTCC2080]
gi|119459737|gb|EAW40832.1| ribonucleotide-diphosphate reductase alpha subunit [marine gamma
proteobacterium HTCC2080]
Length = 964
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 309/833 (37%), Positives = 459/833 (55%), Gaps = 53/833 (6%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
V+ DG +EP+ +++ + + L ++ + +Y GVT ++
Sbjct: 157 VVMPDGSREPLNIERVRTIVSEACADLVDVSESAII--DEALRNLYDGVTADEVSTSLVI 214
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHKITKNSF----SETIKDMYNYYNKRSGK---KASL 115
TA M P+Y+ +A R+ + NL + N S T DM Y++ +
Sbjct: 215 TARTMIEQDPNYSYVAARLLLDNLRAESLNYLGVAKSATQSDMAQLYSEALSAFIHQGVT 274
Query: 116 VADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVS 175
+ E++ + A L A++ +RD F Y G +TL Y + D +E PQ MRV+
Sbjct: 275 LELLSPELLEFDIAALGQALLPERDLQFSYLGLQTLYDRYFIHADEVRIELPQVFFMRVA 334
Query: 176 VG--IHKDDTDS-ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIY 232
+G I +DD ++ A++ Y L+S + +TPTLFN+GT + QLSSC+L + DD + GIY
Sbjct: 335 MGLSIREDDPNTRAIEFYQLLSSFDYMSSTPTLFNSGTLRSQLSSCYLTTVPDD-LFGIY 393
Query: 233 DTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGK 292
++ A++SK AGG+G +RA GSYI GTNG S GIVP L+V NDTA V+QGG K
Sbjct: 394 GAIQDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGIVPFLKVVNDTAVAVNQGG-K 452
Query: 293 RKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV +DG W+LF
Sbjct: 453 RKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFEDGDWTLFS 512
Query: 353 PSDASGLADSWGIEFEHLYSQYEE-----EGRAKMVISARKLWFEILNSQIETGTPYMLF 407
P+D L D +G FE Y+QYE E R + A+ +W ++L ETG P++ F
Sbjct: 513 PNDVPDLHDLYGRAFEDRYAQYEAMAASGEIRVHKTLKAQAVWRKMLGMIFETGHPWVTF 572
Query: 408 KDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVS 467
KD CN +S QQ++G + SSNLCTEI +S +E AVCNL S+ LP+++ + + N+
Sbjct: 573 KDPCNLRSPQQHVGVVHSSNLCTEITLNTSADEIAVCNLGSVNLPQHIEDGKL----NLK 628
Query: 468 KLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGL 527
KL + + R+ D +ID+N+Y + +SN+RHRPIG+GI G
Sbjct: 629 KLRATVRTAIRMLD----------------NVIDINYYSVPQAEQSNMRHRPIGLGIMGF 672
Query: 528 ADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQV 587
D + + + S A E + Y A++AS+ELA + G Y +Y GS S+G+ +
Sbjct: 673 QDALYKIDVSYASKGAVSFADQSMEAVSYFAIEASSELAAERGAYSSYEGSLWSQGVFPL 732
Query: 588 DMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D +I R +DW L+ ++K+G+RNS +A PTA+ + I G ++
Sbjct: 733 DSLDILVEQRGANYIEVNRDMTFDWPELKGRVAKHGMRNSNCMAIAPTATIANITGVSQS 792
Query: 636 FEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEEL 695
EP N+Y + LSGEF VVN +L++DL LW + + Y +GSV I IP++L
Sbjct: 793 IEPTYQNLYVKSNLSGEFTVVNPYLVRDLKARDLWDKVMVNDLKYFDGSVQSIDRIPDDL 852
Query: 696 KAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
KA Y T +EI+ + LVD A+ R +IDQ+QSLN+++ KL + AW G+KT
Sbjct: 853 KAKYSTAFEIEPRWLVDSASRRQKWIDQAQSLNLYINNASGKKLDVTYRMAWYSGLKT-T 911
Query: 756 YYLRTRAAADAIKFTVDTSVLNNEKANRADNDVEANLAQVVCSLKNQEECMAC 808
YYLR+ AA K TV++ LN + A++ + CSL + +C AC
Sbjct: 912 YYLRSLAATGTEKSTVESGKLNAVASGAAESTPQPAPVPQACSL-DDPDCEAC 963
>gi|398986356|ref|ZP_10691515.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM24]
gi|399015511|ref|ZP_10717781.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM16]
gi|398108474|gb|EJL98435.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM16]
gi|398152325|gb|EJM40846.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM24]
Length = 964
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 312/843 (37%), Positives = 452/843 (53%), Gaps = 66/843 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+ + DG P+ ++ + + GL E D L+ ++ +Y GV T ++
Sbjct: 150 ITRADGSLAPLDMGRLNTIVTEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVM 207
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHK----ITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
TA + P+Y+ + R+ + L + S T +M + Y K A +
Sbjct: 208 TARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVAESATHHEMVDLYAK--ALPAYIAKG 265
Query: 119 DVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMR 173
+E++ A D AI ++RD F Y G +TL Y + D E PQ MR
Sbjct: 266 IEFELLNPVLASFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGVRFELPQIFFMR 325
Query: 174 VSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
V++G+ K D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + G
Sbjct: 326 VAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSG 384
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY + A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 385 IYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 444
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+L
Sbjct: 445 -KRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTL 503
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPY 404
F PS+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P+
Sbjct: 504 FSPSEVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPW 563
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 564 LTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI--------- 614
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
N D +L L+ +ID+N+Y + + SN +HRP+G+GI
Sbjct: 615 -----------VNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGI 663
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGI
Sbjct: 664 MGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGI 723
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D I R DW+ +R + K G+RNS ++A PTA+ + I G
Sbjct: 724 LPLDSQQILIEARGQKYIDVDLNETLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGV 782
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP
Sbjct: 783 SQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIP 842
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ELK +Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+K
Sbjct: 843 QELKDLYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLK 902
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEEC 805
T YYLR AA K T++T LN + N D+ V C++ ++ +C
Sbjct: 903 T-TYYLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAI-DEPDC 960
Query: 806 MAC 808
AC
Sbjct: 961 EAC 963
>gi|385333390|ref|YP_005887341.1| ribonucleotide-diphosphate reductase subunit alpha [Marinobacter
adhaerens HP15]
gi|311696540|gb|ADP99413.1| ribonucleotide-diphosphate reductase subunit alpha [Marinobacter
adhaerens HP15]
Length = 921
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 287/673 (42%), Positives = 401/673 (59%), Gaps = 48/673 (7%)
Query: 121 YEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVS 175
YE++ + A D A+ +RD F + G +TL Y L + +E PQ MRV+
Sbjct: 249 YELLDEALAAFDLERLGAALQPERDLQFGFLGLQTLYDRYFLHWNKARLELPQVFFMRVA 308
Query: 176 VGI--HKDDTDS-ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIY 232
+G+ +DD ++ A++ Y+L+S + +TPTLFN+GT QLSSC+L + DD +E IY
Sbjct: 309 MGLALREDDPNARAIEFYNLLSSFDYMASTPTLFNSGTRHSQLSSCYLTTVGDD-LEDIY 367
Query: 233 DTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGK 292
++ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 368 GAIRDNAMLSKWAGGLGNDWTPVRALGSHIKGTNGQSQGVVPFLKVVNDTAVAVNQGG-K 426
Query: 293 RKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFC 352
RKGA YLE WH DI EFL+LRKN G E R D+ A WVPDL +ER+R+D W+LF
Sbjct: 427 RKGAVCAYLESWHLDIEEFLELRKNTGDERRRTHDMNTANWVPDLLIERMREDRDWTLFS 486
Query: 353 PSDASGLADSWGIEFEHLYSQYE---EEGRAKMV--ISARKLWFEILNSQIETGTPYMLF 407
PSDA L D +G F Y YE E+G+ K+ I A++LW ++L ETG P++ F
Sbjct: 487 PSDAPDLHDLYGNAFRERYEHYEALAEQGKIKLFKKIPAKQLWRKMLTVLFETGHPWITF 546
Query: 408 KDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVS 467
KD CN +S QQ+ G + SSNLCTEI +S +E AVCNL S+ L ++
Sbjct: 547 KDPCNLRSPQQHRGVVHSSNLCTEITLNTSADEIAVCNLGSVNLTAHI------------ 594
Query: 468 KLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGL 527
N D +RL + L+ +ID+N+Y + R SNL+HRP+G+GI G
Sbjct: 595 --------ANGELDVQRLEQTVNTAVRMLDNVIDINYYAVPQARNSNLKHRPVGLGIMGF 646
Query: 528 ADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQV 587
D LGLP+ SPEA + E + Y A++ASA LA + G YE+Y GS +GIL +
Sbjct: 647 QDALYQLGLPYSSPEAVEFADVAMEQLSYFAIRASATLAGERGAYESYEGSLWQQGILPI 706
Query: 588 DMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D N+ +R DWS +RE+I+ NG+RNS ++A PTA+ S I+G ++
Sbjct: 707 DSINLLKENRREGDLSVNTNARLDWSPVRELIATNGMRNSNVMAIAPTATISNIVGVSQS 766
Query: 636 FEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEEL 695
EP N++ + LSGEF VVN L++DL GLW + + + Y +GSV +I IP EL
Sbjct: 767 IEPAYQNLFVKSNLSGEFTVVNPSLVRDLKAEGLWDNVMVNDLKYFDGSVQQIDRIPNEL 826
Query: 696 KAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGM 755
KA Y T +EI + LV+ AA R ++DQ+QSLN++M +P KL +L+ AW +G+KT
Sbjct: 827 KARYATAFEIDARWLVEAAARRQKWLDQAQSLNLYMAEPSGKKLDALYQLAWERGLKT-T 885
Query: 756 YYLRTRAAADAIK 768
YYLR+ A A K
Sbjct: 886 YYLRSLGATGAEK 898
>gi|146308171|ref|YP_001188636.1| ribonucleotide-diphosphate reductase subunit alpha [Pseudomonas
mendocina ymp]
gi|145576372|gb|ABP85904.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
mendocina ymp]
Length = 968
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 307/804 (38%), Positives = 452/804 (56%), Gaps = 64/804 (7%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
DG +P+ ++ +++ GL++ D L+ ++ +Y GV ++ TA
Sbjct: 153 DGSLQPLDMGRLQTIIREACEGLAE--VDGALIERETLKNLYDGVAEKDVNTALVMTART 210
Query: 67 MTVNHPDYALLAGRVAVSNLHK-------ITKNSFSETIKDMYN-----YYNKRSGKKAS 114
+ P+Y+ + R+ + N+ IT+++ + D+Y Y +K G +
Sbjct: 211 LVEREPNYSYVTARLLMDNIRAEALTFLGITQSATHHEMVDLYAKALPAYVDK--GVEFE 268
Query: 115 LVADDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRV 174
L+ + E ++ L A+ ++RD F Y G +TL Y + D E PQ MRV
Sbjct: 269 LLDPKLKEYDLEK---LGKALNHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQVFFMRV 325
Query: 175 SVGIH----KDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
++G+ K+ D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + G
Sbjct: 326 AMGLAIEEPKNREDRAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDD-LSG 384
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY + A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 385 IYSAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 444
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV +DGKW+L
Sbjct: 445 -KRKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFEDGKWTL 503
Query: 351 FCPSDASGLADSWGIEFEHLYSQYE---EEGRAKM--VISARKLWFEILNSQIETGTPYM 405
F PS+ L D G FE Y YE E G+ K+ I A+ LW ++L+ ETG P++
Sbjct: 504 FSPSEVPDLHDLTGKAFEERYEYYEALIEYGKIKLYKTIQAKDLWRKMLSMLFETGHPWL 563
Query: 406 LFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSN 465
FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL S+ L
Sbjct: 564 TFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSVNL-------------- 609
Query: 466 VSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQ 525
V+ +V + D E+L K L+ +ID+N+Y + R SNL+HRP+G+G+
Sbjct: 610 VNHIVDGK------LDIEKLGRTVKTAVRMLDNVIDINYYSVPQARNSNLKHRPVGLGLM 663
Query: 526 GLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGIL 585
G D L + + S A + E I Y+A++AS +LA + G Y T+ GS SKGIL
Sbjct: 664 GFQDALYLQHIAYGSDAAIEFADRSMEAISYYAIQASCDLAEERGAYSTFEGSLWSKGIL 723
Query: 586 QVDMWNITP------------SDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNN 633
+D I S+ DW+ LRE + K G+RNS ++A PTA+ S I+G +
Sbjct: 724 PLDSQQILIEARGQKYIDVDLSESLDWAPLRERV-KKGIRNSNIMAIAPTATISNIIGVS 782
Query: 634 ECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPE 693
+ EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP+
Sbjct: 783 QSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKNRGLWDPVMVNDLKYYDGSVQQIERIPQ 842
Query: 694 ELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKT 753
+LK +Y T +E++ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+KT
Sbjct: 843 DLKDLYATAFEVETKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKT 902
Query: 754 GMYYLRTRAAADAIKFTVDTSVLN 777
YYLR AA K T++T LN
Sbjct: 903 -TYYLRALAATSTEKSTINTGKLN 925
>gi|399001062|ref|ZP_10703781.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM18]
gi|398128519|gb|EJM17906.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM18]
Length = 964
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 313/843 (37%), Positives = 453/843 (53%), Gaps = 66/843 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+ + DG P+ ++ + + GL E D L+ ++ +Y GV T ++
Sbjct: 150 ITRADGSLAPLDMGRLNTIVTEACEGL--EEVDGELIQRETLKNLYDGVALTDVNTALVM 207
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHK----ITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
TA + P+Y+ + R+ + L + S T +M + Y K A +
Sbjct: 208 TARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVADSATHHEMVDLYAK--ALPAYIAKG 265
Query: 119 DVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMR 173
+E++ A D AI ++RD F Y G +TL Y + D E PQ MR
Sbjct: 266 IEFELLNPVLASFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQIFFMR 325
Query: 174 VSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
V++G+ K D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + G
Sbjct: 326 VAMGLAIEEKHKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSG 384
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY + A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 385 IYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 444
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+L
Sbjct: 445 -KRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTL 503
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPY 404
F PS+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P+
Sbjct: 504 FSPSEVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPW 563
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 564 LTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHIV-------- 615
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
D K D +L L+ +ID+N+Y + + SN +HRP+G+GI
Sbjct: 616 ---------DGK---LDTAKLQRTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGI 663
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGI
Sbjct: 664 MGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGI 723
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D I R DW+ +R + K G+RNS ++A PTA+ + I G
Sbjct: 724 LPLDSQQILIEQRGQKYIDVDLNETLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGV 782
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP
Sbjct: 783 SQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIP 842
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ELK +Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+K
Sbjct: 843 QELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLK 902
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEEC 805
T YYLR AA K T++T LN + N D+ V C++ ++ +C
Sbjct: 903 T-TYYLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAI-DEPDC 960
Query: 806 MAC 808
AC
Sbjct: 961 EAC 963
>gi|187479452|ref|YP_787477.1| ribonucleotide-diphosphate reductase subunit alpha [Bordetella
avium 197N]
gi|115424039|emb|CAJ50592.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella avium
197N]
Length = 970
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 313/839 (37%), Positives = 462/839 (55%), Gaps = 57/839 (6%)
Query: 4 IKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAET 63
+ +G + P+ ++ A ++ GL+ E D + ++ +Y GV ++ + A
Sbjct: 154 VNDNGVRRPLDMAQLRATIEAAGVGLT-EFIDTETILKETVKNLYDGVPVDEVFKSAILA 212
Query: 64 AAAMTVNHPDYALLAGRVAVSNLHK------ITKNSFSETIKDMYNYYNKRSGKKASLVA 117
A A+ P Y+ + R+ + + K +++ S +E + + +R G +A L+
Sbjct: 213 ARALVEKDPAYSQVTARLLLHTIRKEVLGEEVSQASMAERYATYFPTFIQR-GIEAGLLD 271
Query: 118 DDVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
+ E ++ A A+ +RD F Y G +TL Y L + +E PQ MRV++G
Sbjct: 272 AKLAEFDLERIA---RALNANRDLQFGYLGLQTLYDRYFLHVRGTRIELPQVFFMRVAMG 328
Query: 178 IHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ ++D A++ Y ++S F +TPTLFN+GT QLSSC+L + DD +EGIYD
Sbjct: 329 LALRESDREARAIEFYEILSSFDFMSSTPTLFNSGTLHSQLSSCYLTTVSDD-LEGIYDA 387
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+K+ A+++K AGG+G +RA S+I GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 388 IKENALLAKYAGGLGNDWTPVRALRSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRK 446
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EFL+LRKN G E R D+ A W+PDLFM+RV ++G W+LF PS
Sbjct: 447 GAVCTYLETWHLDIEEFLELRKNTGDERRRTHDMNTANWIPDLFMKRVVENGDWTLFSPS 506
Query: 355 DASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKD 409
D L D +G FE Y YE + G K+ + A LW ++L+ ETG P++ FKD
Sbjct: 507 DCPDLHDKYGRAFEQAYLGYEAKAASGELKLFKKMPAISLWRKMLSMLFETGHPWITFKD 566
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
CN +S QQ++G + SSNLCTEI ++ E AVCNL S+ L +++ P + +L
Sbjct: 567 PCNIRSPQQHIGVVHSSNLCTEITLNTNESEIAVCNLGSVNLVAHMK----PSANGGYEL 622
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
D +++ I L+ +ID+N+Y +E R SNLRHRP+G+GI G D
Sbjct: 623 -----------DHDKIKHTVGIAMRMLDNVIDINYYAVEKARNSNLRHRPVGLGIMGFQD 671
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
++ +P+ S A + E + Y A AS+ LA + G Y +Y GS S+GIL D
Sbjct: 672 CLHMMRVPYASQAAIEFADRSMEAVCYQAYWASSTLAEERGRYPSYEGSLWSRGILPQDS 731
Query: 590 W-----------NITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
++ S DW +LR I +G+RNS VA PTA+ S I+G + C EP
Sbjct: 732 IAMLRDERGGNVDVDESSSLDWDTLRARIKAHGMRNSNCVAIAPTATISNIIGVSACIEP 791
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N+Y + LSGEF VVN +L++DL +LGLW + + Y +GS+S+I +P EL+ +
Sbjct: 792 TFQNLYVKSNLSGEFTVVNDYLVRDLKKLGLWDEVMVADLKYFDGSLSRIDRVPTELREL 851
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +E++ LV+ AA R +IDQ+QSLNI+M KL + AW +G+KT YYL
Sbjct: 852 YATAFEVEPSWLVECAARRQKWIDQAQSLNIYMAGASGKKLDDTYKLAWQRGLKT-TYYL 910
Query: 759 RTRAAADAIKFTVDTSVLN-----NEKANRADNDVEANLAQVVCSLK----NQEECMAC 808
RT A A K T LN N A+ A E + C+++ EEC AC
Sbjct: 911 RTMGATSAEKSTGRGGELNAVSAGNHSASAAPVLPEPEVVGAACTMRPGDPGFEECEAC 969
>gi|33598410|ref|NP_886053.1| ribonucleotide-diphosphate reductase subunit alpha [Bordetella
parapertussis 12822]
gi|33603350|ref|NP_890910.1| ribonucleotide-diphosphate reductase subunit alpha [Bordetella
bronchiseptica RB50]
gi|410474442|ref|YP_006897723.1| ribonucleoside-diphosphate reductase subunit alpha [Bordetella
parapertussis Bpp5]
gi|427816360|ref|ZP_18983424.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica 1289]
gi|33574539|emb|CAE39186.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
parapertussis]
gi|33577474|emb|CAE34739.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica RB50]
gi|408444552|emb|CCJ51310.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
parapertussis Bpp5]
gi|410567360|emb|CCN24931.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica 1289]
Length = 975
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 316/843 (37%), Positives = 464/843 (55%), Gaps = 67/843 (7%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G + P+ + A ++ GL+ ++ D + ++ +Y GV ++ + A A A
Sbjct: 158 NGVRRPLDLAALRATIEAAGEGLT-QYTDTEAILKETVKNLYDGVPVDEVFKSAILAARA 216
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIK--DMYNYYNK------RSGKKASLVAD 118
+ P Y+ + R+ LH I K E + DM Y + + G + L+
Sbjct: 217 LVEKDPAYSQVTARLL---LHTIRKEVLGEEVSQADMATRYAEYFPAFIQRGIEGGLLDA 273
Query: 119 DVYEIIMKNAA-CLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
+ E ++ A LDG RD F Y G +TL Y L + +E PQ MRV++G
Sbjct: 274 KLAEYDLERVAKALDGR----RDLQFGYLGLQTLYDRYFLHVRGTRIELPQVFFMRVAMG 329
Query: 178 IHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + D A++ Y ++S F +TPTLFN+GT QLSSC+L + DD +EGIYD
Sbjct: 330 LALREADREARAIEFYEILSSFDFMSSTPTLFNSGTLHSQLSSCYLTTVSDD-LEGIYDA 388
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+K+ A+++K AGG+G +RA S+I GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 389 IKENALLAKYAGGLGNDWTPVRALRSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRK 447
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EFL+LRKN G E R D+ A W+PDLFM+RV ++G+W+LF PS
Sbjct: 448 GAVCTYLETWHLDIEEFLELRKNTGDERRRTHDMNTANWIPDLFMKRVMENGEWTLFSPS 507
Query: 355 DASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKD 409
D L D +G FE Y+ YE + G K+ + A LW ++L+ ETG P++ FKD
Sbjct: 508 DCPDLHDKYGKAFEQAYAGYEAKVASGELKLFKKMPAVSLWRKMLSMLFETGHPWITFKD 567
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
CN +S QQ++G + SSNLCTEI ++ E AVCNL S+ L +++ P + +L
Sbjct: 568 PCNIRSPQQHVGVVHSSNLCTEITLNTNATEIAVCNLGSVNLVAHMK----PSANGGYEL 623
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
D ++L + L+ +ID+N+Y ++ R SN RHRP+G+GI G D
Sbjct: 624 -----------DHDKLKRTIGVAMRMLDNVIDINYYAVDKARNSNERHRPVGMGIMGFQD 672
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
++ +P+ S +A E + YHA AS+ELA + G Y++Y GS S+GIL D
Sbjct: 673 CLHVMRVPYASQDAIDFADRSMEAVCYHAYWASSELAQERGRYQSYEGSLWSRGILPQDT 732
Query: 590 W-----------NITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
++ S DW +LR I ++G+RNS +A PTA+ S I+G + C EP
Sbjct: 733 LAMLREERGGNVDVDDSSSLDWDTLRSRIKEHGMRNSNCIAIAPTATISNIIGVSACIEP 792
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N+Y + LSGEF VVN +L++DL +LGLW + + Y +GS+S+I +P EL+ +
Sbjct: 793 TFQNLYVKSNLSGEFTVVNDYLVRDLKKLGLWDEVMVADLKYFDGSLSRIDRVPSELRKL 852
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +E++ LV+ A+ R +IDQ+QSLNI+M KL + AW +G+KT YYL
Sbjct: 853 YATAFEVEPSWLVECASRRQKWIDQAQSLNIYMSGASGKKLDDTYKLAWQRGLKT-TYYL 911
Query: 759 RTRAAADAIKFTVDTSVLNNEKA--NRADNDV-------EANLAQVVCSLK----NQEEC 805
RT A A K T LN A + A + V E + VC+++ EEC
Sbjct: 912 RTLGATSAEKSTGRGGELNAVSAGDHGAGSAVSAAPVLPEPEIVGAVCTMRPGDPGFEEC 971
Query: 806 MAC 808
AC
Sbjct: 972 EAC 974
>gi|395763949|ref|ZP_10444618.1| ribonucleotide-diphosphate reductase subunit alpha
[Janthinobacterium lividum PAMC 25724]
Length = 984
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 303/777 (38%), Positives = 434/777 (55%), Gaps = 57/777 (7%)
Query: 28 GLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLH 87
GL K H D + + +Y GV +L + A A A+ P Y+ + R+ LH
Sbjct: 178 GLEK-HVDADAILAETVKNLYDGVPVEELHKSAILAARALMEKDPAYSQVTARIL---LH 233
Query: 88 KITKNSFSETI------KDMYNYYNKRSGKKASLVADDVYEIIMK--NAACLDGAIIYDR 139
+ K F + + + Y+ + K +A+D+ ++ + L AI+ DR
Sbjct: 234 TVRKEVFGKEVPQSAAAAEYLTYFPQYIAKG---IANDLLNPVLASFDLERLAKAIVADR 290
Query: 140 DFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS---ALKTYHLMSQH 196
D F Y G +TL Y L + +E PQ MRV++G+ ++ D A++ Y L+S
Sbjct: 291 DLQFGYIGLQTLYDRYFLHIHDVRIEMPQAFYMRVAMGLALNEADREARAIEFYSLLSSF 350
Query: 197 WFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIR 256
F +TPTLFN+GT + QLSSC+L + DD +EGIYD +K A+++K AGG+G +R
Sbjct: 351 DFMSSTPTLFNSGTLRSQLSSCYLSTVSDD-LEGIYDAIKDNALLAKYAGGLGNDWTPVR 409
Query: 257 ASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRK 316
A G++I GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFLDLRK
Sbjct: 410 ALGAHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHMDIEEFLDLRK 468
Query: 317 NQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEE 376
N G + R D+ + W+PD+FM+RV + G+W+LF PS+ L D G FE Y YE
Sbjct: 469 NTGDDRRRTHDMNTSNWIPDMFMKRVMEKGEWTLFSPSETPDLHDLVGKAFEKAYLGYEA 528
Query: 377 EGRAKMV-----ISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTE 431
+ A + I A LW ++L+ ETG P++ FKD CN +S Q ++G + SSNLCTE
Sbjct: 529 KAAAGEIRSFKKIQALDLWRKMLSMLFETGHPWITFKDPCNIRSPQSHVGVVHSSNLCTE 588
Query: 432 IVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKI 491
I + P+E AVCNL S+ +P +++E KL D +LA+ +
Sbjct: 589 ITLNTGPDEIAVCNLGSVNMPAHMKE---------GKL-----------DHVKLAKTIRT 628
Query: 492 ITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIF 551
L+ +ID+N+Y +E R SN+RHRP+G+G+ G D ++ +PF S A
Sbjct: 629 AMRMLDNVIDINYYAVEKARNSNMRHRPVGMGVMGFQDCLHMMRIPFASDAAVSFADTSM 688
Query: 552 ETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDW 600
ET+ Y+A AS ELA + G YE+Y GS +GIL D + +R DW
Sbjct: 689 ETVCYYAYLASTELAEERGRYESYAGSLWDRGILPQDSVKLLAEERGGYLEVDSSSAMDW 748
Query: 601 SSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHL 660
+ +RE I+K G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF +N +L
Sbjct: 749 TPVRERIAKFGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTEINGYL 808
Query: 661 LKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
++DL LW + + + Y +GS+ KI IP++L+ IY T +E+ LV+ A+ R +
Sbjct: 809 VRDLKARDLWDEVMISDLKYFDGSLVKIDRIPQDLRDIYATAFEVSPSWLVEAASRRQKW 868
Query: 721 IDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLN 777
IDQ+QSLNI+M KL + AW +G+KT YYLRT AA K T T LN
Sbjct: 869 IDQAQSLNIYMAGASGKKLDETYKLAWLRGLKT-TYYLRTIAATHMEKSTSKTGALN 924
>gi|398929713|ref|ZP_10664117.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM48]
gi|398166442|gb|EJM54537.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM48]
Length = 964
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 313/843 (37%), Positives = 453/843 (53%), Gaps = 66/843 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+ + DG P+ ++ + + GL E D L+ ++ +Y GV T ++
Sbjct: 150 ITRADGSLAPLDMGRLNTIVTEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVM 207
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHK----ITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
TA + P+Y+ + R+ + L + S T +M + Y K A +
Sbjct: 208 TARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVAESATHHEMVDLYAK--ALPAYIAKG 265
Query: 119 DVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMR 173
YE++ A D AI ++RD F Y G +TL Y + D E PQ MR
Sbjct: 266 IEYELLNPELASFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGVRFELPQIFFMR 325
Query: 174 VSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
V++G+ K+ A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + G
Sbjct: 326 VAMGLAIEEKEREARAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDD-LSG 384
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY + A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 385 IYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 444
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+L
Sbjct: 445 -KRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTL 503
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPY 404
F PS+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P+
Sbjct: 504 FSPSEVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPW 563
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 564 LTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHIV-------- 615
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
D K D +L L+ +ID+N+Y + + SN +HRP+G+GI
Sbjct: 616 ---------DGK---LDTAKLQRTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGI 663
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGI
Sbjct: 664 MGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGSYETFQGSLWSKGI 723
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D I R DW+ +R + K G+RNS ++A PTA+ + I G
Sbjct: 724 LPLDSQQILIEARGQKYIDVDLNETLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGV 782
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP
Sbjct: 783 SQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIP 842
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ELK +Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+K
Sbjct: 843 QELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLK 902
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEEC 805
T YYLR AA K T++T LN + N D+ V C++ ++ +C
Sbjct: 903 T-TYYLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAI-DEPDC 960
Query: 806 MAC 808
AC
Sbjct: 961 EAC 963
>gi|398862928|ref|ZP_10618510.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM78]
gi|398249538|gb|EJN34923.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM78]
Length = 964
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 313/843 (37%), Positives = 454/843 (53%), Gaps = 66/843 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+ + DG P+ ++ + + GL E D L+ ++ +Y GV T ++
Sbjct: 150 ITRADGSLAPLDMGRLNTIVTEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVM 207
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHK----ITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
TA + P+Y+ + R+ + L + S T +M + Y K A +
Sbjct: 208 TARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVAESATHHEMVDLYAK--ALPAYIAKG 265
Query: 119 DVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMR 173
+E++ A D AI ++RD F Y G +TL Y + D E PQ MR
Sbjct: 266 IEFELLNPVLADFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGVRFELPQIFFMR 325
Query: 174 VSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
V++G+ K D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + G
Sbjct: 326 VAMGLAIEEKHKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSG 384
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY + A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 385 IYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 444
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+L
Sbjct: 445 -KRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTL 503
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPY 404
F PS+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P+
Sbjct: 504 FSPSEVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPW 563
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 564 LTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI--------- 614
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
VG + D +L L+ +ID+N+Y + + SN +HRP+G+GI
Sbjct: 615 -----VGGK------LDTAKLQRTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGI 663
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGI
Sbjct: 664 MGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGI 723
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D I R DW+ +R + K G+RNS ++A PTA+ + I G
Sbjct: 724 LPLDSQQILIEARGQKYIDVDLKESLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGV 782
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP
Sbjct: 783 SQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIP 842
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ELK +Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+K
Sbjct: 843 QELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLK 902
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEEC 805
T YYLR AA K T++T LN + N D+ V C++ ++ +C
Sbjct: 903 T-TYYLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAI-DEPDC 960
Query: 806 MAC 808
AC
Sbjct: 961 EAC 963
>gi|410421826|ref|YP_006902275.1| ribonucleoside-diphosphate reductase subunit alpha [Bordetella
bronchiseptica MO149]
gi|427819864|ref|ZP_18986927.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica D445]
gi|427825137|ref|ZP_18992199.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica Bbr77]
gi|408449121|emb|CCJ60808.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica MO149]
gi|410570864|emb|CCN19065.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica D445]
gi|410590402|emb|CCN05489.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica Bbr77]
Length = 975
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 314/843 (37%), Positives = 461/843 (54%), Gaps = 67/843 (7%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G + P+ + A ++ GL+ ++ D + ++ +Y GV ++ + A A A
Sbjct: 158 NGVRRPLDLAALRATIEAAGEGLT-QYTDTEAILKETVKNLYDGVPVDEVFKSAILAARA 216
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIK--DMYNYYNK------RSGKKASLVAD 118
+ P Y+ + R+ LH I K E + DM Y + + G + L+
Sbjct: 217 LVEKDPAYSQVTARLL---LHTIRKEVLGEEVSQADMATRYAEYFPAFIQRGIEGGLLDA 273
Query: 119 DVYEIIMKNAA-CLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
+ E ++ A LDG RD F Y G +TL Y L + +E PQ MRV++G
Sbjct: 274 KLAEYDLERVAKALDGR----RDLQFGYLGLQTLYDRYFLHVRGTRIELPQVFFMRVAMG 329
Query: 178 IHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + D A++ Y ++S F +TPTLFN+GT QLSSC+L + DD +EGIYD
Sbjct: 330 LALREADREARAIEFYEILSSFDFMSSTPTLFNSGTLHSQLSSCYLTTVSDD-LEGIYDA 388
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+K+ A+++K AGG+G +RA S+I GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 389 IKENALLAKYAGGLGNDWTPVRALRSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRK 447
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EFL+LRKN G E R D+ A W+PDLFM+RV ++G+W+LF PS
Sbjct: 448 GAVCTYLETWHLDIEEFLELRKNTGDERRRTHDMNTANWIPDLFMKRVMENGEWTLFSPS 507
Query: 355 DASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKD 409
D L D +G FE Y+ YE + G K+ + A LW ++L+ ETG P++ FKD
Sbjct: 508 DCPDLHDKYGKAFEQAYAGYEAKVASGELKLFKKMPAVSLWRKMLSMLFETGHPWITFKD 567
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
CN +S QQ++G + SSNLCTEI ++ E AVCNL S+ L +++
Sbjct: 568 PCNIRSPQQHVGVVHSSNLCTEITLNTNATEIAVCNLGSVNLVAHMKPNA---------- 617
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
+ D ++L + L+ +ID+N+Y ++ R SN RHRP+G+GI G D
Sbjct: 618 -----NGGYELDHDKLKRTIGVAMRMLDNVIDINYYAVDKARNSNERHRPVGMGIMGFQD 672
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
++ +P+ S +A E + YHA AS+ELA + G Y++Y GS S+GIL D
Sbjct: 673 CLHVMRVPYASQDAIDFADRSMEAVCYHAYWASSELAQERGRYQSYEGSLWSRGILPQDT 732
Query: 590 W-----------NITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
++ S DW +LR I ++G+RNS +A PTA+ S I+G + C EP
Sbjct: 733 LAMLREERGGNVDVDDSSSLDWDTLRSRIKEHGMRNSNCIAIAPTATISNIIGVSACIEP 792
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N+Y + LSGEF VVN +L++DL +LGLW + + Y +GS+S+I +P EL+ +
Sbjct: 793 TFQNLYVKSNLSGEFTVVNDYLVRDLKKLGLWDEVMVADLKYFDGSLSRIDRVPSELRKL 852
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +E++ LV+ A+ R +IDQ+QSLNI+M KL + AW +G+KT YYL
Sbjct: 853 YATAFEVEPSWLVECASRRQKWIDQAQSLNIYMSGASGKKLDDTYKLAWQRGLKT-TYYL 911
Query: 759 RTRAAADAIKFTVDTSVLNNEKA--NRADNDV-------EANLAQVVCSLK----NQEEC 805
RT A A K T LN A + A + V E + VC+++ EEC
Sbjct: 912 RTLGATSAEKSTGRGGELNAVSAGDHGAGSAVSAAPVLPEPEIVGAVCTMRPGDPGFEEC 971
Query: 806 MAC 808
AC
Sbjct: 972 EAC 974
>gi|412341327|ref|YP_006970082.1| ribonucleoside-diphosphate reductase subunit alpha [Bordetella
bronchiseptica 253]
gi|408771161|emb|CCJ55960.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica 253]
Length = 975
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 316/843 (37%), Positives = 463/843 (54%), Gaps = 67/843 (7%)
Query: 7 DGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
+G + P+ + A ++ GL+ ++ D + ++ +Y GV ++ + A A A
Sbjct: 158 NGVRRPLDLAALRATIEAAGEGLT-QYTDTEAILKETVKNLYDGVPVDEVFKSAILAARA 216
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSFSETIK--DMYNYYNK------RSGKKASLVAD 118
+ P Y+ + R+ LH I K E + DM Y + + G + L+
Sbjct: 217 LVEKDPAYSQVTARLL---LHTIRKEVLGEEVSQADMATRYAEYFPAFIQRGIEGGLLDA 273
Query: 119 DVYEIIMKNAA-CLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVG 177
+ E ++ A LDG RD F Y G +TL Y L + +E PQ MRV++G
Sbjct: 274 KLAEYDLERVAKALDGR----RDLQFGYLGLQTLYDRYFLHVRGTRIELPQVFFMRVAMG 329
Query: 178 IHKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDT 234
+ + D A++ Y ++S F +TPTLFN+GT QLSSC+L + DD +EGIYD
Sbjct: 330 LALREADREARAIEFYEILSSFDFMSSTPTLFNSGTLHSQLSSCYLTTVSDD-LEGIYDA 388
Query: 235 LKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRK 294
+K+ A+++K AGG+G +RA S+I GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 389 IKENALLAKYAGGLGNDWTPVRALRSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRK 447
Query: 295 GAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPS 354
GA YLE WH DI EFL+LRKN G E R D+ A W+PDLFM+RV ++G+W+LF PS
Sbjct: 448 GAVCTYLETWHLDIEEFLELRKNTGDERRRTHDMNTANWIPDLFMKRVMENGEWTLFSPS 507
Query: 355 DASGLADSWGIEFEHLYSQYEEE---GRAKMV--ISARKLWFEILNSQIETGTPYMLFKD 409
D L D +G FE Y+ YE + G K+ A LW ++L+ ETG P++ FKD
Sbjct: 508 DCPDLHDKYGKAFEQAYAGYEAKVASGELKLFKKTPAVSLWRKMLSMLFETGHPWITFKD 567
Query: 410 SCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKL 469
CN +S QQ++G + SSNLCTEI ++ E AVCNL S+ L +++ P + +L
Sbjct: 568 PCNIRSPQQHVGVVHSSNLCTEITLNTNATEIAVCNLGSVNLVAHMK----PSANGGYEL 623
Query: 470 VGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
D ++L + L+ +ID+N+Y ++ R SN RHRP+G+GI G D
Sbjct: 624 -----------DHDKLKRTIGVAMRMLDNVIDINYYAVDKARNSNERHRPVGMGIMGFQD 672
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
++ +P+ S +A E + YHA AS+ELA + G Y++Y GS S+GIL D
Sbjct: 673 CLHVMRVPYASQDAIDFADRSMEAVCYHAYWASSELAQERGRYQSYEGSLWSRGILPQDT 732
Query: 590 W-----------NITPSDRWDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
++ S DW +LR I ++G+RNS +A PTA+ S I+G + C EP
Sbjct: 733 LAMLREERGGNVDVDDSSSLDWDTLRSRIKEHGMRNSNCIAIAPTATISNIIGVSACIEP 792
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N+Y + LSGEF VVN +L++DL +LGLW + + Y +GS+S+I +P EL+ +
Sbjct: 793 TFQNLYVKSNLSGEFTVVNDYLVRDLKKLGLWDEVMVADLKYFDGSLSRIDRVPSELRKL 852
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +E++ LV+ A+ R +IDQ+QSLNI+M KL + AW +G+KT YYL
Sbjct: 853 YATAFEVEPSWLVECASRRQKWIDQAQSLNIYMSGASGKKLDDTYKLAWQRGLKT-TYYL 911
Query: 759 RTRAAADAIKFTVDTSVLNNEKA--NRADNDV-------EANLAQVVCSLK----NQEEC 805
RT A A K T LN A + A + V E + VC+++ EEC
Sbjct: 912 RTLGATSAEKSTGRGGELNAVSAGDHGAGSAVSAAPVLPEPEIVGAVCTMRPGDPGFEEC 971
Query: 806 MAC 808
AC
Sbjct: 972 EAC 974
>gi|398969934|ref|ZP_10683131.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM30]
gi|398141214|gb|EJM30144.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM30]
Length = 964
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 312/843 (37%), Positives = 454/843 (53%), Gaps = 66/843 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+ + DG P+ ++ + + GL++ D L+ ++ +Y GV ++
Sbjct: 150 ITRADGSLAPLDMGRLNTIVTEACEGLAEVDGD--LIQRETLKNLYDGVALNDVNTALVM 207
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHK----ITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
TA + P+Y+ + R+ + L + + S T +M + Y K A +
Sbjct: 208 TARTLVEREPNYSFVTARLLMDTLRAEGLGFLEVAESATHHEMADLYAK--ALPAYIAKG 265
Query: 119 DVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMR 173
+E++ A D AI ++RD F Y G +TL Y + D E PQ MR
Sbjct: 266 IEFELLNPVLATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGVRFELPQIFFMR 325
Query: 174 VSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
V++G+ K D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + G
Sbjct: 326 VAMGLAIEEKQKEDRAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDD-LSG 384
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY + A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 385 IYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 444
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+L
Sbjct: 445 -KRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTL 503
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPY 404
F PS+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P+
Sbjct: 504 FSPSEVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPW 563
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 564 LTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHIV-------- 615
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
D K D +L L+ +ID+N+Y + + SN RHRP+G+GI
Sbjct: 616 ---------DGK---LDTAKLQRTVNTAVRMLDNVIDINYYSVPQAKNSNFRHRPVGLGI 663
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGI
Sbjct: 664 MGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFNGSLWSKGI 723
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D I R DW+ +R + K G+RNS ++A PTA+ + I G
Sbjct: 724 LPLDSQQILIEQRGQKYIDVDLNETLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGV 782
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP
Sbjct: 783 SQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIP 842
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ELK +Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+K
Sbjct: 843 QELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLK 902
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEEC 805
T YYLR AA K T++T LN + N D+ V C++ ++ +C
Sbjct: 903 T-TYYLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAI-DEPDC 960
Query: 806 MAC 808
AC
Sbjct: 961 EAC 963
>gi|407363232|ref|ZP_11109764.1| ribonucleotide-diphosphate reductase subunit alpha [Pseudomonas
mandelii JR-1]
Length = 964
Score = 524 bits (1349), Expect = e-145, Method: Compositional matrix adjust.
Identities = 311/843 (36%), Positives = 453/843 (53%), Gaps = 66/843 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+ + DG P+ ++ + + GL E D L+ ++ +Y GV T ++
Sbjct: 150 ITRADGSFAPLDMGRLNTIVTEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVM 207
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLH----KITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
TA + P+Y+ + R+ + L + + S T +M + Y K A +
Sbjct: 208 TARTLVEREPNYSFVTARLLMDTLRAEGLSFLEVAESATHHEMVDLYAK--ALPAYIAKG 265
Query: 119 DVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMR 173
+E++ A D AI ++RD F Y G +TL Y + D E PQ MR
Sbjct: 266 IEFELLNPVLATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQIFFMR 325
Query: 174 VSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
V++G+ K D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + G
Sbjct: 326 VAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSG 384
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY + A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 385 IYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 444
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+L
Sbjct: 445 -KRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTL 503
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPY 404
F PS+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P+
Sbjct: 504 FSPSEVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPW 563
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 564 LTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI--------- 614
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
N D +L L+ +ID+N+Y + + SN +HRP+G+GI
Sbjct: 615 -----------VNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGI 663
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGI
Sbjct: 664 MGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGI 723
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D I R DW+ +R + K G+RNS ++A PTA+ + I G
Sbjct: 724 LPLDSQQILIEQRGQKYIDVDLNESLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGV 782
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP
Sbjct: 783 SQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIP 842
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ELK +Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+K
Sbjct: 843 QELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLK 902
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEEC 805
T YYLR AA K T++T LN + N ++ V C++ ++ +C
Sbjct: 903 T-TYYLRALAATSTEKSTINTGKLNAVSSGGNHGEDSVLAAPAGPAPVPKACAI-DEPDC 960
Query: 806 MAC 808
AC
Sbjct: 961 EAC 963
>gi|388566435|ref|ZP_10152880.1| ribonucleotide-diphosphate reductase subunit alpha [Hydrogenophaga
sp. PBC]
gi|388266449|gb|EIK91994.1| ribonucleotide-diphosphate reductase subunit alpha [Hydrogenophaga
sp. PBC]
Length = 966
Score = 524 bits (1349), Expect = e-145, Method: Compositional matrix adjust.
Identities = 305/799 (38%), Positives = 450/799 (56%), Gaps = 57/799 (7%)
Query: 8 GRKEPVRFDKITARLKKLSYGLSKE-HCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAA 66
G++ P+ D +T + GL + DP++ K +Y GV ++ + A A
Sbjct: 155 GQRVPLDIDALTRLITDACAGLGADVKADPIVAETK--RNLYDGVPIDEVYKAAILAART 212
Query: 67 MTVNHPDYALLAGRVAVSNLHKITKNSF------SETIKDMYNYYNK--RSGKKASLVAD 118
+ PDY R+ LH I + +E + +Y+ + + G A L+
Sbjct: 213 LIEKDPDYTYATARLL---LHTIVREILGAEVPQAEMGQRYADYFPQFIQKGVDAELLNP 269
Query: 119 DVYEIIMKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGI 178
D+ + + L A+ +RD FDY G +TL Y L + +E PQ MRV++G+
Sbjct: 270 DMLQFDLTR---LGAALKPERDLQFDYLGLQTLYDRYFLHVRKSRIELPQAFFMRVAMGL 326
Query: 179 HKDDTDS---ALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTL 235
++ D A++ Y ++S F +TPTLFN+GT + QLSSC+L + DD ++GIY+++
Sbjct: 327 SLNEIDREARAIEFYEILSTFDFMSSTPTLFNSGTLRSQLSSCYLTTVPDD-LDGIYESI 385
Query: 236 KKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKG 295
K+ A++SK AGG+G +RA GS+I GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 386 KENALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRKG 444
Query: 296 AFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSD 355
A YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV + G+WSLF PS+
Sbjct: 445 AVCTYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVLEKGEWSLFSPSN 504
Query: 356 ASGLADSWGIEFEHLYSQYEEEGRAKMVISARK-----LWFEILNSQIETGTPYMLFKDS 410
L D +G +FE Y YEE+ + RK LW ++L+ ETG P++ FKD+
Sbjct: 505 TPDLHDKFGTDFEKAYVAYEEKAARGEIKPYRKVPASDLWRKMLSMLFETGHPWITFKDA 564
Query: 411 CNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLV 470
CN +S QQ+ G + SSNLCTEI +S ETAVCNL S+ L R+++
Sbjct: 565 CNVRSPQQHAGVVHSSNLCTEITLNTSDTETAVCNLGSVNLLRHLK-------------- 610
Query: 471 GSRDSKN-RLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLAD 529
D +N ++ D E+L + L+ +ID+N+Y ++ R SNLRHRP+G+G+ G D
Sbjct: 611 ---DGENGKVLDHEKLKKTIATAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGVMGFQD 667
Query: 530 TFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDM 589
L +P+ S EA + E + Y+A AS EL+ + G Y ++ GS KGIL D
Sbjct: 668 ALYELRVPYASNEAVEFADRSMEAVCYYAYWASTELSKERGRYSSFKGSLWDKGILPPDT 727
Query: 590 WNITPSDR-----------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
++ +R DW +LR+ I+++G+RNS VA PTA+ S I+G + EP
Sbjct: 728 LDLLAKERGGYVDVDRSSSLDWDALRQKIARDGMRNSNCVAIAPTATISNIIGVDASIEP 787
Query: 639 YTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAI 698
N+ + LSGEF V+N +L+KDL LGLW + + + +GS+ I +P+++KA+
Sbjct: 788 CFGNLSVKSNLSGEFTVINGYLVKDLKRLGLWDDVMVMDLKHFDGSLRPIDRVPQDVKAL 847
Query: 699 YKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYL 758
Y T +E++ LV+ AA R +IDQ+QSLNI+M KL + AW +G+KT YYL
Sbjct: 848 YATAFEVEPVWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDETYKLAWLRGLKT-TYYL 906
Query: 759 RTRAAADAIKFTVDTSVLN 777
RT +A K T T LN
Sbjct: 907 RTTSATQIEKSTGRTGQLN 925
>gi|398996294|ref|ZP_10699154.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM21]
gi|398127253|gb|EJM16666.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM21]
Length = 964
Score = 524 bits (1349), Expect = e-145, Method: Compositional matrix adjust.
Identities = 311/843 (36%), Positives = 452/843 (53%), Gaps = 66/843 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+ + DG P+ ++ + + GL E D L+ ++ +Y GV T ++
Sbjct: 150 ITRADGSLAPLDMGRLNTIVTEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVM 207
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLH----KITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
TA + P+Y+ + R+ + L + S T +M + Y K A +
Sbjct: 208 TARTLVEREPNYSFVTARLLMDTLRAEGLSFLNVAESATHHEMVDLYAK--ALPAYIAKG 265
Query: 119 DVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMR 173
+E++ A D AI ++RD F Y G +TL Y + D E PQ MR
Sbjct: 266 IEFELLNPVLATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQIFFMR 325
Query: 174 VSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
V++G+ K D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + G
Sbjct: 326 VAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSG 384
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY + A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 385 IYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 444
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+L
Sbjct: 445 -KRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTL 503
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPY 404
F PS+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P+
Sbjct: 504 FSPSEVPDLHDLTGKAFEERYEYYEALSEYPGKIKLFKTIQAKDLWRKMLSMLFETGHPW 563
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 564 LTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI--------- 614
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
N D +L L+ +ID+N+Y + + SN +HRP+G+GI
Sbjct: 615 -----------VNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGI 663
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGI
Sbjct: 664 MGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGI 723
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D I R DW+ +R + K G+RNS ++A PTA+ + I G
Sbjct: 724 LPLDSQQILIEQRGQKYIDVDLNESLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGV 782
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP
Sbjct: 783 SQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIP 842
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ELK +Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+K
Sbjct: 843 QELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLK 902
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEEC 805
T YYLR AA K T++T LN + N ++ V C++ ++ +C
Sbjct: 903 T-TYYLRALAATSTEKSTINTGKLNAVSSGGNHGEDSVLAAPAGPAPVPKACAI-DEPDC 960
Query: 806 MAC 808
AC
Sbjct: 961 EAC 963
>gi|215275537|sp|P0C8H9.1|RIR1_ASFWA RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
Length = 778
Score = 524 bits (1349), Expect = e-145, Method: Compositional matrix adjust.
Identities = 311/768 (40%), Positives = 443/768 (57%), Gaps = 84/768 (10%)
Query: 65 AAMTVNHPDYALLAGRVAVSNLHKITKNSFSETIKDMYNYYNKRSGKKASLVADDVYEII 124
+A+T+ H DY+ LA R++V LH+ T +SFS+ ++ ++ + S ++ +++
Sbjct: 42 SALTILHYDYSTLAARLSVYQLHQSTASSFSKAVR-------LQAAQSCSRLSPQFVDVV 94
Query: 125 MKNAACLDGAIIYDRDFDFDYFGFKTLERSYLLK-MDSRVVERPQHMLMRVSVGIHK--- 180
K A D I Y+RD+ G +T++ SYLLK D ++ERPQ MRV++ I+
Sbjct: 95 YKYKAIFDSYIDYNRDYKLSLLGIETMKNSYLLKNKDGVIMERPQDAYMRVAIMIYGMGK 154
Query: 181 -DDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCA 239
+ L TY L+SQH THA+PT+FNAGT +PQLSSCFLL + +D++E +YD +K
Sbjct: 155 VVNIKMILLTYDLLSQHIITHASPTMFNAGTKKPQLSSCFLLNV-NDNLENLYDMVKTAG 213
Query: 240 IISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAI 299
IIS GGIGL + IRA S+I G+ SNGI + + N + Y +QGG R GA+A+
Sbjct: 214 IISGGGGGIGLCLSGIRAKNSFISGSGLRSNGIQNYIMLQNASQCYANQGG-LRPGAYAV 272
Query: 300 YLEPWHADIFEFLDLRKNQGK---EECRARDLFYALWVPDLFMERVRD------DGKWSL 350
YLE WH DIF FL++ + +G+ + A +L Y LWVPDLFME + D DG+W L
Sbjct: 273 YLELWHQDIFTFLEMPRLKGQMAEQRLNAPNLKYGLWVPDLFMEILEDQIHNRGDGRWYL 332
Query: 351 FCPSDASGLADSWGIE----------FEHLYSQYEEEGRAKMVISAR---KLWFEILNSQ 397
F P A L + +E F+ LY QY E R V +A+ K WF+ +
Sbjct: 333 FSPDQAPNLHKVFDLERSQHENAHREFKKLYYQYVAEKRYTGVTTAKEIIKAWFKTV--- 389
Query: 398 IETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIV---EFSSPEETAVCNLASIALPRY 454
I+ G PY+ FKD+ NRKSN ++GTI +SNLC E+ E VCNLA++ L +
Sbjct: 390 IQVGNPYIGFKDAINRKSNLSHVGTITNSNLCIEVTIPCWEGDKAEQGVCNLAAVNLAAF 449
Query: 455 VREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSN 514
+RE G +D+ L E + +TENL+ IID +YP E TRRSN
Sbjct: 450 IRENG--------------------YDYRGLIEASGNVTENLDNIIDNGYYPTEATRRSN 489
Query: 515 LRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYET 574
+RHRPIGIG+ GLAD F L + F SPEA +++ I +YY A++ S ELA + G + +
Sbjct: 490 MRHRPIGIGVFGLADVFASLKIKFGSPEAIAMDEAIHAALYYGAMRRSIELAKEKGSHPS 549
Query: 575 YFGSPMSKGILQVDMW----NITPS-------------DRWDWSSLREMISKNGVRNSLL 617
+ GS SKG+LQ D+W ++ PS R W LR + + GVRN L
Sbjct: 550 FPGSAASKGLLQPDLWVRCGDLIPSWEERVAQTTQGVLTRKSWRQLR-LAAIQGVRNGYL 608
Query: 618 VAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTK 677
A MPTA++S G NECFEP+TSN+YTRR LSGEFIV+NK+L+ DL E+ LW+ A++ +
Sbjct: 609 TALMPTATSSNSTGKNECFEPFTSNLYTRRTLSGEFIVLNKYLIDDLKEINLWTEAIQLQ 668
Query: 678 IIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHG 737
++ GS+ I +IP E++ YKT E+ QK L AA R ++ QS SLN + +P+
Sbjct: 669 LLNAGGSIQHILDIPAEIRDRYKTSREMNQKILTKHAAARNPFVSQSMSLNYYFYEPELS 728
Query: 738 KLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKANRAD 785
++ ++ W KG+ TG YY A T + N+EKA AD
Sbjct: 729 QVLTVLVLGWKKGLTTGSYYCHFSPGAG----TQKKIIRNSEKACNAD 772
>gi|398938075|ref|ZP_10667564.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM41(2012)]
gi|398166268|gb|EJM54369.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM41(2012)]
Length = 964
Score = 524 bits (1349), Expect = e-145, Method: Compositional matrix adjust.
Identities = 310/843 (36%), Positives = 455/843 (53%), Gaps = 66/843 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+ + DG P+ ++ + + GL++ D L+ ++ +Y GV T ++
Sbjct: 150 ITRADGTFAPLDMGRLNTIVTEACEGLAEVDGD--LIQRETLKNLYDGVALTDVNTALVM 207
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLH----KITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
TA + P+Y+ + R+ + L + + S T +M + Y K A +
Sbjct: 208 TARTLVEREPNYSFVTARLLMDTLRAEGLSFLEVAESATHHEMVDLYAK--ALPAYIAKG 265
Query: 119 DVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMR 173
+E++ A D AI ++RD F Y G +TL Y + D E PQ MR
Sbjct: 266 IEFELLNPVLATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQIFFMR 325
Query: 174 VSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
V++G+ K+ D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + G
Sbjct: 326 VAMGLAIEEKNKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSG 384
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY + A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 385 IYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 444
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+L
Sbjct: 445 -KRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTL 503
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPY 404
F PS+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P+
Sbjct: 504 FSPSEVPDLHDLTGKAFEERYEYYEALSEYPGKIKLFKTIQAKDLWRKMLSMLFETGHPW 563
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 564 LTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI--------- 614
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
N D +L L+ +ID+N+Y + + SN +HRP+G+GI
Sbjct: 615 -----------TNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGI 663
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGI
Sbjct: 664 MGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGI 723
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D I R DW+ +R + K G+RNS ++A PTA+ + I G
Sbjct: 724 LPLDSQQILIEQRGQKYIDVDLNESLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGV 782
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP
Sbjct: 783 SQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIP 842
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ELK +Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+K
Sbjct: 843 QELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLK 902
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEEC 805
T YYLR AA K T++T LN + N ++ V C++ ++ +C
Sbjct: 903 T-TYYLRALAATSTEKSTINTGKLNAVSSGGNHGEDSVLAAPAGPAPVPKACAI-DEPDC 960
Query: 806 MAC 808
AC
Sbjct: 961 EAC 963
>gi|398910724|ref|ZP_10655187.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM49]
gi|398959036|ref|ZP_10677902.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM33]
gi|398145745|gb|EJM34522.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM33]
gi|398185315|gb|EJM72724.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM49]
Length = 963
Score = 524 bits (1349), Expect = e-145, Method: Compositional matrix adjust.
Identities = 313/843 (37%), Positives = 453/843 (53%), Gaps = 66/843 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+ + DG P+ ++ + + GL E D L+ ++ +Y GV T ++
Sbjct: 149 ITRADGSLAPLDMGRLNTIVTEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVM 206
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLHK----ITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
TA + P+Y+ + R+ + L + S T +M + Y K A +
Sbjct: 207 TARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVAESATHHEMVDLYAK--ALPAYIAKG 264
Query: 119 DVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMR 173
YE++ A D AI ++RD F Y G +TL Y + D E PQ MR
Sbjct: 265 IEYELLNPELASFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGVRFELPQIFFMR 324
Query: 174 VSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
V++G+ KD A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + G
Sbjct: 325 VAMGLAIEEKDREARAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDD-LSG 383
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY + A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 384 IYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 443
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+L
Sbjct: 444 -KRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTL 502
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPY 404
F PS+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P+
Sbjct: 503 FSPSEVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPW 562
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 563 LTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHIV-------- 614
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
D K D +L L+ +ID+N+Y + + SN +HRP+G+GI
Sbjct: 615 ---------DGK---LDTAKLQRTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGI 662
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGI
Sbjct: 663 MGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGSYETFQGSLWSKGI 722
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D I R DW+ +R + K G+RNS ++A PTA+ + I G
Sbjct: 723 LPLDSQQILIEARGQKYIDVDLNETLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGV 781
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP
Sbjct: 782 SQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIP 841
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ELK +Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+K
Sbjct: 842 QELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLK 901
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEEC 805
T YYLR AA K T++T LN + N ++ V C++ ++ +C
Sbjct: 902 T-TYYLRALAATSTEKSTINTGKLNAVSSGGNHGEDSVLAAPAGPAPVPKACAI-DEPDC 959
Query: 806 MAC 808
AC
Sbjct: 960 EAC 962
>gi|398879150|ref|ZP_10634252.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM67]
gi|398884202|ref|ZP_10639143.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM60]
gi|398195271|gb|EJM82321.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM60]
gi|398197511|gb|EJM84490.1| ribonucleoside-diphosphate reductase, alpha subunit [Pseudomonas
sp. GM67]
Length = 964
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 311/843 (36%), Positives = 452/843 (53%), Gaps = 66/843 (7%)
Query: 3 VIKRDGRKEPVRFDKITARLKKLSYGLSKEHCDPVLVAQKVCAGVYKGVTTTQLDELAAE 62
+ + DG P+ ++ + + GL E D L+ ++ +Y GV T ++
Sbjct: 150 ITRADGTFAPLDMGRLNTIVTEACEGL--EEVDGDLIQRETLKNLYDGVALTDVNTALVM 207
Query: 63 TAAAMTVNHPDYALLAGRVAVSNLH----KITKNSFSETIKDMYNYYNKRSGKKASLVAD 118
TA + P+Y+ + R+ + L + S T +M + Y K A +
Sbjct: 208 TARTLVEREPNYSFVTARLLMDTLRAEGLSFLNVAESATHHEMVDLYAK--ALPAYIAKG 265
Query: 119 DVYEIIMKNAACLD-----GAIIYDRDFDFDYFGFKTLERSYLLKMDSRVVERPQHMLMR 173
+E++ A D AI ++RD F Y G +TL Y + D E PQ MR
Sbjct: 266 IEFELLNPVLATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQIFFMR 325
Query: 174 VSVGI---HKDDTDSALKTYHLMSQHWFTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEG 230
V++G+ K D A++ Y+L+S + +TPTLFNAGT +PQLSSC+L + DD + G
Sbjct: 326 VAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LSG 384
Query: 231 IYDTLKKCAIISKSAGGIGLSIHNIRASGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGG 290
IY + A++SK AGG+G +RA GSYI GTNG S G+VP L+V NDTA V+QGG
Sbjct: 385 IYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG 444
Query: 291 GKRKGAFAIYLEPWHADIFEFLDLRKNQGKEECRARDLFYALWVPDLFMERVRDDGKWSL 350
KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV DDGKW+L
Sbjct: 445 -KRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTL 503
Query: 351 FCPSDASGLADSWGIEFEHLYSQYEE----EGRAKM--VISARKLWFEILNSQIETGTPY 404
F PS+ L D G FE Y YE G+ K+ I A+ LW ++L+ ETG P+
Sbjct: 504 FSPSEVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPW 563
Query: 405 MLFKDSCNRKSNQQNLGTIKSSNLCTEIVEFSSPEETAVCNLASIALPRYVREKGVPVQS 464
+ FKD CN +S QQ++G + SSNLCTEI ++ +E AVCNL SI LP ++
Sbjct: 564 LTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI--------- 614
Query: 465 NVSKLVGSRDSKNRLFDFERLAEVTKIITENLNKIIDVNHYPIETTRRSNLRHRPIGIGI 524
N D +L L+ +ID+N+Y + + SN +HRP+G+GI
Sbjct: 615 -----------VNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGI 663
Query: 525 QGLADTFILLGLPFESPEAQQLNKDIFETIYYHALKASAELAVKDGPYETYFGSPMSKGI 584
G D L +P+ S A + E + Y+A++AS +LA + G YET+ GS SKGI
Sbjct: 664 MGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGI 723
Query: 585 LQVDMWNITPSDR------------WDWSSLREMISKNGVRNSLLVAPMPTASTSQILGN 632
L +D I R DW+ +R + K G+RNS ++A PTA+ + I G
Sbjct: 724 LPLDSQQILIEQRGQKYIDVDLNESLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGV 782
Query: 633 NECFEPYTSNIYTRRVLSGEFIVVNKHLLKDLTELGLWSHALKTKIIYENGSVSKISEIP 692
++ EP N+Y + LSGEF V+N +L++DL GLW + + Y +GSV +I IP
Sbjct: 783 SQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIP 842
Query: 693 EELKAIYKTVWEIKQKTLVDMAADRGCYIDQSQSLNIHMEQPDHGKLTSLHFYAWSKGMK 752
+ELK +Y T +E+ K +VD A+ R +IDQ+QSLN+++ KL + AW +G+K
Sbjct: 843 QELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLK 902
Query: 753 TGMYYLRTRAAADAIKFTVDTSVLN--NEKANRADNDV-----EANLAQVVCSLKNQEEC 805
T YYLR AA K T++T LN + N ++ V C++ ++ +C
Sbjct: 903 T-TYYLRALAATSTEKSTINTGKLNAVSSGGNHGEDSVLAAPAGPAPVPKACAI-DEPDC 960
Query: 806 MAC 808
AC
Sbjct: 961 EAC 963
>gi|29654844|ref|NP_820536.1| ribonucleotide-diphosphate reductase subunit alpha [Coxiella
burnetii RSA 493]
gi|161831609|ref|YP_001597388.1| ribonucleotide-diphosphate reductase subunit alpha [Coxiella
burnetii RSA 331]
gi|29542112|gb|AAO91050.1| ribonucleoside-diphosphate reductase alpha chain [Coxiella burnetii
RSA 493]
gi|161763476|gb|ABX79118.1| ribonucleoside-diphosphate reductase, alpha subunit [Coxiella
burnetii RSA 331]
Length = 941
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 313/807 (38%), Positives = 454/807 (56%), Gaps = 67/807 (8%)
Query: 32 EHCDPVLVAQKVCAGVYKGVTTTQLDELAAETAAAMTVNHPDYALLAGRVAVSNLHKITK 91
E D V + ++ ++ GV + + TA + N P+Y + R+ + +L++
Sbjct: 171 EGVDAVKILEETKNNLFDGVALKDVYKGLVMTARTLVENEPNYTYVTARLLLHDLYREVL 230
Query: 92 NSFSETI----KDMYNYYNK------RSGKKASLVADDVYEIIMKNAACLDGAIIYDRDF 141
N + +D+ +YY + R G + + ++ + L A+ +RD
Sbjct: 231 NGLNLPQDLMHEDIAHYYPEAFKNFIRHGIETEHLHPNLQTFDLN---YLAQALKPERDQ 287
Query: 142 DFDYFGFKTLERSYLLKMDSRVVERPQHMLMRVSVGIHKDDTDS----ALKTYHLMSQHW 197
F Y +TL YL+ +E PQ MRV++G+ + + ++ A++ Y+++S
Sbjct: 288 QFTYLSLQTLYDRYLIHHQQVRIELPQVFFMRVAMGLAQSEGEARNQRAVEFYNVLSSFD 347
Query: 198 FTHATPTLFNAGTPQPQLSSCFLLCMKDDSIEGIYDTLKKCAIISKSAGGIGLSIHNIRA 257
F +TPTLFN+GT PQLSSCFL + D S++GIY LK A++SK AGG+G +RA
Sbjct: 348 FMSSTPTLFNSGTVFPQLSSCFLTTVPD-SLDGIYGALKDNALLSKYAGGLGNDWTPVRA 406
Query: 258 SGSYIHGTNGSSNGIVPMLQVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKN 317
G+YI GTNG S G+VP L V + TA V+QGG KRKGA YLE WH DI EFLDLRKN
Sbjct: 407 MGAYIKGTNGKSLGVVPFLNVADATAIAVNQGG-KRKGAVCAYLETWHMDIEEFLDLRKN 465
Query: 318 QGKEECRARDLFYALWVPDLFMERVRDDGKWSLFCPSDASGLADSWGIEFEHLYSQYEE- 376
G + R D+ A W+PDLFM+RV +DG+W+LF P + L D +G FE Y YEE
Sbjct: 466 TGDDRRRTHDMNTANWIPDLFMKRVFEDGQWTLFSPDEVPDLHDKFGEAFEIAYVAYEEK 525
Query: 377 ----EGRAKMVISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEI 432
E R+K ISA LW +IL+ ETG P++ FKD+CN +S QQ++G I SSNLCTEI
Sbjct: 526 AHRGEIRSK-TISALSLWRKILSMLFETGHPWVTFKDACNIRSPQQHVGVIHSSNLCTEI 584
Query: 433 VEFSSPEETAVCNLASIALPRYVREKGVPVQSNVSKLVGSRDSKNRLFDFERLAEVTKII 492
+S EE AVCNL SI L +++ D K D E+LA TK
Sbjct: 585 TLNTSREEIAVCNLGSINLVNHMK-----------------DGK---LDTEKLARTTKTA 624
Query: 493 TENLNKIIDVNHYPIETTRRSNLRHRPIGIGIQGLADTFILLGLPFESPEAQQLNKDIFE 552
L+ +ID+N+Y + R SNL+HRPIG+G+ G D L +P+ S A Q E
Sbjct: 625 IRMLDNVIDINYYSVPQARTSNLKHRPIGLGLMGFQDALYLQNIPYASEAAVQFADQSME 684
Query: 553 TIYYHALKASAELAVKDGPYETYFGSPMSKGILQVDMWNITPSDR-----------WDWS 601
TI Y+A++AS ELA + GPYET+ S S+GIL +D + R DW+
Sbjct: 685 TISYYAIQASMELAKERGPYETFNNSLWSQGILPIDSIQLLKKSRGKYFEQNTDQTLDWN 744
Query: 602 SLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLL 661
+LR+ + +G+RNS ++A PTA+ S I G ++ EP N++ + LSGEF V+N +L+
Sbjct: 745 ALRKQVVAHGMRNSNVMAIAPTATISNICGISQSIEPTYQNLFVKSNLSGEFTVINPYLV 804
Query: 662 KDLTELGLWSHALKTKIIYENGSVSKISEIPEELKAIYKTVWEIKQKTLVDMAADRGCYI 721
++L LW + + + Y NGSV KI IP ELK +Y T +E++ + LV+ A+ R +I
Sbjct: 805 RELKSRQLWDNVMVHDLKYYNGSVQKIDRIPAELKKLYATAFEVEPRWLVEAASRRQKWI 864
Query: 722 DQSQSLNIHMEQPDHGKLTSLHFYAWSKGMKTGMYYLRTRAAADAIKFTVDTSVLNNEKA 781
DQ+QSLN++M +P KL L+ AW +G+KT YYLR+ A K T+ + LN A
Sbjct: 865 DQAQSLNLYMAEPSGKKLDVLYRMAWLRGLKT-TYYLRSMGATGTEKATIHDTTLN---A 920
Query: 782 NRADNDVEANLAQVVCSLKNQEECMAC 808
N+ A C++ + +C AC
Sbjct: 921 VTGQNNPNA------CAI-DDPDCEAC 940
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,617,081,005
Number of Sequences: 23463169
Number of extensions: 538542004
Number of successful extensions: 1303278
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6123
Number of HSP's successfully gapped in prelim test: 520
Number of HSP's that attempted gapping in prelim test: 1259741
Number of HSP's gapped (non-prelim): 11682
length of query: 810
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 659
effective length of database: 8,816,256,848
effective search space: 5809913262832
effective search space used: 5809913262832
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)